Directory Name Species Common name Other species names Species Taxonomy ID Taxonomic Lineage Assembly name NCBI accession Source of assembly NCBI assembly name NCBI assembly status Assembly submission date Assembly submitter organization contig N50 (bp) scaffold N50 (bp) No. ancestral genes with intact ORF No. ancestral genes with inactivating mutations No. ancestral genes with missing sequences Nettapus_auritus__African_pygmy_goose__HLnetAur1__GCA_011076525.1 Nettapus auritus African pygmy goose 658922 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatidae incertae sedis; Nettapus HLnetAur1 GCA_011076525.1 NCBI BPBGC_Naur_1.0 Chromosome 2020-03-10 Brood Parasitic Bird Genomes Consortium 105147 26011715 -1 -1 -1 Aix_galericulata__mandarin_duck__HLaixGal1__GCA_024635365.1 Aix galericulata mandarin duck Anas galericulata 8832 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Aix HLaixGal1 GCA_024635365.1 NCBI ASM2463536v1 Scaffold 2022-08-16 Academia Sinica 77396 78198423 -1 -1 -1 Aix_sponsa__Wood_duck__HLaixSpon1__GCA_051175885.1 Aix sponsa Wood duck Anas sponsa 8833 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Aix HLaixSpon1 GCA_051175885.1 NCBI bAixSpo1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 5242973 5242973 NULL NULL NULL Amazonetta_brasiliensis__Brazilian_duck__HLamaBras1__GCA_038381965.1 Amazonetta brasiliensis Brazilian duck Anas brasiliensis 75867 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Amazonetta HLamaBras1 GCA_038381965.1 NCBI ASM3838196v1 Scaffold 2024-04-18 Iridian Genomes 38439 75223119 NULL NULL NULL Anas_acuta__Northern_pintail__HLanaAcu1__GCF_963932015.1 Anas acuta Northern pintail pintail,common pintail 28680 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaAcu1 GCF_963932015.1 NCBI bAnaAcu1.1 Chromosome 2024-02-07 WELLCOME SANGER INSTITUTE 3416933 76435830 -1 -1 -1 Anas_bahamensis__white-cheeked_pintail__HLanaBaha1__GCA_038381715.1 Anas bahamensis white-cheeked pintail 75834 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaBaha1 GCA_038381715.1 NCBI ASM3838171v1 Scaffold 2024-04-18 Iridian Genomes 9633 76845102 NULL NULL NULL Anas_bernieri__Berniers_teal__HLanaBern1__GCA_032165215.1 Anas bernieri Berniers teal Querquedula bernieri 75835 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaBern1 GCA_032165215.1 NCBI ASM3216521v1 Scaffold 2023-09-28 Iridian Genomes 42853 80193075 NULL NULL NULL Anas_capensis__Cape_teal__HLanaCape1__GCA_032357685.1 Anas capensis Cape teal cape widgeon 8837 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaCape1 GCA_032357685.1 NCBI ASM3235768v1 Scaffold 2023-10-04 Iridian Genomes 9950 64715642 NULL NULL NULL Anas_crecca__Common_teal__HLanaCrec1__GCA_036873605.1 Anas crecca Common teal Eurasian teal,European teal,Nettion crecca 75839 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaCrec1 GCA_036873605.1 NCBI ASM3687360v1 Scaffold 2024-02-26 Iridian Genomes 32370 79881237 NULL NULL NULL Anas_melleri__Mellers_duck__HLanaMell1__GCA_052075425.1 Anas melleri Mellers duck 75852 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaMell1 GCA_052075425.1 NCBI ASM5207542v1 Scaffold 2025-08-16 Iridian Genomes 1864 29552448 NULL NULL NULL Anas_platyrhynchos__Mallard__HLanaPla3__GCF_015476345.1 Anas platyrhynchos Mallard Anas domesticus,Anas boschas,mallard duck,Peking duck,Anas platyrhynchos f. domestica,domestic duck,duck,Beijing ducks,Pekin duck,mallard ducks 8839 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaPla3 GCF_015476345.1 NCBI ZJU1.0 Chromosome 2020-11-23 Zhejiang University 5679408 76269206 -1 -1 -1 Anas_zonorhyncha__Eastern_spot-billed_duck__HLanaZon1__GCA_002224875.1 Anas zonorhyncha Eastern spot-billed duck Chinese spot-billed duck,Anas poecilorhynca zonorhyncha 75864 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaZon1 GCA_002224875.1 NCBI ASM222487v1 Scaffold 2017-07-25 BGI 33496 2077029 -1 -1 -1 Anas_platyrhynchos__Mallard__HLanaPlat4A__GCA_964188345.1 Anas platyrhynchos Mallard mallard duck,Anas boschas,domestic duck,mallard ducks,Anas platyrhynchos f. domestica,duck,Pekin duck,Peking duck,Anas domesticus,Beijing ducks 8839 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas HLanaPlat4A GCA_964188345.1 NCBI bAnaPla2.hap1.1 Chromosome 2024-06-21 WELLCOME SANGER INSTITUTE 3518761 69288905 NULL NULL NULL Anas_platyrhynchos_platyrhynchos__common_mallard__HLanaPla2__GCA_002743455.1 Anas platyrhynchos platyrhynchos common mallard northern mallard,Beijing ducks,Anas domesticus,Anas boschas,mallard ducks,mallard duck,Anas platyrhynchos f. domestica,Peking duck,domestic duck,Pekin duck,duck,mallard 8840 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas; Anas platyrhynchos HLanaPla2 GCA_002743455.1 NCBI CAU_duck1.0 Chromosome 2017-11-03 China Agricultural University 88037 74988519 -1 -1 -1 Asarcornis_scutulata__White_winged_duck__HLasaScu1__GCA_013398475.1 Asarcornis scutulata White winged duck 75869 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Asarcornis HLasaScu1 GCA_013398475.1 NCBI ASM1339847v1 Scaffold 2020-07-10 B10K Consortium 91211 5635001 -1 -1 -1 Bucephala_clangula__Common_goldeneye__HLbucCla1__GCA_964059595.1 Bucephala clangula Common goldeneye Anas clangula 107022 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Bucephala HLbucCla1 GCA_964059595.1 NCBI bBucCla1.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 4272793 66356865 -1 -1 -1 Cairina_moschata_domestica__Muscovy_Duck__HLcaiMos1__GCA_009194515.1 Cairina moschata domestica Muscovy Duck Muscovy duck,muscovy,musky duck,Cairina moschata var. domesticus 1240228 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Cairina HLcaiMos1 GCA_009194515.1 NCBI CaiMos1.0 Chromosome 2019-11-25 McDonnell Genome Institute - Washington University School of Medicine 89133 2417665 -1 -1 -1 Callonetta_leucophrys__Ringed_teal__HLcalLeuc1__GCA_049176255.1 Callonetta leucophrys Ringed teal Anas leucophrys 75871 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Callonetta HLcalLeuc1 GCA_049176255.1 NCBI ASM4917625v1 Scaffold 2025-03-29 Iridian Genomes 28540 75627000 NULL NULL NULL Clangula_hyemalis__Long-tailed_duck__HLclaHyem1__GCA_963989345.1 Clangula hyemalis Long-tailed duck Anas hyemalis 197941 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Clangula HLclaHyem1 GCA_963989345.1 NCBI bClaHye2.1 Chromosome 2024-03-14 WELLCOME SANGER INSTITUTE 3738964 78069974 NULL NULL NULL Heteronetta_atricapilla__Black_headed_duck__HLhetAtr1__GCA_011075105.1 Heteronetta atricapilla Black headed duck 555264 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Heteronetta HLhetAtr1 GCA_011075105.1 NCBI BPBGC_Hatr_1.0 Chromosome 2020-03-10 Brood Parasitic Bird Genomes Consortium 151401 23364606 -1 -1 -1 Lophodytes_cucullatus__Hooded_merganser__HLlopCucu1__GCA_049176295.1 Lophodytes cucullatus Hooded merganser Mergus cucullatus 279951 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Lophodytes HLlopCucu1 GCA_049176295.1 NCBI ASM4917629v1 Scaffold 2025-03-29 Iridian Genomes 34452 75505413 NULL NULL NULL Mareca_falcata__Falcated_duck__HLmarFalc1__GCA_053567875.1 Mareca falcata Falcated duck Anas falcata 75844 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Mareca HLmarFalc1 GCA_053567875.1 NCBI SKLAFABB.AnasFal1.0 Chromosome 2025-11-18 China Agricultural University 41080195 76775030 NULL NULL NULL Mareca_strepera__Gadwall__HLmarStre1A__GCA_965278785.1 Mareca strepera Gadwall Anas strepera,Chaulelasmus streperus 75861 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Mareca HLmarStre1A GCA_965278785.1 NCBI bMarStr1.hap1.1 Chromosome 2025-05-10 WELLCOME SANGER INSTITUTE 2097805 66097916 NULL NULL NULL Mergellus_albellus__Smew__HLmerAlbe1__GCA_051254355.1 Mergellus albellus Smew Zwergsaeger,Mergus albellus 107026 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Mergellus HLmerAlbe1 GCA_051254355.1 NCBI ASM5125435v1 Scaffold 2025-07-09 Iridian Genomes 9076 38391571 NULL NULL NULL Mergus_octosetaceus__Brazilian_merganser__HLmerOcto1A__GCA_036873955.1 Mergus octosetaceus Brazilian merganser 1570318 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Mergus HLmerOcto1A GCA_036873955.1 NCBI bMerOct1.hap1 Chromosome 2024-02-26 Vertebrate Genomes Project 10800487 83836255 NULL NULL NULL Mergus_serrator__Red-breasted_merganser__HLmerSerr1A__GCA_977964035.1 Mergus serrator Red-breasted merganser 8879 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Mergus HLmerSerr1A GCA_977964035.1 NCBI bMerSer1.hap1.1 Chromosome 2026-02-01 WELLCOME SANGER INSTITUTE 2748324 65261140 NULL NULL NULL Oxyura_jamaicensis__ruddy_duck__HLoxyJam1__GCA_011077185.1 Oxyura jamaicensis ruddy duck 8884 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura HLoxyJam1 GCA_011077185.1 NCBI BPBGC_Ojam_1.0 Chromosome 2020-03-10 Brood Parasitic Bird Genomes Consortium 128592 36145614 -1 -1 -1 Somateria_mollissima__Common_eider__HLsomMoll1A__GCA_951411735.1 Somateria mollissima Common eider Anas mollissima,Somateria mollisima 76058 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Somateria HLsomMoll1A GCA_951411735.1 NCBI bSomMol1.h1.1 Chromosome 2023-06-27 EBP Norway 7862886 77552753 NULL NULL NULL Spatula_clypeata__Northern_shoveler__HLspaClyp1A__GCA_977066335.1 Spatula clypeata Northern shoveler 1758),shoveler,Anas clypeata (Linnaeus 75838 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Spatula HLspaClyp1A GCA_977066335.1 NCBI bSpaCly1.hap1.1 Chromosome 2025-11-28 WELLCOME SANGER INSTITUTE 3649032 76684505 NULL NULL NULL Anser_albifrons__White-fronted_goose__HLansAlbi1A__GCA_976913865.1 Anser albifrons White-fronted goose Branta albifrons 50365 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansAlbi1A GCA_976913865.1 NCBI bAnsAlb1.hap1.1 Chromosome 2025-10-26 WELLCOME SANGER INSTITUTE 1821908 62180537 NULL NULL NULL Anser_anser__Domestic_goose__HLansAnse1A__GCA_964211835.1 Anser anser Domestic goose Anas anser,graylag goose,greylag goose 8843 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansAnse1A GCA_964211835.1 NCBI bAnsAns1.hap1.1 Chromosome 2024-07-31 WELLCOME SANGER INSTITUTE 2674135 78965412 NULL NULL NULL Anser_brachyrhynchus__Pink-footed_goose__HLansBra1__GCA_002592135.1 Anser brachyrhynchus Pink-footed goose 132585 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansBra1 GCA_002592135.1 NCBI ASM259213v1 Scaffold 2017-10-19 Aarhus University, Denmark 97462 4974386 -1 -1 -1 Anser_brachyrhynchus__Pink-footed_goose__HLansBrac2__GCA_964034855.1 Anser brachyrhynchus Pink-footed goose 132585 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansBrac2 GCA_964034855.1 NCBI bAnsBra1.1 Chromosome 2024-04-27 WELLCOME SANGER INSTITUTE 2049950 79251119 NULL NULL NULL Anser_cygnoides__Swan_goose__HLansCyg2__GCA_013030995.1 Anser cygnoides Swan goose Chinese goose,white Chinese goose 8845 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansCyg2 GCA_013030995.1 NCBI ASM1303099v1 Scaffold 2020-05-11 Poultry Science Institute 1849874 33116532 -1 -1 -1 Anser_cygnoides__Swan_goose__HLansCygn3__GCF_040182565.1 Anser cygnoides Swan goose Anas cygnoid,white Chinese goose,Chinese goose 8845 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansCygn3 GCF_040182565.1 NCBI Taihu_goose_T2T_genome Chromosome 2024-06-14 Jiangsu Agri-animal Husbandry Vocational College 39655246 81007908 NULL NULL NULL Anser_erythropus__Lesser_white-fronted_goose__HLansEryt1A__GCA_965277985.1 Anser erythropus Lesser white-fronted goose Anas erythropus 132586 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansEryt1A GCA_965277985.1 NCBI bAnsEry1.hap1.1 Chromosome 2025-05-04 WELLCOME SANGER INSTITUTE 2382381 80247187 NULL NULL NULL Anser_fabalis__Taiga_bean_goose__HLansFaba1__GCA_965250395.1 Anser fabalis Taiga bean goose Anser albifrons fabalis,Bean goose,Saatgans,Anas fabalis 132587 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansFaba1 GCA_965250395.1 NCBI bAnsFab1.1 Chromosome 2025-04-20 WELLCOME SANGER INSTITUTE 2200672 78817196 NULL NULL NULL Anser_indicus__Bar-headed_goose__HLansInd1__GCA_006229135.1 Anser indicus Bar-headed goose Eulabia indica,Eulabeia indica 8846 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser HLansInd1 GCA_006229135.1 NCBI ASM622913v1 Scaffold 2019-06-11 State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University 120377 10094206 -1 -1 -1 Branta_canadensis__Canada_goose__HLbraCan1__GCA_006130075.1 Branta canadensis Canada goose Anser canadensis 8853 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Branta HLbraCan1 GCA_006130075.1 NCBI GSC_cangoose_1.0 Scaffold 2019-06-05 Canada's Genomic Enterprise 220846 15516710 -1 -1 -1 Branta_canadensis__Canada_goose__HLbraCana2__GCA_965231335.1 Branta canadensis Canada goose Anser canadensis,Anas canadensis 8853 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Branta HLbraCana2 GCA_965231335.1 NCBI bBraCan1.1 Chromosome 2025-03-29 WELLCOME SANGER INSTITUTE 3892771 78989891 NULL NULL NULL Branta_hutchinsii__Cackling_goose__HLbraHutc1__GCA_032270845.1 Branta hutchinsii Cackling goose Anser hutchinsii,Branta hutchinsi,Branta canadensis hutchinsii 371860 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Branta HLbraHutc1 GCA_032270845.1 NCBI ASM3227084v1 Scaffold 2023-10-02 Iridian Genomes 6334 83206430 NULL NULL NULL Branta_leucopsis__Barnacle_goose__HLbraLeuc1A__GCA_965642265.1 Branta leucopsis Barnacle goose Anas leucopsis 184711 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Branta HLbraLeuc1A GCA_965642265.1 NCBI bBraLeu2.hap1.1 Chromosome 2025-07-19 WELLCOME SANGER INSTITUTE 6988405 66377272 NULL NULL NULL Branta_ruficollis__Red-breasted_goose__HLbraRufi1__GCA_045784505.1 Branta ruficollis Red-breasted goose Anser ruficollis 184715 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Branta HLbraRufi1 GCA_045784505.1 NCBI ASM4578450v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 86252 12640046 NULL NULL NULL Branta_sandvicensis__Nene__HLbraSand1__GCA_051419555.1 Branta sandvicensis Nene Anser sandvicensis 56282 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Branta HLbraSand1 GCA_051419555.1 NCBI ASM5141955v1 Scaffold 2025-07-20 Iridian Genomes 43876 76761305 NULL NULL NULL Cygnus_atratus__black_swan__HLcygAtr1__GCA_013377495.1 Cygnus atratus black swan 8868 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus HLcygAtr1 GCA_013377495.1 NCBI Cygnus_atratus_primary_v1.0 Contig 2020-06-30 The University of Queensland 12814145 12814145 -1 -1 -1 Cygnus_atratus__Black_swan__HLcygAtr2__GCF_013377495.2 Cygnus atratus Black swan Anas atrata 8868 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus HLcygAtr2 GCF_013377495.2 NCBI CAtr_DNAZoo_HiC_assembly Chromosome 2022-08-03 The University of Queensland 28995010 84552148 -1 -1 -1 Cygnus_buccinator__trumperter_swan__HLcygBuc1__GCA_019232035.1 Cygnus buccinator trumperter swan 48397 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus HLcygBuc1 GCA_019232035.1 NCBI ASM1923203v1 Scaffold 2021-07-15 United States Geological Survey 156610 38071269 -1 -1 -1 Cygnus_columbianus__Tundra_swan__HLcygColu1__GCA_965151615.1 Cygnus columbianus Tundra swan Anas columbianus,Olor columbianus,whistling swan 110926 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus HLcygColu1 GCA_965151615.1 NCBI bCygCol1.1 Chromosome 2025-02-15 WELLCOME SANGER INSTITUTE 3838603 78162771 NULL NULL NULL Cygnus_cygnus__Common_whooper__HLcygCygn1A__GCA_965278775.1 Cygnus cygnus Common whooper Anas cygnus 219595 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus HLcygCygn1A GCA_965278775.1 NCBI bCygCyg1.hap1.1 Chromosome 2025-05-10 WELLCOME SANGER INSTITUTE 2482267 65831537 NULL NULL NULL Cygnus_olor__mute_swan__HLcygOlo1__GCA_009769625.1 Cygnus olor mute swan 8869 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus HLcygOlo1 GCA_009769625.1 NCBI bCygOlo1.pri Chromosome 2019-12-23 Vertebrate Genomes Project 7743145 81035313 -1 -1 -1 Aythya_americana__Redhead__HLaytAmer1__GCA_049176275.1 Aythya americana Redhead Nyroca americana,Aristonetta americana,Marila americana,Fuligula americana 30385 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya HLaytAmer1 GCA_049176275.1 NCBI ASM4917627v1 Scaffold 2025-03-29 Iridian Genomes 23270 75991457 NULL NULL NULL Aythya_baeri__Baers_pochard__HLaytBaer1__GCA_026413565.1 Aythya baeri Baers pochard Anas baeri,Aythya nyroca baeri 1177618 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya HLaytBaer1 GCA_026413565.1 NCBI ASM2641356v1 Chromosome 2022-11-27 Collage of Life Science 29098202 85749954 NULL NULL NULL Aythya_ferina__Common_pochard__HLaytFeri1A__GCA_964211825.1 Aythya ferina Common pochard Anas ferina,pochard 219593 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya HLaytFeri1A GCA_964211825.1 NCBI bAytFer1.hap1.1 Chromosome 2024-07-31 WELLCOME SANGER INSTITUTE 4150808 79844515 NULL NULL NULL Aythya_fuligula__tufted_duck__HLaytFul1__GCA_009819795.1 Aythya fuligula tufted duck 219594 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya HLaytFul1 GCA_009819795.1 NCBI bAytFul2.pri Chromosome 2019-12-31 Vertebrate Genomes Project 17816505 85905639 -1 -1 -1 Aythya_marila__Greater_scaup__HLaytMari1A__GCA_965140915.1 Aythya marila Greater scaup Anas marila 189534 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya HLaytMari1A GCA_965140915.1 NCBI bAytMar2.hap1.1 Chromosome 2025-02-13 WELLCOME SANGER INSTITUTE 3182246 77037309 NULL NULL NULL Aythya_nyroca__Ferruginous_duck__HLaytNyro1__GCA_052075125.1 Aythya nyroca Ferruginous duck Anas nyroca 197939 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya HLaytNyro1 GCA_052075125.1 NCBI ASM5207512v1 Scaffold 2025-08-16 Iridian Genomes 6932 76982613 NULL NULL NULL Netta_peposaca__Rosy-billed_pochard__HLnetPepo1__GCA_051419195.1 Netta peposaca Rosy-billed pochard Anas peposaca 541013 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Netta HLnetPepo1 GCA_051419195.1 NCBI ASM5141919v1 Scaffold 2025-07-20 Iridian Genomes 15217 75817134 NULL NULL NULL Netta_rufina__Red-crested_pochard__HLnetRuf1__GCA_964035555.1 Netta rufina Red-crested pochard Anas rufina 30387 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Netta HLnetRuf1 GCA_964035555.1 NCBI bNetRuf1.1 Chromosome 2024-04-29 WELLCOME SANGER INSTITUTE 3347974 77261329 -1 -1 -1 Netta_erythrophthalma__Southern_pochard__HLnetEryt1__GCA_057588075.1 Netta erythrophthalma Southern pochard Anas erythrophthalma 658921 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Netta HLnetEryt1 GCA_057588075.1 NCBI ASM5758807v1 Scaffold 2026-05-16 Iridian Genomes 1461 87474930 NULL NULL NULL Dendrocygna_arborea__Black-billed_whistling-duck__HLdenArbo1__GCA_049176575.1 Dendrocygna arborea Black-billed whistling-duck Anas arborea,West Indian tree duck 8871 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Dendrocygninae; Dendrocygna HLdenArbo1 GCA_049176575.1 NCBI ASM4917657v1 Scaffold 2025-03-29 Iridian Genomes 42527 77598070 NULL NULL NULL Dendrocygna_autumnalis__Black-bellied_whistling-duck__HLdenAutu1__GCA_048604525.1 Dendrocygna autumnalis Black-bellied whistling-duck red-billed whistling-duck,black-bellied tree duck,Anas autumnalis 8873 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Dendrocygninae; Dendrocygna HLdenAutu1 GCA_048604525.1 NCBI ASM4860452v1 Scaffold 2025-03-18 Iridian Genomes 31645 66240164 NULL NULL NULL Dendrocygna_bicolor__Fulvous_whistling-duck__HLdenBico1__GCA_051419595.1 Dendrocygna bicolor Fulvous whistling-duck fulvous tree duck,Anas bicolor 8874 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Dendrocygninae; Dendrocygna HLdenBico1 GCA_051419595.1 NCBI ASM5141959v1 Scaffold 2025-07-20 Iridian Genomes 22455 77754676 NULL NULL NULL Dendrocygna_viduata__White-faced_whistling-duck__HLdenVidu1__GCA_051419395.1 Dendrocygna viduata White-faced whistling-duck white-faced tree duck,Anas viduata,Dendrocygna viduata viduata 8876 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Dendrocygninae; Dendrocygna HLdenVidu1 GCA_051419395.1 NCBI ASM5141939v1 Scaffold 2025-07-20 Iridian Genomes 13425 77497130 NULL NULL NULL Stictonetta_naevosa__freckled_duck__HLstiNae1__GCA_011074415.1 Stictonetta naevosa freckled duck 45637 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Stictonettinae; Stictonetta HLstiNae1 GCA_011074415.1 NCBI BPBGC_Snae_1.0 Chromosome 2020-03-10 Brood Parasitic Bird Genomes Consortium 136958 10707530 -1 -1 -1 Alopochen_aegyptiaca__Egyptian_goose__HLaloAegy1A__GCA_965278175.1 Alopochen aegyptiaca Egyptian goose Anas aegyptiaca,Alopochen aegyptiacus 30382 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Tadorninae; Alopochen HLaloAegy1A GCA_965278175.1 NCBI bAloAeg2.hap1.1 Chromosome 2025-05-08 WELLCOME SANGER INSTITUTE 4748427 79723726 NULL NULL NULL Tadorna_tadorna__Common_shelduck__HLtadTado1__GCA_045784645.1 Tadorna tadorna Common shelduck Anas tadorna 75865 Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Tadorninae; Tadorna HLtadTado1 GCA_045784645.1 NCBI ASM4578464v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 168683 6647627 NULL NULL NULL Chauna_torquata__southern_screamer__HLchaTor1__GCA_013399475.1 Chauna torquata southern screamer 30388 Aves; Neognathae; Galloanserae; Anseriformes; Anhimidae; Chauna HLchaTor1 GCA_013399475.1 NCBI ASM1339947v1 Scaffold 2020-07-10 B10K Consortium 39550 232486 -1 -1 -1 Anseranas_semipalmata__magpie_goose__HLansSem1__GCA_013399115.1 Anseranas semipalmata magpie goose 8851 Aves; Neognathae; Galloanserae; Anseriformes; Anseranatidae; Anseranas HLansSem1 GCA_013399115.1 NCBI ASM1339911v1 Scaffold 2020-07-10 B10K Consortium 53214 628312 -1 -1 -1 Penelope_pileata__White-crested_guan__HLpenPil1__GCA_013396635.1 Penelope pileata White-crested guan 1118817 Aves; Neognathae; Galloanserae; Galliformes; Cracidae; Penelope HLpenPil1 GCA_013396635.1 NCBI ASM1339663v1 Scaffold 2020-07-10 B10K Consortium 84123 732582 -1 -1 -1 Alectura_lathami__Australian_brush-turkey__HLaleLath1__GCA_013399715.1 Alectura lathami Australian brush-turkey 81907 Aves; Neognathae; Galloanserae; Galliformes; Megapodiidae; Alectura HLaleLath1 GCA_013399715.1 NCBI ASM1339971v1 Scaffold 2020-07-10 B10K Consortium 18430 229397 NULL NULL NULL Numida_meleagris__helmeted_guineafowl__HLnumMel2__GCA_014595935.1 Numida meleagris helmeted guineafowl 8996 Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida HLnumMel2 GCA_014595935.1 NCBI HGFv1 Scaffold 2020-09-15 Kunming Institute of Zoology, Chinese Academy of Sciences 14170429 98083000 -1 -1 -1 Callipepla_squamata__scaled_quail__HLcalSqu1__GCA_002218305.1 Callipepla squamata scaled quail 9009 Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Callipepla HLcalSqu1 GCA_002218305.1 NCBI ASM221830v1 Scaffold 2017-07-13 Texas A&M University 154132 1035259 -1 -1 -1 Callipepla_californica_brunnescens__California_quail__HLcalCalBru1__GCA_023055725.1 Callipepla californica brunnescens California quail Tetrao californicus,Lophortyx californica 2893758 Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Callipepla; Callipepla californica HLcalCalBru1 GCA_023055725.1 NCBI bCalCai1.0.a Scaffold 2022-04-19 UCLA 3481594 12585889 -1 -1 -1 Colinus_virginianus__northern_bobwhite__HLcolVir2__GCA_008692595.1 Colinus virginianus northern bobwhite common bobwhite,bobwhite quail 9014 Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Colinus HLcolVir2 GCA_008692595.1 NCBI Cv_LA_1.0 Scaffold 2019-10-07 Louisiana State University 136674 66809948 -1 -1 -1 Cyrtonyx_montezumae__Montezuma_quail__HLcyrMon1__GCF_038088225.1 Cyrtonyx montezumae Montezuma quail Ortyx montezumae,Mearns's quail 9017 Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Cyrtonyx HLcyrMon1 GCF_038088225.1 NCBI pur_monq_1.0 Scaffold 2024-04-12 Purdue University 8147501 36229164 -1 -1 -1 Odontophorus_gujanensis__marbled_wood_quail__HLodoGuj1__GCA_013399175.1 Odontophorus gujanensis marbled wood quail Tetrao gujanensis 886794 Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Odontophorus HLodoGuj1 GCA_013399175.1 NCBI ASM1339917v1 Scaffold 2020-07-10 B10K Consortium 74578 343789 -1 -1 -1 Oreortyx_pictus__Mountain_quail__HLorePict1A__GCA_036925125.1 Oreortyx pictus Mountain quail Ortyx picta 9029 Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Oreortyx HLorePict1A GCA_036925125.1 NCBI bOrePic1.0.hap1 Scaffold 2024-03-01 UCLA 10592639 58864636 NULL NULL NULL Excalfactoria_chinensis__Blue-breasted_quail__HLexcChin1B__GCF_039878825.1 Excalfactoria chinensis Blue-breasted quail Coturnix sinensis,Chinese painted quail,Coturnix chinensis 46218 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Excalfactoria HLexcChin1B GCF_039878825.1 NCBI bCotChi1.hap2 Chromosome 2024-05-31 Vertebrate Genomes Project 7816141 86361526 NULL NULL NULL Meleagris_gallopavo__turkey__HLmelGal6__GCA_905368555.1 Meleagris gallopavo turkey wild turkey,common turkey 9103 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris HLmelGal6 GCA_905368555.1 NCBI MGAL_WU_HG_1.0 Chromosome 2021-03-26 Plant Sciences 26554504 70339173 -1 -1 -1 Alectoris_rufa__red-legged_partridge__HLalcRuf1__GCA_019345075.1 Alectoris rufa red-legged partridge Tetrao rufus 9079 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Alectoris HLalcRuf1 GCA_019345075.1 NCBI ASM1934507v1 Scaffold 2021-07-26 CIBIO/InBIO- University of Porto 97167 11577318 -1 -1 -1 Alectoris_chukar__Chukar_partridge__HLaleChuk1__GCA_035666275.1 Alectoris chukar Chukar partridge Perdix chukar 9078 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Alectoris HLaleChuk1 GCA_035666275.1 NCBI chu_hap1.0 Chromosome 2024-01-17 Shanghai Jiao Tong University 1069603 93605039 NULL NULL NULL Alectoris_graeca__Rock_partridge__HLaleGrae1__GCA_965278835.1 Alectoris graeca Rock partridge Perdix graeca 40178 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Alectoris HLaleGrae1 GCA_965278835.1 NCBI bAleGra1.1 Chromosome 2025-05-31 NBIS (National Bioinformatics Infrastructure Sweden) 43679502 97991491 NULL NULL NULL Alectoris_magna__Przewalskis_partridge__HLaleMagn1__GCA_030625065.1 Alectoris magna Przewalskis partridge Caccabis magna 40179 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Alectoris HLaleMagn1 GCA_030625065.1 NCBI ASM3062506v1 Chromosome 2023-08-08 Yantai University 23345045 77158717 NULL NULL NULL Bambusicola_thoracicus__Chinese_bamboo-partridge__HLbamTho1__GCA_002909625.1 Bambusicola thoracicus Chinese bamboo-partridge Perdix thoracica,Bambusicola thoracica 9083 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Bambusicola HLbamTho1 GCA_002909625.1 NCBI Bthov1.0 Scaffold 2018-01-31 University of Florida 10597 13160 NULL NULL NULL Coturnix_coturnix__Common_quail__HLcotCotu1__GCA_051820755.1 Coturnix coturnix Common quail Tetrao coturnix 9091 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix HLcotCotu1 GCA_051820755.1 NCBI ASM5182075v1 Chromosome 2025-08-05 Donana Biological Station (EBD-CSIC) 2547645 75266076 NULL NULL NULL Coturnix_japonica__Japanese_quail__cotJap2__GCF_001577835.1 Coturnix japonica Japanese quail Coturnix coturnix japanica,Coturnix japonica japonica,Coturnix coturnix japonica,Coturnix coturnix Japonicus 93934 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix cotJap2 GCF_001577835.1 NCBI Coturnix japonica 2.0 Chromosome 2016-03-01 McDonnell Genome Institute - Washington University School of Medicine 511217 2975000 -1 -1 -1 Perdix_hodgsoniae__Tibetan_partridge__HLperHodg1__GCA_035772895.1 Perdix hodgsoniae Tibetan partridge Sacfa hodgsoniae 573593 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Perdix HLperHodg1 GCA_035772895.1 NCBI ASM3577289v1 Scaffold 2024-01-17 Kent State University 132711 9113078 NULL NULL NULL Chrysolophus_amherstiae__Lady_Amhersts_pheasant__HLchrAmhe1__GCA_036784685.1 Chrysolophus amherstiae Lady Amhersts pheasant Phasianus amherstiae 9088 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Chrysolophus HLchrAmhe1 GCA_036784685.1 NCBI C_AMH_1 Scaffold 2024-02-23 Ashoka University 3726849 3854451 NULL NULL NULL Chrysolophus_pictus__golden_pheasant__HLchrPic1__GCA_003413605.1 Chrysolophus pictus golden pheasant 9089 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Chrysolophus HLchrPic1 GCA_003413605.1 NCBI Chrysolophus_pictus_GenomeV1.0 Scaffold 2018-08-20 Inner Mongolia Agricultural University 38217 1560063 -1 -1 -1 Crossoptilon_crossoptilon__White-eared_pheasant__HLcroCros1__GCA_036346035.1 Crossoptilon crossoptilon White-eared pheasant Phasianus crossoptilon,Szechuan white-eared pheasant 30408 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Crossoptilon HLcroCros1 GCA_036346035.1 NCBI ASM3634603v1 Scaffold 2024-02-02 The University of North Carolina at Charlotte 29586366 29586366 NULL NULL NULL Crossoptilon_mantchuricum__brown_eared-pheasant__HLcroMan1__GCA_019593555.1 Crossoptilon mantchuricum brown eared-pheasant 9097 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Crossoptilon HLcroMan1 GCA_019593555.1 NCBI cma1 Scaffold 2021-08-13 Beijing Normal University 157489 3632751 -1 -1 -1 Gallus_gallus__chicken__HLgalGal7__GCF_016699485.2 Gallus gallus chicken Gallus gallus domesticus,red junglefowl,Phasianus gallus,bantam,dwarf Leghorn chickens,chickens 9031 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus HLgalGal7 GCF_016699485.2 NCBI bGalGal1.mat.broiler.GRCg7b Chromosome 2021-01-19 Vertebrate Genomes Project 18834961 90861225 -1 -1 -1 Gallus_gallus__Chicken__HLgalGal8__GCF_016700215.2 Gallus gallus Chicken dwarf Leghorn chickens,Phasianus gallus,red junglefowl,bantam,chickens,Gallus gallus domesticus 9031 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus HLgalGal8 GCF_016700215.2 NCBI bGalGal1.pat.whiteleghornlayer.GRCg7w_WZ Chromosome 2021-10-01 Vertebrate Genomes Project 17744542 90563926 NULL NULL NULL Gallus_gallus__chicken__galGal6__GCF_000002315.5 Gallus gallus chicken red junglefowl,bantam,chickens,dwarf Leghorn chickens,Gallus gallus domesticus 9031 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus galGal6 GCF_000002315.5 NCBI GRCg6a Chromosome 2018-03-27 Genome Reference Consortium 17655422 20785086 -1 -1 -1 Lophura_nycthemera__Silver_pheasant__HLlopNyc1__GCA_021292215.1 Lophura nycthemera Silver pheasant Phasianus nycthemerus,Gennaeus nycthemerus 9046 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Lophura HLlopNyc1 GCA_021292215.1 NCBI ASM2129221v1 Scaffold 2021-12-27 Shaanxi Normal University 6360312 6955689 -1 -1 -1 Lophura_swinhoii__Swinhoes_pheasant__HLlopSwin1__GCA_030408155.1 Lophura swinhoii Swinhoes pheasant Euplocamus swinhoii,Lophura swinhoei 140446 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Lophura HLlopSwin1 GCA_030408155.1 NCBI ASM3040815v1 Chromosome 2023-07-05 Shaanxi Normal University 11027439 61385513 NULL NULL NULL Pavo_cristatus__Indian_peafowl__HLpavCri1__GCA_005519975.1 Pavo cristatus Indian peafowl blue peafowl 9049 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Pavo HLpavCri1 GCA_005519975.1 NCBI AIIM_Pcri_1.0 Scaffold 2019-05-20 DEPARTMENT OF BIOCHEMISTRY, ALL INDIA INSTITUTE OF MEDICAL SCIENCES(AIIMS), NEW DELHI, INDIA 103131 190304 -1 -1 -1 Pavo_muticus__green_peafowl__HLpavMut1__GCA_016647715.1 Pavo muticus green peafowl 9050 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Pavo HLpavMut1 GCA_016647715.1 NCBI ASM1664771v1 Scaffold 2021-01-15 Kunming Institute of Zoology, Chinese Academy of Sciences 161314 2028964 -1 -1 -1 Phasianus_colchicus__Ring-necked_pheasant__HLphaCol1__GCA_004143745.1 Phasianus colchicus Ring-necked pheasant common pheasant 9054 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus HLphaCol1 GCA_004143745.1 NCBI ASM414374v1 Scaffold 2019-02-06 Shenzhen University 197843 10682894 -1 -1 -1 Phasianus_colchicus__Ring-necked_pheasant__HLphaCol2__GCA_015227605.1 Phasianus colchicus Ring-necked pheasant common pheasant 9054 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Phasianus HLphaCol2 GCA_015227605.1 NCBI ASM1522760v1 Scaffold 2020-11-04 Shanghai Jiao Tong University 1328716 59462841 -1 -1 -1 Syrmaticus_mikado__Mikado_pheasant__HLsyrMik1__GCA_003435085.1 Syrmaticus mikado Mikado pheasant 9065 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Syrmaticus HLsyrMik1 GCA_003435085.1 NCBI NTU_Smik_1.2 Scaffold 2018-08-31 National Taiwan University 107959 11324524 -1 -1 -1 Tragopan_temminckii__Temmincks_tragopan__HLtraTemm1__GCA_028571105.1 Tragopan temminckii Temmincks tragopan Satyra temminckii 9071 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Tragopan HLtraTemm1 GCA_028571105.1 NCBI ASM2857110v1 Scaffold 2023-02-09 Iridian Genomes 16512 45914079 NULL NULL NULL Centrocercus_minimus__Gunnison_sage-grouse__HLcenMin1__GCA_005890655.1 Centrocercus minimus Gunnison sage-grouse Centrocercus urophasianus minimus,Gunnison sage grouse 211967 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Centrocercus HLcenMin1 GCA_005890655.1 NCBI Cmin_1.0 Scaffold 2019-06-14 U.S. Geological Survey 3500535 3849570 -1 -1 -1 Centrocercus_urophasianus__Greater_sage-grouse__HLcenUro1__GCF_019232065.1 Centrocercus urophasianus Greater sage-grouse Tetrao urophasianus,greater sage grouse,Centrocerus urophasianus,sage grouse 9002 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Centrocercus HLcenUro1 GCF_019232065.1 NCBI USGS_Curo_1.0 Scaffold 2021-07-15 United States Geological Survey 177390 34618776 -1 -1 -1 Lagopus_leucura__white-tailed_ptarmigan__HLlagLeu1__GCF_019238085.1 Lagopus leucura white-tailed ptarmigan Lagopus leucurus 30410 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus HLlagLeu1 GCF_019238085.1 NCBI USGS_WTPT01 Scaffold 2021-07-15 United States Geological Survey 214153 36287040 -1 -1 -1 Lagopus_muta__rock_ptarmigan__HLlagMut1__GCA_023343835.1 Lagopus muta rock ptarmigan Tetrao mutus 64668 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus HLlagMut1 GCA_023343835.1 NCBI bLagMut1 primary Chromosome 2022-05-12 Vertebrate Genomes Project 17905263 71229700 -1 -1 -1 Lyrurus_tetrix__Black_grouse__HLlyrTetr1__GCA_043882375.1 Lyrurus tetrix Black grouse Tetrao tetrix 1233216 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lyrurus HLlyrTetr1 GCA_043882375.1 NCBI ASM4388237v1 Scaffold 2024-10-25 Bielefeld University 164437 69550540 NULL NULL NULL Tetrao_urogallus__Western_capercaillie__HLtetUro1__GCA_951394365.1 Tetrao urogallus Western capercaillie 100830 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tetrao HLtetUro1 GCA_951394365.1 NCBI bTetUro1.1 Chromosome 2023-06-15 WELLCOME SANGER INSTITUTE 1909808 71401156 -1 -1 -1 Tympanuchus_pallidicinctus__Lesser_prairie-chicken__HLtymPal1__GCF_026119805.1 Tympanuchus pallidicinctus Lesser prairie-chicken Cupidonia cupido pallidicincta 109042 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus HLtymPal1 GCF_026119805.1 NCBI pur_lepc_1.0 Scaffold 2022-11-10 Purdue University 19124196 45339891 -1 -1 -1 Tympanuchus_cupido_pinnatus__greater_prairie_chicken__HLtymCup1__GCA_001870855.1 Tympanuchus cupido pinnatus greater prairie chicken 211916 Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus; Tympanuchus cupido HLtymCup1 GCA_001870855.1 NCBI T_cupido_pinnatus_GPC_3440_v1 Scaffold 2016-11-07 Revive & Restore Heath Hen De-extinction Team 47484 12138678 -1 -1 -1 Ciconia_boyciana__Oriental_stork__HLcicBoyc1__GCF_034638445.1 Ciconia boyciana Oriental stork Ciconia ciconia boyciana 52775 Aves; Neognathae; Neoaves; Aequornithes; Ciconiiformes; Ciconiidae; Ciconia HLcicBoyc1 GCF_034638445.1 NCBI ASM3463844v1 Chromosome 2023-12-27 Northeast Forestry University 35788150 102765642 NULL NULL NULL Ciconia_ciconia__White_stork__HLcicCico1__GCA_030584885.1 Ciconia ciconia White stork Ardea ciconia 8928 Aves; Neognathae; Neoaves; Aequornithes; Ciconiiformes; Ciconiidae; Ciconia HLcicCico1 GCA_030584885.1 NCBI CIBIO_CCic_1.0 Scaffold 2023-07-31 CIBIO - Centro de Investigacao em Biodiversidade e Recursos Geneticos 180212 24544117 NULL NULL NULL Ciconia_maguari__Maguari_stork__HLcicMag2__GCA_017639555.1 Ciconia maguari Maguari stork Ardea maguari 52777 Aves; Neognathae; Neoaves; Aequornithes; Ciconiiformes; Ciconiidae; Ciconia HLcicMag2 GCA_017639555.1 NCBI bCicMag1.pri Chromosome 2021-03-30 Vertebrate Genomes Project 23757428 85554746 -1 -1 -1 Mycteria_americana__Wood_stork__HLmycAmer1__GCF_035582795.1 Mycteria americana Wood stork 33587 Aves; Neognathae; Neoaves; Aequornithes; Ciconiiformes; Ciconiidae; Mycteria HLmycAmer1 GCF_035582795.1 NCBI USCA_MyAme_1.0 Chromosome 2024-01-12 University of South Carolina Aiken 36845572 80020930 NULL NULL NULL Thinocorus_orbignyianus__Gray_breasted_seedsnipe__HLthiOrb1__GCA_013400375.1 Thinocorus orbignyianus Gray breasted seedsnipe Thinocorus orbignyanus 161742 Aves; Neognathae; Neoaves; Aequornithes; Ciconiiformes; Thinocoridae; Thinocorus HLthiOrb1 GCA_013400375.1 NCBI ASM1340037v1 Scaffold 2020-07-10 B10K Consortium 75634 845400 -1 -1 -1 Gavia_stellata__Red-throated_loon__HLgavStel3B__GCF_030936135.1 Gavia stellata Red-throated loon Colymbus stellatus 37040 Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia HLgavStel3B GCF_030936135.1 NCBI bGavSte3.hap2 Chromosome 2023-08-30 Vertebrate Genomes Project 13765203 50637386 NULL NULL NULL Gavia_stellata__red-throated_loon__gavSte1__GCF_000690875.1 Gavia stellata red-throated loon 37040 Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia gavSte1 GCF_000690875.1 NCBI ASM69087v1 Scaffold 2014-05-13 BGI 24321 45523 -1 -1 -1 Gavia_adamsii__Yellow-billed_loon__HLgavAdam2__GCA_982554905.1 Gavia adamsii Yellow-billed loon Colymbus adamsii 372293 Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia HLgavAdam2 GCA_982554905.1 NCBI B10K-D-NHMO-2 Scaffold 2026-05-04 Center for Evolutionary Hologenomics, University of Copenhagen 170112 17478523 NULL NULL NULL Ardea_cinerea__Grey_heron__HLardCine1__GCA_982553185.1 Ardea cinerea Grey heron Fischreiher 30390 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Ardea HLardCine1 GCA_982553185.1 NCBI B10K-D-NHMO-84 Scaffold 2026-05-03 Center for Evolutionary Hologenomics, University of Copenhagen 291988 9845750 NULL NULL NULL Ardea_cinerea__Grey_heron__HLardCine2A Ardea cinerea Grey heron Fischreiher 30390 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Ardea HLardCine2A https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ardea_cinerea/bArdCin1/assembly_curated/ https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ardea_cinerea/bArdCin1/assembly_curated/ 2026-08-21 70982289 84199254 NULL NULL NULL Botaurus_lentiginosus__American_bittern__HLbotLent1__GCA_982554215.1 Botaurus lentiginosus American bittern Ardea lentiginosa 110661 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Botaurus HLbotLent1 GCA_982554215.1 NCBI B10K-D-CUMV-8 Scaffold 2026-05-03 Center for Evolutionary Hologenomics, University of Copenhagen 160292 884859 NULL NULL NULL Butorides_virescens__green_heron__HLbutVir1__GCA_017310255.1 Butorides virescens green heron Ardea virescens 110671 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Butorides HLbutVir1 GCA_017310255.1 NCBI ASM1731025v1 Contig 2021-03-09 Canada's Genomic Enterprise 222988 222988 -1 -1 -1 Butorides_sundevalli__Lava_heron__HLbutSund1A__GCA_057816235.1 Butorides sundevalli Lava heron Ardea sundevalli 2767357 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Butorides HLbutSund1A GCA_057816235.1 NCBI bButSun1.hap1 Chromosome 2026-06-01 Vertebrate Genomes Project 47187809 84146035 NULL NULL NULL Cochlearius_cochlearius__boat-billed_heron__HLcocCoc1__GCA_013396365.1 Cochlearius cochlearius boat-billed heron Cochlearius cochlearia 110676 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Cochlearius HLcocCoc1 GCA_013396365.1 NCBI ASM1339636v1 Scaffold 2020-07-10 B10K Consortium 62809 1662124 -1 -1 -1 Egretta_garzetta__little_egret__egrGar1__GCF_000687185.1 Egretta garzetta little egret 188379 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta egrGar1 GCF_000687185.1 NCBI ASM68718v1 Scaffold 2014-05-09 College of Medicine and Forensics, Xi'an Jiaotong University 29019 3067157 -1 -1 -1 Gorsachius_goisagi__Japanese_night-heron__HLgorGoi1__GCA_018403395.1 Gorsachius goisagi Japanese night-heron 1215352 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Gorsachius HLgorGoi1 GCA_018403395.1 NCBI G_goisagi_scaffold_01 Scaffold 2021-03-31 Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies 42983 73010 -1 -1 -1 Gorsachius_magnificus__White-eared_night_heron__HLgorMagn1__GCA_034008185.1 Gorsachius magnificus White-eared night heron Oroanassa magnifica,Nycticorax magnificus 887050 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Gorsachius HLgorMagn1 GCA_034008185.1 NCBI SYSU_GOM Chromosome 2023-12-01 Sun Yat-sen University 18463888 84772300 NULL NULL NULL Nycticorax_nycticorax__black-crowned_night-heron__HLnycNyc1__GCA_023375905.1 Nycticorax nycticorax black-crowned night-heron Ardea nycticorax 8901 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Nycticorax HLnycNyc1 GCA_023375905.1 NCBI ASM2337590v1 Scaffold 2022-05-16 Xiamen University 73971 3016563 -1 -1 -1 Pelecanus_crispus__Dalmatian_pelican__HLpelCris2__GCA_030463565.1 Pelecanus crispus Dalmatian pelican Pelecanus philippensis crispus 36300 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus HLpelCris2 GCA_030463565.1 NCBI bPelCri1.pri Chromosome 2023-07-18 Vertebrate Genomes Project 9666746 86807213 NULL NULL NULL Pelecanus_erythrorhynchos__American_white_pelican__HLpelEryt1__GCA_051176275.1 Pelecanus erythrorhynchos American white pelican 1789,Pelecanus erythrorynchos,Pelecanus erythrorhynchos Gmelin 33618 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus HLpelEryt1 GCA_051176275.1 NCBI bPelEry1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 5571114 5571114 NULL NULL NULL Pelecanus_crispus__Dalmatian_pelican__pelCri1__GCF_000687375.1 Pelecanus crispus Dalmatian pelican Pelecanus philippensis crispus 36300 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Pelecanidae; Pelecanus pelCri1 GCF_000687375.1 NCBI ASM68737v1 Scaffold 2014-05-09 BGI 21679 43364 -1 -1 -1 Scopus_umbretta__Hamerkop__HLscoUmbr1__GCA_013400535.1 Scopus umbretta Hamerkop 33581 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Scopidae; Scopus HLscoUmbr1 GCA_013400535.1 NCBI ASM1340053v1 Scaffold 2020-07-10 B10K Consortium 16158 32357 NULL NULL NULL Eudocimus_ruber__Scarlet_ibis__HLeudRube1__GCA_041043685.1 Eudocimus ruber Scarlet ibis Scolopax rubra 335483 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Eudocimus HLeudRube1 GCA_041043685.1 NCBI ASM4104368v1 Scaffold 2024-08-05 Iridian Genomes 35096 101016769 NULL NULL NULL Mesembrinibis_cayennensis__Green_ibis__HLmesCay1__GCA_013399675.1 Mesembrinibis cayennensis Green ibis 1118748 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Mesembrinibis HLmesCay1 GCA_013399675.1 NCBI ASM1339967v1 Scaffold 2020-07-10 B10K Consortium 85098 482795 -1 -1 -1 Nipponia_nippon__crested_ibis__nipNip1__GCF_000708225.1 Nipponia nippon crested ibis Ibis nippon 128390 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia nipNip1 GCF_000708225.1 NCBI ASM70822v1 Scaffold 2014-06-16 College of Medicine and Forensics, Xi'an Jiaotong University 29116 5211696 -1 -1 -1 Platalea_leucorodia__Eurasian_spoonbill__HLplaLeuc1A__GCA_965183815.1 Platalea leucorodia Eurasian spoonbill 257867 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Platalea HLplaLeuc1A GCA_965183815.1 NCBI bPlaLeu2.hap1.1 Chromosome 2025-03-04 WELLCOME SANGER INSTITUTE 3299000 94714899 NULL NULL NULL Platalea_minor__Black-faced_spoonbill__HLplaMino1__GCA_037975005.1 Platalea minor Black-faced spoonbill 259913 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Platalea HLplaMino1 GCA_037975005.1 NCBI CUHK_Pmin_v1 Scaffold 2024-04-05 The Chinese University of Hong Kong 8684000 53081851 NULL NULL NULL Plegadis_falcinellus__glossy_ibis__HLpleFalc1__GCA_045787385.1 Plegadis falcinellus glossy ibis Tantalus falcinellus 52788 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Plegadis HLpleFalc1 GCA_045787385.1 NCBI ASM4578738v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 48305 50846 NULL NULL NULL Theristicus_caerulescens__plumbeous_ibis__HLtheCae1__GCA_020745775.1 Theristicus caerulescens plumbeous ibis Harpiprion caerulescens 1118847 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Theristicus HLtheCae1 GCA_020745775.1 NCBI bTheCae1.pri.cur Chromosome 2021-11-05 Vertebrate Genomes Project 37098842 101368359 -1 -1 -1 Threskiornis_aethiopicus__Sacred_ibis__HLthrAeth1__GCA_028583065.1 Threskiornis aethiopicus Sacred ibis Threskiornis aethiopica,Tantalus aethiopicus 100858 Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Threskiornis HLthrAeth1 GCA_028583065.1 NCBI ASM2858306v1 Scaffold 2023-02-10 Iridian Genomes 32973 90113662 NULL NULL NULL Phoebastria_albatrus__Short-tailed_albatross__HLphoAlb1__GCA_014363385.1 Phoebastria albatrus Short-tailed albatross Diomedea albatrus 54023 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Diomedeidae; Phoebastria HLphoAlb1 GCA_014363385.1 NCBI P_albatrus_scaffold_01 Scaffold 2020-08-22 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 43134 87989 -1 -1 -1 Phoebastria_immutabilis__Laysan_albatross__HLphoImmu1__GCA_035582775.1 Phoebastria immutabilis Laysan albatross Diomedea immutabilis 54020 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Diomedeidae; Phoebastria HLphoImmu1 GCA_035582775.1 NCBI Pimmutabilis_v1 Scaffold 2024-01-11 Hong Kong University 107301 1625257 NULL NULL NULL Fregetta_grallaria__White-bellied_storm-petrel__HLfreGral1__GCA_013399335.1 Fregetta grallaria White-bellied storm-petrel Procellaria grallaria 79628 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Hydrobatidae; Fregetta HLfreGral1 GCA_013399335.1 NCBI ASM1339933v1 Scaffold 2020-07-10 B10K Consortium 15821 342041 NULL NULL NULL Oceanites_oceanicus__Wilsons_storm-petrel__HLoceOce1__GCA_013396615.1 Oceanites oceanicus Wilsons storm-petrel Procellaria oceanica 79653 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Hydrobatidae; Oceanites HLoceOce1 GCA_013396615.1 NCBI ASM1339661v1 Scaffold 2020-07-10 B10K Consortium 28090 406319 -1 -1 -1 Hydrobates_tethys__Wedge-rumped_storm-petrel__HLhydTet1__GCA_013397025.1 Hydrobates tethys Wedge-rumped storm-petrel Oceanodroma tethys 79633 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Hydrobatidae; Oceanodroma HLhydTet1 GCA_013397025.1 NCBI ASM1339702v1 Scaffold 2020-07-10 B10K Consortium 54514 372486 -1 -1 -1 Ardenna_gravis__Great_shearwater__HLardGrav1__GCA_045784155.1 Ardenna gravis Great shearwater Procellaria gravis,Puffinus gravis 37051 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Ardenna HLardGrav1 GCA_045784155.1 NCBI ASM4578415v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 211952 11567451 NULL NULL NULL Calonectris_borealis__Corys_shearwater__HLcalBor1__GCA_013401115.1 Calonectris borealis Corys shearwater Calonectris kuhli borealis,Calonectris diomedea borealis,Puffinus borealis,Puffinus diomedea borealis,Calonectris borealis borealis 1323832 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Calonectris HLcalBor1 GCA_013401115.1 NCBI ASM1340111v1 Scaffold 2020-07-10 B10K Consortium 63034 65340 -1 -1 -1 Calonectris_borealis__Corys_shearwater__HLcalBor2 Calonectris borealis Corys shearwater Puffinus diomedea borealis,Calonectris diomedea borealis,Calonectris borealis borealis,Puffinus borealis,Calonectris kuhli borealis 1323832 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Calonectris HLcalBor2 NCBI NCBI 2024-08-19 4109000 86671854 -1 -1 -1 Calonectris_borealis__Corys_shearwater__HLcalBore3A__GCA_964195595.2 Calonectris borealis Corys shearwater Puffinus borealis,Puffinus diomedea borealis,Calonectris diomedea borealis,Calonectris borealis borealis,Calonectris kuhli borealis 1323832 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Calonectris HLcalBore3A GCA_964195595.2 NCBI bCalBor7.hap1.2 Chromosome 2024-07-24 WELLCOME SANGER INSTITUTE 4142416 86023716 NULL NULL NULL Fulmarus_glacialis__Northern_fulmar__fulGla1__GCF_000690835.1 Fulmarus glacialis Northern fulmar Fulmaris glacialis 30455 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Fulmarus fulGla1 GCF_000690835.1 NCBI ASM69083v1 Scaffold 2014-05-13 BGI 25926 47208 -1 -1 -1 Pelecanoides_urinatrix__Common_diving_petrel__HLpelUri1__GCA_013400755.1 Pelecanoides urinatrix Common diving petrel 37079 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Pelecanoides HLpelUri1 GCA_013400755.1 NCBI ASM1340075v1 Scaffold 2020-07-10 B10K Consortium 93910 250258 -1 -1 -1 Puffinus_mauretanicus__Balearic_shearwater__HLpufMau1__GCA_023333565.1 Puffinus mauretanicus Balearic shearwater 48681 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Puffinus HLpufMau1 GCA_023333565.1 NCBI ASM2333356v1 Scaffold 2022-05-11 Universitat de Barcelona 2082814 2125936 -1 -1 -1 Puffinus_yelkouan__Yelkouan_shearwater__HLpufYelk1__GCA_045787345.1 Puffinus yelkouan Yelkouan shearwater Procellaria yelkouan 48685 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Puffinus HLpufYelk1 GCA_045787345.1 NCBI ASM4578734v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 152848 5857322 NULL NULL NULL Puffinus_lherminieri__Audubons_shearwater__HLpufLher1__GCA_982556185.1 Puffinus lherminieri Audubons shearwater 47976 Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Puffinus HLpufLher1 GCA_982556185.1 NCBI B10K-DU-013-81 Scaffold 2026-05-03 Center for Evolutionary Hologenomics, University of Copenhagen 59671 1390083 NULL NULL NULL Aptenodytes_patagonicus__king_penguin__HLaptPat1__GCA_010087175.1 Aptenodytes patagonicus king penguin Aptenodytes patagonica 9234 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes HLaptPat1 GCA_010087175.1 NCBI BGI_Apat.V1 Scaffold 2020-01-31 BGI-Shenzhen 133461 2912628 -1 -1 -1 Aptenodytes_forsteri__emperor_penguin__aptFor1__GCF_000699145.1 Aptenodytes forsteri emperor penguin 9233 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes aptFor1 GCF_000699145.1 NCBI ASM69914v1 Scaffold 2014-06-06 BGI 31730 5071598 -1 -1 -1 Eudyptes_chrysocome__Rockhopper_penguin__HLeudChr1__GCA_010085355.1 Eudyptes chrysocome Rockhopper penguin Eudyptes crestatus,rock-hopper penguin 79626 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudChr1 GCA_010085355.1 NCBI BGI_Echrysoc.V1 Scaffold 2020-01-31 BGI-Shenzhen 80552 1949323 -1 -1 -1 Eudyptes_chrysolophus__Macaroni_penguin__HLeudChy1__GCA_010084205.1 Eudyptes chrysolophus Macaroni penguin Eudyptes chrysolophus chrysolophus 79627 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudChy1 GCA_010084205.1 NCBI BGI_Echrysol.V1 Scaffold 2020-01-31 BGI-Shenzhen 215030 13794837 -1 -1 -1 Eudyptes_filholi__Southern_rockhopper_penguin__HLeudFil1__GCA_010085365.1 Eudyptes filholi Southern rockhopper penguin Eudyptes cristatus filholi,Eudyptes crestatus filholi,Eudyptes chrysocome filholi 1419345 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudFil1 GCA_010085365.1 NCBI BGI_Echrysoc_fil.V1 Scaffold 2020-01-31 BGI-Shenzhen 86112 6429221 -1 -1 -1 Eudyptes_moseleyi__Northern_rockhopper_penguin__HLeudMos1__GCA_010082375.1 Eudyptes moseleyi Northern rockhopper penguin 2495534 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudMos1 GCA_010082375.1 NCBI BGI_Emos.V1 Scaffold 2020-01-31 BGI-Shenzhen 42318 2252023 -1 -1 -1 Eudyptes_pachyrhynchus__Fiordland_penguin__HLeudPac1__GCA_010085335.1 Eudyptes pachyrhynchus Fiordland penguin 37080 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudPac1 GCA_010085335.1 NCBI BGI_Epac.V1 Scaffold 2020-01-31 BGI-Shenzhen 58247 8912950 -1 -1 -1 Eudyptes_robustus__Snares_penguin__HLeudRob1__GCA_010085315.1 Eudyptes robustus Snares penguin 345251 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudRob1 GCA_010085315.1 NCBI BGI_Erob.V1 Scaffold 2020-01-31 BGI-Shenzhen 83286 367542 -1 -1 -1 Eudyptes_schlegeli__Royal_penguin__HLeudSch1__GCA_010080425.1 Eudyptes schlegeli Royal penguin Eudyptes chrysolophus schlegeli 57240 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudSch1 GCA_010080425.1 NCBI BGI_Esch.V1 Scaffold 2020-01-31 BGI-Shenzhen 42596 1894246 -1 -1 -1 Eudyptes_sclateri__Erect-crested_penguin__HLeudScl1__GCA_010078445.1 Eudyptes sclateri Erect-crested penguin 92688 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptes HLeudScl1 GCA_010078445.1 NCBI BGI_Escl.V1 Scaffold 2020-01-31 BGI-Shenzhen 83178 1921244 -1 -1 -1 Eudyptula_albosignata__White-flippered_penguin__HLeudAlb1__GCA_010080465.1 Eudyptula albosignata White-flippered penguin Eudyptula minor albosignata 345258 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptula HLeudAlb1 GCA_010080465.1 NCBI BGI_Emin_alb.V1 Scaffold 2020-01-31 BGI-Shenzhen 104210 21866543 -1 -1 -1 Eudyptula_minor__Little_blue_penguin__HLeudMin1__GCA_010080355.1 Eudyptula minor Little blue penguin 37083 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptula HLeudMin1 GCA_010080355.1 NCBI BGI_Emin.V1 Scaffold 2020-01-31 BGI-Shenzhen 95403 21127646 -1 -1 -1 Eudyptula_novaehollandiae__Australian_little_penguin__HLeudNov1__GCA_010078495.1 Eudyptula novaehollandiae Australian little penguin Spheniscus novaehollandiae,Eudyptula minor novaehollandiae 2052820 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Eudyptula; Eudyptula minor HLeudNov1 GCA_010078495.1 NCBI BGI_Enov.V1 Scaffold 2020-01-31 BGI-Shenzhen 134160 29280209 -1 -1 -1 Megadyptes_antipodes_antipodes__Yellow-eyed_penguin__HLmegAnt1__GCA_010078485.1 Megadyptes antipodes antipodes Yellow-eyed penguin 2517240 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Megadyptes; Megadyptes antipodes HLmegAnt1 GCA_010078485.1 NCBI BGI_Mant.V1 Scaffold 2020-01-31 BGI-Shenzhen 89505 23315117 -1 -1 -1 Pygoscelis_antarcticus__chinstrap_penguin__HLpygAnt1__GCA_010078415.1 Pygoscelis antarcticus chinstrap penguin Pygoscelis antarctica 79643 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis HLpygAnt1 GCA_010078415.1 NCBI BGI_Pant.V1 Scaffold 2020-01-31 BGI-Shenzhen 136952 6271244 -1 -1 -1 Pygoscelis_papua__Gentoo_penguin__HLpygPap1__GCA_010090195.1 Pygoscelis papua Gentoo penguin 30457 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis HLpygPap1 GCA_010090195.1 NCBI BGI_Ppap.V1 Scaffold 2020-01-31 BGI-Shenzhen 101329 2789995 -1 -1 -1 Pygoscelis_adeliae__Adelie_penguin__pygAde1__GCF_000699105.1 Pygoscelis adeliae Adelie penguin Pygoscelis adelia 9238 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis pygAde1 GCF_000699105.1 NCBI ASM69910v1 Scaffold 2014-06-06 BGI 22195 5118896 -1 -1 -1 Spheniscus_demersus__jackass_penguin__HLsphDem1__GCA_010077935.1 Spheniscus demersus jackass penguin 92683 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphDem1 GCA_010077935.1 NCBI BGI_Sdem.V1 Scaffold 2020-01-31 BGI-Shenzhen 109372 15386364 -1 -1 -1 Spheniscus_demersus__Jackass_penguin__HLsphDeme2A__GCA_050947425.1 Spheniscus demersus Jackass penguin Diomedea demersa 92683 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphDeme2A GCA_050947425.1 NCBI bSphDem1.hap1 Chromosome 2025-06-17 Vertebrate Genomes Project 18147389 88319617 NULL NULL NULL Spheniscus_humboldti__Humboldts_penguin__HLsphHum1__GCA_010076325.1 Spheniscus humboldti Humboldts penguin 9240 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphHum1 GCA_010076325.1 NCBI BGI_Shum.V1 Scaffold 2020-01-31 BGI-Shenzhen 35021 6229819 -1 -1 -1 Spheniscus_humboldti__Humboldts_penguin__HLsphHumb2__GCA_027474245.1 Spheniscus humboldti Humboldts penguin 9240 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphHumb2 GCA_027474245.1 NCBI bSphHub1.pri Chromosome 2022-12-28 Vertebrate Genomes Project 13936613 89079306 NULL NULL NULL Spheniscus_magellanicus__Magellanic_penguin__HLsphMag1__GCA_010076225.1 Spheniscus magellanicus Magellanic penguin 37081 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphMag1 GCA_010076225.1 NCBI BGI_Smag.V1 Scaffold 2020-01-31 BGI-Shenzhen 101702 12679469 -1 -1 -1 Spheniscus_mendiculus__Galapagos_penguin__HLsphMen1__GCA_010077915.1 Spheniscus mendiculus Galapagos penguin 156760 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphMen1 GCA_010077915.1 NCBI BGI_Smen.V1 Scaffold 2020-01-31 BGI-Shenzhen 81907 381910 -1 -1 -1 Spheniscus_mendiculus__Galapagos_penguin__HLsphMen2__GCA_003264655.1 Spheniscus mendiculus Galapagos penguin 156760 Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Spheniscus HLsphMen2 GCA_003264655.1 NCBI ASM326465v1 Scaffold 2018-06-25 Center for Bioinformatics and Integrative Biology 22339 5226231 -1 -1 -1 Anhinga_anhinga__American_anhinga__HLanhAnh1__GCA_013396435.1 Anhinga anhinga American anhinga 56067 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Anhingidae; Anhinga HLanhAnh1 GCA_013396435.1 NCBI ASM1339643v1 Scaffold 2020-07-10 B10K Consortium 25978 337495 -1 -1 -1 Fregata_magnificens__Magnificent_frigatebird__HLfreMag1__GCA_013389945.1 Fregata magnificens Magnificent frigatebird 37042 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Fregatidae; Fregata HLfreMag1 GCA_013389945.1 NCBI ASM1338994v1 Scaffold 2020-07-06 B10K Consortium 35511 145412 -1 -1 -1 Fregata_minor__Great_frigatebird__HLfreMino1__GCA_057588175.1 Fregata minor Great frigatebird Pelecanus minor 57241 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Fregatidae; Fregata HLfreMino1 GCA_057588175.1 NCBI ASM5758817v1 Scaffold 2026-05-16 Iridian Genomes 42172 83907473 NULL NULL NULL Nannopterum_auritus__double-crested_cormorant__HLnanAur1__GCA_002173455.1 Nannopterum auritus double-crested cormorant Phalacrocorax auritus 56069 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax HLnanAur1 GCA_002173455.1 NCBI ASM217345v1 Scaffold 2017-06-06 UCLA 97559 1990987 -1 -1 -1 Nannopterum_harrisi__Galapagos_flightless_cormorant__HLnanHar1__GCA_002173475.1 Nannopterum harrisi Galapagos flightless cormorant Phalacrocorax harrisi,Compsohaelius harrisi,Nannopteron harrisi 473964 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax HLnanHar1 GCA_002173475.1 NCBI Pharrisi_ref_V1 Scaffold 2017-06-06 UCLA 100243 4648443 -1 -1 -1 Phalacrocorax_aristotelis__European_shag__HLphaAri1__GCA_949628215.1 Phalacrocorax aristotelis European shag Leucocarbo aristotelis,Gulosus aristotelis,Pelecanus aristotelis 126867 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax HLphaAri1 GCA_949628215.1 NCBI bGulAri2.1 Chromosome 2023-04-08 WELLCOME SANGER INSTITUTE 11420000 78889319 -1 -1 -1 Phalacrocorax_carbo__Great_cormorant__HLphaCarb2__GCF_963921805.1 Phalacrocorax carbo Great cormorant cormorant,common cormorant,Pelecanus carbo 9209 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax HLphaCarb2 GCF_963921805.1 NCBI bPhaCar2.1 Chromosome 2024-02-09 WELLCOME SANGER INSTITUTE 4631399 84621172 NULL NULL NULL Phalacrocorax_pelagicus__Pelagic_cormorant__HLuriPel1__GCA_002173435.1 Phalacrocorax pelagicus Pelagic cormorant Urile pelagicus,Leucocarbo pelagicus 2723871 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax HLuriPel1 GCA_002173435.1 NCBI ASM217343v1 Scaffold 2017-06-06 UCLA 67731 1719903 -1 -1 -1 Phalacrocorax_carbo__great_cormorant__phaCar1__GCF_000708925.1 Phalacrocorax carbo great cormorant cormorant,common cormorant 9209 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax phaCar1 GCF_000708925.1 NCBI ASM70892v1 Scaffold 2014-06-17 BGI 17343 48427 -1 -1 -1 Morus_bassanus__Northern_gannet__HLmorBass1B__GCA_031468815.1 Morus bassanus Northern gannet Pelecanus bassanus,Sula bassana 37578 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Sulidae; Morus HLmorBass1B GCA_031468815.1 NCBI bMorBas2.hap2 Chromosome 2023-09-15 Vertebrate Genomes Project 10178591 85624757 NULL NULL NULL Sula_dactylatra__masked_booby__HLsulDac1__GCA_013389905.1 Sula dactylatra masked booby,white booby 56068 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Sulidae; Sula HLsulDac1 GCA_013389905.1 NCBI ASM1338990v1 Scaffold 2020-07-06 B10K Consortium 38906 156242 -1 -1 -1 Sula_leucogaster__Brown_booby__HLsulLeuc1__GCA_045787245.1 Sula leucogaster Brown booby Pelecanus leucogaster 57661 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Sulidae; Sula HLsulLeuc1 GCA_045787245.1 NCBI ASM4578724v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 159547 11631035 NULL NULL NULL Sula_nebouxii__Blue-footed_booby__HLsulNebo1__GCA_047404275.1 Sula nebouxii Blue-footed booby 37087 Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Sulidae; Sula HLsulNebo1 GCA_047404275.1 NCBI ASM4740427v1 Scaffold 2025-02-04 Iridian Genomes 1215 1607336 NULL NULL NULL Alca_torda__razorbill__HLalcTor1__GCA_008658365.1 Alca torda razorbill Tordalk 28689 Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Alca HLalcTor1 GCA_008658365.1 NCBI bAlcTor1 primary Chromosome 2019-10-10 G10K 18221265 84526827 -1 -1 -1 Cepphus_grylle__Black_guillemot__HLcepGry1__GCA_013401065.1 Cepphus grylle Black guillemot 28697 Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Cepphus HLcepGry1 GCA_013401065.1 NCBI ASM1340106v1 Scaffold 2020-07-10 B10K Consortium 39689 16187446 -1 -1 -1 Fratercula_arctica__Atlantic_puffin__HLfraArc1__GCA_905066775.2 Fratercula arctica Atlantic puffin Alca arctica 28701 Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Fratercula HLfraArc1 GCA_905066775.2 NCBI FratArc_v2 Scaffold 2021-07-28 University of Oslo 98300 105661561 -1 -1 -1 Fratercula_cirrhata__tufted_puffin__HLfraCirr1__GCA_014363165.1 Fratercula cirrhata tufted puffin Lunda cirrhata,Alca cirrhata 43311 Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Fratercula HLfraCirr1 GCA_014363165.1 NCBI F_cirrhata_scaffold_01 Scaffold 2020-08-22 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 19680 54950 NULL NULL NULL Uria_aalge__common_murre__HLuriAal1__GCA_013401055.1 Uria aalge common murre Atlantic murre,Guillemot 13746 Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Uria HLuriAal1 GCA_013401055.1 NCBI ASM1340105v1 Scaffold 2020-07-10 B10K Consortium 23216 11658233 -1 -1 -1 Uria_lomvia__thick-billed_guillemot__HLuriLom1__GCA_002289315.1 Uria lomvia thick-billed guillemot 28711 Aves; Neognathae; Neoaves; Charadriiformes; Alcidae; Uria HLuriLom1 GCA_002289315.1 NCBI UriLom_1.1 Scaffold 2017-09-11 Cornell University 24899 15847591 -1 -1 -1 Burhinus_bistriatus__Double_striped_thick_knee__HLburBis1__GCA_013397275.1 Burhinus bistriatus Double striped thick knee 240201 Aves; Neognathae; Neoaves; Charadriiformes; Burhinidae; Burhinus HLburBis1 GCA_013397275.1 NCBI ASM1339727v1 Scaffold 2020-07-10 B10K Consortium 46939 409133 -1 -1 -1 Burhinus_oedicnemus__Eurasian_thick-knee__HLburOed1__GCA_008921705.1 Burhinus oedicnemus Eurasian thick-knee 85105 Aves; Neognathae; Neoaves; Charadriiformes; Burhinidae; Burhinus HLburOed1 GCA_008921705.1 NCBI REN_Boedic_1.0 Scaffold 2019-10-08 International Fund for Houbara Conservation 93678 1937420 -1 -1 -1 Anarhynchus_nivosus__Snowy_plover__HLanaNivo1__GCA_043789995.1 Anarhynchus nivosus Snowy plover Aegialitis nivosa,Charadrius nivosus 985688 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Anarhynchus HLanaNivo1 GCA_043789995.1 NCBI bChaNiv1.0.p Scaffold 2024-10-24 University of California, Santa Cruz 26317920 85629357 NULL NULL NULL Charadrius_alexandrinus__Kentish_plover__HLchaAle1__GCA_008711295.1 Charadrius alexandrinus Kentish plover 50392 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Anarhynchus HLchaAle1 GCA_008711295.1 NCBI ASM871129v1 Scaffold 2019-09-27 Sun Yat-sen University 129786 3290793 -1 -1 -1 Charadrius_vociferus__killdeer__chaVoc2__GCF_000708025.1 Charadrius vociferus killdeer Oxyechus vociferus,Charadrius vociferous,Aegialitis vocifera 50402 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius chaVoc2 GCF_000708025.1 NCBI ASM70802v2 Scaffold 2014-08-05 BGI 39278 3657050 -1 -1 -1 Ibidorhyncha_struthersii__Ibisbill__HLibiStr1__GCA_013398815.1 Ibidorhyncha struthersii Ibisbill 425643 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Ibidorhyncha HLibiStr1 GCA_013398815.1 NCBI ASM1339881v1 Scaffold 2020-07-10 B10K Consortium 64861 514623 -1 -1 -1 Pluvialis_apricaria__European_golden_plover__HLpluApr1__GCA_017639485.1 Pluvialis apricaria European golden plover 670352 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Pluvialis HLpluApr1 GCA_017639485.1 NCBI bPluApr1.pri Chromosome 2021-03-30 Vertebrate Genomes Project 15203797 87527607 -1 -1 -1 Pluvialis_dominica__American_golden-plover__HLpluDomi1__GCA_045787105.1 Pluvialis dominica American golden-plover Charadrius dominicius 240205 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Pluvialis HLpluDomi1 GCA_045787105.1 NCBI ASM4578710v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 192384 4827776 NULL NULL NULL Pluvianellus_socialis__magellanic_plover__HLpluSoc1__GCA_013400795.1 Pluvianellus socialis magellanic plover 227228 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Pluvianellus HLpluSoc1 GCA_013400795.1 NCBI ASM1340079v1 Scaffold 2020-07-10 B10K Consortium 48629 121952 -1 -1 -1 Vanellus_vanellus__Northern_lapwing__HLvanVane1A__GCA_965231255.1 Vanellus vanellus Northern lapwing Tringa vanellus 100859 Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Vanellus HLvanVane1A GCA_965231255.1 NCBI bVanVan1.hap1.1 Chromosome 2025-03-28 WELLCOME SANGER INSTITUTE 1930563 82789932 NULL NULL NULL Chionis_minor__black-faced_sheathbill__HLchiMin1__GCA_013398295.1 Chionis minor black-faced sheathbill 227182 Aves; Neognathae; Neoaves; Charadriiformes; Chionididae; Chionis HLchiMin1 GCA_013398295.1 NCBI ASM1339829v1 Scaffold 2020-07-10 B10K Consortium 128427 592381 -1 -1 -1 Dromas_ardeola__Crab_plover__HLdroArd1__GCA_013398915.1 Dromas ardeola Crab plover 458190 Aves; Neognathae; Neoaves; Charadriiformes; Dromadidae; Dromas HLdroArd1 GCA_013398915.1 NCBI ASM1339891v1 Scaffold 2020-07-10 B10K Consortium 40991 314166 -1 -1 -1 Glareola_pratincola__Collared_pratincole__HLglaPra1__GCA_013401295.1 Glareola pratincola Collared pratincole 43316 Aves; Neognathae; Neoaves; Charadriiformes; Glareolidae; Glareola HLglaPra1 GCA_013401295.1 NCBI ASM1340129v1 Scaffold 2020-07-10 B10K Consortium 39898 411631 -1 -1 -1 Rhinoptilus_africanus__double-banded_courser__HLrhiAfr1__GCA_013400135.1 Rhinoptilus africanus double-banded courser 240209 Aves; Neognathae; Neoaves; Charadriiformes; Glareolidae; Rhinoptilus HLrhiAfr1 GCA_013400135.1 NCBI ASM1340013v1 Scaffold 2020-07-10 B10K Consortium 52916 382637 -1 -1 -1 Haematopus_ostralegus__Eurasian_oystercatcher__HLhaeOstr1A__GCA_976988815.1 Haematopus ostralegus Eurasian oystercatcher 31908 Aves; Neognathae; Neoaves; Charadriiformes; Haematopodidae; Haematopus HLhaeOstr1A GCA_976988815.1 NCBI bHaeOst1.hap1.1 Chromosome 2025-11-08 WELLCOME SANGER INSTITUTE 4836579 87398943 NULL NULL NULL Jacana_jacana__wattled_jacana__HLjacJac1__GCA_013400555.1 Jacana jacana wattled jacana Parra jacana 54508 Aves; Neognathae; Neoaves; Charadriiformes; Jacanidae; Jacana HLjacJac1 GCA_013400555.1 NCBI ASM1340055v1 Scaffold 2020-07-10 B10K Consortium 31221 126631 -1 -1 -1 Chlidonias_hybrida__Whiskered_tern__HLchlHybr1__GCA_045838335.1 Chlidonias hybrida Whiskered tern Sterna hybrida,Chlidonias hybridus 297805 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Chlidonias HLchlHybr1 GCA_045838335.1 NCBI ASM4583833v1 Scaffold 2024-12-09 Bird 10,000 Genomes (B10K) consortium 139226 12576810 NULL NULL NULL Chroicocephalus_genei__Slender-billed_gull__HLchrGene1__GCA_045788085.1 Chroicocephalus genei Slender-billed gull Larus genei 1569666 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Chroicocephalus HLchrGene1 GCA_045788085.1 NCBI ASM4578808v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 229057 28322704 NULL NULL NULL Chroicocephalus_maculipennis__brown-hooded_gull__HLchrMac1__GCA_013397655.1 Chroicocephalus maculipennis brown-hooded gull Larus maculipennis 287016 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Chroicocephalus HLchrMac1 GCA_013397655.1 NCBI ASM1339765v1 Scaffold 2020-07-10 B10K Consortium 39391 476221 -1 -1 -1 Chroicocephalus_ridibundus__Black-headed_gull__HLchrRid1__GCA_030820635.1 Chroicocephalus ridibundus Black-headed gull Larus ridibundus,Lachmoewe 1192867 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Chroicocephalus HLchrRid1 GCA_030820635.1 NCBI KIZ_Lrid_1.0 Chromosome 2023-08-18 Kunming Institute of Zoology 18400000 83560245 -1 -1 -1 Chroicocephalus_ridibundus__Black-headed_gull__HLchrRidi2__GCF_963924245.1 Chroicocephalus ridibundus Black-headed gull Larus ridibundus,Lachmoewe 1192867 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Chroicocephalus HLchrRidi2 GCF_963924245.1 NCBI bChrRid1.1 Chromosome 2024-01-20 WELLCOME SANGER INSTITUTE 4003687 83755488 NULL NULL NULL Gelochelidon_nilotica__Gull-billed_tern__HLgelNilo1__GCA_045787485.1 Gelochelidon nilotica Gull-billed tern Sterna nilotica 126865 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Gelochelidon HLgelNilo1 GCA_045787485.1 NCBI ASM4578748v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 233686 16281963 NULL NULL NULL Ichthyaetus_audouinii__Audouins_gull__HLichAudo1__GCA_045787045.1 Ichthyaetus audouinii Audouins gull Larus audouinii 1288292 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Ichthyaetus HLichAudo1 GCA_045787045.1 NCBI ASM4578704v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 203005 23132222 NULL NULL NULL Ichthyaetus_ichthyaetus__Great_black-headed_gull__HLichIcht1__GCA_982556625.1 Ichthyaetus ichthyaetus Great black-headed gull Larus ichthyaetus 126702 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Ichthyaetus HLichIcht1 GCA_982556625.1 NCBI B10K-USNM-639719 Scaffold 2026-05-02 Center for Evolutionary Hologenomics, University of Copenhagen 151757 1946236 NULL NULL NULL Larus_argentatus__European_herring_gull__HLlarArg1A__GCA_964417175.1 Larus argentatus European herring gull 35669 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarArg1A GCA_964417175.1 NCBI bLarArg3.hap1.1 Chromosome 2024-12-05 WELLCOME SANGER INSTITUTE 3525167 88668981 -1 -1 -1 Larus_cachinnans__Caspian_gull__HLlarCach1__GCA_045783775.1 Larus cachinnans Caspian gull Larus cachinnans cachinnans,Larus argentatus cachinnans,eastern Caspian gull 119609 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarCach1 GCA_045783775.1 NCBI ASM4578377v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 208743 17826151 NULL NULL NULL Larus_canus__Mew_gull__HLlarCanu1A__GCA_966204495.1 Larus canus Mew gull 28681 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarCanu1A GCA_966204495.1 NCBI bLarCan2.hap1.1 Chromosome 2025-08-24 WELLCOME SANGER INSTITUTE 3838233 88504857 NULL NULL NULL Larus_fuscus__Lesser_black-backed_gull__HLlarFus1__GCA_963932225.1 Larus fuscus Lesser black-backed gull 8915 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarFus1 GCA_963932225.1 NCBI bLarFus1.1 Chromosome 2024-02-07 WELLCOME SANGER INSTITUTE 3570916 86500895 -1 -1 -1 Larus_glaucescens__Glaucous-winged_gull__HLlarGlau1A__GCA_965654385.1 Larus glaucescens Glaucous-winged gull 119606 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarGlau1A GCA_965654385.1 NCBI bLarGla1.hap1.1 Chromosome 2025-08-03 WELLCOME SANGER INSTITUTE 3410995 85721269 NULL NULL NULL Larus_hyperboreus__Glaucous_gull__HLlarHype1A__GCA_965654215.1 Larus hyperboreus Glaucous gull 119637 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarHype1A GCA_965654215.1 NCBI bLarHyp1.hap1.1 Chromosome 2025-08-03 WELLCOME SANGER INSTITUTE 2840269 85666633 NULL NULL NULL Larus_marinus__Great_black-backed_gull__HLlarMari1A__GCA_965649785.1 Larus marinus Great black-backed gull 8912 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarMari1A GCA_965649785.1 NCBI bLarMar3.hap1.1 Chromosome 2025-07-31 WELLCOME SANGER INSTITUTE 4327725 88539195 NULL NULL NULL Larus_michahellis__Yellow-legged_gull__HLlarMich1__GCF_964199755.1 Larus michahellis Yellow-legged gull Larus argentatus michahellis 119627 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarMich1 GCF_964199755.1 NCBI bLarMic1.1 Chromosome 2024-07-14 WELLCOME SANGER INSTITUTE 4216312 87713602 NULL NULL NULL Larus_occidentalis__Western_gull__HLlarOcci1A__GCA_965654455.1 Larus occidentalis Western gull 126713 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarOcci1A GCA_965654455.1 NCBI bLarOcc1.hap1.1 Chromosome 2025-08-03 WELLCOME SANGER INSTITUTE 3779439 85627649 NULL NULL NULL Larus_smithsonianus__American_herring_gull__HLlarSmi1__GCA_013400295.1 Larus smithsonianus American herring gull Larus argentatus smithsonianus 243888 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarSmi1 GCA_013400295.1 NCBI ASM1340029v1 Scaffold 2020-07-10 B10K Consortium 59826 82245 -1 -1 -1 Larus_thayeri__Thayers_gull__HLlarThay1__GCA_045787305.1 Larus thayeri Thayers gull Larus glaucoides thayeri 126718 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Larus HLlarThay1 GCA_045787305.1 NCBI ASM4578730v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 131818 8468150 NULL NULL NULL Leucophaeus_fuliginosus__Lava_gull__HLleuFuli1__GCA_053573735.1 Leucophaeus fuliginosus Lava gull Larus fulginosus,Larus fuliginosus 328047 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Leucophaeus HLleuFuli1 GCA_053573735.1 NCBI bLeucoFulig_1.0 Chromosome 2025-11-21 California Academy of Sciences 42764735 85146451 NULL NULL NULL Pagophila_eburnea__Ivory_gull__HLpagEbur1__GCA_045787705.1 Pagophila eburnea Ivory gull Larus eburneus 126721 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Pagophila HLpagEbur1 GCA_045787705.1 NCBI ASM4578770v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 228416 28389110 NULL NULL NULL Rissa_tridactyla__black-legged_kittiwake__HLrisTri2__GCF_028500815.1 Rissa tridactyla black-legged kittiwake Larus tridactylus 75485 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rissa HLrisTri2 GCF_028500815.1 NCBI bRisTri1.patW.cur.20221130 Chromosome 2023-02-09 Vertebrate Genomes Project 15653959 88208671 -1 -1 -1 Rynchops_niger__black_skimmer__HLrynNig1__GCA_013400035.1 Rynchops niger black skimmer 227184 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Rynchops HLrynNig1 GCA_013400035.1 NCBI ASM1340003v1 Scaffold 2020-07-10 B10K Consortium 57549 523074 -1 -1 -1 Sterna_hirundo__Common_tern__HLsteHir1__GCA_009819605.1 Sterna hirundo Common tern Flussseeschwalbe 108405 Aves; Neognathae; Neoaves; Charadriiformes; Laridae; Sterna HLsteHir1 GCA_009819605.1 NCBI bSteHir1.pri Chromosome 2019-12-31 Vertebrate Genomes Project 22002498 85487239 -1 -1 -1 Pedionomus_torquatus__plains-wanderer__HLpedTor1__GCA_013398155.1 Pedionomus torquatus plains-wanderer 227192 Aves; Neognathae; Neoaves; Charadriiformes; Pedionomidae; Pedionomus HLpedTor1 GCA_013398155.1 NCBI ASM1339815v1 Scaffold 2020-07-10 B10K Consortium 36855 254645 -1 -1 -1 Himantopus_himantopus_leucocephalus__black-winged_stilt__HLhimHim1__GCA_003993805.1 Himantopus himantopus leucocephalus black-winged stilt Himantopus leucocephalus 507594 Aves; Neognathae; Neoaves; Charadriiformes; Recurvirostridae; Himantopus HLhimHim1 GCA_003993805.1 NCBI UO_Hhiman_2.0 Scaffold 2019-01-04 University of Otago 36551 99457149 -1 -1 -1 Himantopus_himantopus__black-winged_stilt__HLhimHim2__GCA_013400095.1 Himantopus himantopus black-winged stilt 225398 Aves; Neognathae; Neoaves; Charadriiformes; Recurvirostridae; Himantopus HLhimHim2 GCA_013400095.1 NCBI ASM1340009v1 Scaffold 2020-07-10 B10K Consortium 79248 712820 -1 -1 -1 Recurvirostra_avosetta__Pied_Avocet__HLrecAvo1__GCA_004023745.1 Recurvirostra avosetta Pied Avocet 171275 Aves; Neognathae; Neoaves; Charadriiformes; Recurvirostridae; Recurvirostra HLrecAvo1 GCA_004023745.1 NCBI ASM402374v1 Scaffold 2019-01-15 ConSERT 10462 96778 NULL NULL NULL Nycticryphes_semicollaris__South_American_painted-snipe__HLnycSem1__GCA_013400055.1 Nycticryphes semicollaris South American painted-snipe Rostratula semicollaris 227226 Aves; Neognathae; Neoaves; Charadriiformes; Rostratulidae; Nycticryphes HLnycSem1 GCA_013400055.1 NCBI ASM1340005v1 Scaffold 2020-07-10 B10K Consortium 74117 702727 -1 -1 -1 Rostratula_benghalensis__greater_painted-snipe__HLrosBen1__GCA_013399305.1 Rostratula benghalensis greater painted-snipe 118793 Aves; Neognathae; Neoaves; Charadriiformes; Rostratulidae; Rostratula HLrosBen1 GCA_013399305.1 NCBI ASM1339930v1 Scaffold 2020-07-10 B10K Consortium 78725 3398382 -1 -1 -1 Actitis_hypoleucos__Common_sandpiper__HLactHypo1__GCA_045788345.1 Actitis hypoleucos Common sandpiper Tringa hypoleucos 320702 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Actitis HLactHypo1 GCA_045788345.1 NCBI ASM4578834v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 214846 20815268 NULL NULL NULL Arenaria_interpres__ruddy_turnstone__HLareInt1__GCA_013399435.1 Arenaria interpres ruddy turnstone turnstone,Tringa interpres 54971 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Arenaria HLareInt1 GCA_013399435.1 NCBI ASM1339943v1 Scaffold 2020-07-10 B10K Consortium 48252 181329 -1 -1 -1 Calidris_canutus__Red_knot__HLcalCanu1__GCA_045788245.1 Calidris canutus Red knot Tringa canutus 227173 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalCanu1 GCA_045788245.1 NCBI ASM4578824v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 243797 22117256 NULL NULL NULL Calidris_fuscicollis__White-rumped_sandpiper__HLcalFusc1__GCA_045787265.1 Calidris fuscicollis White-rumped sandpiper Tringa fuscicollis 279940 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalFusc1 GCA_045787265.1 NCBI ASM4578726v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 180095 9472662 NULL NULL NULL Calidris_himantopus__Stilt_sandpiper__HLcalHima1__GCA_045788275.1 Calidris himantopus Stilt sandpiper Micropalama himantopus,Tringa himantopus 279938 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalHima1 GCA_045788275.1 NCBI ASM4578827v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 213545 11822840 NULL NULL NULL Calidris_maritima__Purple_sandpiper__HLcalMari1__GCA_045783535.1 Calidris maritima Purple sandpiper Tringa maritima 28682 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalMari1 GCA_045783535.1 NCBI ASM4578353v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 203493 16310863 NULL NULL NULL Calidris_melanotos__Pectoral_sandpiper__HLcalMela1__GCA_045783155.1 Calidris melanotos Pectoral sandpiper Tringa melanotos 240202 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalMela1 GCA_045783155.1 NCBI ASM4578315v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 134332 1575096 NULL NULL NULL Calidris_pugnax__ruff__HLcalPug1__GCA_001431845.1 Calidris pugnax ruff Pavoncella pugnax,Philomachus pugnax,Machetes pugnax 198806 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalPug1 GCA_001431845.1 NCBI ASM143184v1 Scaffold 2015-11-04 BGI 109237 10060041 -1 -1 -1 Calidris_pygmaea__Spoon-billed_sandpiper__HLcalPyg1__GCA_003697955.1 Calidris pygmaea Spoon-billed sandpiper Eurynorhynchus pygmeus,Calidris pygmeus,Eurynorhynchus pygmeum,Platalea pygmea,Calidris pygmea,Eurynorhynchus pygmaeus 425635 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalPyg1 GCA_003697955.1 NCBI ASM369795v1 Scaffold 2018-10-30 Adam Mickiewicz University 189165 3136279 -1 -1 -1 Calidris_ruficollis__Rufous-necked_stint__HLcalRufi1__GCA_045782775.1 Calidris ruficollis Rufous-necked stint Tringa ruficollis,red-necked stint 272047 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalRufi1 GCA_045782775.1 NCBI ASM4578277v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 149537 2595176 NULL NULL NULL Calidris_temminckii__Temmincks_stint__HLcalTemm1__GCA_045781935.1 Calidris temminckii Temmincks stint Tringa temminckii 328946 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris HLcalTemm1 GCA_045781935.1 NCBI ASM4578193v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 107406 6761255 NULL NULL NULL Lymnocryptes_minimus__Jack_snipe__HLlymMini1__GCA_964304605.1 Lymnocryptes minimus Jack snipe Scolopax minima 107379 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Lymnocryptes HLlymMini1 GCA_964304605.1 NCBI bLymMin2.1 Chromosome 2024-11-06 Genoscope 22004483 33033172 NULL NULL NULL Numenius_arquata__Eurasian_curlew__HLnumArq1A__GCA_964106895.1 Numenius arquata Eurasian curlew Scolopax arquata 31919 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Numenius HLnumArq1A GCA_964106895.1 NCBI bNumArq3.hap1.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 2605715 63363742 -1 -1 -1 Scolopax_rusticola__Eurasian_woodcock__HLscoRust1__GCA_964304615.2 Scolopax rusticola Eurasian woodcock 100826 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Scolopax HLscoRust1 GCA_964304615.2 NCBI bScoRus3.2 Chromosome 2025-05-18 Genoscope 33298157 33678863 NULL NULL NULL Tringa_erythropus__Spotted_redshank__HLtriEryt1__GCA_045787125.1 Tringa erythropus Spotted redshank Scolopax erythropus 272050 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Tringa HLtriEryt1 GCA_045787125.1 NCBI ASM4578712v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 197839 17879394 NULL NULL NULL Tringa_flavipes__Lesser_yellowlegs__HLtriFlav1__GCA_045782655.1 Tringa flavipes Lesser yellowlegs Scolopax flavipes 161739 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Tringa HLtriFlav1 GCA_045782655.1 NCBI ASM4578265v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 100986 579100 NULL NULL NULL Tringa_totanus__Common_redshank__HLtriTota1A__GCA_986271405.1 Tringa totanus Common redshank Scolopax totanus 171271 Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Tringa HLtriTota1A GCA_986271405.1 NCBI bTriTot1.hap1.1 Chromosome 2026-07-06 WELLCOME SANGER INSTITUTE 3596000 56285534 NULL NULL NULL Stercorarius_parasiticus__Parasitic_jaeger__HLstePar1__GCA_013396915.1 Stercorarius parasiticus Parasitic jaeger 54059 Aves; Neognathae; Neoaves; Charadriiformes; Stercorariidae; Stercorarius HLstePar1 GCA_013396915.1 NCBI ASM1339691v1 Scaffold 2020-07-10 B10K Consortium 107045 644604 -1 -1 -1 Turnix_velox__Little_buttonquail__HLturVel1__GCA_013400935.1 Turnix velox Little buttonquail Hemipodius velox 2529409 Aves; Neognathae; Neoaves; Charadriiformes; Turnicidae; Turnix HLturVel1 GCA_013400935.1 NCBI ASM1340093v1 Scaffold 2020-07-10 B10K Consortium 44031 151069 -1 -1 -1 Caloenas_nicobarica__Nicobar_pigeon__HLcalNic1__GCA_013398195.1 Caloenas nicobarica Nicobar pigeon 187106 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Caloenas HLcalNic1 GCA_013398195.1 NCBI ASM1339819v1 Scaffold 2020-07-10 B10K Consortium 72340 20885367 -1 -1 -1 Caloenas_nicobarica__Nicobar_pigeon__HLcalNico2A__GCF_036013445.1 Caloenas nicobarica Nicobar pigeon Columba nicobarica 187106 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Caloenas HLcalNico2A GCF_036013445.1 NCBI bCalNic1.hap1 Chromosome 2024-01-26 Vertebrate Genomes Project 25101800 79699707 NULL NULL NULL Columba_guinea__Speckled_pigeon__HLcolGuin1__GCA_032206185.1 Columba guinea Speckled pigeon 135627 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba HLcolGuin1 GCA_032206185.1 NCBI C.guinea_mat1.0 Contig 2023-09-29 University of Utah 7605730 7605730 NULL NULL NULL Columba_livia__rock_pigeon__HLcolLiv2__GCA_000337935.2 Columba livia rock pigeon carrier pigeon,rock dove,domestic pigeon,Columba livia domestica 8932 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba HLcolLiv2 GCA_000337935.2 NCBI Cliv_2.1 Scaffold 2017-12-13 BGI 26627 14233134 -1 -1 -1 Columba_livia__Rock_pigeon__HLcolLivi3__GCF_036013475.1 Columba livia Rock pigeon carrier pigeon,domestic pigeon,Columba livia domestica,rock dove 8932 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba HLcolLivi3 GCF_036013475.1 NCBI bColLiv1.pat.W.v2 Chromosome 2024-04-08 Vertebrate Genomes Project 14042120 68980706 NULL NULL NULL Columba_palumbus__common_wood_pigeon__HLcolPalu1__GCA_965250375.1 Columba palumbus common wood pigeon 8934 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba HLcolPalu1 GCA_965250375.1 NCBI bColPal1.1 Chromosome 2025-04-20 WELLCOME SANGER INSTITUTE 3440717 72549161 NULL NULL NULL Columba_eversmanni__Yellow-eyed_pigeon__HLcolEver1A__GCA_059801445.1 Columba eversmanni Yellow-eyed pigeon 2953369 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba HLcolEver1A GCA_059801445.1 NCBI bColEve1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 15313457 79067959 NULL NULL NULL Columba_delegorguei__Eastern_bronze-naped_pigeon__HLcolDele1A__GCA_059801895.1 Columba delegorguei Eastern bronze-naped pigeon 2953368 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba HLcolDele1A GCA_059801895.1 NCBI bColDeg1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 15561779 70374377 NULL NULL NULL Columba_janthina_nitens__Japanese_wood-pigeon__HLcolJanNit1__GCA_014362705.1 Columba janthina nitens Japanese wood-pigeon Janthoenas nitens 985682 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba; Columba janthina HLcolJanNit1 GCA_014362705.1 NCBI C_janthina_scaffold_01 Scaffold 2020-08-22 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 109998 187831 -1 -1 -1 Columba_livia_gymnocycla__Rock_pigeon__HLcolLiviGym4A__GCA_059932565.1 Columba livia gymnocycla Rock pigeon Columba livia domestica,rock dove,domestic pigeon,carrier pigeon 3698144 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columba; Columba livia HLcolLiviGym4A GCA_059932565.1 NCBI bColLiv6.hap1 Chromosome 2026-08-07 Vertebrate Genomes Project 20983659 79387282 NULL NULL NULL Columbina_picui__picui_ground-dove__HLcolPic1__GCA_013397635.1 Columbina picui picui ground-dove 115618 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Columbina HLcolPic1 GCA_013397635.1 NCBI ASM1339763v1 Scaffold 2020-07-10 B10K Consortium 24994 616882 -1 -1 -1 Leptotila_verreauxi__White-tipped_dove__HLlepVerr1__GCA_055773395.1 Leptotila verreauxi White-tipped dove 135631 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Leptotila HLlepVerr1 GCA_055773395.1 NCBI ASM5577339v1 Scaffold 2026-03-10 Bird 10,000 Genomes (B10K) consortium 120012 403527 NULL NULL NULL Macropygia_unchall__Barred_cuckoo-dove__HLmacUnch1A__GCA_060134225.1 Macropygia unchall Barred cuckoo-dove Columba unchall 1464014 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Macropygia HLmacUnch1A GCA_060134225.1 NCBI bMacUnc1.hap1 Chromosome 2026-08-12 Vertebrate Genomes Project 7074353 78844162 NULL NULL NULL Nesoenas_mayeri__Pink_pigeon__HLnesMay1__GCA_963082525.1 Nesoenas mayeri Pink pigeon Streptopelia mayeri,Columba mayeri 187126 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Nesoenas HLnesMay1 GCA_963082525.1 NCBI bNesMay2.1 Chromosome 2023-08-09 WELLCOME SANGER INSTITUTE 4840756 78184682 -1 -1 -1 Nesoenas_picturatus__Madagascar_turtle-dove__HLnesPict1__GCA_053455885.1 Nesoenas picturatus Madagascar turtle-dove Columba picturata,Streptopelia picturata,Nesoenas picturata 2953424 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Nesoenas HLnesPict1 GCA_053455885.1 NCBI ASM5345588v1 Contig 2025-11-13 MNHN 33114301 33114301 NULL NULL NULL Oena_capensis__Namaqua_dove__HLoenCape1A__GCA_059802365.1 Oena capensis Namaqua dove Columba capensis 115679 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Oena HLoenCape1A GCA_059802365.1 NCBI bOenCap1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 23694818 45361594 NULL NULL NULL Alopecoenas_beccarii__Western_bronze_ground-dove__HLaloBec1__GCA_013399365.1 Alopecoenas beccarii Western bronze ground-dove Gallicolumba beccarii,Gallicolumba beccari 262131 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Pampusana HLaloBec1 GCA_013399365.1 NCBI ASM1339936v1 Scaffold 2020-07-10 B10K Consortium 126523 674421 -1 -1 -1 Pampusana_sanctaecrucis__Santa_Cruz_ground_dove__HLpamSanc1A__GCA_059801495.1 Pampusana sanctaecrucis Santa Cruz ground dove Gallicolumba sanctaecrucis 2953435 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Pampusana HLpamSanc1A GCA_059801495.1 NCBI bPamSan1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 14253908 79402970 NULL NULL NULL Patagioenas_fasciata__Band-tailed_pigeon__HLpatFas2__GCA_036971685.1 Patagioenas fasciata Band-tailed pigeon Columba fasciata 372321 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatFas2 GCA_036971685.1 NCBI bPatFas1.hap2 Chromosome 2024-03-06 Vertebrate Genomes Project 17514312 71505812 -1 -1 -1 Patagioenas_fasciata__Band-tailed_pigeon__HLpatFasc3A__GCF_037038585.1 Patagioenas fasciata Band-tailed pigeon Columba fasciata 372321 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatFasc3A GCF_037038585.1 NCBI bPatFas1.hap1 Chromosome 2025-02-07 Vertebrate Genomes Project 48246320 71669782 NULL NULL NULL Patagioenas_speciosa__Scaled_pigeon__HLpatSpec1A__GCA_060039905.1 Patagioenas speciosa Scaled pigeon Columba speciosa 372313 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatSpec1A GCA_060039905.1 NCBI bPatSpe1.hap1 Chromosome 2026-08-12 Vertebrate Genomes Project 25061543 83337149 NULL NULL NULL Patagioenas_picazuro__Picazuro_pigeon__HLpatPica1A__GCA_060040005.1 Patagioenas picazuro Picazuro pigeon 372314 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatPica1A GCA_060040005.1 NCBI bPatPic1.hap1 Chromosome 2026-08-12 Vertebrate Genomes Project 15764308 79653633 NULL NULL NULL Patagioenas_leucocephala__White-crowned_pigeon__HLpatLeuc1A__GCA_059453225.1 Patagioenas leucocephala White-crowned pigeon Columba leucocephala 372311 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatLeuc1A GCA_059453225.1 NCBI bPatLeu1.hap1 Chromosome 2026-07-16 Vertebrate Genomes Project 13589189 80358555 NULL NULL NULL Patagioenas_squamosa__Scaly-naped_pigeon__HLpatSqua1A__GCA_059453315.1 Patagioenas squamosa Scaly-naped pigeon Columba squamosa 372312 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatSqua1A GCA_059453315.1 NCBI bPatSqu1.hap1 Chromosome 2026-07-16 Vertebrate Genomes Project 12745447 80498690 NULL NULL NULL Patagioenas_cayennensis__Pale-vented_pigeon__HLpatCaye1A__GCA_058972185.1 Patagioenas cayennensis Pale-vented pigeon 372332 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas HLpatCaye1A GCA_058972185.1 NCBI bPatCay1.hap1 Chromosome 2026-07-06 Vertebrate Genomes Project 24358332 79553778 NULL NULL NULL Patagioenas_fasciata_monilis__band-tailed_pigeon__HLpatFas1__GCA_002029285.1 Patagioenas fasciata monilis band-tailed pigeon Columba fasciata 372326 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas; Patagioenas fasciata HLpatFas1 GCA_002029285.1 NCBI NIATT_ARIZONA Scaffold 2017-03-15 University of California, Santa Cruz 17937 19987418 -1 -1 -1 Patagioenas_maculosa_albipennis__Spot-winged_pigeon__HLpatMacuAlb1A__GCA_059453245.1 Patagioenas maculosa albipennis Spot-winged pigeon Columba albipennis,Patagioenas albipennis 372319 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas; Patagioenas maculosa HLpatMacuAlb1A GCA_059453245.1 NCBI bPatAlb1.hap1 Chromosome 2026-07-16 Vertebrate Genomes Project 12451950 79829173 NULL NULL NULL Streptopelia_decaocto__Eurasian_collared-dove__HLstrDec1A__GCA_964273445.1 Streptopelia decaocto Eurasian collared-dove 177147 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Streptopelia HLstrDec1A GCA_964273445.1 NCBI bStrDea1.hap1.1 Chromosome 2024-10-04 WELLCOME SANGER INSTITUTE 2425281 78754139 -1 -1 -1 Streptopelia_turtur__European_turtle_dove__HLstrTur1__GCA_901699155.1 Streptopelia turtur European turtle dove 177155 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Streptopelia HLstrTur1 GCA_901699155.1 NCBI bStrTur1.1 Chromosome 2019-06-05 SC 3790373 80150727 -1 -1 -1 Streptopelia_tranquebarica__Red_collared_dove__HLstrTran1A__GCA_060134295.1 Streptopelia tranquebarica Red collared dove Columba tranquebarica 177154 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Streptopelia HLstrTran1A GCA_060134295.1 NCBI bStrTra1.hap1 Chromosome 2026-08-12 Vertebrate Genomes Project 24152947 79051116 NULL NULL NULL Treron_vernans__Pink-necked_green-pigeon__HLtreVern1A__GCA_059801405.1 Treron vernans Pink-necked green-pigeon Columba vernans 115702 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Treron HLtreVern1A GCA_059801405.1 NCBI bTreVer1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 10661514 80507684 NULL NULL NULL Zenaida_meloda__Pacific_dove__HLzenMelo1A__GCA_059801595.1 Zenaida meloda Pacific dove Columba meloda 115710 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Zenaida HLzenMelo1A GCA_059801595.1 NCBI bZenMel1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 21056306 78834105 NULL NULL NULL Zenaida_macroura__Mourning_dove__HLzenMacr1A__GCA_059802415.1 Zenaida macroura Mourning dove Columba macroura 47245 Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Zenaida HLzenMacr1A GCA_059802415.1 NCBI bZenMac1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 23131870 78981422 NULL NULL NULL Mesitornis_unicolor__brown_roatelo__mesUni1__GCF_000695765.1 Mesitornis unicolor brown roatelo 54374 Aves; Neognathae; Neoaves; Columbimorphae; Mesitornithiformes; Mesitornithidae; Mesitornis mesUni1 GCF_000695765.1 NCBI ASM69576v1 Scaffold 2014-06-02 BGI 22740 47102 -1 -1 -1 Pterocles_burchelli__Burchells_sandgrouse__HLpteBur1__GCA_013397535.1 Pterocles burchelli Burchells sandgrouse 2585816 Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles HLpteBur1 GCA_013397535.1 NCBI ASM1339753v1 Scaffold 2020-07-10 B10K Consortium 43196 594480 -1 -1 -1 Pterocles_gutturalis__yellow-throated_sandgrouse__HLpteGut1__GCA_009769525.1 Pterocles gutturalis yellow-throated sandgrouse 240206 Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles HLpteGut1 GCA_009769525.1 NCBI bPteGut1.pri Chromosome 2019-12-23 Vertebrate Genomes Project 12131577 43262132 -1 -1 -1 Pterocles_orientalis__black-bellied_sandgrouse__HLpteOri1__GCA_011057875.1 Pterocles orientalis black-bellied sandgrouse 227169 Aves; Neognathae; Neoaves; Columbimorphae; Pterocliformes; Pteroclidae; Pterocles HLpteOri1 GCA_011057875.1 NCBI REN_Porient_1.0 Scaffold 2020-03-02 International Fund for Houbara Conservation 48746 1099484 -1 -1 -1 Aramus_guarauna__limpkin__HLaraGua1__GCA_013400195.1 Aramus guarauna limpkin 54356 Aves; Neognathae; Neoaves; Gruiformes; Aramidae; Aramus HLaraGua1 GCA_013400195.1 NCBI ASM1340019v1 Scaffold 2020-07-10 B10K Consortium 62981 810609 -1 -1 -1 Balearica_regulorum_gibbericeps__East_African_grey_crowned-crane__HLbalRegGib2__GCA_011004875.1 Balearica regulorum gibbericeps East African grey crowned-crane Balearica pavonina gibbericeps,grey crowned-crane,Balearica regulorum gibbericepse,grey crowned crane,Balearica pavonina regulorum,South African crowned crane,royal crane 100784 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Balearica; Balearica regulorum HLbalRegGib2 GCA_011004875.1 NCBI bBalReg1.pri Chromosome 2020-03-05 Vertebrate Genomes Project 23326060 82577926 -1 -1 -1 Grus_americana__Whooping_crane__HLgruAme1__GCA_013390085.1 Grus americana Whooping crane Ardea americana,Grus americanus 9117 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Grus HLgruAme1 GCA_013390085.1 NCBI ASM1339008v1 Scaffold 2020-07-06 B10K Consortium 46954 266481 -1 -1 -1 Grus_americana__Whooping_crane__HLgruAmer2__GCF_028858705.1 Grus americana Whooping crane Grus americanus,Ardea americana 9117 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Grus HLgruAmer2 GCF_028858705.1 NCBI bGruAme1.mat Chromosome 2023-02-24 Vertebrate Genomes Project 28324902 82903739 NULL NULL NULL Grus_grus__Eurasian_crane__HLgruGru1A__GCA_964106855.1 Grus grus Eurasian crane Ardea grus 40816 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Grus HLgruGru1A GCA_964106855.1 NCBI bGruGru1.hap1.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 3365458 83713171 -1 -1 -1 Grus_japonensis__Red-crowned_crane__HLgruJapo1__GCA_045298695.1 Grus japonensis Red-crowned crane Japanese crane,Ardea japonensis,Grus japonicus 30415 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Grus HLgruJapo1 GCA_045298695.1 NCBI Grus japonensis_ver3.0 Scaffold 2024-08-22 National Institute for Environmental Studies, Japan 19894845 82897315 NULL NULL NULL Grus_nigricollis__black-necked_crane__HLgruNig1__GCA_004360235.1 Grus nigricollis black-necked crane 40817 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Grus HLgruNig1 GCA_004360235.1 NCBI ASM436023v1 Scaffold 2019-03-22 Sichuan University 17886166 17886166 -1 -1 -1 Leucogeranus_leucogeranus__Siberian_crane__HLleuLeuc1__GCA_053455625.1 Leucogeranus leucogeranus Siberian crane white crane,Bugeranus leucogeranus,Grus leucogeranus 3150944 Aves; Neognathae; Neoaves; Gruiformes; Gruidae; Leucogeranus HLleuLeuc1 GCA_053455625.1 NCBI sysu_Leleuc_2.0 Chromosome 2025-11-13 SUN YAT-SEN UNIVERSITY 21544053 83445140 NULL NULL NULL Heliornis_fulica__sungrebe__HLhelFul1__GCA_013399135.1 Heliornis fulica sungrebe 54369 Aves; Neognathae; Neoaves; Gruiformes; Heliornithidae; Heliornis HLhelFul1 GCA_013399135.1 NCBI ASM1339913v1 Scaffold 2020-07-10 B10K Consortium 53463 389526 -1 -1 -1 Psophia_crepitans__common_trumpeter__HLpsoCre1__GCA_013399095.1 Psophia crepitans common trumpeter 54359 Aves; Neognathae; Neoaves; Gruiformes; Psophiidae; Psophia HLpsoCre1 GCA_013399095.1 NCBI ASM1339909v1 Scaffold 2020-07-10 B10K Consortium 58160 468890 -1 -1 -1 Fulica_atra__Eurasian_coot__HLfulAtr1__GCA_013372525.1 Fulica atra Eurasian coot common coot 9121 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Fulica HLfulAtr1 GCA_013372525.1 NCBI Fatr_1.0 Scaffold 2020-06-24 University of Illinois at Urbana-Champaign 246158 6390841 -1 -1 -1 Gallinula_chloropus__Common_moorhen__HLgalChl1A__GCA_964237585.1 Gallinula chloropus Common moorhen Fulica chloropus 9123 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Gallinula HLgalChl1A GCA_964237585.1 NCBI bGalChl1.hap1.1 Chromosome 2024-08-31 WELLCOME SANGER INSTITUTE 3673000 90336355 -1 -1 -1 Hypotaenidia_okinawae__Okinawa_rail__HLhypOkin1__GCA_027925045.1 Hypotaenidia okinawae Okinawa rail Gallirallus okinawae,Rallus okinawae 2861861 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Hypotaenidia HLhypOkin1 GCA_027925045.1 NCBI Gokinawae_1.0 Scaffold 2022-12-22 National Institute for Environmental Studies, Japan 20705417 101781984 NULL NULL NULL Hypotaenidia_owstoni__Guam_rail__HLhypOwst1__GCA_046605145.1 Hypotaenidia owstoni Guam rail Rallus owstoni,Gallirallus owstoni 2901174 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Hypotaenidia HLhypOwst1 GCA_046605145.1 NCBI ASM4660514v1 Contig 2025-01-12 Iridian Genomes 35906214 35906214 NULL NULL NULL Laterallus_jamaicensis_coturniculus__California_black_rail__HLlatJamCot1__GCA_022605575.1 Laterallus jamaicensis coturniculus California black rail Rallus jamaicensis,Porzana Jamaicensis var. coturniculus 650015 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Laterallus; Laterallus jamaicensis HLlatJamCot1 GCA_022605575.1 NCBI bLatJam1.0.p Scaffold 2022-03-17 UCLA 7445194 21403927 -1 -1 -1 Porphyrio_hochstetteri__South_Island_takahe__HLporHoc1__GCA_020800305.1 Porphyrio hochstetteri South Island takahe Porphyrio mantelli hochstetteri,southern takahe,takahe 439704 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Porphyrio HLporHoc1 GCA_020800305.1 NCBI bPorHoc1.mat.Z.cur Chromosome 2021-11-08 Vertebrate Genomes Project 13461271 71566193 -1 -1 -1 Porzana_porzana__Spotted_crake__HLporPorz1__GCA_982556385.1 Porzana porzana Spotted crake Rallus porzana 670354 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Porzana HLporPorz1 GCA_982556385.1 NCBI B10K-D-SM-22 Scaffold 2026-05-02 Center for Evolutionary Hologenomics, University of Copenhagen 193464 377835 NULL NULL NULL Rallus_aquaticus__Water_rail__HLralAqua1__GCA_965250365.1 Rallus aquaticus Water rail 54496 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Rallus HLralAqua1 GCA_965250365.1 NCBI bRalAqu1.1 Chromosome 2025-04-20 WELLCOME SANGER INSTITUTE 4112000 86795660 NULL NULL NULL Rallus_limicola__Virginia_rail__HLralLim1__GCA_022605955.1 Rallus limicola Virginia rail 156759 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Rallus HLralLim1 GCA_022605955.1 NCBI bRalLim1.0.p Scaffold 2022-03-17 UCLA 11906378 25302669 -1 -1 -1 Zapornia_atra__Henderson_crake__HLzapAtr1__GCA_013400835.1 Zapornia atra Henderson crake 2585822 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Zapornia HLzapAtr1 GCA_013400835.1 NCBI ASM1340083v1 Scaffold 2020-07-10 B10K Consortium 44130 134191 -1 -1 -1 Zapornia_parva__Little_crake__HLzapParv1__GCA_045787165.1 Zapornia parva Little crake Porzana parva,Rallus parvus 2861758 Aves; Neognathae; Neoaves; Gruiformes; Rallidae; Zapornia HLzapParv1 GCA_045787165.1 NCBI ASM4578716v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 161695 14172223 NULL NULL NULL Phoenicopterus_ruber_ruber__American_flamingo__HLphoRub1__GCA_009819775.1 Phoenicopterus ruber ruber American flamingo greater flamingo 9218 Aves; Neognathae; Neoaves; Mirandornithes; Phoenicopteriformes; Phoenicopteridae; Phoenicopterus; Phoenicopterus ruber HLphoRub1 GCA_009819775.1 NCBI bPhoRub2.pri Chromosome 2019-12-31 Vertebrate Genomes Project 14700712 85472901 -1 -1 -1 Podiceps_nigricollis__Black-necked_grebe__HLpodNigr1__GCA_055268915.1 Podiceps nigricollis Black-necked grebe 85099 Aves; Neognathae; Neoaves; Mirandornithes; Podicipediformes; Podicipedidae; Podiceps HLpodNigr1 GCA_055268915.1 NCBI bPodNig5_p1.1 Scaffold 2026-02-17 Canada's national platform for genome sequencing and analysis 1954624 84011633 NULL NULL NULL Podilymbus_podiceps__Pied_billed_grebe__HLpodPod1__GCA_013399565.1 Podilymbus podiceps Pied billed grebe 9252 Aves; Neognathae; Neoaves; Mirandornithes; Podicipediformes; Podicipedidae; Podilymbus HLpodPod1 GCA_013399565.1 NCBI ASM1339956v1 Scaffold 2020-07-10 B10K Consortium 35810 692269 -1 -1 -1 Opisthocomus_hoazin__Hoatzin__HLopiHoaz2A__GCA_030867145.1 Opisthocomus hoazin Hoatzin Opisthocomus hoazin hoazin,Phasianus hoazin 30419 Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus HLopiHoaz2A GCA_030867145.1 NCBI bOpiHoa1.hap1 Chromosome 2023-08-24 Vertebrate Genomes Project 14274197 80946297 NULL NULL NULL Opisthocomus_hoazin__hoatzin__opiHoa1__GCF_000692075.1 Opisthocomus hoazin hoatzin Opisthocomus hoazin hoazin 30419 Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus opiHoa1 GCF_000692075.1 NCBI ASM69207v1 Scaffold 2014-05-19 BGI 28179 2937227 -1 -1 -1 Centropus_bengalensis__lesser_coucal__HLcenBen1__GCA_013400815.1 Centropus bengalensis lesser coucal 1463675 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Centropidae; Centropus HLcenBen1 GCA_013400815.1 NCBI ASM1340081v1 Scaffold 2020-07-10 B10K Consortium 34951 1149962 -1 -1 -1 Centropus_unirufus__Rufous_coucal__HLcenUni1__GCA_013397695.1 Centropus unirufus Rufous coucal 1118519 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Centropidae; Centropus HLcenUni1 GCA_013397695.1 NCBI ASM1339769v1 Scaffold 2020-07-10 B10K Consortium 79469 2055974 -1 -1 -1 Coccyzus_lansbergi__Gray_capped_cuckoo__HLcocLan1__GCA_033558105.1 Coccyzus lansbergi Gray capped cuckoo 357741 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Coccyzidae; Coccyzus HLcocLan1 GCA_033558105.1 NCBI, Harvard 2023-05-11 1622296 1622296 -1 -1 -1 Piaya_cayana__squirrel_cuckoo__HLpiaCay1__GCA_013389865.1 Piaya cayana squirrel cuckoo 33601 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Coccyzidae; Piaya HLpiaCay1 GCA_013389865.1 NCBI ASM1338986v1 Scaffold 2020-07-06 B10K Consortium 44041 133717 -1 -1 -1 Crotophaga_sulcirostris__groove-billed_ani__HLcroSul1__GCA_013397455.1 Crotophaga sulcirostris groove-billed ani 33598 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Crotophagidae; Crotophaga HLcroSul1 GCA_013397455.1 NCBI ASM1339745v1 Scaffold 2020-07-10 B10K Consortium 83601 1692907 -1 -1 -1 Ceuthmochares_aereus__Blue_malkoha__HLceuAer1__GCA_013398935.1 Ceuthmochares aereus Blue malkoha Cuculus aereus 1961834 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Ceuthmochares HLceuAer1 GCA_013398935.1 NCBI ASM1339893v1 Scaffold 2020-07-10 B10K Consortium 29269 163031 -1 -1 -1 Clamator_glandarius__Great_spotted_cuckoo__HLclaGla1__GCA_033459285.1 Clamator glandarius Great spotted cuckoo Cuculus glandarius 78203 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Clamator HLclaGla1 GCA_033459285.1 NCBI BPBGC_Cgla_1.0 Contig 2023-11-09 Brood Parasitic Bird Genomes Consortium 2269972 2269972 -1 -1 -1 Cuculus_canorus__common_cuckoo__HLcucCan2__GCA_017976375.1 Cuculus canorus common cuckoo 55661 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus HLcucCan2 GCA_017976375.1 NCBI bCucCan1.pri Chromosome 2021-04-15 Vertebrate Genomes Project 20797936 78325852 -1 -1 -1 Phaenicophaeus_curvirostris__chestnut-breasted_malkoha__HLphaCur1__GCA_032191515.2 Phaenicophaeus curvirostris chestnut-breasted malkoha Cuculus curvirostris 33595 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Phaenicophaeus HLphaCur1 GCA_032191515.2 NCBI BPBGC_Pcur_1.0 Chromosome 2023-09-29 Brood Parasitic Bird Genomes Consortium 17162444 70715910 -1 -1 -1 Dromococcyx_pavoninus__Pavonine_cuckoo__HLdroPav1__GCA_033558185.1 Dromococcyx pavoninus Pavonine cuckoo 3054325 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Neomorphidae; Dromococcyx HLdroPav1 GCA_033558185.1 NCBI, Harvard 2023-05-11 1835311 1835311 -1 -1 -1 Dromococcyx_pavoninus__Pavonine_cuckoo__HLdroPavo1__GCA_033558185.1 Dromococcyx pavoninus Pavonine cuckoo 3054325 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Neomorphidae; Dromococcyx HLdroPavo1 GCA_033558185.1 NCBI BPBGC_Dpav_1.0 Contig 2023-11-13 Brood Parasitic Bird Genomes Consortium 1835311 1835311 NULL NULL NULL Geococcyx_californianus__greater_roadrunner__HLgeoCal1__GCA_013389885.1 Geococcyx californianus greater roadrunner,roadrunner Saurothera californiana 8947 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Neomorphidae; Geococcyx HLgeoCal1 GCA_013389885.1 NCBI ASM1338988v1 Scaffold 2020-07-06 B10K Consortium 47040 59473 -1 -1 -1 Neomorphus_geoffroyi__Rufous_vented_ground_cuckoo__HLneoGeo1__GCA_033558235.1 Neomorphus geoffroyi Rufous vented ground cuckoo Coccyzus geoffroyi 78208 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Neomorphidae; Neomorphus HLneoGeo1 GCA_033558235.1 NCBI, Harvard 2023-05-11 23989336 23989336 -1 -1 -1 Tapera_naevia__Striped_cuckoo__HLtapNae1__GCA_033556795.1 Tapera naevia Striped cuckoo 78212 Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Neomorphidae; Tapera HLtapNae1 GCA_033556795.1 NCBI, Harvard 2023-05-11 8509748 8509748 -1 -1 -1 Corythaeola_cristata__Great_blue_turaco__HLcorCris1__GCA_013396815.1 Corythaeola cristata Great blue turaco Musophaga cristata 103954 Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Corythaeola HLcorCris1 GCA_013396815.1 NCBI ASM1339681v1 Scaffold 2020-07-10 B10K Consortium 7216 102987 NULL NULL NULL Corythaixoides_concolor__grey_go-away-bird__HLcorCon1__GCA_013399495.1 Corythaixoides concolor grey go-away-bird 103956 Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Corythaixoides HLcorCon1 GCA_013399495.1 NCBI ASM1339949v1 Scaffold 2020-07-10 B10K Consortium 52683 1108645 -1 -1 -1 Tauraco_erythrolophus__red-crested_turaco__HLtauEry1__GCA_009769465.1 Tauraco erythrolophus red-crested turaco 121530 Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco HLtauEry1 GCA_009769465.1 NCBI bTauEry1.pri Chromosome 2019-12-19 Vertebrate Genomes Project 11927027 85562082 -1 -1 -1 Tauraco_leucotis__White-cheeked_turaco__HLtauLeuc1__GCA_041045085.1 Tauraco leucotis White-cheeked turaco Tauraco leucotis (Rùˆppell,Menelikornis leucotis, 1835) 119416 Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco HLtauLeuc1 GCA_041045085.1 NCBI ASM4104508v1 Scaffold 2024-08-05 Iridian Genomes 843 1814163 NULL NULL NULL Ardeotis_kori__Kori_bustard__HLardKor1__GCA_013396375.1 Ardeotis kori Kori bustard 89386 Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Ardeotis HLardKor1 GCA_013396375.1 NCBI ASM1339637v1 Scaffold 2020-07-10 B10K Consortium 53368 639944 -1 -1 -1 Chlamydotis_macqueenii__Macqueens_bustard__HLchlMacq2__GCA_036417535.1 Chlamydotis macqueenii Macqueens bustard Chlamydotis macqueenii macqueenii,Chlamydotis macqueenii macqueeni,Chlamydotis undulata macqueenii,Otis macqueenii 187382 Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Chlamydotis HLchlMacq2 GCA_036417535.1 NCBI bChlMac1.mat Chromosome 2024-02-07 Vertebrate Genomes Project 25335467 84623986 NULL NULL NULL Chlamydotis_undulata_undulata__Houbara_bustard__HLchlUndUnd1__GCA_003400225.2 Chlamydotis undulata undulata Houbara bustard 187383 Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Chlamydotis; Chlamydotis undulata HLchlUndUnd1 GCA_003400225.2 NCBI REN_Cundu_1.1 Scaffold 2020-12-15 International Fund for Houbara Conservation 90121 3265787 -1 -1 -1 Lophotis_ruficrista__Red_crested_korhaan__HLlopRuf1__GCA_013396455.1 Lophotis ruficrista Red crested korhaan Eupodotis ruficrista 172689 Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Lophotis HLlopRuf1 GCA_013396455.1 NCBI ASM1339645v1 Scaffold 2020-07-10 B10K Consortium 57900 702395 -1 -1 -1 Otis_tarda__Great_bustard__HLotiTar1__GCA_026413225.1 Otis tarda Great bustard 73107 Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Otis HLotiTar1 GCA_026413225.1 NCBI OTswu Chromosome 2022-11-27 Southwest University 40962436 82831862 -1 -1 -1 Tetrax_tetrax__Little_bustard__HLtetTet1__GCA_009806455.1 Tetrax tetrax Little bustard 172684 Aves; Neognathae; Neoaves; Otidimorphae; Otidiformes; Otididae; Tetrax HLtetTet1 GCA_009806455.1 NCBI REN_Tetrax_1.0 Scaffold 2019-12-27 International Fund for Houbara Conservation 43434 389676 -1 -1 -1 Eurypyga_helias__sunbittern__eurHel1__GCF_000690775.1 Eurypyga helias sunbittern 54383 Aves; Neognathae; Neoaves; Phaethontimorphae; Eurypygiformes; Eurypygidae; Eurypyga eurHel1 GCF_000690775.1 NCBI ASM69077v1 Scaffold 2014-05-13 BGI 24402 47243 -1 -1 -1 Rhynochetos_jubatus__kagu__HLrhyJub1__GCA_013398095.1 Rhynochetos jubatus kagu Rhynochetus jubatus 54386 Aves; Neognathae; Neoaves; Phaethontimorphae; Eurypygiformes; Rhynochetidae; Rhynochetos HLrhyJub1 GCA_013398095.1 NCBI ASM1339809v1 Scaffold 2020-07-10 B10K Consortium 91152 965071 -1 -1 -1 Rhynochetos_jubatus__Kagu__HLrhyJuba2__GCA_027574665.1 Rhynochetos jubatus Kagu Rhynochetus jubatus 54386 Aves; Neognathae; Neoaves; Phaethontimorphae; Eurypygiformes; Rhynochetidae; Rhynochetos HLrhyJuba2 GCA_027574665.1 NCBI bRhyJub1.pri Chromosome 2023-01-09 Vertebrate Genomes Project 10485863 63592491 NULL NULL NULL Phaethon_aethereus__red-billed_tropicbird__HLphaAet1A__GCA_964289735.1 Phaethon aethereus red-billed tropicbird 37045 Aves; Neognathae; Neoaves; Phaethontimorphae; Phaethontiformes; Phaethontidae; Phaethon HLphaAet1A GCA_964289735.1 NCBI bPhaAeh10.maternal.1 Chromosome 2024-10-28 WELLCOME SANGER INSTITUTE 2122569 85546101 -1 -1 -1 Phaethon_lepturus__White-tailed_tropicbird__phaLep1__GCF_000687285.1 Phaethon lepturus White-tailed tropicbird 97097 Aves; Neognathae; Neoaves; Phaethontimorphae; Phaethontiformes; Phaethontidae; Phaethon phaLep1 GCF_000687285.1 NCBI ASM68728v1 Scaffold 2014-05-08 BGI 22941 47896 -1 -1 -1 Apus_apus__common_swift__HLapuApu1 Apus apus common swift swift,Eurasian swift,Mauersegler,Hirundo apus 8895 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Apus HLapuApu1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2020-08-24 35443559 115531037 -1 -1 -1 Apus_caffer__White-rumped_swift__HLapuCaff1__GCA_045787225.1 Apus caffer White-rumped swift Cypselus caffer 1002741 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Apus HLapuCaff1 GCA_045787225.1 NCBI ASM4578722v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 196189 14846650 NULL NULL NULL Chaetura_pelagica__chimney_swift__HLchaPel1__GCF_000747805.1 Chaetura pelagica chimney swift 8897 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura HLchaPel1 GCF_000747805.1 NCBI ChaPel_1.0 Scaffold 2014-09-04 BGI 30757 3841852 -1 -1 -1 Hemiprocne_comata__whiskered_treeswift__HLhemCom1__GCA_013396855.1 Hemiprocne comata whiskered treeswift 243314 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Hemiprocninae; Hemiprocne HLhemCom1 GCA_013396855.1 NCBI 2018-02-13 58948 355677 -1 -1 -1 Hemiprocne_comata__Whiskered_treeswift__HLhemCom2__GCA_020745705.1 Hemiprocne comata Whiskered treeswift Cypselus comatus 243314 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Hemiprocninae; Hemiprocne HLhemCom2 GCA_020745705.1 NCBI bHemCom1.pri.cur Chromosome 2021-11-05 Vertebrate Genomes Project 20531774 91346199 -1 -1 -1 Archilochus_colubris__Ruby_throated_hummingbird__HLarcCol1__GCA_023079485.1 Archilochus colubris Ruby throated hummingbird ruby-throated hummingbird,Trochilus colubris 190676 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Archilochus HLarcCol1 GCA_023079485.1 NCBI ASM2307948v1 Chromosome 2022-04-22 Johns Hopkins University 12033856 46260142 -1 -1 -1 Calypte_anna__Annas_hummingbird__HLcalAnn5__GCA_003957555.1 Calypte anna Annas hummingbird 9244 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte HLcalAnn5 GCA_003957555.1 NCBI bCalAnn1_v1.p Chromosome 2019-05-16 Vertebrate Genomes Project 14522327 74081004 -1 -1 -1 Chalcostigma_stanleyi__Blue-mantled_thornbill__HLchaStan1A__GCA_054051245.1 Chalcostigma stanleyi Blue-mantled thornbill Trochilus stanleyi 689208 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Chalcostigma HLchaStan1A GCA_054051245.1 NCBI bChaSta1.hap1 Chromosome 2025-12-17 University of Copenhagen 1621151 72296937 NULL NULL NULL Florisuga_fusca__black_jacobin__HLfloFus1__GCA_038090715.1 Florisuga fusca black jacobin Florisuga fuscus 689215 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Florisuga HLfloFus1 GCA_038090715.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2019-07-20 197428 23868549 -1 -1 -1 Heliangelus_exortis__tourmaline_sunangel__HLhelExor1A__GCF_036169615.1 Heliangelus exortis tourmaline sunangel Trochilus exortis 472823 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Heliangelus HLhelExor1A GCF_036169615.1 NCBI bHelExo1.hap1 Chromosome 2024-01-26 Vertebrate Genomes Project 8413062 73898144 NULL NULL NULL Oreotrochilus_melanogaster__black-breasted_hillstar__HLoreMel1__GCA_013400995.1 Oreotrochilus melanogaster black-breasted hillstar 689266 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Oreotrochilus HLoreMel1 GCA_013400995.1 NCBI 2018-01-27 6248 163435 -1 -1 -1 Phaethornis_superciliosus__long-tailed_hermit__HLphaSup1__GCA_023637945.1 Phaethornis superciliosus long-tailed hermit 46513 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Phaethornis HLphaSup1 GCA_023637945.1 NCBI, MPI-CBG 2021-03-09 35194150 72710393 -1 -1 -1 Selasphorus_platycercus__Broad-tailed_hummingbird__HLselPlat1__GCA_054372455.1 Selasphorus platycercus Broad-tailed hummingbird Trochilus platycercus 240704 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Selasphorus HLselPlat1 GCA_054372455.1 NCBI SelPlat_v1 Chromosome 2026-01-06 UC Berkeley 27428828 72349162 NULL NULL NULL Selasphorus_sasin__Allens_hummingbird__HLselSasi1__GCA_043774175.1 Selasphorus sasin Allens hummingbird Ornismya sasin 371924 Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Selasphorus HLselSasi1 GCA_043774175.1 NCBI bSelSas1.0.p Scaffold 2024-10-24 University of California, Santa Cruz 13046376 74144985 NULL NULL NULL Aegotheles_albertisi__Mountain_owlet-nightjar__HLaegAlbe1A__GCA_039906565.1 Aegotheles albertisi Mountain owlet-nightjar 48277 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Aegothelidae; Aegotheles HLaegAlbe1A GCA_039906565.1 NCBI bAegAlb1.hap1 Chromosome 2024-05-31 Vertebrate Genomes Project 9620782 46898397 NULL NULL NULL Aegotheles_bennettii__Bennetts_owlet_nightjar__HLaegBen1__GCA_013398125.1 Aegotheles bennettii Bennetts owlet nightjar 48278 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Aegothelidae; Aegotheles HLaegBen1 GCA_013398125.1 NCBI ASM1339812v1 Scaffold 2020-07-10 B10K Consortium 65833 324808 -1 -1 -1 Antrostomus_carolinensis__Chuck-wills-widow__capCar1__GCF_000700745.1 Antrostomus carolinensis Chuck-wills-widow Caprimulgus carolinensis 279965 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Antrostomus capCar1 GCF_000700745.1 NCBI ASM70074v1 Scaffold 2014-06-10 BGI 22156 46345 -1 -1 -1 Caprimulgus_europaeus__Eurasian_nightjar__HLcapEur1__GCA_907165065.1 Caprimulgus europaeus Eurasian nightjar common nightjar,Ziegenmelker,nightjar 111811 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Caprimulginae; Caprimulgus HLcapEur1 GCA_907165065.1 NCBI bCapEur3.1 Chromosome 2021-05-17 WELLCOME SANGER INSTITUTE 30622946 82614289 -1 -1 -1 Chordeiles_acutipennis__lesser_nighthawk__HLchoAcu1__GCA_013399635.1 Chordeiles acutipennis lesser nighthawk 118183 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Chordeilinae; Chordeiles HLchoAcu1 GCA_013399635.1 NCBI ASM1339963v1 Scaffold 2020-07-10 B10K Consortium 40733 630207 -1 -1 -1 Nyctiprogne_leucopyga__Band-tailed_nighthawk__HLnycLeu1__GCA_013399395.1 Nyctiprogne leucopyga Band-tailed nighthawk 382315 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Caprimulgidae; Chordeilinae; Nyctiprogne HLnycLeu1 GCA_013399395.1 NCBI ASM1339939v1 Scaffold 2020-07-10 B10K Consortium 28894 190423 -1 -1 -1 Podargus_strigoides__tawny_frogmouth__HLpodStr1__GCA_013399755.1 Podargus strigoides tawny frogmouth 8905 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Podargidae; Podargus HLpodStr1 GCA_013399755.1 NCBI ASM1339975v1 Scaffold 2020-07-10 B10K Consortium 80636 176118 -1 -1 -1 Podargus_strigoides__Tawny_frogmouth__HLpodStri2__GCA_028020825.1 Podargus strigoides Tawny frogmouth Caprimulgus strigoides 8905 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Podargidae; Podargus HLpodStri2 GCA_028020825.1 NCBI bPodStr1.pri Chromosome 2023-01-31 Vertebrate Genomes Project 11637970 58393285 NULL NULL NULL Steatornis_caripensis__Oilbird__HLsteCari4A__GCA_054099775.1 Steatornis caripensis Oilbird 48435 Aves; Neognathae; Neoaves; Strisores; Caprimulgiformes; Steatornithidae; Steatornis HLsteCari4A GCA_054099775.1 NCBI bSteCar1.hap1 Chromosome 2025-12-18 Vertebrate Genomes Project 44324291 84204331 NULL NULL NULL Nyctibius_bracteatus__Rufous_potoo__HLnycBra1__GCA_013396595.1 Nyctibius bracteatus Rufous potoo Phyllaemulor bracteatus 48426 Aves; Neognathae; Neoaves; Strisores; Nyctibiiformes; Nyctibiidae; Nyctibius HLnycBra1 GCA_013396595.1 NCBI ASM1339659v1 Scaffold 2020-07-10 B10K Consortium 33238 380686 -1 -1 -1 Nyctibius_grandis__Great_potoo__HLnycGra1__GCA_013368605.1 Nyctibius grandis Great potoo 48427 Aves; Neognathae; Neoaves; Strisores; Nyctibiiformes; Nyctibiidae; Nyctibius HLnycGra1 GCA_013368605.1 NCBI bNycGra1.pri Chromosome 2020-06-23 Vertebrate Genomes Project 23231768 92359233 -1 -1 -1 Accipiter_cooperii__Coopers_hawk__HLaccCoo1__GCA_024222105.1 Accipiter cooperii Coopers hawk Falco cooperii,Accipiter cooperi 261198 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter HLaccCoo1 GCA_024222105.1 NCBI ASM2422210v1 Scaffold 2022-07-12 Iridian Genomes 5194 35883487 -1 -1 -1 Accipiter_gularis__Japanese_sparrowhawk__HLaccGula1__GCA_046127185.1 Accipiter gularis Japanese sparrowhawk Melierax gularis 258530 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter HLaccGula1 GCA_046127185.1 NCBI Aguhap1 Chromosome 2024-12-18 Nanjing Normal University 120487 43192241 NULL NULL NULL Accipiter_hiogaster__Variable_goshawk__HLaccHio1__GCA_024363185.1 Accipiter hiogaster Variable goshawk 2868207 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter HLaccHio1 GCA_024363185.1 NCBI ASM2436318v1 Scaffold 2022-07-21 Iridian Genomes 10998 36339272 -1 -1 -1 Accipiter_melanochlamys__Black-mantled_goshawk__HLaccMela1__GCA_027497775.1 Accipiter melanochlamys Black-mantled goshawk Urospizias melanochlamys 387799 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter HLaccMela1 GCA_027497775.1 NCBI ASM2749777v1 Scaffold 2022-12-30 Iridian Genomes 17712854 35025567 NULL NULL NULL Accipiter_nisus__Eurasian_sparrowhawk__HLaccNisu1A__GCA_978019825.1 Accipiter nisus Eurasian sparrowhawk Falco nisus 211598 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Accipiter HLaccNisu1A GCA_978019825.1 NCBI bAccNis1.hap1.1 Chromosome 2026-02-01 WELLCOME SANGER INSTITUTE 3865455 44142104 NULL NULL NULL Aquila_nipalensis__steppe_eagle__HLaquNip1__GCA_024363155.1 Aquila nipalensis steppe eagle Aquila rapax nipalensis 193005 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila HLaquNip1 GCA_024363155.1 NCBI ASM2436315v1 Scaffold 2022-07-21 Iridian Genomes 28788 47036150 -1 -1 -1 Aquila_chrysaetos_chrysaetos__golden_eagle__HLaquChrChr3__GCA_900496995.3 Aquila chrysaetos chrysaetos golden eagle 223781 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila; Aquila chrysaetos HLaquChrChr3 GCA_900496995.3 NCBI bAquChr1.3 Chromosome 2020-07-31 SC 21924221 46934974 -1 -1 -1 Accipiter_gentilis__Northern_goshawk__HLaccGen2__GCA_929443795.1 Accipiter gentilis Northern goshawk Falco gentilis,Eurasian goshawk,Accipiter gentillis,goshawk,Habicht 8957 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Astur HLaccGen2 GCA_929443795.1 NCBI bAccGen1.1 Chromosome 2022-02-09 WELLCOME SANGER INSTITUTE 17712854 35025567 -1 -1 -1 Astur_gentilis__Northern_goshawk__HLastGent1__GCA_929443795.2 Astur gentilis Northern goshawk Falco gentilis,Habicht,Accipiter gentillis,Eurasian goshawk,Accipiter gentilis,goshawk 8957 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Astur HLastGent1 GCA_929443795.2 NCBI bAccGen1.2 Chromosome 2022-10-27 WELLCOME SANGER INSTITUTE 17712854 35025567 NULL NULL NULL Buteo_buteo__Common_buzzard__HLbutBut1A__GCA_964188355.1 Buteo buteo Common buzzard Falco buteo 30397 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Buteo HLbutBut1A GCA_964188355.1 NCBI bButBut1.hap1.1 Chromosome 2024-06-21 WELLCOME SANGER INSTITUTE 4249591 46961128 -1 -1 -1 Buteo_japonicus__Eastern_buzzard__HLbutJap1__GCA_010312235.1 Buteo japonicus Eastern buzzard 224669 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Buteo HLbutJap1 GCA_010312235.1 NCBI ButJap1.0 Scaffold 2020-02-04 GEROMICS 36723 7468869 -1 -1 -1 Buteo_regalis__Ferruginous_hawk__HLbutRega1__GCA_037951015.2 Buteo regalis Ferruginous hawk Archibuteo regalis 223441 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Buteo HLbutRega1 GCA_037951015.2 NCBI bButReg1_p1.2 Scaffold 2025-07-18 Canada's national platform for genome sequencing and analysis 36034577 47673586 NULL NULL NULL Buteo_rufinus__Long-legged_buzzard__HLbutRufi1__GCA_045784765.1 Buteo rufinus Long-legged buzzard Falco rufinus 115134 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Buteo HLbutRufi1 GCA_045784765.1 NCBI ASM4578476v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 192469 16247038 NULL NULL NULL Circaetus_pectoralis__black-chested_snake-eagle__HLcirPec1__GCA_013399555.1 Circaetus pectoralis black-chested snake-eagle Circaetus gallicus pectoralis 321084 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Circaetus HLcirPec1 GCA_013399555.1 NCBI ASM1339955v1 Scaffold 2020-07-10 B10K Consortium 28952 1302531 -1 -1 -1 Circus_aeruginosus__Western_marsh_harrier__HLcirAeru1__GCA_045784585.1 Circus aeruginosus Western marsh harrier marsh harrier,Falco aeruginosus 8964 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Circus HLcirAeru1 GCA_045784585.1 NCBI ASM4578458v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 197889 10156871 NULL NULL NULL Circus_cyaneus__Hen_harrier__HLcirCyan1__GCA_045785005.1 Circus cyaneus Hen harrier Falco cyaneus 43466 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Circus HLcirCyan1 GCA_045785005.1 NCBI ASM4578500v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 195392 7830633 NULL NULL NULL Elanus_caeruleus__Black-winged_kite__HLelaCaer1__GCA_982554285.1 Elanus caeruleus Black-winged kite Falco caeruleus 387830 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Elanus HLelaCaer1 GCA_982554285.1 NCBI B10K-D-MNHN-56 Scaffold 2026-05-03 Center for Evolutionary Hologenomics, University of Copenhagen 87233 158423 NULL NULL NULL Elanus_axillaris__Black-shouldered_kite__HLelaAxil1__GCA_026212715.1 Elanus axillaris Black-shouldered kite Falco axillaris 387829 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Elanus HLelaAxil1 GCA_026212715.1 NCBI ASM2621271v1 Scaffold 2022-11-16 Iridian Genomes 30028 35952584 NULL NULL NULL Gypaetus_barbatus__Lammergeier__HLgypBarb1__GCA_028022735.1 Gypaetus barbatus Lammergeier Vultur barbatus,Laemmergeier 33610 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Gypaetus HLgypBarb1 GCA_028022735.1 NCBI bGypBar2.pri Chromosome 2023-01-31 Vertebrate Genomes Project 18064636 52189775 NULL NULL NULL Gyps_africanus__White-backed_vulture__HLgypAfri1__GCA_041146915.1 Gyps africanus White-backed vulture 43490 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Gyps HLgypAfri1 GCA_041146915.1 NCBI Meer_Gafri2_1 Scaffold 2024-08-08 Wageningen University and Research 22038010 22038010 NULL NULL NULL Gyps_himalayensis__Himalayan_griffon__HLgypHim1__GCA_021398385.1 Gyps himalayensis Himalayan griffon 36248 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Gyps HLgypHim1 GCA_021398385.1 NCBI ASM2139838v1 Contig 2022-01-10 Wuhan University 3972749 3972749 -1 -1 -1 Haliaeetus_albicilla__white-tailed_eagle__HLhalAlb2__GCA_013398555.1 Haliaeetus albicilla white-tailed eagle Falco albicilla 8969 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus HLhalAlb2 GCA_013398555.1 NCBI ASM1339855v1 Scaffold 2020-07-10 B10K Consortium 134899 4551471 -1 -1 -1 Haliaeetus_albicilla__White-tailed_eagle__HLhalAlbi3__GCF_947461875.1 Haliaeetus albicilla White-tailed eagle Falco albicilla 8969 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus HLhalAlbi3 GCF_947461875.1 NCBI bHalAlb1.1 Chromosome 2022-12-06 WELLCOME SANGER INSTITUTE 4576000 44398590 NULL NULL NULL Haliaeetus_pelagicus__Stellers_sea-eagle__HLhalPel1__GCA_014363185.1 Haliaeetus pelagicus Stellers sea-eagle Aquila pelagica,Thallasoaetus pelagicus 52647 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus HLhalPel1 GCA_014363185.1 NCBI H_pelagicus_scaffold_01 Scaffold 2020-08-22 Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies 86631 179278 -1 -1 -1 Haliaeetus_leucocephalus__bald_eagle__halLeu1__GCF_000737465.1 Haliaeetus leucocephalus bald eagle 52644 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus halLeu1 GCF_000737465.1 NCBI Haliaeetus_leucocephalus-4.0 Scaffold 2014-08-04 The Bald Eagle Consortium 105493 9145499 -1 -1 -1 Harpia_harpyja__Harpy_eagle__HLharHarp1__GCF_026419915.1 Harpia harpyja Harpy eagle Vultur harpyja 202280 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Harpia HLharHarp1 GCF_026419915.1 NCBI bHarHar1 primary haplotype Chromosome 2022-11-27 Vertebrate Genomes Project 16799191 58111031 -1 -1 -1 Morphnus_guianensis__Crested_eagle__HLmorGuia1__GCA_045345515.1 Morphnus guianensis Crested eagle Falco guianensis 252789 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Morphnus HLmorGuia1 GCA_045345515.1 NCBI bMorGui1 haplotype 2 Chromosome 2024-12-02 Instituto Tecnologico Vale 26372894 61450600 NULL NULL NULL Necrosyrtes_monachus__Hooded_vulture__HLnecMona1__GCA_037953605.1 Necrosyrtes monachus Hooded vulture Neophron monachus,Cathartes monachus 30399 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Necrosyrtes HLnecMona1 GCA_037953605.1 NCBI ASM3795360v1 Scaffold 2024-04-03 Wageningen University and Research 25204291 27959869 NULL NULL NULL Nisaetus_nipalensis__mountain_hawk-eagle__HLnisNip1__GCA_012487455.1 Nisaetus nipalensis mountain hawk-eagle Spizaetus nipalensis 214438 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Nisaetus HLnisNip1 GCA_012487455.1 NCBI Nnipalensis_1.0 Scaffold 2020-04-08 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 56477 116003 -1 -1 -1 Parabuteo_unicinctus__Harris_hawk__HLparUnic1__GCA_025311615.1 Parabuteo unicinctus Harris hawk Falco unicinctus,Parabuteo unicintus 223492 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Parabuteo HLparUnic1 GCA_025311615.1 NCBI ASM2531161v1 Scaffold 2022-09-20 Iridian Genomes 1227 34879618 NULL NULL NULL Sarcogyps_calvus__Red-headed_vulture__HLsarCalv1__GCA_040869245.1 Sarcogyps calvus Red-headed vulture Vultur calvus 43579 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Sarcogyps HLsarCalv1 GCA_040869245.1 NCBI ASM4086924v1 Contig 2024-07-25 Chulalongkorn University 28731705 28731705 NULL NULL NULL Spizaetus_tyrannus__black_hawk-eagle__HLspiTyr1__GCA_013399215.1 Spizaetus tyrannus black hawk-eagle 252798 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Spizaetus HLspiTyr1 GCA_013399215.1 NCBI ASM1339921v1 Scaffold 2020-07-10 B10K Consortium 72446 1501215 -1 -1 -1 Coragyps_atratus__Black_vulture__HLcorAtra2__GCA_055772195.1 Coragyps atratus Black vulture Vultur atratus 33614 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Coragyps HLcorAtra2 GCA_055772195.1 NCBI ASM5577219v1 Scaffold 2026-03-10 Bird 10,000 Genomes (B10K) consortium 46691 363760 NULL NULL NULL Gymnogyps_californianus__California_condor__HLgymCal1 Gymnogyps californianus California condor 33616 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Gymnogyps HLgymCal1 DNA Zoo Consortium DNA Zoo Consortium 2021-10-21 17075248 85346818 -1 -1 -1 Sarcoramphus_papa__King_vulture__HLsarPapa1A__GCA_037962945.1 Sarcoramphus papa King vulture Vultur papa,Sarcorhamphus papa 43583 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Sarcoramphus HLsarPapa1A GCA_037962945.1 NCBI bSarPap1.hap1 Chromosome 2024-04-04 Vertebrate Genomes Project 40899883 96420541 NULL NULL NULL Vultur_gryphus__Andean_condor__HLvulGryp1__GCA_039700855.2 Vultur gryphus Andean condor Sarcoramphus gryphus 8924 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Cathartidae; Vultur HLvulGryp1 GCA_039700855.2 NCBI bVulGry1 Chromosome 2025-05-07 University of Buenos Aires 21673 84949164 NULL NULL NULL Pandion_haliaetus__Osprey__HLpanHali1__GCA_013401275.1 Pandion haliaetus Osprey Falco halioetus 56262 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Pandionidae; Pandion HLpanHali1 GCA_013401275.1 NCBI ASM1340127v1 Scaffold 2020-07-10 B10K Consortium 23447 104045 NULL NULL NULL Sagittarius_serpentarius__Secretarybird__HLsagSer1__GCA_013399415.1 Sagittarius serpentarius Secretarybird 56258 Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Sagittariidae; Sagittarius HLsagSer1 GCA_013399415.1 NCBI ASM1339941v1 Scaffold 2020-07-10 B10K Consortium 36754 129671 -1 -1 -1 Cariama_cristata__Red-legged_seriema__HLcarCri1__GCA_009819825.1 Cariama cristata Red-legged seriema 54380 Aves; Neognathae; Neoaves; Telluraves; Australaves; Cariamiformes; Cariamidae; Cariama HLcarCri1 GCA_009819825.1 NCBI bCarCri1.pri Chromosome 2019-12-31 Vertebrate Genomes Project 13514148 30176635 -1 -1 -1 Chunga_burmeisteri__Black-legged_seriema__HLchuBur1__GCA_013396505.1 Chunga burmeisteri Black-legged seriema Dicholophus burmeisteri 1352770 Aves; Neognathae; Neoaves; Telluraves; Australaves; Cariamiformes; Cariamidae; Chunga HLchuBur1 GCA_013396505.1 NCBI ASM1339650v1 Scaffold 2020-07-10 B10K Consortium 72519 1413557 -1 -1 -1 Falco_biarmicus__lanner_falcon__HLfalBia1__GCA_023638135.1 Falco biarmicus lanner falcon 345155 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalBia1 GCA_023638135.1 NCBI bFalBia1.pri Chromosome 2022-06-02 Vertebrate Genomes Project 24892811 91472507 -1 -1 -1 Falco_cherrug__Saker_falcon__HLfalChe2__GCA_023634085.1 Falco cherrug Saker falcon 345164 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalChe2 GCA_023634085.1 NCBI bFalChe1.pri Chromosome 2022-06-02 Vertebrate Genomes Project 21245687 92426045 -1 -1 -1 Falco_eleonorae__Eleonoras_falcon__HLfalEleo1__GCA_045787805.1 Falco eleonorae Eleonoras falcon 495946 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalEleo1 GCA_045787805.1 NCBI ASM4578780v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 205385 26400415 NULL NULL NULL Falco_naumanni__lesser_kestrel__HLfalNau1__GCF_017639655.2 Falco naumanni lesser kestrel 148594 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalNau1 GCF_017639655.2 NCBI bFalNau1.pat Chromosome 2021-03-30 Vertebrate Genomes Project 13754753 91761059 -1 -1 -1 Falco_pelegrinoides__Barbary_falcon__HLfalPel1__GCA_024432695.1 Falco pelegrinoides Barbary falcon Falco peregrinus pelegrinoides 491646 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalPel1 GCA_024432695.1 NCBI Barbary10X.pri Scaffold 2022-07-25 New York University Abu Dhabi 127856 26062782 -1 -1 -1 Falco_peregrinus__peregrine_falcon__HLfalPer2__GCA_012488915.1 Falco peregrinus peregrine falcon Wanderfalke,peregrine 8954 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalPer2 GCA_012488915.1 NCBI Fperegrinus_1.0 Scaffold 2020-04-08 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 88635 194737 -1 -1 -1 Falco_peregrinus__peregrine_falcon__HLfalPer3__GCA_023634155.1 Falco peregrinus peregrine falcon Wanderfalke,peregrine 8954 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalPer3 GCA_023634155.1 NCBI bFalPer1.pri Chromosome 2022-06-02 Vertebrate Genomes Project 15744644 93682670 -1 -1 -1 Falco_punctatus__Mauritius_kestrel__HLfalPunc1__GCA_963210335.1 Falco punctatus Mauritius kestrel 148596 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalPunc1 GCA_963210335.1 NCBI bFalPun1.1 Chromosome 2023-08-19 WELLCOME SANGER INSTITUTE 4755657 92385878 NULL NULL NULL Falco_rusticolus__gyrfalcon__HLfalRus1__GCA_015220075.1 Falco rusticolus gyrfalcon 120794 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalRus1 GCA_015220075.1 NCBI bFalRus1.pri Chromosome 2020-11-03 Vertebrate Genomes Project 15323486 91094845 -1 -1 -1 Falco_sparverius__American_kestrel__HLfalSpar1__GCA_034782035.1 Falco sparverius American kestrel Cerchneis sparveria 56350 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalSpar1 GCA_034782035.1 NCBI ASM3478203v1 Scaffold 2023-12-28 Iridian Genomes 3001 37382377 NULL NULL NULL Falco_tinnunculus__common_kestrel__HLfalTin1__GCA_010332995.1 Falco tinnunculus common kestrel Turmfalke 100819 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalTin1 GCA_010332995.1 NCBI FalTin1.0 Scaffold 2020-02-04 GEROMICS 37053 21232185 -1 -1 -1 Falco_cenchroides__Nankeen_kestrel__HLfalCenc1__GCA_025727955.1 Falco cenchroides Nankeen kestrel 148593 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco HLfalCenc1 GCA_025727955.1 NCBI ASM2572795v1 Scaffold 2022-10-17 Iridian Genomes 34929 90928354 NULL NULL NULL Herpetotheres_cachinnans__Laughing_falcon__HLherCac1__GCA_013399355.1 Herpetotheres cachinnans Laughing falcon 56343 Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Herpetotheres HLherCac1 GCA_013399355.1 NCBI ASM1339935v1 Scaffold 2020-07-10 B10K Consortium 61768 1830427 -1 -1 -1 Acanthisitta_chloris__rifleman__HLacaChl2__GCA_016904835.1 Acanthisitta chloris rifleman Sitta chloris 57068 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta HLacaChl2 GCA_016904835.1 NCBI bAcaChl1.pri Chromosome 2021-02-17 Vertebrate Genomes Project 16681756 40827287 -1 -1 -1 Gymnorhina_tibicen__Australian_magpie__HLgymTib1__GCA_013399875.1 Gymnorhina tibicen Australian magpie Cracticus tibicen 9132 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Artamidae; Gymnorhina HLgymTib1 GCA_013399875.1 NCBI ASM1339987v1 Scaffold 2020-07-10 B10K Consortium 140542 1191429 -1 -1 -1 Bombycilla_garrulus__bohemian_waxwing__HLbomGar1__GCA_013400315.1 Bombycilla garrulus bohemian waxwing Bombycilla garrula,Ampelis garrulus 125297 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Bombycillidae; Bombycilla HLbomGar1 GCA_013400315.1 NCBI ASM1340031v1 Scaffold 2020-07-10 B10K Consortium 64047 615058 -1 -1 -1 Phainopepla_nitens__Northern_phainopepla__HLphaNit1__GCA_013400175.1 Phainopepla nitens Northern phainopepla 161653 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Bombycillidae; Phainopepla HLphaNit1 GCA_013400175.1 NCBI ASM1340017v1 Scaffold 2020-07-10 B10K Consortium 74322 542914 -1 -1 -1 Cardinalis_cardinalis__northern_cardinal__HLcarCar1__GCA_014549065.1 Cardinalis cardinalis northern cardinal 98964 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cardinalidae; Cardinalis HLcarCar1 GCA_014549065.1 NCBI CCar_1.0 Scaffold 2020-09-15 Harvard University 133919 3635514 -1 -1 -1 Passerina_amoena__Lazuli_bunting__HLpasAmo1__GCA_013401095.1 Passerina amoena Lazuli bunting 142471 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cardinalidae; Passerina HLpasAmo1 GCA_013401095.1 NCBI ASM1340109v1 Scaffold 2020-07-10 B10K Consortium 54910 646716 -1 -1 -1 Pheucticus_ludovicianus__Rose-breasted_grosbeak__HLpheLudo1__GCA_051175815.1 Pheucticus ludovicianus Rose-breasted grosbeak Loxia ludoviciana 135444 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cardinalidae; Pheucticus HLpheLudo1 GCA_051175815.1 NCBI bPheLud1_p1.1 Scaffold 2025-07-02 Canada's national platform for genome sequencing and analysis 14486001 14486001 NULL NULL NULL Pheucticus_melanocephalus__Black_headed_grosbeak__HLpheMel1__GCA_013398405.1 Pheucticus melanocephalus Black headed grosbeak 371919 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cardinalidae; Pheucticus HLpheMel1 GCA_013398405.1 NCBI ASM1339840v1 Scaffold 2020-07-10 B10K Consortium 57804 697372 -1 -1 -1 Certhia_americana__Brown_creeper__HLcerAme1__GCA_018697195.1 Certhia americana Brown creeper 186443 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Certhiidae; Certhiinae; Certhia HLcerAme1 GCA_018697195.1 NCBI ASM1869719v1 Chromosome 2021-06-03 Texas Tech University 143071 64356598 -1 -1 -1 Certhia_brachydactyla__short-toed_tree-creeper__HLcerBra1__GCA_013400355.1 Certhia brachydactyla short-toed tree-creeper 73330 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Certhiidae; Certhiinae; Certhia HLcerBra1 GCA_013400355.1 NCBI ASM1340035v1 Scaffold 2020-07-10 B10K Consortium 76317 865393 -1 -1 -1 Certhia_familiaris__Eurasian_tree-creeper__HLcerFam1__GCA_013398575.1 Certhia familiaris Eurasian tree-creeper 73333 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Certhiidae; Certhiinae; Certhia HLcerFam1 GCA_013398575.1 NCBI ASM1339857v1 Scaffold 2020-07-10 B10K Consortium 48850 857734 -1 -1 -1 Polioptila_caerulea__Blue_gray_gnatcatcher__HLpolCae1__GCA_013397295.1 Polioptila caerulea Blue gray gnatcatcher 66707 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Certhiidae; Polioptilinae; Polioptila HLpolCae1 GCA_013397295.1 NCBI ASM1339729v1 Scaffold 2020-07-10 B10K Consortium 50944 602916 -1 -1 -1 Thryothorus_ludovicianus__Carolina_wren__HLthrLud1__GCA_013397245.1 Thryothorus ludovicianus Carolina wren 74200 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Certhiidae; Troglodytinae; Thryothorus HLthrLud1 GCA_013397245.1 NCBI ASM1339724v1 Scaffold 2020-07-10 B10K Consortium 60402 495202 -1 -1 -1 Troglodytes_aedon__House_wren__HLtroAedo1A__GCA_057917895.1 Troglodytes aedon House wren 58211 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Certhiidae; Troglodytinae; Troglodytes HLtroAedo1A GCA_057917895.1 NCBI bTroAed1.hap1 Chromosome 2026-06-01 Vertebrate Genomes Project 18857630 72911710 NULL NULL NULL Cinclus_cinclus__White-throated_dipper__HLcinCin1__GCF_963662255.1 Cinclus cinclus White-throated dipper Sturnus cinclus 127875 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cinclidae; Cinclus HLcinCin1 GCF_963662255.1 NCBI bCinCin1.1 Chromosome 2023-12-11 WELLCOME SANGER INSTITUTE 3563180 74357285 -1 -1 -1 Cinclus_mexicanus__American_dipper__HLcinMex1__GCA_013399935.1 Cinclus mexicanus American dipper 161649 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cinclidae; Cinclus HLcinMex1 GCA_013399935.1 NCBI ASM1339993v1 Scaffold 2020-07-10 B10K Consortium 44268 213297 -1 -1 -1 Climacteris_rufus__rufous_treecreeper__HLcliRuf1__GCA_013398175.1 Climacteris rufus rufous treecreeper Climacteris rufa 47695 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Climacteridae; Climacteris HLcliRuf1 GCA_013398175.1 NCBI ASM1339817v1 Scaffold 2020-07-10 B10K Consortium 72434 863000 -1 -1 -1 Callaeas_wilsoni__North_Island_kokako__HLcalWil1__GCA_013398955.1 Callaeas wilsoni North Island kokako Glaucopis wilsoni,Callaeas cinereus wilsoni,Callaeas cinerea wilsoni,Callaeus cinerea wilsoni,Glaucopis cinerea wilsoni 1347786 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Callaeidae; Callaeas HLcalWil1 GCA_013398955.1 NCBI ASM1339895v1 Scaffold 2020-07-10 B10K Consortium 118426 133026 -1 -1 -1 Edolisoma_coerulescens__Black_faced_cuckooshrike__HLedoCoe1__GCA_013397115.1 Edolisoma coerulescens Black faced cuckooshrike Ceblepyris coerulescens Blyth, 1842 2585810 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Campephagidae; Edolisoma HLedoCoe1 GCA_013397115.1 NCBI ASM1339711v1 Scaffold 2020-07-10 B10K Consortium 131175 1336768 -1 -1 -1 Ifrita_kowaldi__blue-capped_ifrita__HLifrKow1__GCA_013398055.1 Ifrita kowaldi blue-capped ifrita 461245 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Cinclosomatidae; Ifrita HLifrKow1 GCA_013398055.1 NCBI ASM1339805v1 Scaffold 2020-07-10 B10K Consortium 103033 424487 -1 -1 -1 Ptilorrhoa_leucosticta__Spotted_jewel_babbler__HLptiLeu1__GCA_013396485.1 Ptilorrhoa leucosticta Spotted jewel babbler 449384 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Cinclosomatidae; Ptilorrhoa HLptiLeu1 GCA_013396485.1 NCBI ASM1339648v1 Scaffold 2020-07-10 B10K Consortium 77643 1205068 -1 -1 -1 Struthidea_cinerea__Apostlebird__HLstrCin1__GCA_013397865.1 Struthidea cinerea Apostlebird 181839 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corcoracidae; Struthidea HLstrCin1 GCA_013397865.1 NCBI ASM1339786v1 Scaffold 2020-07-10 B10K Consortium 74270 1098961 -1 -1 -1 Aphelocoma_californica__Western_scrub-jay__HLaphCali1A__GCA_028536675.1 Aphelocoma californica Western scrub-jay Aphelocoma coerulescens californica,California scrub jay,Garrulus californicus 142466 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Aphelocoma HLaphCali1A GCA_028536675.1 NCBI bAphCal1.0.hap1 Scaffold 2023-02-07 UCLA 11534525 66144195 NULL NULL NULL Aphelocoma_coerulescens__scrub_jay__HLaphCoe1__GCA_013398375.1 Aphelocoma coerulescens scrub jay 39617 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Aphelocoma HLaphCoe1 GCA_013398375.1 NCBI ASM1339837v1 Scaffold 2020-07-10 B10K Consortium 133617 7634200 -1 -1 -1 Aphelocoma_insularis__Santa_Cruz_jay__HLaphInsu1__GCA_048182245.1 Aphelocoma insularis Santa Cruz jay 247969 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Aphelocoma HLaphInsu1 GCA_048182245.1 NCBI A.insularis_AI_1363_74537_pri_1.0 Contig 2025-02-27 Harvard University 24220667 24220667 NULL NULL NULL Aphelocoma_woodhouseii__Woodhouses_scrub-Jay__HLaphWood1__GCA_048174545.1 Aphelocoma woodhouseii Woodhouses scrub-Jay Aphelocoma californica woodhousei,Aphelocoma woodhousei,Aphelocoma californica woodhouseii,Cyanocitta woodhouseii 247972 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Aphelocoma HLaphWood1 GCA_048174545.1 NCBI A.woodhouseii_AW_365326_pri_1.0 Contig 2025-02-27 Harvard University 23231059 23231059 NULL NULL NULL Cnemophilus_loriae__Lorias_bird-of-paradise__HLcneLor1__GCA_013397755.1 Cnemophilus loriae Lorias bird-of-paradise 254448 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Cnemophilus HLcneLor1 GCA_013397755.1 NCBI ASM1339775v1 Scaffold 2020-07-10 B10K Consortium 122939 1426893 -1 -1 -1 Coloeus_monedula__jackdaw__HLcolMon1__GCA_013407035.1 Coloeus monedula jackdaw Coleus monedula,Corvus monedula,Dohle 30423 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Coloeus HLcolMon1 GCA_013407035.1 NCBI ASM1340703v1 Chromosome 2020-07-13 Univerisity of Munich 23262489 73777161 -1 -1 -1 Coloeus_monedula__Jackdaw__HLcolMone2A__GCA_965178545.1 Coloeus monedula Jackdaw Corvus monedula (Linnaeus,Dohle, 1758),Corvus monedula 30423 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Coloeus HLcolMone2A GCA_965178545.1 NCBI bColMon1.hap1.1 Chromosome 2025-03-04 WELLCOME SANGER INSTITUTE 3289653 75391489 NULL NULL NULL Corvus_hawaiiensis__hawaiian_crow__HLcorHaw3__GCF_020740725.1 Corvus hawaiiensis hawaiian crow 134902 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus HLcorHaw3 GCF_020740725.1 NCBI bCorHaw1.pri.cur Chromosome 2021-11-04 Vertebrate Genomes Project 23064755 76278832 -1 -1 -1 Corvus_kubaryi__Mariana_crow__HLcorKub1__GCF_017639235.1 Corvus kubaryi Mariana crow 68294 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus HLcorKub1 GCF_017639235.1 NCBI C.kubaryi_AGA036_p1.0 Scaffold 2021-03-30 United States Geological Survey 211131 17891236 -1 -1 -1 Corvus_macrorhynchos__Large-billed_crow__HLcorMac1__GCA_014363025.1 Corvus macrorhynchos Large-billed crow jungle crow,Corvus macrorhynchus 36249 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus HLcorMac1 GCA_014363025.1 NCBI C_macrorhynchos_scaffold_01 Scaffold 2020-08-22 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 52265 133802 -1 -1 -1 Corvus_moneduloides__New_Caledonian_crow__HLcorMon1__GCA_009650955.1 Corvus moneduloides New Caledonian crow 1196302 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus HLcorMon1 GCA_009650955.1 NCBI bCorMon1.pri Chromosome 2019-11-14 Vertebrate Genomes Project 11524098 74699841 -1 -1 -1 Corvus_brachyrhynchos__American_crow__corBra1__GCF_000691975.1 Corvus brachyrhynchos American crow 85066 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus corBra1 GCF_000691975.1 NCBI ASM69197v1 Scaffold 2014-06-02 BGI 29093 6953989 -1 -1 -1 Corvus_cornix_cornix__hooded_crow__HLcorCor2__GCA_002023255.2 Corvus cornix cornix hooded crow hoodiecrow,Nebelkraehe,Corvus corone cornix 932674 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus; Corvus cornix HLcorCor2 GCA_002023255.2 NCBI ASM202325v2 Scaffold 2017-04-25 Uppsala University, Evolutionary Biology Centre 8911460 18368925 -1 -1 -1 Corvus_cornix_cornix__hooded_crow__HLcorCor3__GCA_000738735.2 Corvus cornix cornix hooded crow hoodiecrow,Nebelkraehe,Corvus corone cornix 932674 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus; Corvus cornix HLcorCor3 GCA_000738735.2 NCBI ASM73873v2 Scaffold 2017-03-08 Uppsala University 97330 21080102 -1 -1 -1 Corvus_cornix_cornix__hooded_crow__HLcorCorCor4__GCA_000738735.4 Corvus cornix cornix hooded crow Nebelkraehe,hoodiecrow,Corvus corone cornix 932674 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus; Corvus cornix HLcorCorCor4 GCA_000738735.4 NCBI ASM73873v4 Chromosome 2020-04-01 Uppsala University 7830412 74117537 -1 -1 -1 Cyanocitta_cristata__Blue_jay__HLcyaCris1A__GCA_046129655.1 Cyanocitta cristata Blue jay Corvus cristatus 28727 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Cyanocitta HLcyaCris1A GCA_046129655.1 NCBI bCyaCrs1.hap1 Chromosome 2024-12-18 Vertebrate Genomes Project 6932545 76484566 NULL NULL NULL Cyanocitta_stelleri__Stellers_jay__HLcyaStel1__GCA_026167965.1 Cyanocitta stelleri Stellers jay Corvus stelleri 114083 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Cyanocitta HLcyaStel1 GCA_026167965.1 NCBI bCyaSte1.0.p Scaffold 2022-11-14 UCLA 7854909 25842608 NULL NULL NULL Cyanocorax_yucatanicus__Yucatan_jay__HLcyaYuca1__GCA_048174265.1 Cyanocorax yucatanicus Yucatan jay Cyanocitta yucatanica 402026 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Cyanocorax HLcyaYuca1 GCA_048174265.1 NCBI C.yucatanicus_CY_8788_pri_1.0 Contig 2025-02-27 Harvard University 13535775 13535775 NULL NULL NULL Oriolus_oriolus__Eurasian_golden-oriole__HLoriOri1__GCA_013400235.1 Oriolus oriolus Eurasian golden-oriole Eurasian golden oriole,pirol,Oriolus oriolus oriolus 181099 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Oriolus HLoriOri1 GCA_013400235.1 NCBI ASM1340023v1 Scaffold 2020-07-10 B10K Consortium 97892 716337 -1 -1 -1 Dicrurus_megarhynchus__Paradise_drongo__HLdicMeg1__GCA_013399195.1 Dicrurus megarhynchus Paradise drongo 450177 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Dicruridae; Dicrurus HLdicMeg1 GCA_013399195.1 NCBI ASM1339919v1 Scaffold 2020-07-10 B10K Consortium 143784 1068420 -1 -1 -1 Erythrocercus_mccallii__Chestnut_capped_flycatcher__HLeryMcc1__GCA_013397435.1 Erythrocercus mccallii Chestnut capped flycatcher 107208 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Dicruridae; Erythrocercus HLeryMcc1 GCA_013397435.1 NCBI ASM1339743v1 Scaffold 2020-07-10 B10K Consortium 83996 346475 -1 -1 -1 Machaerirhynchus_nigripectus__Black_breasted_boatbill__HLmacNig1__GCA_013397975.1 Machaerirhynchus nigripectus Black breasted boatbill Macheirhynchus nigripectus 1160894 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Dicruridae; Machaerirhynchus HLmacNig1 GCA_013397975.1 NCBI ASM1339797v1 Scaffold 2020-07-10 B10K Consortium 76530 998129 -1 -1 -1 Chloropsis_hardwickii__Orange_bellied_leafbird__HLchlHar1__GCA_013390065.1 Chloropsis hardwickii Orange bellied leafbird Chloropsis hardwickei 667144 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Irenidae; Chloropsis HLchlHar1 GCA_013390065.1 NCBI ASM1339006v1 Scaffold 2020-07-06 B10K Consortium 39381 572698 -1 -1 -1 Irena_cyanogastra__fairy_bluebird__HLireCya1__GCA_013397155.1 Irena cyanogastra fairy bluebird Irena cyanogaster 175120 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Irenidae; Irena HLireCya1 GCA_013397155.1 NCBI ASM1339715v1 Scaffold 2020-07-10 B10K Consortium 128716 552862 -1 -1 -1 Lanius_collurio__red-backed_shrike__HLlanCol1__GCA_020086605.1 Lanius collurio red-backed shrike 56324 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Laniidae; Lanius HLlanCol1 GCA_020086605.1 NCBI ASM2008660v1 Scaffold 2021-09-21 BGI 143569 23147665 -1 -1 -1 Lanius_ludovicianus__Loggerhead_shrike__HLlanLud1__GCA_013397235.1 Lanius ludovicianus Loggerhead shrike 28713 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Laniidae; Lanius HLlanLud1 GCA_013397235.1 NCBI ASM1339723v1 Scaffold 2020-07-10 B10K Consortium 98065 684974 -1 -1 -1 Lanius_phoenicuroides__Red-tailed_shrike__HLlanPhoe1__GCA_045788165.1 Lanius phoenicuroides Red-tailed shrike Lanius isabellinus phoenicuroides,Otomela phoenicuroides 3150054 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Laniidae; Lanius HLlanPhoe1 GCA_045788165.1 NCBI ASM4578816v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 193607 13976961 NULL NULL NULL Lanius_cristatus__Brown_shrike__HLlanCris1__GCA_982555685.1 Lanius cristatus Brown shrike 337178 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Laniidae; Lanius HLlanCris1 GCA_982555685.1 NCBI B10K-DU-013-48 Scaffold 2026-04-29 Center for Evolutionary Hologenomics, University of Copenhagen 163295 13786630 NULL NULL NULL Monarcha_castaneiventris_obscurior__Makira_monarch__HLmonCastObs1__GCA_026261815.1 Monarcha castaneiventris obscurior Makira monarch 1780129 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Monarchidae; Monarcha; Monarcha castaneiventris HLmonCastObs1 GCA_026261815.1 NCBI Monaracha_assembly_V1 Scaffold 2022-11-21 Cornell University 18573903 20161131 NULL NULL NULL Myiagra_hebetior__Mussau_flycatcher__HLmyiHeb1__GCA_013397015.1 Myiagra hebetior Mussau flycatcher 381031 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Monarchidae; Myiagra HLmyiHeb1 GCA_013397015.1 NCBI ASM1339701v1 Scaffold 2020-07-10 B10K Consortium 66181 831089 -1 -1 -1 Orthonyx_spaldingii__northern_chowchilla__HLortSpa1__GCA_013397795.1 Orthonyx spaldingii northern chowchilla Spalding's logrunner 38397 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Orthonychidae; Orthonyx HLortSpa1 GCA_013397795.1 NCBI ASM1339779v1 Scaffold 2020-07-10 B10K Consortium 81405 1302835 -1 -1 -1 Aleadryas_rufinucha__rufous-naped_whistler__HLaleRuf1__GCA_013397815.1 Aleadryas rufinucha rufous-naped whistler Pachycephala rufinucha 461220 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Pachycephalidae; Aleadryas HLaleRuf1 GCA_013397815.1 NCBI ASM1339781v1 Scaffold 2020-07-10 B10K Consortium 90297 367770 -1 -1 -1 Daphoenositta_chrysoptera__varied_sittella__HLdapChr1__GCA_013397915.1 Daphoenositta chrysoptera varied sittella 254528 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Pachycephalidae; Daphoenositta HLdapChr1 GCA_013397915.1 NCBI ASM1339791v1 Scaffold 2020-07-10 B10K Consortium 79485 804295 -1 -1 -1 Eulacestoma_nigropectus__wattled_ploughbill__HLeulNig1__GCA_013397775.1 Eulacestoma nigropectus wattled ploughbill Eulacestoma nigripectus 461239 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Pachycephalidae; Eulacestoma HLeulNig1 GCA_013397775.1 NCBI ASM1339777v1 Scaffold 2020-07-10 B10K Consortium 75916 1156832 -1 -1 -1 Falcunculus_frontatus__Eastern_shriketit__HLfalFro1__GCA_013398115.1 Falcunculus frontatus Eastern shriketit Eastern shrike-tit,crested shrike-tit 254539 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Pachycephalidae; Falcunculus HLfalFro1 GCA_013398115.1 NCBI ASM1339811v1 Scaffold 2020-07-10 B10K Consortium 150458 1193676 -1 -1 -1 Pachycephala_philippinensis__yellow-belllied_whistler__HLpacPhi1__GCA_013397055.1 Pachycephala philippinensis yellow-belllied whistler 449367 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Pachycephalidae; Pachycephala HLpacPhi1 GCA_013397055.1 NCBI ASM1339705v1 Scaffold 2020-07-10 B10K Consortium 60658 492780 -1 -1 -1 Rhagologus_leucostigma__Mottled_berryhunter__HLrhaLeu1__GCA_013397725.1 Rhagologus leucostigma Mottled berryhunter 156170 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Pachycephalidae; Rhagologus HLrhaLeu1 GCA_013397725.1 NCBI ASM1339772v1 Scaffold 2020-07-10 B10K Consortium 141346 1441581 -1 -1 -1 Cicinnurus_regius__king_bird_of_paradise__HLcicReg1__GCA_003713305.1 Cicinnurus regius king bird of paradise 36263 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Paradisaeidae; Cicinnurus HLcicReg1 GCA_003713305.1 NCBI CicReg_1.0 Scaffold 2018-11-06 University of Vienna 465502 3187586 -1 -1 -1 Diphyllodes_magnificus__Magnificent_bird_of_paradise__HLdipMag1__GCA_003713285.1 Diphyllodes magnificus Magnificent bird of paradise Cicinnurus magnificus,Diphyllodes (Cicinnurus) magnificus 28716 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Paradisaeidae; Diphyllodes HLdipMag1 GCA_003713285.1 NCBI DipMag_1.0 Scaffold 2018-11-06 University of Vienna 241639 6488714 -1 -1 -1 Lycocorax_pyrrhopterus_obiensis__Obi_paradise_crow__HLlycPyrObi2__GCA_014706295.1 Lycocorax pyrrhopterus obiensis Obi paradise crow Lycocorax obiensis 2767082 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Paradisaeidae; Lycocorax; Lycocorax pyrrhopterus HLlycPyrObi2 GCA_014706295.1 NCBI ASM1470629v1 Scaffold 2020-09-23 Uppsala University 7380351 74168823 -1 -1 -1 Paradisaea_raggiana__Raggiana_bird_of_paradise__HLparRag1__GCA_003713265.1 Paradisaea raggiana Raggiana bird of paradise 36268 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Paradisaeidae; Paradisaea HLparRag1 GCA_003713265.1 NCBI ParRag_1.0 Scaffold 2018-11-06 University of Vienna 96622 882045 -1 -1 -1 Paradisaea_rubra__red_bird_of_paradise__HLparRub1__GCA_003713215.1 Paradisaea rubra red bird of paradise 39963 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Paradisaeidae; Paradisaea HLparRub1 GCA_003713215.1 NCBI ParRub_1.0 Scaffold 2018-11-06 University of Vienna 415330 3264865 -1 -1 -1 Parotia_lawesii__Lawess_parotia__HLparLaw1__GCA_003713295.1 Parotia lawesii Lawess parotia 39961 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Paradisaeidae; Parotia HLparLaw1 GCA_003713295.1 NCBI ParLaw_1.0 Scaffold 2018-11-06 University of Vienna 432029 3066654 -1 -1 -1 Dyaphorophyia_castanea__Chestnut_wattle_eye__HLdyaCas1__GCA_013397175.1 Dyaphorophyia castanea Chestnut wattle eye Platysteira castanea 1160851 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Platysteiridae; Platysteira HLdyaCas1 GCA_013397175.1 NCBI ASM1339717v1 Scaffold 2020-07-10 B10K Consortium 84600 719154 -1 -1 -1 Vireo_altiloquus__black-whiskered_vireo__HLvirAlt1__GCA_013396875.1 Vireo altiloquus black-whiskered vireo 34956 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Vireonidae; Vireoninae; Vireo HLvirAlt1 GCA_013396875.1 NCBI ASM1339687v1 Scaffold 2020-07-10 B10K Consortium 121572 668056 -1 -1 -1 Cephalopterus_ornatus__amazonian_umbrellabird__HLcepOrn1__GCA_013396775.1 Cephalopterus ornatus amazonian umbrellabird 114276 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cotingidae; Cephalopterus HLcepOrn1 GCA_013396775.1 NCBI ASM1339677v1 Scaffold 2020-07-10 B10K Consortium 75604 292884 -1 -1 -1 Oxyruncus_cristatus__sharpbill__HLoxyCri1__GCA_013399855.1 Oxyruncus cristatus sharpbill Oxyruncus cristata 114331 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cotingidae; Oxyruncus HLoxyCri1 GCA_013399855.1 NCBI ASM1339985v1 Scaffold 2020-07-10 B10K Consortium 75750 1139285 -1 -1 -1 Campylorhamphus_procurvoides__Curve_billed_scythebill__HLcamPro1__GCA_013396655.1 Campylorhamphus procurvoides Curve billed scythebill 190295 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Dendrocolaptidae; Campylorhamphus HLcamPro1 GCA_013396655.1 NCBI ASM1339665v1 Scaffold 2020-07-10 B10K Consortium 152160 1025016 -1 -1 -1 Dendrocincla_fuliginosa__Plain-brown_woodcreeper__HLdenFuli1__GCA_035047845.1 Dendrocincla fuliginosa Plain-brown woodcreeper Dendrocopus fuliginosus 183179 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Dendrocolaptidae; Dendrocincla HLdenFuli1 GCA_035047845.1 NCBI ASM3504784v1 Scaffold 2024-01-03 Iridian Genomes 37189 70894503 NULL NULL NULL Xiphorhynchus_elegans__elegant_woodcreeper__HLxipEle1__GCA_013401175.1 Xiphorhynchus elegans elegant woodcreeper Dendrornis elegans,Xiphorhynchus spixii elegans 269412 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Dendrocolaptidae; Xiphorhynchus HLxipEle1 GCA_013401175.1 NCBI ASM1340117v1 Scaffold 2020-07-10 B10K Consortium 62223 172271 -1 -1 -1 Spelaeornis_formosus__spotted_wren-babbler__HLspeFor1__GCA_013398795.1 Spelaeornis formosus spotted wren-babbler Elachura formosus,Elachura formosa 1463973 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Elachuridae; Elachura HLspeFor1 GCA_013398795.1 NCBI ASM1339879v1 Scaffold 2020-07-10 B10K Consortium 43159 1152566 -1 -1 -1 Calyptomena_viridis__green_broadbill__HLcalVir1__GCA_013390005.1 Calyptomena viridis green broadbill 135972 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Eurylaimidae; Calyptomena HLcalVir1 GCA_013390005.1 NCBI ASM1339000v1 Scaffold 2020-07-06 B10K Consortium 40187 169242 -1 -1 -1 Serilophus_lunatus__silver-breasted_broadbill__HLserLun1__GCA_013399895.1 Serilophus lunatus silver-breasted broadbill 239386 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Eurylaimidae; Serilophus HLserLun1 GCA_013399895.1 NCBI ASM1339989v1 Scaffold 2020-07-10 B10K Consortium 89885 848514 -1 -1 -1 Smithornis_capensis__African_broadbill__HLsmiCap1__GCA_013396465.1 Smithornis capensis African broadbill 363769 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Eurylaimidae; Smithornis HLsmiCap1 GCA_013396465.1 NCBI ASM1339646v1 Scaffold 2020-07-10 B10K Consortium 67220 1785105 -1 -1 -1 Formicarius_rufipectus__Rufous_breasted_antthrush__HLforRuf1__GCA_013399695.1 Formicarius rufipectus Rufous breasted antthrush 1118560 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Formicariidae; Formicarius HLforRuf1 GCA_013399695.1 NCBI ASM1339969v1 Scaffold 2020-07-10 B10K Consortium 79409 836584 -1 -1 -1 Grallaria_varia__variegated_antpitta__HLgraVar1__GCA_013396735.1 Grallaria varia variegated antpitta 117165 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Formicariidae; Grallaria HLgraVar1 GCA_013396735.1 NCBI ASM1339673v1 Scaffold 2020-07-10 B10K Consortium 64146 482390 -1 -1 -1 Furnarius_figulus__Wing_banded_hornero__HLfurFig1__GCA_013397465.1 Furnarius figulus Wing banded hornero 463165 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Furnariidae; Furnarius HLfurFig1 GCA_013397465.1 NCBI ASM1339746v1 Scaffold 2020-07-10 B10K Consortium 55547 650940 -1 -1 -1 Furnarius_rufus__Rufous_hornero__HLfurRuf1__GCA_041053205.1 Furnarius rufus Rufous hornero 81886 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Furnariidae; Furnarius HLfurRuf1 GCA_041053205.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2020-03-12 90354 12397575 -1 -1 -1 Sclerurus_mexicanus__tawny-throated_leaftosser__HLsclMex1__GCA_013396755.1 Sclerurus mexicanus tawny-throated leaftosser 265632 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Furnariidae; Sclerurus HLsclMex1 GCA_013396755.1 NCBI ASM1339675v1 Scaffold 2020-07-10 B10K Consortium 128486 1030170 -1 -1 -1 Acanthiza_pusilla__brown_thornbill__HLacaPus1__GCA_041053275.1 Acanthiza pusilla brown thornbill 117193 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Acanthizidae; Acanthiza HLacaPus1 GCA_041053275.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2019-07-20 105781 2883131 -1 -1 -1 Acanthornis_magna__Scrubtit__HLacaMagn1__GCA_036785705.1 Acanthornis magna Scrubtit Acanthiza magna 720576 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Acanthizidae; Acanthornis HLacaMagn1 GCA_036785705.1 NCBI bAcamag1.pri.20230524.fasta Contig 2024-02-22 The University of Sydney 7715064 7715064 NULL NULL NULL Mohoua_ochrocephala__Yellowhead__HLmohOch1__GCA_013398855.1 Mohoua ochrocephala Yellowhead 874463 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Acanthizidae; Mohoua HLmohOch1 GCA_013398855.1 NCBI ASM1339885v1 Scaffold 2020-07-10 B10K Consortium 54215 206785 -1 -1 -1 Origma_solitaria__Rockwarbler__HLoriSol1__GCA_013397895.1 Origma solitaria Rockwarbler 720586 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Acanthizidae; Origma HLoriSol1 GCA_013397895.1 NCBI ASM1339789v1 Scaffold 2020-07-10 B10K Consortium 99117 1255867 -1 -1 -1 Smicrornis_brevirostris__Weebill__HLsmiBrev1__GCA_056825575.1 Smicrornis brevirostris Weebill Psilopus brevirostris 117206 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Acanthizidae; Smicrornis HLsmiBrev1 GCA_056825575.1 NCBI B10K-D-AMNH-43 Scaffold 2026-04-21 Bird 10,000 Genomes (B10K) consortium 96825 8027660 NULL NULL NULL Dasyornis_broadbenti__rufous_bristle-bird__HLdasBro1__GCA_013397935.1 Dasyornis broadbenti rufous bristle-bird 243059 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Dasyornithidae; Dasyornis HLdasBro1 GCA_013397935.1 NCBI ASM1339793v1 Scaffold 2020-07-10 B10K Consortium 67799 1415013 -1 -1 -1 Malurus_elegans__Red-winged_fairywren__HLmalEle1__GCA_013397995.1 Malurus elegans Red-winged fairywren Amytornis elegans 720584 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Maluridae; Malurus HLmalEle1 GCA_013397995.1 NCBI ASM1339799v1 Scaffold 2020-07-10 B10K Consortium 74070 458136 -1 -1 -1 Malurus_cyaneus_samueli__Superb_fairywren__HLmalCya1__GCA_009741485.1 Malurus cyaneus samueli Superb fairywren Amytornis cyaneus,Motacilla cyanea 2593467 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Maluridae; Malurus; Malurus cyaneus HLmalCya1 GCA_009741485.1 NCBI mCya_1.0 Chromosome 2019-12-12 Australian National University 210412 68113514 -1 -1 -1 Entomyzon_cyanotis__Blue_faced_honeyeater__HLentCya1__GCA_020137895.1 Entomyzon cyanotis Blue faced honeyeater Gracula cyanotis 266349 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Entomyzon HLentCya1 GCA_020137895.1 NCBI ASM2013789v1 Scaffold 2021-09-24 Harvard University 202860 4504408 -1 -1 -1 Entomyzon_cyanotis__Blue_faced_honeyeater__HLentCya2__GCA_024500445.1 Entomyzon cyanotis Blue faced honeyeater Gracula cyanotis 266349 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Entomyzon HLentCya2 GCA_024500445.1 NCBI MCZ_Ecyan_1.0 Contig 2022-08-01 Harvard University 27441776 27441776 -1 -1 -1 Grantiella_picta__Painted_honeyeater__HLgraPic1__GCA_013397955.1 Grantiella picta Painted honeyeater 266360 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Grantiella HLgraPic1 GCA_013397955.1 NCBI ASM1339795v1 Scaffold 2020-07-10 B10K Consortium 100624 1131194 -1 -1 -1 Lichenostomus_cassidix__helmeted_honeyeater__HLlicMelCas1 Lichenostomus cassidix helmeted honeyeater Meliphaga cassidix,Meliphaga melanops cassidix,Lichenostomus melanops cassidix,Ptilotis cassidix 1497555 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Lichenostomus HLlicMelCas1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-30 6736108 63800663 -1 -1 -1 Melidectes_torquatus__Ornate_melidectes__HLmelTorq1__GCA_965196965.1 Melidectes torquatus Ornate melidectes 266318 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Melidectes HLmelTorq1 GCA_965196965.1 NCBI bMelToq Scaffold 2025-03-09 Swedish Museum of Natural History 13580513 71328442 NULL NULL NULL Myzomela_cardinalis__Cardinal_Myzomela__HLmyzCard1__GCA_051294465.1 Myzomela cardinalis Cardinal Myzomela Certhia cardinalis 265620 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Myzomela HLmyzCard1 GCA_051294465.1 NCBI MyzoCard1.0.pri Chromosome 2025-07-10 University of Rochester 19065458 72951082 NULL NULL NULL Myzomela_tristrami__Sooty_myzomela__HLmyzTris1__GCA_051294455.1 Myzomela tristrami Sooty myzomela 1786045 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Myzomela HLmyzTris1 GCA_051294455.1 NCBI MyzoTris1.0.pri Chromosome 2025-07-10 University of Rochester 29690660 74714370 NULL NULL NULL Phylidonyris_novaehollandiae__New_Holland_honeyeater__HLphyNov1__GCA_041053245.1 Phylidonyris novaehollandiae New Holland honeyeater 266418 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Phylidonyris HLphyNov1 GCA_041053245.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2019-07-20 155058 3147863 -1 -1 -1 Ptilotula_penicillata__White-plumed_honeyeater__HLlicPen1__GCA_046563585.1 Ptilotula penicillata White-plumed honeyeater Meliphaga penicillata,Lichenostomus penicillatus 481899 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Ptilotula HLlicPen1 GCA_046563585.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2020-12-21 16687468 71898266 -1 -1 -1 Ramsayornis_fasciatus__Bar-breasted_honeyeater__HLramFasc1__GCA_056825045.1 Ramsayornis fasciatus Bar-breasted honeyeater Glyciphila fasciata 266379 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Meliphagidae; Ramsayornis HLramFasc1 GCA_056825045.1 NCBI B10K-D-AMNH-44 Scaffold 2026-04-21 Bird 10,000 Genomes (B10K) consortium 101501 7804485 NULL NULL NULL Pardalotus_punctatus__spotted_pardalote__HLparPun1__GCA_013400915.1 Pardalotus punctatus spotted pardalote 254575 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Pardalotidae; Pardalotus HLparPun1 GCA_013400915.1 NCBI ASM1340091v1 Scaffold 2020-07-10 B10K Consortium 83169 306807 -1 -1 -1 Atrichornis_clamosus__Noisy_scrubbird__HLatrCla1__GCA_013400975.1 Atrichornis clamosus Noisy scrubbird 449594 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Menuridae; Atrichornis HLatrCla1 GCA_013400975.1 NCBI ASM1340097v1 Scaffold 2020-07-10 B10K Consortium 125279 147592 -1 -1 -1 Menura_novaehollandiae__superb_lyrebird__HLmenNov1__GCA_013396355.1 Menura novaehollandiae superb lyrebird Menura superba,Menura novahollandiae 47692 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Menuridae; Menura HLmenNov1 GCA_013396355.1 NCBI ASM1339635v1 Scaffold 2020-07-10 B10K Consortium 85461 2360993 -1 -1 -1 Donacobius_atricapilla__Black_capped_donacobius__HLdonAtr1__GCA_013397315.1 Donacobius atricapilla Black capped donacobius Donacobius atricapillus 237420 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Mimidae; Donacobius HLdonAtr1 GCA_013397315.1 NCBI ASM1339731v1 Scaffold 2020-07-10 B10K Consortium 64871 542855 -1 -1 -1 Dumetella_carolinensis__Grey_catbird__HLdumCaro1A__GCA_057427935.1 Dumetella carolinensis Grey catbird Dumatella carolinensis,gray catbird,Galeoscoptes carolinensis,Muscicapa carolinensis 111981 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Mimidae; Dumetella HLdumCaro1A GCA_057427935.1 NCBI bDumCar1.hap1 Chromosome 2026-05-11 Vertebrate Genomes Project 22443345 68734231 NULL NULL NULL Toxostoma_redivivum__California_thrasher__HLtoxRed1__GCA_013397375.1 Toxostoma redivivum California thrasher 99882 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Mimidae; Toxostoma HLtoxRed1 GCA_013397375.1 NCBI ASM1339737v1 Scaffold 2020-07-10 B10K Consortium 88070 747747 -1 -1 -1 Copsychus_sechellarum__Seychelles_magpie_robin__HLcopSec1__GCA_013398635.1 Copsychus sechellarum Seychelles magpie robin 797021 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Copsychus HLcopSec1 GCA_013398635.1 NCBI ASM1339863v1 Scaffold 2020-07-10 B10K Consortium 109076 11085488 -1 -1 -1 Copsychus_sechellarum__Seychelles_magpie-robin__HLcopSech2A__GCA_054084125.1 Copsychus sechellarum Seychelles magpie-robin 797021 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Copsychus HLcopSech2A GCA_054084125.1 NCBI bCopSec1.hap1 Chromosome 2025-12-18 Vertebrate Genomes Project 13305154 68559407 NULL NULL NULL Cossypha_niveicapilla__Snowy-crowned_robin-chat__HLcosNive1__GCA_027576815.1 Cossypha niveicapilla Snowy-crowned robin-chat Turdus niveicapilla 228316 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Cossypha HLcosNive1 GCA_027576815.1 NCBI ASM2757681v1 Scaffold 2023-01-06 Iridian Genomes 9328 58307819 NULL NULL NULL Ficedula_albicilla__Taiga_flycatcher__HLficAlbi1__GCA_045788055.1 Ficedula albicilla Taiga flycatcher Muscicapa albicilla 393706 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula HLficAlbi1 GCA_045788055.1 NCBI ASM4578805v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 138453 8770596 NULL NULL NULL Ficedula_hypoleuca__European_pied_flycatcher__HLficHypo1__GCA_045784345.1 Ficedula hypoleuca European pied flycatcher Motacilla hypoleuca 46689 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula HLficHypo1 GCA_045784345.1 NCBI ASM4578434v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 141933 7111233 NULL NULL NULL Ficedula_albicollis__Collared_flycatcher__ficAlb2__GCF_000247815.1 Ficedula albicollis Collared flycatcher 59894 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula ficAlb2 GCF_000247815.1 NCBI FicAlb1.5 Chromosome 2013-06-27 Uppsala University 410964 6542656 -1 -1 -1 Muscicapa_striata_striata__Spotted_flycatcher__HLmusStriStr1__GCA_030060385.1 Muscicapa striata striata Spotted flycatcher Motacilla striata,Motacilla striata striata 1471808 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Muscicapa; Muscicapa striata HLmusStriStr1 GCA_030060385.1 NCBI ASM3006038v1 Contig 2023-05-22 Museum national d'Histoire naturelle 3249550 3249550 NULL NULL NULL Oenanthe_melanoleuca__eastern_black-eared_wheatear__HLoenMel1__GCF_029582105.1 Oenanthe melanoleuca eastern black-eared wheatear Muscicapa melanoleuca,Oenanthe hispanica melanoleuca 2939378 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe HLoenMel1 GCF_029582105.1 NCBI OMel1.0 Chromosome 2023-04-06 Swiss Ornithological Institute 7795761 69618406 -1 -1 -1 Oenanthe_oenanthe__Northern_wheatear__HLoenOen1__GCA_013399995.1 Oenanthe oenanthe Northern wheatear 279966 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Oenanthe HLoenOen1 GCA_013399995.1 NCBI ASM1339999v1 Scaffold 2020-07-10 B10K Consortium 44998 507914 -1 -1 -1 Phoenicurus_ochruros__Black_redstart__HLphoOchr1__GCA_050234705.1 Phoenicurus ochruros Black redstart Motacilla ochruros 358815 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Phoenicurus HLphoOchr1 GCA_050234705.1 NCBI Blred Contig 2025-05-07 Kent State University 29902800 29902800 NULL NULL NULL Saxicola_rubicola__European_stonechat__HLsaxRubi1__GCA_045785025.1 Saxicola rubicola European stonechat Motacilla rubicola,Saxicola torquata rubicola 230659 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Saxicola HLsaxRubi1 GCA_045785025.1 NCBI ASM4578502v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 139914 13820699 NULL NULL NULL Saxicola_maurus_maurus__Siberian_stonechat__HLsaxMau1__GCA_900205225.1 Saxicola maurus maurus Siberian stonechat Saxicola maura,Saxicola torquata maura 1187130 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Saxicola; Saxicola maurus HLsaxMau1 GCA_900205225.1 NCBI Saxicola_maurus.2 Scaffold 2017-09-28 UNIVERSITY OF OXFORD 96283 10035936 -1 -1 -1 Sholicola_albiventris__White-bellied_shortwing__HLshoAlbi1__GCA_050043525.1 Sholicola albiventris White-bellied shortwing White-bellied blue robin, 1868),Brachypteryx albiventris (Blanford,Callene albiventris,Myiomela albiventris 958669 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Sholicola HLshoAlbi1 GCA_050043525.1 NCBI bShoAlb1.1 Scaffold 2025-04-30 Indian Institute of Science Education and Research Tirupati 26829641 68641415 NULL NULL NULL Cercotrichas_coryphoeus__Karoo_scrub-robin__HLcerCor1__GCA_013398595.1 Cercotrichas coryphoeus Karoo scrub-robin Erythropygia coryphaeus,Erythorpygia coryphaeus,Cercotrichas coryphaeus 614051 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Tychaedon HLcerCor1 GCA_013398595.1 NCBI ASM1339859v1 Scaffold 2020-07-10 B10K Consortium 55393 954946 -1 -1 -1 Notiomystis_cincta__Stitchbird__HLnotCin1__GCA_013398075.1 Notiomystis cincta Stitchbird 366454 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Notiomystidae; Notiomystis HLnotCin1 GCA_013398075.1 NCBI ASM1339807v1 Scaffold 2020-07-10 B10K Consortium 50117 154199 -1 -1 -1 Anthoscopus_minutus__Southern_penduline_tit__HLantMin1__GCA_013399455.1 Anthoscopus minutus Southern penduline tit Sylvia minuta 156561 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Anthoscopus HLantMin1 GCA_013399455.1 NCBI ASM1339945v1 Scaffold 2020-07-10 B10K Consortium 49651 108848 -1 -1 -1 Baeolophus_bicolor__Tufted_titmouse__HLbaeBico1A__GCA_055754725.1 Baeolophus bicolor Tufted titmouse Parus bicolor 88114 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Baeolophus HLbaeBico1A GCA_055754725.1 NCBI bBaeBic1.hap1 Chromosome 2026-03-09 Vertebrate Genomes Project 6803303 74378943 NULL NULL NULL Cyanistes_caeruleus__blue_tit__HLcyaCae1__GCA_002901205.1 Cyanistes caeruleus blue tit Parus caeruleus,Blaumeise 156563 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes HLcyaCae1 GCA_002901205.1 NCBI cyaCae2 Scaffold 2018-01-26 Dr. Bernd Tmmermann, NGS core facility, MPI Molecular Genetics 105778 16846143 -1 -1 -1 Lophophanes_cristatus__Crested_tit__HLlopCris1__GCA_045783515.1 Lophophanes cristatus Crested tit Haubenmeise,Parus cristatus 156565 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Lophophanes HLlopCris1 GCA_045783515.1 NCBI ASM4578351v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 164906 18951753 NULL NULL NULL Parus_major__Great_Tit__HLparMaj1__GCA_001522545.3 Parus major Great Tit Kohlmeise 9157 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus HLparMaj1 GCA_001522545.3 NCBI Parus_major1.1 Chromosome 2019-01-15 Animal Breeding and Genomics Centre, Wageningen University 148693 71365269 -1 -1 -1 Periparus_ater__Coal_Tit__HLperAter1__GCA_032357785.1 Periparus ater Coal Tit Parus ater,Tannenmeise,coal titmouse 156567 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Periparus HLperAter1 GCA_032357785.1 NCBI ASM3235778v1 Chromosome 2023-10-06 Institute of Zoology, Chinese Academy of Sciences 9092038 74403770 NULL NULL NULL Poecile_atricapillus__Black-capped_chickadee__HLpoeAtr1__GCA_011421415.1 Poecile atricapillus Black-capped chickadee Parus atricapillus,Poecile atricapilla 48891 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Poecile HLpoeAtr1 GCA_011421415.1 NCBI CUB_Patr_1.0 Chromosome 2020-03-19 University of Colorado Boulder 109509 64674564 -1 -1 -1 Poecile_atricapillus__Black-capped_chickadee__HLpoeAtri2A__GCF_030490865.1 Poecile atricapillus Black-capped chickadee Parus atricapillus,Poecile atricapilla 48891 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Poecile HLpoeAtri2A GCF_030490865.1 NCBI bPoeAtr1.hap1 Chromosome 2023-07-18 Vertebrate Genomes Project 8462732 107919339 NULL NULL NULL Poecile_montanus__Willow_tit__HLpoeMont1__GCA_038429875.2 Poecile montanus Willow tit Poecile montana,Parus montanus,Parus cinereus montanus 48895 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Poecile HLpoeMont1 GCA_038429875.2 NCBI ASM3842987v2 Chromosome 2025-02-05 LMU Munich 16277000 76173615 NULL NULL NULL Pseudopodoces_humilis__Tibetan_ground-tit__pseHum1__GCF_000331425.1 Pseudopodoces humilis Tibetan ground-tit Podoces humilis,Parus humilis,Tibetan ground-jay,Pseudopoces humilis 181119 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Pseudopodoces pseHum1 GCF_000331425.1 NCBI PseHum1.0 Scaffold 2013-01-11 Beijing Genomics Institute (BGI)-Shenzhen 165265 16337386 -1 -1 -1 Ammodramus_savannarum_pratensis__grasshopper_sparrow__HLammSavPra1__GCA_020466415.1 Ammodramus savannarum pratensis grasshopper sparrow Fringilla savannarum 2860302 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Ammodramus; Ammodramus savannarum HLammSavPra1 GCA_020466415.1 NCBI ASM2046641v1 Scaffold 2021-10-13 University of Florida 68851 68240656 -1 -1 -1 Ammospiza_caudacuta__saltmarsh_sparrow__HLammCau1__GCF_027887145.1 Ammospiza caudacuta saltmarsh sparrow Oriolus caudacutus,Ammodramus caudacutus 2857398 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Ammospiza HLammCau1 GCF_027887145.1 NCBI bAmmCau1.pri Chromosome 2023-01-18 Vertebrate Genomes Project 8252193 78443464 -1 -1 -1 Ammospiza_nelsoni__Nelsons_sparrow__HLammNel1__GCF_027579445.1 Ammospiza nelsoni Nelsons sparrow Ammodromus caudacutus nelsoni 2857394 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Ammospiza HLammNel1 GCF_027579445.1 NCBI bAmmNel1.pri Chromosome 2023-01-09 Vertebrate Genomes Project 12036358 74723840 -1 -1 -1 Ammospiza_maritima_maritima__seaside_sparrow__HLammMariMar1__GCA_036010785.1 Ammospiza maritima maritima seaside sparrow Fringilla maritima maritima,Ammodramus maritimus,Fringilla maritima 3111550 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Ammospiza; Ammospiza maritima HLammMariMar1 GCA_036010785.1 NCBI bAmmMar1.pri Chromosome 2024-01-24 Vertebrate Genomes Project 8735889 67791739 NULL NULL NULL Artemisiospiza_belli__sage_sparrow__HLartBel1__GCA_021963965.1 Artemisiospiza belli sage sparrow Emberiza belli,Amphispiza belli,Bell's sparrow,Bell's finch 198938 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Artemisiospiza HLartBel1 GCA_021963965.1 NCBI bArtBel1.0.p Scaffold 2022-02-04 UCLA 8253817 17082054 -1 -1 -1 Junco_hyemalis__dark-eyed_junco__HLjunHye1__GCA_003829775.1 Junco hyemalis dark-eyed junco 40217 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Junco HLjunHye1 GCA_003829775.1 NCBI ASM382977v1 Scaffold 2018-11-26 National Museum of Natural Sciences 80164 71317294 -1 -1 -1 Melospiza_georgiana__swamp_sparrow__HLmelGeo1__GCF_028018845.1 Melospiza georgiana swamp sparrow Fringilla georgiana 44398 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Melospiza HLmelGeo1 GCF_028018845.1 NCBI bMelGeo1.pri Chromosome 2023-01-31 Vertebrate Genomes Project 10446106 74254230 -1 -1 -1 Melospiza_melodia__song_sparrow__HLmelMel1__GCA_013398205.1 Melospiza melodia song sparrow Melospiza fasciata,Zonotrichia melodia,Melospiza cinerea 44397 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Melospiza HLmelMel1 GCA_013398205.1 NCBI ASM1339820v1 Scaffold 2020-07-10 B10K Consortium 181098 9239070 -1 -1 -1 Melospiza_melodia_melodia__Song_sparrow__HLmelMeloMel2__GCF_035770615.1 Melospiza melodia melodia Song sparrow Zonotrichia melodia,Melospiza cinerea,Melospiza fasciata,Fringilla melodia melodia,Fringilla melodia 1914991 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Melospiza; Melospiza melodia HLmelMeloMel2 GCF_035770615.1 NCBI bMelMel2.pri Chromosome 2024-01-24 Vertebrate Genomes Project 19453098 77460261 NULL NULL NULL Melozone_crissalis__California_towhee__HLmelCri1__GCF_028551555.1 Melozone crissalis California towhee Aimophila crissalis,Kieneria crissalis,Pipilo crissalis,Pipilo fuscus crissalis, 1839),Kieneria crissalis (Vigors 40204 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Melozone HLmelCri1 GCF_028551555.1 NCBI PUWL_Pcris_2 Contig 2023-02-08 Purdue University 22266903 22266903 -1 -1 -1 Passerculus_sandwichensis__Savannah_sparrow__HLpasSand2__GCA_031885435.1 Passerculus sandwichensis Savannah sparrow Ammodramus sandwichensis,Grasammer,Emberiza sandwichensis 161624 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Passerculus HLpasSand2 GCA_031885435.1 NCBI bPasSan2.pri Chromosome 2023-09-25 Vertebrate Genomes Project 19816254 64395891 NULL NULL NULL Passerculus_sandwichensis_alaudinus__Savannah_sparrow__HLpasSanAla1__GCA_022577445.1 Passerculus sandwichensis alaudinus Savannah sparrow Grasammer,Ammodramus sandwichensis 2916761 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Passerculus; Passerculus sandwichensis HLpasSanAla1 GCA_022577445.1 NCBI bPasSan1.0.p Scaffold 2022-03-15 UCLA 5981027 18220233 -1 -1 -1 Spizella_passerina__Chipping_sparrow__HLspiPass1A__GCA_056783625.1 Spizella passerina Chipping sparrow Fringilla passerina 40210 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Spizella HLspiPass1A GCA_056783625.1 NCBI bSpiPas1.hap1 Chromosome 2026-04-16 Vertebrate Genomes Project 5183287 59987740 NULL NULL NULL Zonotrichia_albicollis__White-throated_sparrow__HLzonAlbi2A__GCF_047830755.1 Zonotrichia albicollis White-throated sparrow Fringilla albicollis 44394 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia HLzonAlbi2A GCF_047830755.1 NCBI bZonAlb1.hap1 Chromosome 2025-02-18 Vertebrate Genomes Project 17147933 64429512 NULL NULL NULL Zonotrichia_capensis__Rufous-collared_sparrow__HLzonCape1__GCA_045269165.1 Zonotrichia capensis Rufous-collared sparrow Fringilla capensis 44391 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia HLzonCape1 GCA_045269165.1 NCBI RI_Zcap_1.0 Chromosome 2024-11-25 The Roslin institute 15476969 71112957 NULL NULL NULL Zonotrichia_albicollis__white-throated_sparrow__zonAlb1__GCF_000385455.1 Zonotrichia albicollis white-throated sparrow 44394 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia zonAlb1 GCF_000385455.1 NCBI Zonotrichia_albicollis-1.0.1 Scaffold 2013-04-30 White-throated sparrow consortium 112748 4866725 -1 -1 -1 Zonotrichia_leucophrys_gambelii__white-crowned_sparrow__HLzonLeu1__GCF_028769735.1 Zonotrichia leucophrys gambelii white-crowned sparrow 257770 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia; Zonotrichia leucophrys HLzonLeu1 GCF_028769735.1 NCBI RI_Zleu_2.0 Chromosome 2023-12-27 The Roslin institute 14729340 71969017 -1 -1 -1 Dicaeum_eximium__Red-banded_flowerpecker__HLdicExi1__GCA_013396995.1 Dicaeum eximium Red-banded flowerpecker 667154 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Dicaeidae; Dicaeum HLdicExi1 GCA_013396995.1 NCBI ASM1339699v1 Scaffold 2020-07-10 B10K Consortium 117005 1096110 -1 -1 -1 Lonchura_striata_domestica__Bengalese_finch__HLlonStr2__GCA_005870125.1 Lonchura striata domestica Bengalese finch white-rumped munia,society finch,Lonchura domestica,white-backed munia 299123 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura HLlonStr2 GCA_005870125.1 NCBI lonStrDom2 Chromosome 2019-06-05 HHMI/UCSF 100423 71975342 -1 -1 -1 Lonchura_striata__White-rumped_munia__HLlonStri3__GCA_046129695.1 Lonchura striata White-rumped munia society finch,Lonchura domestica,Bengalese finch,white-backed munia,Lonchura striata domestica,Loxia striata 40157 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura HLlonStri3 GCA_046129695.1 NCBI bLonStr1.mat Chromosome 2024-12-18 Vertebrate Genomes Project 29140630 73424396 NULL NULL NULL Taeniopygia_guttata__zebra_finch__HLtaeGut4__GCA_003957565.2 Taeniopygia guttata zebra finch Poephila guttata,Taenopygia guttata 59729 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia HLtaeGut4 GCA_003957565.2 NCBI bTaeGut1_v1.p Chromosome 2019-05-16 Vertebrate Genomes Project 11998827 70430603 -1 -1 -1 Taeniopygia_guttata__zebra_finch__HLtaeGut5__GCF_003957565.2 Taeniopygia guttata zebra finch Taenopygia guttata,Poephila guttata 59729 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia HLtaeGut5 GCF_003957565.2 NCBI bTaeGut1.4.pri Chromosome 2021-05-04 Vertebrate Genomes Project 8964551 70982421 -1 -1 -1 Taeniopygia_guttata__Zebra_finch__HLtaeGutt6__GCF_048771995.1 Taeniopygia guttata Zebra finch Poephila guttata,Taenopygia guttata 59729 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia HLtaeGutt6 GCF_048771995.1 NCBI bTaeGut7.mat Chromosome 2025-03-21 Vertebrate Genomes Project 65033001 72089520 NULL NULL NULL Lagonosticta_rubricata__African_firefinch__HLlagRubr1__GCA_981464375.1 Lagonosticta rubricata African firefinch Fringilla rubricata 247514 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Lagonosticta HLlagRubr1 GCA_981464375.1 NCBI B10K-LU-20-04 Scaffold 2026-03-01 B10K project 102269 4449449 NULL NULL NULL Carpodacus_erythrinus__Common_rosefinch__HLcarEryt1A__GCA_046618715.1 Carpodacus erythrinus Common rosefinch Erythrina erythrina,Karmingimpel,Loxia erythrina 175930 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Carpodacus HLcarEryt1A GCA_046618715.1 NCBI RF_hap1 Contig 2025-01-14 Harvard University 12925667 12925667 NULL NULL NULL Coccothraustes_coccothraustes__Hawfinch__HLcocCocc1__GCA_965649865.1 Coccothraustes coccothraustes Hawfinch Loxia coccothraustes 37609 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Coccothraustes HLcocCocc1 GCA_965649865.1 NCBI bCocCoc1.h1 Chromosome 2025-07-31 ELIXIR Norway 7278480 73935772 NULL NULL NULL Haemorhous_mexicanus__House_finch__HLhaeMex1__GCF_027477595.1 Haemorhous mexicanus House finch Carpodacus mexicanus,Fringilla mexicana,Burrica mexicana,California linnet 30427 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Haemorhous HLhaeMex1 GCF_027477595.1 NCBI bHaeMex1.pri Chromosome 2022-12-29 Vertebrate Genomes Project 16787335 77212160 -1 -1 -1 Loxia_curvirostra__Fichtenkreuzschnabel__HLloxCur1__GCA_013398455.1 Loxia curvirostra Fichtenkreuzschnabel,red crossbill Loxia curvirostris 64802 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Loxia HLloxCur1 GCA_013398455.1 NCBI ASM1339845v1 Scaffold 2020-07-10 B10K Consortium 211346 3116274 -1 -1 -1 Loxia_leucoptera__white-winged_crossbill__HLloxLeu1__GCA_013396895.1 Loxia leucoptera white-winged crossbill 96539 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Loxia HLloxLeu1 GCA_013396895.1 NCBI ASM1339689v1 Scaffold 2020-07-10 B10K Consortium 96290 614047 -1 -1 -1 Melamprosops_phaeosoma__Poouli__HLmelPhae1__GCA_049724495.1 Melamprosops phaeosoma Poouli 385245 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Melamprosops HLmelPhae1 GCA_049724495.1 NCBI ASM4972449v1 Scaffold 2025-04-16 San Diego Zoo Wildlife Alliance 13224848 72985942 NULL NULL NULL Pyrrhula_murina__Azores_bullfinch__HLpyrMuri1__GCA_965183895.1 Pyrrhula murina Azores bullfinch Pyrrhula pyrrhula murina 928672 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Pyrrhula HLpyrMuri1 GCA_965183895.1 NCBI bPyrMur1.1 Chromosome 2025-03-04 Centro Nacional de AnĂ¡lisis GenĂ³mico 64819875 76036967 NULL NULL NULL Serinus_canaria__Common_canary__HLserCan2__GCF_022539315.1 Serinus canaria Common canary Fringilla canaria Linnaeus,Atlantic canary, 1758,Serinus canarius,canary 9135 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus HLserCan2 GCF_022539315.1 NCBI serCan2020 Chromosome 2022-08-25 Max Planck Institute for Biological Intelligence, in foundation, Seewiesen 12206373 72083177 -1 -1 -1 Serinus_canaria__Common_canary__HLserCana3A__GCA_055764355.1 Serinus canaria Common canary Fringilla canaria,canary,Serinus canarius,Atlantic canary 9135 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus HLserCana3A GCA_055764355.1 NCBI bSerCaa1.mat Chromosome 2026-03-10 Vertebrate Genomes Project 11621605 76898014 NULL NULL NULL Spinus_pinus__Pine_siskin__HLspiPinu1__GCA_053477405.1 Spinus pinus Pine siskin Fringilla pinus,Carduelis pinus 2201931 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Spinus HLspiPinu1 GCA_053477405.1 NCBI bSpiPin_pri1.0 Chromosome 2025-11-14 California State University, Stanislaus 19100671 63847955 NULL NULL NULL Spinus_tristis__American_goldfinch__HLspiTris1A__GCA_057381415.1 Spinus tristis American goldfinch Carduelis tristis,Fringilla tristis,Astragalinus tristis 54773 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Spinus HLspiTris1A GCA_057381415.1 NCBI bSpiTri1.hap1 Chromosome 2026-05-11 Vertebrate Genomes Project 10377979 67583936 NULL NULL NULL Hemignathus_virens__Hawaii_amakihi__HLhemVir1__GCA_003286495.1 Hemignathus virens Hawaii amakihi Chlorodrepanis virens,Viridonia virens,common amakihi 64799 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Chlorodrepanis HLhemVir1 GCA_003286495.1 NCBI ASM328649v1 Scaffold 2018-07-02 Smithsonian Institution NZP 23480 69780276 -1 -1 -1 Hemignathus_wilsoni__Akiapolaau__HLhemWil1__GCA_009690805.1 Hemignathus wilsoni Akiapolaau Chlorodrepanis virens wilsoni,Hemignathus virens wilsoni,Viridonia virens wilsoni,Heterorhynchus wilsoni 2518271 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Drepanidinae; Hemignathus HLhemWil1 GCA_009690805.1 NCBI HemiWil1.0 Scaffold 2019-11-22 Smithsonian Institution 69851 3340285 -1 -1 -1 Loxops_caeruleirostris__Akekee__HLloxCaer1__GCA_049724535.1 Loxops caeruleirostris Akekee Chrysomitridops caeruleirostris 509921 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Drepanidinae; Loxops HLloxCaer1 GCA_049724535.1 NCBI ASM4972453v1 Scaffold 2025-04-16 San Diego Zoo Wildlife Alliance 3773583 72176561 NULL NULL NULL Oreomystis_bairdi__Kauai_creeper__HLoreBair1__GCA_049724575.1 Oreomystis bairdi Kauai creeper Oreomyza bairdi,Oreomystis bairdii,Loxops maculata bairdi 64806 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Drepanidinae; Oreomystis HLoreBair1 GCA_049724575.1 NCBI ASM4972457v1 Scaffold 2025-04-16 San Diego Zoo Wildlife Alliance 11642057 67255391 NULL NULL NULL Calcarius_lapponicus__Lapland_longspur__HLcalLapp1__GCA_039654755.1 Calcarius lapponicus Lapland longspur Fringilla lapponica 135424 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Calcarius HLcalLapp1 GCA_039654755.1 NCBI RI_Cla_1.0 Chromosome 2024-05-17 The Roslin institute 1995792 72367164 NULL NULL NULL Calcarius_ornatus__Chestnut_collared_longspur__HLcalOrn1__GCA_013397715.1 Calcarius ornatus Chestnut collared longspur 198940 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Calcarius HLcalOrn1 GCA_013397715.1 NCBI ASM1339771v1 Scaffold 2020-07-10 B10K Consortium 52433 1242718 -1 -1 -1 Emberiza_calandra__Corn_bunting__HLembCala1__GCA_045783115.1 Emberiza calandra Corn bunting Miliaria calandra,Grauammer 460200 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza HLembCala1 GCA_045783115.1 NCBI ASM4578311v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 142367 6035664 NULL NULL NULL Emberiza_elegans__yellow-throated_bunting__HLembEle1__GCA_022818055.1 Emberiza elegans yellow-throated bunting Schoeniclus elegans 160761 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza HLembEle1 GCA_022818055.1 NCBI ASM2281805v1 Scaffold 2022-04-05 Institute of Zoology, Chinese Academy of Sciences 3607765 73992973 -1 -1 -1 Emberiza_fucata__Chestnut_eared_bunting__HLembFuc1__GCA_013398835.1 Emberiza fucata Chestnut eared bunting 337179 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza HLembFuc1 GCA_013398835.1 NCBI ASM1339883v1 Scaffold 2020-07-10 B10K Consortium 19687 892245 -1 -1 -1 Emberiza_rutila__Chestnut_bunting__HLembRuti1__GCA_051527255.1 Emberiza rutila Chestnut bunting 267979 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza HLembRuti1 GCA_051527255.1 NCBI ASM5152725v1 Scaffold 2025-07-24 Anhui University 133945 11172215 NULL NULL NULL Emberiza_tahapisi__Cinnamon-breated_bunting__HLembTaha1__GCA_058130095.1 Emberiza tahapisi Cinnamon-breated bunting 504327 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza HLembTaha1 GCA_058130095.1 NCBI bFriTah1.1.rep Chromosome 2026-06-09 University of Copenhagen 4594849 64191539 NULL NULL NULL Emberiza_spodocephala__Black-faced_bunting__HLembSpod1__GCA_055697235.1 Emberiza spodocephala Black-faced bunting 1776,Schoeniclus spodocephala Pallas,Schoeniclus spodocephala 125294 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza HLembSpod1 GCA_055697235.1 NCBI ASM5569723v1 Chromosome 2026-03-04 Anhui University 10073190 64073110 NULL NULL NULL Emberiza_schoeniclus_schoeniclus__Reed_bunting__HLembSchoSch1__GCA_982553565.1 Emberiza schoeniclus schoeniclus Reed bunting Schoeniclus schoeniclus,Fringilla schoeniclus schoeniclus,Rohrammer,Fringilla schoeniclus 505311 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Emberiza; Emberiza schoeniclus HLembSchoSch1 GCA_982553565.1 NCBI B10K-D-NMHD-110 Scaffold 2026-04-30 Center for Evolutionary Hologenomics, University of Copenhagen 117583 9105897 NULL NULL NULL Plectrophenax_nivalis__Snow_bunting__HLpleNiva1__GCA_045784665.1 Plectrophenax nivalis Snow bunting Calcarius nivalis,Emberiza nivalis 161627 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Emberizinae; Emberizini; Plectrophenax HLpleNiva1 GCA_045784665.1 NCBI ASM4578466v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 121462 6268521 NULL NULL NULL Fringilla_coelebs__Chaffinch__HLfriCoel2__GCA_963513975.1 Fringilla coelebs Chaffinch Buchfink 37598 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Fringillinae; Fringilla HLfriCoel2 GCA_963513975.1 NCBI bFriCoe1.1 Chromosome 2023-09-28 WELLCOME SANGER INSTITUTE 3733973 73246393 NULL NULL NULL Fringilla_coelebs_coelebs__chaffinch__HLfriCoeCoe1__GCA_015532645.1 Fringilla coelebs coelebs chaffinch Buchfink 1471794 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Fringillinae; Fringilla; Fringilla coelebs HLfriCoeCoe1 GCA_015532645.1 NCBI FrCoel Chromosome 2020-11-17 Museo Nacional de Ciencias Naturales 67082 68853404 -1 -1 -1 Peucedramus_taeniatus__olive_warbler__HLpeuTae1__GCA_013400575.1 Peucedramus taeniatus olive warbler 135441 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Peucedraminae; Peucedramus HLpeuTae1 GCA_013400575.1 NCBI ASM1340057v1 Scaffold 2020-07-10 B10K Consortium 61982 183857 -1 -1 -1 Urocynchramus_pylzowi__Przevalskis_finch__HLuroPyl1__GCA_013397555.1 Urocynchramus pylzowi Przevalskis finch 571890 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Urocynchramus HLuroPyl1 GCA_013397555.1 NCBI ASM1339755v1 Scaffold 2020-07-10 B10K Consortium 53989 858275 -1 -1 -1 Agelaius_phoeniceus__red-winged_blackbird__HLagePho3__GCF_020745825.1 Agelaius phoeniceus red-winged blackbird Oriolus phoeniceus,Agelaius phoniceus 39638 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Agelaius HLagePho3 GCF_020745825.1 NCBI Agelaius phoeniceus 1.1 Chromosome 2023-03-15 Brood Parasitic Bird Genomes Consortium 22833505 36435137 -1 -1 -1 Agelaius_phoeniceus__Red-winged_blackbird__HLagePhoe4A__GCF_051311805.1 Agelaius phoeniceus Red-winged blackbird Oriolus phoeniceus,Agelaius phoniceus 39638 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Agelaius HLagePhoe4A GCF_051311805.1 NCBI bAgePho1.hap1 Chromosome 2025-07-14 Vertebrate Genomes Project 30085171 73898474 NULL NULL NULL Agelaius_tricolor__tricolored_blackbird__HLageTri2__GCA_023055355.1 Agelaius tricolor tricolored blackbird Icterus tricolor 9191 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Agelaius HLageTri2 GCA_023055355.1 NCBI bAgeTri1.0.p Scaffold 2022-04-19 UCLA 22601135 47739980 -1 -1 -1 Molothrus_aeneus__Bronzed_cowbird__HLmolAen1__GCA_037042795.1 Molothrus aeneus Bronzed cowbird 84833 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Molothrus HLmolAen1 GCA_037042795.1 NCBI BPBGC_Maene_1.0 Chromosome 2024-03-07 Brood Parasitic Bird Genomes Consortium 25845000 70606200 -1 -1 -1 Molothrus_ater__Brown_headed_cowbird__HLmolAte1__GCA_012460135.1 Molothrus ater Brown headed cowbird 84834 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Molothrus HLmolAte1 GCA_012460135.1 NCBI BPBGC_Mater_1.0 Chromosome 2020-04-20 Brood Parasitic Bird Genomes Consortium 13273966 52124711 -1 -1 -1 Molothrus_ater__brown-headed_cowbird__HLmolAte3__GCA_012460135.3 Molothrus ater brown-headed cowbird Oriolus ater 84834 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Molothrus HLmolAte3 GCA_012460135.3 NCBI BPBGC_Mater_1.1 Chromosome 2022-10-11 Brood Parasitic Bird Genomes Consortium 13273966 70107701 -1 -1 -1 Molothrus_ater__Brown-headed_cowbird__HLmolAter4A__GCA_057560355.1 Molothrus ater Brown-headed cowbird Oriolus ater 84834 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Molothrus HLmolAter4A GCA_057560355.1 NCBI bMolAte1.hap1 Chromosome 2026-05-15 Vertebrate Genomes Project 18290873 63046713 NULL NULL NULL Quiscalus_major__Boat-tailed_grackle__HLquiMajo1A__GCA_047301405.1 Quiscalus major Boat-tailed grackle 84780 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Quiscalus HLquiMajo1A GCA_047301405.1 NCBI bQuiMaj1.1.hap1 Scaffold 2025-01-29 Louisiana State University 3214539 70945146 NULL NULL NULL Quiscalus_mexicanus__Great-tailed_grackle__HLquiMex1__GCA_013399035.1 Quiscalus mexicanus Great-tailed grackle 64278 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Icteridae; Quiscalus HLquiMex1 GCA_013399035.1 NCBI ASM1339903v1 Scaffold 2020-07-10 B10K Consortium 60532 93215 -1 -1 -1 Melanocharis_versteri__Fan-tailed_berrypecker__HLmelVer1__GCA_013397845.1 Melanocharis versteri Fan-tailed berrypecker 254552 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Melanocharitidae; Melanocharis HLmelVer1 GCA_013397845.1 NCBI ASM1339784v1 Scaffold 2020-07-10 B10K Consortium 103752 854663 -1 -1 -1 Anthus_petrosus__European_rock_pipit__HLantPetr1__GCA_045784945.1 Anthus petrosus European rock pipit Alauda petrosa 45801 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Anthus HLantPetr1 GCA_045784945.1 NCBI ASM4578494v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 197839 17879394 NULL NULL NULL Anthus_cervinus__Red-throated_pipit__HLantCerv1__GCA_982556215.1 Anthus cervinus Red-throated pipit Motacilla cervina 45805 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Anthus HLantCerv1 GCA_982556215.1 NCBI B10K-DU-022-50 Scaffold 2026-04-29 Center for Evolutionary Hologenomics, University of Copenhagen 131128 10608801 NULL NULL NULL Motacilla_citreola__Citrine_wagtail__HLmotCitr1__GCA_045787205.1 Motacilla citreola Citrine wagtail 179817 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla HLmotCitr1 GCA_045787205.1 NCBI ASM4578720v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 174891 23307826 NULL NULL NULL Motacilla_tschutschensis__eastern_yellow_wagtail__HLmotTsc1__GCA_018904545.1 Motacilla tschutschensis eastern yellow wagtail Motacilla flava tschutschensis 662061 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla HLmotTsc1 GCA_018904545.1 NCBI ASM1890454v1 Scaffold 2021-06-16 University of Colorado 98155 5483466 -1 -1 -1 Motacilla_alba_alba__white_wagtail__HLmotAlbAlb2__GCA_015832195.1 Motacilla alba alba white wagtail Bachstelze 1094192 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla; Motacilla alba HLmotAlbAlb2 GCA_015832195.1 NCBI Motacilla_alba_V1.0_pri Chromosome 2020-12-08 Uppsala University 8515530 72386170 -1 -1 -1 Leptocoma_aspasia__Black_sunbird__HLlepAsp1__GCA_013399835.1 Leptocoma aspasia Black sunbird Cinnyris aspasia 2585812 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Nectariniidae; Leptocoma HLlepAsp1 GCA_013399835.1 NCBI ASM1339983v1 Scaffold 2020-07-10 B10K Consortium 89252 743438 -1 -1 -1 Promerops_cafer__Cape_sugarbird__HLproCaf1__GCA_013398275.1 Promerops cafer Cape sugarbird 254652 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Nectariniidae; Promerops HLproCaf1 GCA_013398275.1 NCBI ASM1339827v1 Scaffold 2020-07-10 B10K Consortium 128262 1179653 -1 -1 -1 Oreocharis_arfaki__tit_berrypecker__HLoreArf1__GCA_013398015.1 Oreocharis arfaki tit berrypecker 979223 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Paramythiidae; Oreocharis HLoreArf1 GCA_013398015.1 NCBI ASM1339801v1 Scaffold 2020-07-10 B10K Consortium 109596 636482 -1 -1 -1 Geothlypis_philadelphia__Mourning_warbler__HLgeoPhil1__GCA_051175835.1 Geothlypis philadelphia Mourning warbler Sylvia philadelphia,Oporornis philadelphia 245564 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Geothlypis HLgeoPhil1 GCA_051175835.1 NCBI bGeoPhi1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 5709434 5709434 NULL NULL NULL Geothlypis_trichas__common_yellowthroat__HLgeoTri1__GCA_009764595.1 Geothlypis trichas common yellowthroat 1766),Geothlypis trichas (Linnaeus 135433 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Geothlypis HLgeoTri1 GCA_009764595.1 NCBI bGeoTri1.pri Chromosome 2019-12-19 G10K 3247339 72541719 -1 -1 -1 Leiothlypis_celata__Orange-crowned_warbler__HLleiCela1__GCA_051176495.1 Leiothlypis celata Orange-crowned warbler Vermivora celata,Oreothlypis celata,Sylvia celatus 62259 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Leiothlypis HLleiCela1 GCA_051176495.1 NCBI bLeiCel1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 11613869 11613869 NULL NULL NULL Leiothlypis_peregrina__Tennessee_warbler__HLleiPere1__GCA_051176395.1 Leiothlypis peregrina Tennessee warbler Vermivora peregrina,Oreothlypis peregrina,Sylvia peregrina 1610824 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Leiothlypis HLleiPere1 GCA_051176395.1 NCBI bLeiPer1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 18951180 18951180 NULL NULL NULL Leiothlypis_ruficapilla__Nashville_warbler__HLleiRufi1__GCA_051176345.1 Leiothlypis ruficapilla Nashville warbler Oreothlypis ruficapilla (Wilson,Oreothlypis ruficapilla, 1811) 125952 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Leiothlypis HLleiRufi1 GCA_051176345.1 NCBI bOreRuf1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 9737246 9737246 NULL NULL NULL Myioborus_ornatus__Golden-fronted_whitestart__HLmyiOrna1A__GCA_057814835.1 Myioborus ornatus Golden-fronted whitestart Setophaga ornata 328440 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Myioborus HLmyiOrna1A GCA_057814835.1 NCBI bMyiOra2.hap1 Chromosome 2026-06-01 Vertebrate Genomes Project 32393182 73508879 NULL NULL NULL Setophaga_kirtlandii__Kirtlands_warbler__HLsetKir1__GCA_013399655.1 Setophaga kirtlandii Kirtlands warbler Dendroica kirtlandii 298831 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Setophaga HLsetKir1 GCA_013399655.1 NCBI ASM1339965v1 Scaffold 2020-07-10 B10K Consortium 77437 583164 -1 -1 -1 Setophaga_palmarum__Palm_warbler__HLsetPalm1__GCA_051176245.1 Setophaga palmarum Palm warbler Dendroica palmarum,Motacilla palmarum 231567 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Setophaga HLsetPalm1 GCA_051176245.1 NCBI bSetPal1_p1.1 Scaffold 2025-07-02 Canada's national platform for genome sequencing and analysis 9559700 9559700 NULL NULL NULL Setophaga_petechia__yellow_warbler__HLsetPet1__GCA_024362935.1 Setophaga petechia yellow warbler Dendroica petechia 123631 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Setophaga HLsetPet1 GCA_024362935.1 NCBI bSetPet1.0.p Scaffold 2022-07-22 UCLA 6807045 21188473 -1 -1 -1 Setophaga_striata__Blackpoll_warbler__HLsetStri1__GCA_045784235.1 Setophaga striata Blackpoll warbler black-poll warbler,Dendroica striata 1212470 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Setophaga HLsetStri1 GCA_045784235.1 NCBI ASM4578423v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 146435 29315148 NULL NULL NULL Setophaga_coronata_coronata__myrtle_warbler__HLsetCorCor2__GCA_001746935.2 Setophaga coronata coronata myrtle warbler Dendroica coronata,yellow-rumped warbler,Dendroica coronata coronata,Motacilla coronata 1037456 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Parulidae; Setophaga; Setophaga coronata HLsetCorCor2 GCA_001746935.2 NCBI mywa_2.1 Chromosome 2020-12-08 Cornell University 43576 71386623 -1 -1 -1 Erythrura_gouldiae__Gouldian_finch__HLeryGou1__GCA_003676055.1 Erythrura gouldiae Gouldian finch Chloebia gouldiae gouldiae,Chloebia gouldiae 44316 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Chloebia HLeryGou1 GCA_003676055.1 NCBI GouldianFinch Scaffold 2018-10-23 CIBIO/InBIO Research Center in Biodiversity and Genetic Resources 137954 17126938 -1 -1 -1 Montifringilla_adamsi__black-winged_snowfinch__HLmonAda1__GCA_017590115.1 Montifringilla adamsi black-winged snowfinch 356906 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Montifringilla HLmonAda1 GCA_017590115.1 NCBI ASM1759011v1 Scaffold 2021-03-26 Institute of Zoology, Chinese Academy of Sciences 466425 10057884 -1 -1 -1 Onychostruthus_taczanowskii__white-rumped_snowfinch__HLonyTac1__GCF_017590055.1 Onychostruthus taczanowskii white-rumped snowfinch Montifringilla taczanowskii 356909 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Onychostruthus HLonyTac1 GCF_017590055.1 NCBI ASM1759005v1 Scaffold 2021-03-26 Institute of Zoology, Chinese Academy of Sciences 867338 9074114 -1 -1 -1 Passer_domesticus__House_sparrow__HLpasDom1__GCA_001700915.1 Passer domesticus House sparrow Haussperling 48849 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer HLpasDom1 GCA_001700915.1 NCBI Passer_domesticus-1.0 Chromosome 2016-08-31 Sparrow Genome Consortium 51426 6373860 -1 -1 -1 Passer_domesticus__House_sparrow__HLpasDom2__GCF_036417665.1 Passer domesticus House sparrow Fringilla domestica,Haussperling 48849 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer HLpasDom2 GCF_036417665.1 NCBI bPasDom1.hap1 Chromosome 2024-02-07 Vertebrate Genomes Project 20590000 83066519 -1 -1 -1 Passer_montanus__Eurasian_tree_sparrow__HLpasMon1__GCA_014805655.1 Passer montanus Eurasian tree sparrow tree sparrow 9160 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer HLpasMon1 GCA_014805655.1 NCBI ASM1480565v1 Scaffold 2020-09-30 Institute of Zoology, Chinese Academy of Sciences 1083540 11160574 -1 -1 -1 Pyrgilauda_ruficollis__rufous-necked_snowfinch__HLpyrRuf1__GCF_017590135.1 Pyrgilauda ruficollis rufous-necked snowfinch Montifringilla ruficollis 221976 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda HLpyrRuf1 GCF_017590135.1 NCBI ASM1759013v1 Scaffold 2021-03-26 Institute of Zoology, Chinese Academy of Sciences 660259 9601729 -1 -1 -1 Ploceus_nigricollis__Black_necked_weaver__HLploNig1__GCA_013399945.1 Ploceus nigricollis Black necked weaver 441696 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Ploceidae; Ploceinae; Ploceus HLploNig1 GCA_013399945.1 NCBI ASM1339994v1 Scaffold 2020-07-10 B10K Consortium 74004 730145 -1 -1 -1 Prunella_collaris__Alpine_accentor__HLpruColl1__GCA_045785095.1 Prunella collaris Alpine accentor Sturnus collaris 175133 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Prunellidae; Prunella HLpruColl1 GCA_045785095.1 NCBI ASM4578509v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 157374 17539585 NULL NULL NULL Prunella_himalayana__Altai_accentor__HLpruHim1__GCA_013398875.1 Prunella himalayana Altai accentor 670356 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Prunellidae; Prunella HLpruHim1 GCA_013398875.1 NCBI ASM1339887v1 Scaffold 2020-07-10 B10K Consortium 38296 1815815 -1 -1 -1 Prunella_strophiata__Rufous-breasted_accentor__HLpruStro1__GCA_036583965.1 Prunella strophiata Rufous-breasted accentor Accentor strophiatus 1351675 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Prunellidae; Prunella HLpruStro1 GCA_036583965.1 NCBI ASM3658396v1 Scaffold 2024-02-13 The institute of zoology, CAS, Beijing, China 8724871 70679835 NULL NULL NULL Anomalospiza_imberbis__Cuckoo_finch__HLanoImb2__GCA_031753505.1 Anomalospiza imberbis Cuckoo finch Crithagra imberbis 187417 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Viduidae; Anomalospiza HLanoImb2 GCA_031753505.1 NCBI ASM3175350v1 Chromosome 2023-09-22 Brood Parasitic Bird Genomes Consortium 12312023 72455167 -1 -1 -1 Vidua_chalybeata__Village_indigobird__HLvidCha1__GCA_013398495.1 Vidua chalybeata Village indigobird 81927 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Viduidae; Vidua HLvidCha1 GCA_013398495.1 NCBI ASM1339849v1 Scaffold 2020-07-10 B10K Consortium 387567 916466 -1 -1 -1 Vidua_chalybeata__Village_indigobird__HLvidCha2__GCA_026979565.1 Vidua chalybeata Village indigobird 81927 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Viduidae; Vidua HLvidCha2 GCA_026979565.1 NCBI bVidCha1 merged haplotype Chromosome 2022-12-21 Vertebrate Genomes Project 15819291 72553174 -1 -1 -1 Vidua_macroura__Pin-tailed_whydah__HLvidMac2__GCA_024509145.1 Vidua macroura Pin-tailed whydah 187451 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Viduidae; Vidua HLvidMac2 GCA_024509145.1 NCBI ASM2450914v1 Chromosome 2022-08-03 University of Missouri 7488902 61801348 -1 -1 -1 Drymodes_brunneopygia__Southern_scrub_robin__HLdryBru1__GCA_013400955.1 Drymodes brunneopygia Southern scrub robin 626378 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Petroicidae; Drymodes HLdryBru1 GCA_013400955.1 NCBI ASM1340095v1 Scaffold 2020-07-10 B10K Consortium 79910 443364 -1 -1 -1 Eopsaltria_australis__eastern_yellow_robin__HLeopAus1__GCA_003426825.1 Eopsaltria australis eastern yellow robin Motacilla australis 44318 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Petroicidae; Eopsaltria HLeopAus1 GCA_003426825.1 NCBI eyr_v1 Scaffold 2018-08-23 Deakin University 641411 987278 -1 -1 -1 Eopsaltria_australis__eastern_yellow_robin__HLeopAus2 Eopsaltria australis eastern yellow robin Motacilla australis 44318 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Petroicidae; Eopsaltria HLeopAus2 DNA Zoo Consortium DNA Zoo Consortium 2021-11-01 1482134 111210322 -1 -1 -1 Chaetops_frenatus__Rufous_rock-jumper__HLchaFre1__GCA_013400775.1 Chaetops frenatus Rufous rock-jumper 221966 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Picathartidae; Chaetops HLchaFre1 GCA_013400775.1 NCBI ASM1340077v1 Scaffold 2020-07-10 B10K Consortium 34663 250297 -1 -1 -1 Picathartes_gymnocephalus__White_necked_rockfowl__HLpicGym1__GCA_013390045.1 Picathartes gymnocephalus White necked rockfowl 175131 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Picathartidae; Picathartes HLpicGym1 GCA_013390045.1 NCBI ASM1339004v1 Scaffold 2020-07-06 B10K Consortium 36514 110339 -1 -1 -1 Chiroxiphia_lanceolata__lance-tailed_manakin__HLchiLan1__GCA_009829145.1 Chiroxiphia lanceolata lance-tailed manakin 296741 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia HLchiLan1 GCA_009829145.1 NCBI bChiLan1.pri Chromosome 2020-01-03 Vertebrate Genomes Project 18496167 75608808 -1 -1 -1 Corapipo_altera__White-ruffed_manakin__HLcorAlt1__GCA_003945725.1 Corapipo altera White-ruffed manakin 415028 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Corapipo HLcorAlt1 GCA_003945725.1 NCBI ASM394572v1 Scaffold 2018-12-14 Smithsonian Institution 262501 12385833 -1 -1 -1 Lepidothrix_coronata__blue-crowned_manakin__HLlepCor1__GCA_001604755.1 Lepidothrix coronata blue-crowned manakin Pipra coronata 321398 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Lepidothrix HLlepCor1 GCA_001604755.1 NCBI Lepidothrix_coronata-1.0 Scaffold 2016-03-31 McDonnell Genome Institute 141849 4972619 -1 -1 -1 Manacus_candei__White-collared_manakin__HLmanCan1__GCF_025592945.1 Manacus candei White-collared manakin Pipra candei 415023 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus HLmanCan1 GCF_025592945.1 NCBI ASM2559294v1 Contig 2022-10-05 Smithsonian Institution National Museum of Natural History 15991245 15991245 -1 -1 -1 Manacus_vitellinus__golden-collared_manakin__HLmanVit1__GCA_001715985.3 Manacus vitellinus golden-collared manakin 328815 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus HLmanVit1 GCA_001715985.3 NCBI ASM171598v3 Scaffold 2019-07-03 Smithsonian Institution National Museum of Natural History 290580 17883582 -1 -1 -1 Neopelma_chrysocephalum__saffron-crested_tyrant-manakin__HLneoChr1__GCA_003984885.2 Neopelma chrysocephalum saffron-crested tyrant-manakin 114329 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Neopelma HLneoChr1 GCA_003984885.2 NCBI ASM398488v2 Scaffold 2018-12-28 Smithsonian Institution 237029 10517223 -1 -1 -1 Pipra_filicauda__Wire-tailed_manakin__HLpipFil1__GCA_003945595.1 Pipra filicauda Wire-tailed manakin 649802 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Pipra HLpipFil1 GCA_003945595.1 NCBI ASM394559v1 Scaffold 2018-12-14 Smithsonian Institution 1585402 1695450 -1 -1 -1 Piprites_chloris__white-winged_piprites__HLpipChl1__GCA_013399295.1 Piprites chloris white-winged piprites 114369 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Piprites HLpipChl1 GCA_013399295.1 NCBI ASM1339929v1 Scaffold 2020-07-10 B10K Consortium 75890 2866662 -1 -1 -1 Pseudopipra_pipra__white-crowned_manakin__HLpsePip1A__GCF_036250125.1 Pseudopipra pipra white-crowned manakin Pipra pipra,Parus pipra,Dixiphia pipra 415032 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Pseudopipra HLpsePip1A GCF_036250125.1 NCBI bDixPip1.hap1 Chromosome 2024-01-31 Vertebrate Genomes Project 10447158 75011098 -1 -1 -1 Pseudopipra_pipra__white-crowned_manakin__HLpsePip1B__GCA_036250135.1 Pseudopipra pipra white-crowned manakin Pipra pipra,Parus pipra,Dixiphia pipra 415032 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Pseudopipra HLpsePip1B GCA_036250135.1 NCBI bDixPip1.hap2 Chromosome 2024-01-31 Vertebrate Genomes Project 11116877 75989417 -1 -1 -1 Pitta_sordida__hooded_pitta__HLpitSor1__GCA_013390025.1 Pitta sordida hooded pitta 9163 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pittidae; Pitta HLpitSor1 GCA_013390025.1 NCBI ASM1339002v1 Scaffold 2020-07-06 B10K Consortium 41696 176673 -1 -1 -1 Amblyornis_subalaris__streaked_bowerbird__HLambSub1__GCA_018881555.1 Amblyornis subalaris streaked bowerbird striped bowerbird 34926 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Ptilonorhynchidae; Amblyornis HLambSub1 GCA_018881555.1 NCBI ASM1888155v1 Scaffold 2021-06-14 Swedish Museum of Natural History 695827 5791924 -1 -1 -1 Ptilonorhynchus_violaceus__satin_bowerbird__HLptiVio1__GCA_013397565.1 Ptilonorhynchus violaceus satin bowerbird 28724 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Ptilonorhynchidae; Ptilonorhynchus HLptiVio1 GCA_013397565.1 NCBI ASM1339756v1 Scaffold 2020-07-10 B10K Consortium 120946 1215016 -1 -1 -1 Regulus_satrapa__golden-crowned_kinglet__HLregSat1__GCA_013396955.1 Regulus satrapa golden-crowned kinglet 13245 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Regulidae; Regulus HLregSat1 GCA_013396955.1 NCBI ASM1339695v1 Scaffold 2020-07-10 B10K Consortium 28936 363229 -1 -1 -1 Rhabdornis_inornatus__Stripe-breasted_rhabdornis__HLrhaIno1__GCA_013397075.1 Rhabdornis inornatus Stripe-breasted rhabdornis 237438 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Rhabdornithidae; Rhabdornis HLrhaIno1 GCA_013397075.1 NCBI ASM1339707v1 Scaffold 2020-07-10 B10K Consortium 152176 1047454 -1 -1 -1 Scytalopus_superciliaris__White_browed_tapaculo__HLscySup1__GCA_013400415.1 Scytalopus superciliaris White browed tapaculo 312124 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Rhinocryptidae; Scytalopus HLscySup1 GCA_013400415.1 NCBI ASM1340041v1 Scaffold 2020-07-10 B10K Consortium 60031 632025 -1 -1 -1 Chaetorhynchus_papuensis__pygmy_drongo__HLchaPap1__GCA_013396525.1 Chaetorhynchus papuensis pygmy drongo 254446 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Rhipiduridae; Chaetorhynchus HLchaPap1 GCA_013396525.1 NCBI ASM1339652v1 Scaffold 2020-07-10 B10K Consortium 96574 712200 -1 -1 -1 Rhipidura_dahli__Bismarck_fantail__HLrhiDah1__GCA_013399225.1 Rhipidura dahli Bismarck fantail 667186 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Rhipiduridae; Rhipidura HLrhiDah1 GCA_013399225.1 NCBI ASM1339922v1 Scaffold 2020-07-10 B10K Consortium 98056 789307 -1 -1 -1 Sitta_carolinensis__White-breasted_nuthatch__HLsitCaro1A__GCA_054054645.1 Sitta carolinensis White-breasted nuthatch 50250 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sittidae; Sitta HLsitCaro1A GCA_054054645.1 NCBI bSitCar1.hap1 Chromosome 2025-12-17 Vertebrate Genomes Project 12525117 45476553 NULL NULL NULL Sitta_europaea__wood_nuthatch__HLsitEur1__GCA_013400255.1 Sitta europaea wood nuthatch Kleiber 50251 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sittidae; Sitta HLsitEur1 GCA_013400255.1 NCBI ASM1340025v1 Scaffold 2020-07-10 B10K Consortium 79571 660828 -1 -1 -1 Elminia_nigromitrata__Dusky_crested-flycatcher__HLelmNigr1__GCA_041045045.1 Elminia nigromitrata Dusky crested-flycatcher Trochocercus nigromitratus,Terpsiphone nigromitrata 107234 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Stenostiridae; Elminia HLelmNigr1 GCA_041045045.1 NCBI ASM4104504v1 Scaffold 2024-08-05 Iridian Genomes 32485 71327542 NULL NULL NULL Acridotheres_javanicus__Javan_myna__HLacrJav1__GCA_002849675.1 Acridotheres javanicus Javan myna Acridotheres fuscus javanicus 451385 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Acridotheres HLacrJav1 GCA_002849675.1 NCBI ASM284967v1 Scaffold 2018-01-02 National University of Singapore 144184 5538430 -1 -1 -1 Acridotheres_tristis__Common_myna__HLacrTris1__GCA_027559615.1 Acridotheres tristis Common myna Paradisea tristis,Sturnus tristis 279927 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Acridotheres HLacrTris1 GCA_027559615.1 NCBI bAcrTri1.pri Chromosome 2023-01-09 Vertebrate Genomes Project 7308823 75254055 NULL NULL NULL Lamprotornis_superbus__Superb_starling__HLlamSup1__GCA_015883425.1 Lamprotornis superbus Superb starling 245042 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Lamprotornis HLlamSup1 GCA_015883425.1 NCBI CU_Lasu_v1 Scaffold 2020-12-09 Columbia University 150333 4390367 -1 -1 -1 Leucopsar_rothschildi__Bali_myna__HLleuRot1__GCA_013397325.1 Leucopsar rothschildi Bali myna 127929 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Leucopsar HLleuRot1 GCA_013397325.1 NCBI ASM1339732v1 Scaffold 2020-07-10 B10K Consortium 93565 605901 -1 -1 -1 Pastor_roseus__Rosy_starling__HLpasRose1__GCA_045787025.1 Pastor roseus Rosy starling Sturnus roseus,Sturnus roseus (Linnaeus, 1758) 451427 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Pastor HLpasRose1 GCA_045787025.1 NCBI ASM4578702v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 147454 17908476 NULL NULL NULL Sturnus_vulgaris__Common_starling__HLstuVul1__GCA_001447265.1 Sturnus vulgaris Common starling starling,European starling 9172 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Sturnus HLstuVul1 GCA_001447265.1 NCBI Sturnus_vulgaris-1.0 Scaffold 2015-11-20 McDonnell Genome Institute - Washington University School of Medicine 151865 3416708 -1 -1 -1 Sturnus_vulgaris__Common_starling__HLstuVulg2A__GCA_052056855.1 Sturnus vulgaris Common starling starling,European starling 9172 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Sturnus HLstuVulg2A GCA_052056855.1 NCBI bStuVul1.hap1 Chromosome 2025-08-15 Vertebrate Genomes Project 14719593 73111058 NULL NULL NULL Aegithalos_caudatus__Northern_long-tailed_tit__HLaegCau1__GCA_013389925.1 Aegithalos caudatus Northern long-tailed tit Long-tailed Tit 73327 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Aegithalidae; Aegithalos HLaegCau1 GCA_013389925.1 NCBI ASM1338992v1 Scaffold 2020-07-06 B10K Consortium 34055 311465 -1 -1 -1 Alauda_arvensis__Eurasian_skylark__HLalaArv1__GCA_902810485.1 Alauda arvensis Eurasian skylark 88112 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Alaudidae; Alauda HLalaArv1 GCA_902810485.1 NCBI skylark_genome Scaffold 2020-03-13 UNIVERSITY OF EDINBURGH 79699 1430931 -1 -1 -1 Alaudala_cheleensis__Asian_short-toed_lark__HLalaChe1__GCA_013398995.1 Alaudala cheleensis Asian short-toed lark Calandrella cheleensis,Calandrella rufescens cheleensis 670337 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Alaudidae; Alaudala HLalaChe1 GCA_013398995.1 NCBI ASM1339899v1 Scaffold 2020-07-10 B10K Consortium 96766 398825 -1 -1 -1 Eremophila_alpestris_peregrina__horned_lark__HLereAlp1__GCA_009792885.1 Eremophila alpestris peregrina horned lark Chionophila alpestris,Alauda alpestris 2668079 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Alaudidae; Eremophila; Eremophila alpestris HLereAlp1 GCA_009792885.1 NCBI CLO_EAlp_1.0 Scaffold 2019-12-23 Cornell University 193817 9421811 -1 -1 -1 Cisticola_juncidis__Zitting_cisticola__HLcisJun1__GCA_013400215.1 Cisticola juncidis Zitting cisticola 52622 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Cisticolidae; Cisticola HLcisJun1 GCA_013400215.1 NCBI ASM1340021v1 Scaffold 2020-07-10 B10K Consortium 74140 873777 -1 -1 -1 Prinia_subflava__tawny-flanked_prinia__HLpriSub1__GCA_021018805.1 Prinia subflava tawny-flanked prinia 208062 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Cisticolidae; Prinia HLpriSub1 GCA_021018805.1 NCBI Cam_Psub_1.0 Chromosome 2021-12-02 University of Missouri 7984634 53574047 -1 -1 -1 Delichon_dasypus__Asian_house_martin__HLdelDasy1__GCA_037837765.1 Delichon dasypus Asian house martin Chelidon dasypus 317145 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Delichon HLdelDasy1 GCA_037837765.1 NCBI ASM3783776v1 Scaffold 2024-03-29 Academia Sinica 20730791 74747089 NULL NULL NULL Hirundo_rustica__Barn_swallow__HLhirRus2__GCA_015227805.1 Hirundo rustica Barn swallow Rauchschwalbe 43150 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo HLhirRus2 GCA_015227805.1 NCBI bHirRus1.pri Chromosome 2020-11-04 Vertebrate Genomes Project 2794774 76187387 -1 -1 -1 Hirundo_rustica_rustica__Barn_swallow__HLhirRus1__GCA_003692655.1 Hirundo rustica rustica Barn swallow Rauchschwalbe 333673 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo; Hirundo rustica HLhirRus1 GCA_003692655.1 NCBI Chelidonia Scaffold 2018-10-29 University of Milan 6124600 25954216 -1 -1 -1 Progne_subis_subis__Purple_martin__HLproSubSub1__GCA_022316685.1 Progne subis subis Purple martin 519845 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Progne; Progne subis HLproSubSub1 GCA_022316685.1 NCBI UM_PSub_1 Scaffold 2022-02-17 University of Manitoba 3084734 6129949 -1 -1 -1 Riparia_riparia__Sand_martin__HLripRip1__GCA_020917445.1 Riparia riparia Sand martin 88110 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Riparia HLripRip1 GCA_020917445.1 NCBI IEE_cmpg_Riparia_riparia_6505 Scaffold 2021-11-22 Institute of Ecology and Evolution, University of Bern 43283 13690488 -1 -1 -1 Argya_squamiceps__Arabian_babbler__HLargSqua1__GCA_037834095.1 Argya squamiceps Arabian babbler Malurus squamiceps,Turdoides squamiceps,Turdoides squameiceps 1156349 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Leiothrichidae; Argya HLargSqua1 GCA_037834095.1 NCBI ASM3783409v1 Scaffold 2024-03-29 Iridian Genomes 48384 72073535 NULL NULL NULL Leiothrix_lutea__red-billed_leiothrix__HLleiLut1__GCA_013400445.1 Leiothrix lutea red-billed leiothrix Pekin robin 36275 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Leiothrichidae; Leiothrix HLleiLut1 GCA_013400445.1 NCBI ASM1340044v1 Scaffold 2020-07-10 B10K Consortium 27764 297511 -1 -1 -1 Trochalopteron_elliotii__Elliots_laughingthrush__HLtroEll1__GCA_024734555.1 Trochalopteron elliotii Elliots laughingthrush Garrulax ellioti,Garrulax elliotii 520170 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Leiothrichidae; Trochalopteron HLtroEll1 GCA_024734555.1 NCBI CL100093368_L02 Scaffold 2022-08-23 Institute of Zoology, Chinese Academy of Sciences 115278 2732127 -1 -1 -1 Locustella_ochotensis__Middendorffs_grasshopper-warbler__HLlocOch1__GCA_013400155.1 Locustella ochotensis Middendorffs grasshopper-warbler 187437 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Locustellidae; Helopsaltes HLlocOch1 GCA_013400155.1 NCBI ASM1340015v1 Scaffold 2020-07-10 B10K Consortium 58272 653738 -1 -1 -1 Locustella_lanceolata__Lanceolated_warbler__HLlocLanc1__GCA_045788125.1 Locustella lanceolata Lanceolated warbler Sylvia lanceolata 260104 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Locustellidae; Locustella HLlocLanc1 GCA_045788125.1 NCBI ASM4578812v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 134424 12835253 NULL NULL NULL Phylloscopus_collybita__Eurasian_chiffchaff__HLphyColl1__GCA_027886175.1 Phylloscopus collybita Eurasian chiffchaff Sylvia collybita 48150 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Phylloscopidae; Phylloscopus HLphyColl1 GCA_027886175.1 NCBI LUni_PhColl_1 Contig 2023-01-17 Lund University 28093532 28093532 NULL NULL NULL Phylloscopus_ibericus__Iberian_chiffchaff__HLphyIber1__GCA_045786995.1 Phylloscopus ibericus Iberian chiffchaff Phylloscopus collybita brehmii,Phylloscopus brehmi,Phylloscopus brehmii 1689810 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Phylloscopidae; Phylloscopus HLphyIber1 GCA_045786995.1 NCBI ASM4578699v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 143966 20112371 NULL NULL NULL Phylloscopus_trochiloides__Greenish_warbler__HLphyTroc1__GCA_048593965.1 Phylloscopus trochiloides Greenish warbler Acanthiza trochiloides 48154 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Phylloscopidae; Phylloscopus HLphyTroc1 GCA_048593965.1 NCBI ASM4859396v1 Chromosome 2025-03-17 University of British Columbia 7376425 77876639 NULL NULL NULL Phylloscopus_whistleri__Whistlers_warbler__HLphyWhi1__GCA_017589585.1 Phylloscopus whistleri Whistlers warbler Seicercus whistleri 274622 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Phylloscopidae; Phylloscopus HLphyWhi1 GCA_017589585.1 NCBI ASM1758958v1 Contig 2021-03-26 Institute of Zoology, Chinese Academy of Sciences 3796120 3796120 -1 -1 -1 Phylloscopus_trochilus_acredula__Willow_warbler__HLphyTro1__GCA_002305835.1 Phylloscopus trochilus acredula Willow warbler 209779 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Phylloscopidae; Phylloscopus; Phylloscopus trochilus HLphyTro1 GCA_002305835.1 NCBI ASM230583v1 Scaffold 2016-06-08 Lund University 388702 3249743 -1 -1 -1 Rhadina_sibilatrix__Wood_Warbler__HLrhaSib1__GCA_013400275.1 Rhadina sibilatrix Wood Warbler 2585818 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Phylloscopidae; Rhadina HLrhaSib1 GCA_013400275.1 NCBI ASM1340027v1 Scaffold 2020-07-10 B10K Consortium 38753 335188 -1 -1 -1 Brachypodius_atriceps__black-headed_bulbul__HLbraAtr1__GCA_013398615.1 Brachypodius atriceps black-headed bulbul Pycnonotus atriceps 182895 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Pycnonotidae; Brachypodius HLbraAtr1 GCA_013398615.1 NCBI ASM1339861v1 Scaffold 2020-07-10 B10K Consortium 85408 17537833 -1 -1 -1 Nicator_chloris__Western_nicator__HLnicChl1__GCA_013400495.1 Nicator chloris Western nicator 237433 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Pycnonotidae; Nicator HLnicChl1 GCA_013400495.1 NCBI ASM1340049v1 Scaffold 2020-07-10 B10K Consortium 56498 99492 -1 -1 -1 Pycnonotus_cafer__Red-vented_bulbul__HLpycCafe1__GCA_053477605.1 Pycnonotus cafer Red-vented bulbul Turdus cafer 1003839 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Pycnonotidae; Pycnonotus HLpycCafe1 GCA_053477605.1 NCBI IISERB_BUL_v1 Scaffold 2025-11-14 Indian Institute of Science Education and Research Bhopal 3014782 3045281 NULL NULL NULL Pycnonotus_jocosus__red-whiskered_bulbul__HLpycJoc1__GCA_013400435.1 Pycnonotus jocosus red-whiskered bulbul 182897 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Pycnonotidae; Pycnonotus HLpycJoc1 GCA_013400435.1 NCBI ASM1340043v1 Scaffold 2020-07-10 B10K Consortium 53855 218123 -1 -1 -1 Tricholestes_criniger__Hairy-backed_bulbul__HLtriCrin1__GCA_056825145.1 Tricholestes criniger Hairy-backed bulbul Brachypodius criniger,Hypsipetes criniger 147060 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Pycnonotidae; Tricholestes HLtriCrin1 GCA_056825145.1 NCBI B10K-D-AMNH-2 Scaffold 2026-04-21 Bird 10,000 Genomes (B10K) consortium 66405 3425230 NULL NULL NULL Acrocephalus_arundinaceus__great_reed_warbler__HLacrAru1__GCA_013398685.1 Acrocephalus arundinaceus great reed warbler 39621 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrAru1 GCA_013398685.1 NCBI ASM1339868v1 Scaffold 2020-07-10 B10K Consortium 92557 336459 -1 -1 -1 Acrocephalus_arundinaceus__Great_reed_warbler__HLacrAru2__GCA_021534815.1 Acrocephalus arundinaceus Great reed warbler Turdus arundinaceus 39621 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrAru2 GCA_021534815.1 NCBI ASM2153481v1 Scaffold 2022-01-20 Lund Unviersity 6141892 21448883 -1 -1 -1 Acrocephalus_familiaris_kingi__Nihoa_millerbird__HLacrFamKin1__GCA_022441285.1 Acrocephalus familiaris kingi Nihoa millerbird Tatare familiaris 481813 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrFamKin1 GCA_022441285.1 NCBI AcrFamKingi1.0 Scaffold 2022-03-02 Smithsonian National Zoological Park and Conservation Biology Institute 102588 3600977 -1 -1 -1 Acrocephalus_melanopogon__Moustached_warbler__HLacrMela1__GCA_045783595.1 Acrocephalus melanopogon Moustached warbler Sylvia melanopogon 68470 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrMela1 GCA_045783595.1 NCBI ASM4578359v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 137750 7134027 NULL NULL NULL Acrocephalus_paludicola__aquatic_warbler__HLacrPalu1__GCA_965285925.1 Acrocephalus paludicola aquatic warbler Sylvia paludicola 68471 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrPalu1 GCA_965285925.1 NCBI bAcrPal2.1 Chromosome 2025-07-07 WELLCOME SANGER INSTITUTE 27615808 76810945 NULL NULL NULL Acrocephalus_schoenobaenus__Sedge_warbler__HLacrScho1__GCA_045838425.1 Acrocephalus schoenobaenus Sedge warbler Motacilla schoenobaenus 52609 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrScho1 GCA_045838425.1 NCBI ASM4583842v1 Scaffold 2024-12-09 Bird 10,000 Genomes (B10K) consortium 155472 15450051 NULL NULL NULL Acrocephalus_dumetorum__Blyths_reed_warbler__HLacrDume1__GCA_977968035.1 Acrocephalus dumetorum Blyths reed warbler 68474 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrDume1 GCA_977968035.1 NCBI B10K-D-DBG-42 Scaffold 2026-02-03 B10K project 127522 13741675 NULL NULL NULL Acrocephalus_sechellensis__Seychelles_warbler__HLacrSech1__GCA_977063075.1 Acrocephalus sechellensis Seychelles warbler Ellisia sechellensis 68481 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus HLacrSech1 GCA_977063075.1 NCBI Seychelles_warbler_reference_genome Chromosome 2026-07-04 Seychelles Warbler Project 5298517 75128064 NULL NULL NULL Acrocephalus_scirpaceus_scirpaceus__Eurasian_reed_warbler__HLacrSciSci1__GCA_910950805.1 Acrocephalus scirpaceus scirpaceus Eurasian reed warbler Turdus scirpaceus,Notiocichla scirpacea,Eurasian reed warbler 126889 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Acrocephalus; Acrocephalus scirpaceus HLacrSciSci1 GCA_910950805.1 NCBI RW_assembly Chromosome 2021-08-16 University of Oslo 12742779 74438198 -1 -1 -1 Cettia_cetti__Cettis_warbler__HLcetCet1__GCA_013401135.1 Cettia cetti Cettis warbler Sylvia cetti 68486 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Cettia HLcetCet1 GCA_013401135.1 NCBI ASM1340113v1 Scaffold 2020-07-10 B10K Consortium 62878 64977 -1 -1 -1 Hippolais_icterina__icterine_warbler__HLhipIct1__GCA_013400075.1 Hippolais icterina icterine warbler Hippolais hippolais 68497 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Hippolais HLhipIct1 GCA_013400075.1 NCBI ASM1340007v1 Scaffold 2020-07-10 B10K Consortium 64762 494139 -1 -1 -1 Hylia_prasina__green_hylia__HLhylPra1__GCA_013397195.1 Hylia prasina green hylia 208073 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Hylia HLhylPra1 GCA_013397195.1 NCBI ASM1339719v1 Scaffold 2020-07-10 B10K Consortium 64125 688804 -1 -1 -1 Iduna_caligata__Booted_warbler__HLiduCali1__GCA_045787885.1 Iduna caligata Booted warbler Sylvia caligata,Iduna caligata caligata,Hippolais caligata caligata,Hippolais caligata 1110374 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Iduna HLiduCali1 GCA_045787885.1 NCBI ASM4578788v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 139226 12576810 NULL NULL NULL Sylvietta_virens__Green_crombec__HLsylVir1__GCA_013399515.1 Sylvietta virens Green crombec 208069 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Acrocephalinae; Sylvietta HLsylVir1 GCA_013399515.1 NCBI ASM1339951v1 Scaffold 2020-07-10 B10K Consortium 33668 2514434 -1 -1 -1 Fulvetta_ruficapilla__Spectacled_fulvetta__HLfulRufi1__GCA_042477295.1 Fulvetta ruficapilla Spectacled fulvetta Alcippe ruficapilla,Siva ruficapilla 204793 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Fulvetta HLfulRufi1 GCA_042477295.1 NCBI Fruf_v1 Scaffold 2024-10-02 Kumming Institute of Zoology, Chinese Academy of Sciences 18795193 75915673 NULL NULL NULL Paradoxornis_webbianus__crow_tit__HLparWeb1__GCA_013397395.1 Paradoxornis webbianus crow tit vinous-throated parrotbill,Sinosuthora webbiana,Suthora webbiana 337173 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sinosuthora HLparWeb1 GCA_013397395.1 NCBI ASM1339739v1 Scaffold 2020-07-10 B10K Consortium 78603 970774 -1 -1 -1 Chamaea_fasciata__wrentit__HLchaFas1A__GCF_029207755.1 Chamaea fasciata wrentit Parus fasciatus 190680 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviidae incertae sedis; Chamaea HLchaFas1A GCF_029207755.1 NCBI bChaFas1.0.hap1 Scaffold 2023-03-14 UCLA 4583527 73256386 -1 -1 -1 Chamaea_fasciata__wrentit__HLchaFas1B__GCA_029207785.1 Chamaea fasciata wrentit Parus fasciatus 190680 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviidae incertae sedis; Chamaea HLchaFas1B GCA_029207785.1 NCBI bChaFas1.0.hap2 Scaffold 2023-03-14 UCLA 4583527 73097583 -1 -1 -1 Panurus_biarmicus__Bearded_reedling__HLpanBiar1__GCA_013398035.1 Panurus biarmicus Bearded reedling Parus biarmicus 181101 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviidae incertae sedis; Panurus HLpanBiar1 GCA_013398035.1 NCBI ASM1339803v1 Scaffold 2020-07-10 B10K Consortium 18922 121818 NULL NULL NULL Curruca_cantillans__Eastern_subalpine_warbler__HLcurCant1__GCA_045784985.1 Curruca cantillans Eastern subalpine warbler subalpine warbler,Motacilla cantillans,Sylvia cantillans 208071 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviinae; Curruca HLcurCant1 GCA_045784985.1 NCBI ASM4578498v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 180709 10874106 NULL NULL NULL Curruca_ruppeli__Rueppells_warbler__HLcurRupp1__GCA_045787085.1 Curruca ruppeli Rueppells warbler Sylvia rueppelli,Sylvia ruppeli 216219 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviinae; Curruca HLcurRupp1 GCA_045787085.1 NCBI ASM4578708v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 161249 18940552 NULL NULL NULL Sylvia_atricapilla__blackcap__HLsylAtr1__GCA_009819655.1 Sylvia atricapilla blackcap 48155 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviinae; Sylvia HLsylAtr1 GCA_009819655.1 NCBI bSylAtr1.pri Chromosome 2019-12-31 Vertebrate Genomes Project 7345957 72978054 -1 -1 -1 Sylvia_borin__garden_warbler__HLsylBor1__GCA_014839755.1 Sylvia borin garden warbler Sylvia simplex 73324 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviinae; Sylvia HLsylBor1 GCA_014839755.1 NCBI bSylBor1.pri Chromosome 2020-09-30 Vertebrate Genomes Project 31914676 72750092 -1 -1 -1 Alcippe_poioicephala__Brown-cheeked_fulvetta__HLalcPoio1__GCA_056882765.1 Alcippe poioicephala Brown-cheeked fulvetta Thimalia poioicephala 181645 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Alcippe HLalcPoio1 GCA_056882765.1 NCBI bAlcPoi1.1 Scaffold 2026-04-24 Indian Institute of Science Education and Research Tirupati 1213727 1215165 NULL NULL NULL Cyanoderma_ruficeps__rufous-capped_babbler__HLcyaRuf1__GCA_008694505.1 Cyanoderma ruficeps rufous-capped babbler Stachyridopsis ruficeps,Stachyris ruficeps 181631 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Cyanoderma HLcyaRuf1 GCA_008694505.1 NCBI ASM869450v1 Scaffold 2019-09-25 Academia Sinica 194313 15643638 -1 -1 -1 Erpornis_zantholeuca__White_bellied_erpornis__HLerpZan1__GCA_013400515.1 Erpornis zantholeuca White bellied erpornis 1112836 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Erpornis HLerpZan1 GCA_013400515.1 NCBI ASM1340051v1 Scaffold 2020-07-10 B10K Consortium 45331 176063 -1 -1 -1 Illadopsis_cleaveri__blackcap_illadopsis__HLillCle1__GCA_013399915.1 Illadopsis cleaveri blackcap illadopsis 201329 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Illadopsis HLillCle1 GCA_013399915.1 NCBI ASM1339991v1 Scaffold 2020-07-10 B10K Consortium 45419 377149 -1 -1 -1 Mixornis_gularis__Striped_tit-babbler__HLmixGul1__GCA_003546035.1 Mixornis gularis Striped tit-babbler Macronous gularis,Macronus gularis 1948886 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Mixornis HLmixGul1 GCA_003546035.1 NCBI ASM354603v1 Scaffold 2018-09-11 National University of Singapore 71550 2810030 -1 -1 -1 Pomatorhinus_ruficollis__streak-breasted_scimitar_babbler__HLpomRuf1__GCA_013401195.1 Pomatorhinus ruficollis streak-breasted scimitar babbler 932028 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Pomatorhinus HLpomRuf1 GCA_013401195.1 NCBI ASM1340119v1 Scaffold 2020-07-10 B10K Consortium 60017 1256354 -1 -1 -1 Pteruthius_melanotis__Black_eared_shrike_babbler__HLpteMel1__GCA_013401235.1 Pteruthius melanotis Black eared shrike babbler 357074 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Timaliidae; Pteruthius HLpteMel1 GCA_013401235.1 NCBI ASM1340123v1 Scaffold 2020-07-10 B10K Consortium 34184 1869218 -1 -1 -1 Sterrhoptilus_dennistouni__Golden_crowned_babbler__HLsteDen1__GCA_013397095.1 Sterrhoptilus dennistouni Golden crowned babbler 2585820 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Sterrhoptilus HLsteDen1 GCA_013397095.1 NCBI ASM1339709v1 Scaffold 2020-07-10 B10K Consortium 50778 955539 -1 -1 -1 Zosterops_borbonicus__Reunion_grey_white_eye__HLzosBor1__GCA_007252995.1 Zosterops borbonicus Reunion grey white eye 364589 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Zosterops HLzosBor1 GCA_007252995.1 NCBI ZoBo_15179_v2.0 Scaffold 2019-07-22 University of Montpellier 20903 1810786 -1 -1 -1 Zosterops_hypoxanthus__Bismarck_white_eye__HLzosHyp1__GCA_013399795.1 Zosterops hypoxanthus Bismarck white eye 2485327 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Zosterops HLzosHyp1 GCA_013399795.1 NCBI ASM1339979v1 Scaffold 2020-07-10 B10K Consortium 48044 306037 -1 -1 -1 Zosterops_japonicus__Japanese_white-eye__HLzosJap1__GCA_017612475.1 Zosterops japonicus Japanese white-eye Zosterops japonica 36299 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Zosterops HLzosJap1 GCA_017612475.1 NCBI CCG_JAWE_1.0 Scaffold 2021-03-29 Smithsonian Institution 38076 9685185 -1 -1 -1 Zosterops_lateralis__Silver-eye__HLzosLate2A__GCA_965231275.1 Zosterops lateralis Silver-eye Sylvia lateralis 43581 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Zosterops HLzosLate2A GCA_965231275.1 NCBI bZosLat1.hap1.1 Chromosome 2025-03-28 WELLCOME SANGER INSTITUTE 3151134 73228557 NULL NULL NULL Zosterops_pallidus__pale_white-eye__HLzosPal1__GCA_007556475.1 Zosterops pallidus pale white-eye 43580 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Zosterops HLzosPal1 GCA_007556475.1 NCBI ZoPa_MNHNZO2015-572_v1.0 Scaffold 2019-07-26 University of Montpellier 26333 379821 -1 -1 -1 Zosterops_lateralis_melanops__silver-eye__HLzosLat1__GCA_001281735.1 Zosterops lateralis melanops silver-eye 1220523 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Zosteropidae; Zosterops; Zosterops lateralis HLzosLat1 GCA_001281735.1 NCBI ASM128173v1 Scaffold 2015-09-14 Imperial College London 34514 3581248 -1 -1 -1 Pithys_albifrons_albifrons__White-plumed_antbird__HLpitAlbiAlb1__GCF_047495875.1 Pithys albifrons albifrons White-plumed antbird Pipra albifrons 3385563 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thamnophilidae; Pithys; Pithys albifrons HLpitAlbiAlb1 GCF_047495875.1 NCBI PitAlb_v1 Chromosome 2025-02-07 Louisiana State University 11992177 77071861 NULL NULL NULL Rhegmatorhina_hoffmannsi__white-breasted_antbird__HLrheHof1__GCA_013398505.1 Rhegmatorhina hoffmannsi white-breasted antbird Rhegmatorhina hoffmansi 468512 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thamnophilidae; Rhegmatorhina HLrheHof1 GCA_013398505.1 NCBI ASM1339850v1 Scaffold 2020-07-10 B10K Consortium 73812 11805716 -1 -1 -1 Sakesphorus_luctuosus__Glossy_antshrike__HLsakLuc1__GCA_013396695.1 Sakesphorus luctuosus Glossy antshrike 419690 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thamnophilidae; Sakesphorus HLsakLuc1 GCA_013396695.1 NCBI ASM1339669v1 Scaffold 2020-07-10 B10K Consortium 84116 564384 -1 -1 -1 Willisornis_vidua__Xingu_scale-backed_antbird__HLwilVidu2__GCA_045364795.1 Willisornis vidua Xingu scale-backed antbird Hypocnemis vidua 1566151 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thamnophilidae; Willisornis HLwilVidu2 GCA_045364795.1 NCBI bWilVid1 haplotype 1 Chromosome 2024-12-02 Genomics of Brazilian Biodiversity 4357226 68492996 NULL NULL NULL Willisornis_vidua_nigrigula__Xingu_scale-backed_antbird__HLwilVidNig1__GCA_021164005.1 Willisornis vidua nigrigula Xingu scale-backed antbird Hylophylax poecilonota nigrigula,Hylophylax poecilinota nigrigula,Willisornis poecilinotus nigrigula,Hylophylax poecilinotus nigrigula 1676003 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thamnophilidae; Willisornis; Willisornis vidua HLwilVidNig1 GCA_021164005.1 NCBI ASM2116400v1 Scaffold 2021-12-10 University of Toronto 132574 11614700 -1 -1 -1 Camarhynchus_parvulus__Small_tree_finch__HLcamPar1__GCA_901933205.1 Camarhynchus parvulus Small tree finch 87175 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Camarhynchus HLcamPar1 GCA_901933205.1 NCBI STF_HiC Chromosome 2019-09-06 UPPSALA UNIVERISTY 16035651 70356807 -1 -1 -1 Diglossa_brunneiventris__black-throated_flowerpiercer__HLdigBru1__GCA_019023105.1 Diglossa brunneiventris black-throated flowerpiercer 547948 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Diglossa HLdigBru1 GCA_019023105.1 NCBI LSU_DiBr_2.0 Chromosome 2021-06-24 Louisiana State University 7273401 67281049 -1 -1 -1 Geospiza_fortis__medium_ground-finch__geoFor1__GCF_000277835.1 Geospiza fortis medium ground-finch 48883 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza geoFor1 GCF_000277835.1 NCBI GeoFor_1.0 Scaffold 2012-07-25 Beijing Genomics Institute 30521 5255844 -1 -1 -1 Nesospiza_acunhae__Inaccessible_Island_finch__HLnesAcu1__GCA_013398715.1 Nesospiza acunhae Inaccessible Island finch 381881 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Nesospiza HLnesAcu1 GCA_013398715.1 NCBI ASM1339871v1 Scaffold 2020-07-10 B10K Consortium 38571 1027905 -1 -1 -1 Rhodinocichla_rosea__Rosy_thrush_tanager__HLrhoRos1__GCA_013396575.1 Rhodinocichla rosea Rosy thrush tanager 58203 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Rhodinocichla HLrhoRos1 GCA_013396575.1 NCBI ASM1339657v1 Scaffold 2020-07-10 B10K Consortium 29643 2545584 -1 -1 -1 Sporophila_hypoxantha__tawny-bellied_seedeater__HLspoHyp1__GCA_002167245.1 Sporophila hypoxantha tawny-bellied seedeater 256693 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Sporophila HLspoHyp1 GCA_002167245.1 NCBI SpoHypox2.0 Scaffold 2017-06-05 Cornell University 1043501 7965281 -1 -1 -1 Sporophila_iberaensis__Ibera_seedeater__HLspoIber1__GCA_053841595.1 Sporophila iberaensis Ibera seedeater 2778208 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Sporophila HLspoIber1 GCA_053841595.1 NCBI ASM5384159v1 Contig 2025-12-05 Cornell University 47202461 47202461 NULL NULL NULL Gubernatrix_cristata__Yellow_cardinal__HLgubCris1__GCA_041475435.1 Gubernatrix cristata Yellow cardinal 555261 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Thraupinae; Gubernatrix HLgubCris1 GCA_041475435.1 NCBI Gcri1.0 Contig 2024-08-26 University of Potsdam 26459013 26459013 NULL NULL NULL Catharus_bicknelli__Bicknells_thrush__HLcatBic1__GCA_021437205.1 Catharus bicknelli Bicknells thrush Hylocichla aliciae bicknelli 159580 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Catharus HLcatBic1 GCA_021437205.1 NCBI HU_Cbicknelli_1.0 Scaffold 2022-01-11 Harvard University 28060 982944 -1 -1 -1 Catharus_fuscescens__veery__HLcatFus1__GCA_013398975.1 Catharus fuscescens veery 159581 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Catharus HLcatFus1 GCA_013398975.1 NCBI ASM1339897v1 Scaffold 2020-07-10 B10K Consortium 56061 276328 -1 -1 -1 Catharus_guttatus__Hermit_thrush__HLcatGutt1__GCA_051295615.1 Catharus guttatus Hermit thrush Muscicapa guttata 9185 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Catharus HLcatGutt1 GCA_051295615.1 NCBI bCatGut1_p1.1 Contig 2025-07-11 Canada's national platform for genome sequencing and analysis 1278345 1278345 NULL NULL NULL Catharus_minimus__Gray_cheeked_thrush__HLcatMin1__GCA_021437185.1 Catharus minimus Gray cheeked thrush Turdus minimus 159579 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Catharus HLcatMin1 GCA_021437185.1 NCBI HU_Cminimus_1.0 Scaffold 2022-01-11 Harvard University 38559 1604676 -1 -1 -1 Catharus_ustulatus__Swainsons_thrush__HLcatUst1__GCA_009819885.1 Catharus ustulatus Swainsons thrush 91951 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Catharus HLcatUst1 GCA_009819885.1 NCBI bCatUst1.pri Chromosome 2019-12-31 Vertebrate Genomes Project 4908935 63528738 -1 -1 -1 Erithacus_rubecula__European_robin__HLeriRub1__GCA_903797595.1 Erithacus rubecula European robin robin 37610 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Erithacus HLeriRub1 GCA_903797595.1 NCBI bEriRub2.1 Chromosome 2020-06-27 SC 5585877 46560559 -1 -1 -1 Luscinia_luscinia__Thrush_nightingale__HLlusLusc1__GCA_034336685.1 Luscinia luscinia Thrush nightingale Motacilla luscinia 391696 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Luscinia HLlusLusc1 GCA_034336685.1 NCBI ASM3433668v1 Chromosome 2023-12-26 Institute of Molecular Genetics of the ASCR v.v.i. 18695389 62437632 NULL NULL NULL Luscinia_megarhynchos__Nightingale__HLlusMega1__GCA_034336665.1 Luscinia megarhynchos Nightingale 383689 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Luscinia HLlusMega1 GCA_034336665.1 NCBI ASM3433666v1 Chromosome 2023-12-26 Institute of Molecular Genetics of the ASCR v.v.i. 13437235 61211992 NULL NULL NULL Sialia_sialis__eastern_bluebird__HLsiaSia1__GCA_009812075.1 Sialia sialis eastern bluebird Motacilla sialis 172413 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Sialia HLsiaSia1 GCA_009812075.1 NCBI Ss_LA_1.0 Scaffold 2019-12-31 Louisiana State University 53982 32306702 -1 -1 -1 Turdus_iliacus__Redwing__HLturIlia1__GCA_965287035.1 Turdus iliacus Redwing 411526 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Turdus HLturIlia1 GCA_965287035.1 NCBI bTurIli2.1 Chromosome 2025-06-07 Genoscope CEA 8414000 70769131 NULL NULL NULL Turdus_merula__Blackbird__HLturMeru1__GCA_965287015.2 Turdus merula Blackbird Amsel,Eurasian blackbird 9187 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Turdus HLturMeru1 GCA_965287015.2 NCBI bTurMer3.2 Chromosome 2025-12-05 Genoscope CEA 32937796 71343807 NULL NULL NULL Turdus_migratorius__American_robin__HLturMigr1A__GCA_052324695.1 Turdus migratorius American robin robin 9188 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Turdus HLturMigr1A GCA_052324695.1 NCBI bTurMig1.hap1 Chromosome 2025-08-28 Vertebrate Genomes Project 13640387 68099324 NULL NULL NULL Turdus_philomelos__Song_thrush__HLturPhil1__GCA_965287025.1 Turdus philomelos Song thrush Singdrossel 127946 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Turdus HLturPhil1 GCA_965287025.1 NCBI bTurPhi1.1 Chromosome 2025-06-07 Genoscope CEA 7452025 62560071 NULL NULL NULL Turdus_rufiventris__rufous-bellied_thrush__HLturRuf1__GCA_013186435.1 Turdus rufiventris rufous-bellied thrush 311356 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Turdidae; Turdus HLturRuf1 GCA_013186435.1 NCBI ASM1318643v1 Scaffold 2020-05-28 LNCC 34001 4184613 -1 -1 -1 Empidonax_alnorum__alder_flycatcher__HLempAln1__GCA_023644505.1 Empidonax alnorum alder flycatcher 209618 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Empidonax HLempAln1 GCA_023644505.1 NCBI EAln_1.0 Scaffold 2022-06-02 University of Toronto Scarborough 165784 7733337 -1 -1 -1 Empidonax_traillii__willow_flycatcher__HLempTra1__GCA_003031625.1 Empidonax traillii willow flycatcher 164674 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Empidonax HLempTra1 GCA_003031625.1 NCBI ASM303162v1 Scaffold 2018-04-03 UCLA 86564 895074 -1 -1 -1 Mionectes_macconnelli__McConnells_flycatcher__HLmioMac1__GCA_013397495.1 Mionectes macconnelli McConnells flycatcher Mionectes macconnellii 254557 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Mionectes HLmioMac1 GCA_013397495.1 NCBI ASM1339749v1 Scaffold 2020-07-10 B10K Consortium 72805 1646422 -1 -1 -1 Neopipo_cinnamomea__Cinnamon_manakin__HLneoCin1__GCA_013397415.1 Neopipo cinnamomea Cinnamon manakin 456388 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Neopipo HLneoCin1 GCA_013397415.1 NCBI ASM1339741v1 Scaffold 2020-07-10 B10K Consortium 43146 485965 -1 -1 -1 Onychorhynchus_coronatus__Tropical_royal_flycatcher__HLonyCor1__GCA_013397825.1 Onychorhynchus coronatus Tropical royal flycatcher 360224 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Onychorhynchus HLonyCor1 GCA_013397825.1 NCBI ASM1339782v1 Scaffold 2020-07-10 B10K Consortium 96253 2999088 -1 -1 -1 Pachyramphus_minor__Pink-throated_becard__HLpacMin1__GCA_013397135.1 Pachyramphus minor Pink-throated becard 369605 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Pachyramphus HLpacMin1 GCA_013397135.1 NCBI ASM1339713v1 Scaffold 2020-07-10 B10K Consortium 89585 564837 -1 -1 -1 Pyrocephalus_nanus__Galapagos_flycatcher__HLpyrNan1__GCA_038380795.1 Pyrocephalus nanus Galapagos flycatcher 1853061 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Pyrocephalus HLpyrNan1 GCA_038380795.1 NCBI CAS-CDF_Pyrnan_1.0 Chromosome 2024-04-18 California Academy of Sciences, Charles Darwin Foundation and University of Vienna 17811915 74038366 -1 -1 -1 Pyrocephalus_rubinus__Vermilion_flycatcher__HLpyrRubi1A__GCA_056882965.1 Pyrocephalus rubinus Vermilion flycatcher Muscicapa rubinus 371933 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Pyrocephalus HLpyrRubi1A GCA_056882965.1 NCBI VEFL_149044.hap1 Contig 2026-04-24 Harvard University 6136263 6136263 NULL NULL NULL Sapayoa_aenigma__broad-billed_sapayoa__HLsapAen1__GCA_013398745.1 Sapayoa aenigma broad-billed sapayoa 239371 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Sapayoa HLsapAen1 GCA_013398745.1 NCBI ASM1339874v1 Scaffold 2020-07-10 B10K Consortium 60157 363559 -1 -1 -1 Sayornis_phoebe__Eastern_phoebe__HLsayPhoe1A__GCA_055470965.1 Sayornis phoebe Eastern phoebe Muscicapa phoebe,dusky flycatcher 56315 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Sayornis HLsayPhoe1A GCA_055470965.1 NCBI bSayPho3.hap1 Chromosome 2026-02-24 Vertebrate Genomes Project 18464113 64623597 NULL NULL NULL Tachuris_rubrigastra__Many_colored_rush_tyrant__HLtacRub1__GCA_013396555.1 Tachuris rubrigastra Many colored rush tyrant 495162 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Tachuris HLtacRub1 GCA_013396555.1 NCBI ASM1339655v1 Scaffold 2020-07-10 B10K Consortium 66111 2761092 -1 -1 -1 Tyrannus_savana__Fork-tailed_flycatcher__HLtyrSav1__GCA_013399735.1 Tyrannus savana Fork-tailed flycatcher 137541 Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Tyrannidae; Tyrannus HLtyrSav1 GCA_013399735.1 NCBI ASM1339973v1 Scaffold 2020-07-10 B10K Consortium 72317 436182 -1 -1 -1 Eolophus_roseicapillus__galah__HLeolRos1__GCA_013397615.1 Eolophus roseicapillus galah Eolophus roseicapilla,rose-breasted cockatoo 176039 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Cacatuidae; Eolophus HLeolRos1 GCA_013397615.1 NCBI ASM1339761v1 Scaffold 2020-07-10 B10K Consortium 21735 418393 -1 -1 -1 Cacatua_leadbeateri__Major_Mitchells_cockatoo__HLcacLea1__GCA_010015045.1 Cacatua leadbeateri Major Mitchells cockatoo Lophochroa leadbeateri,pink cockatoo 471713 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Cacatuidae; Lophochroa HLcacLea1 GCA_010015045.1 NCBI ASM1001504v1 Scaffold 2020-01-30 IRIDIAN GENOMES 516623 7891727 -1 -1 -1 Probosciger_aterrimus__palm_cockatoo__HLproAte1__GCA_013397665.1 Probosciger aterrimus palm cockatoo Psittacus aterrimus,Probosciger atterimus,goliath cockatoo 141839 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Cacatuidae; Probosciger HLproAte1 GCA_013397665.1 NCBI ASM1339766v1 Scaffold 2020-07-10 B10K Consortium 32274 198462 -1 -1 -1 Agapornis_fischeri__Fischers_lovebird__HLagaFisc1__GCA_051622115.1 Agapornis fischeri Fischers lovebird 60463 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Agapornis HLagaFisc1 GCA_051622115.1 NCBI AgFisc1.0 Chromosome 2025-07-30 Southwest University 64946157 75117306 NULL NULL NULL Agapornis_lilianae__Lilians_lovebird__HLagaLili1__GCA_035222285.1 Agapornis lilianae Lilians lovebird 60464 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Agapornis HLagaLili1 GCA_035222285.1 NCBI ASM3522228v1 Scaffold 2024-01-08 Iridian Genomes 15867 27332 NULL NULL NULL Agapornis_nigrigenis__black-cheeked_lovebird__HLagaNigr1__GCA_035041115.1 Agapornis nigrigenis black-cheeked lovebird 60465 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Agapornis HLagaNigr1 GCA_035041115.1 NCBI ASM3504111v1 Scaffold 2024-01-03 Iridian Genomes 66169 81463 NULL NULL NULL Agapornis_personatus__Yellow-collared_lovebird__HLagaPers1__GCA_034783155.1 Agapornis personatus Yellow-collared lovebird Agapornis personata 60466 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Agapornis HLagaPers1 GCA_034783155.1 NCBI ASM3478315v1 Scaffold 2023-12-28 Iridian Genomes 15928 27927 NULL NULL NULL Agapornis_roseicollis__peach-faced_lovebird__HLagaRos1__GCA_002631895.1 Agapornis roseicollis peach-faced lovebird rosy-cheeked lovebird,Psittacus roseicollis 60468 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Agapornis HLagaRos1 GCA_002631895.1 NCBI ASM263189v1 Scaffold 2017-10-23 North West University 28585 118346 -1 -1 -1 Amazona_aestiva__blue-fronted_amazon__HLamaAes1__GCA_001420675.1 Amazona aestiva blue-fronted amazon 12930 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Amazona HLamaAes1 GCA_001420675.1 NCBI ASM142067v1 Scaffold 2015-10-30 LNCC 26171 1281105 -1 -1 -1 Amazona_collaria__yellow-billed_parrot__HLamaCol1__GCA_003947215.1 Amazona collaria yellow-billed parrot 241587 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Amazona HLamaCol1 GCA_003947215.1 NCBI ASM394721v1 Scaffold 2018-12-14 Weill Cornell Medicine 208912 13267695 -1 -1 -1 Amazona_guildingii__Saint_Vincent_amazon__HLamaGui1__GCA_013399615.1 Amazona guildingii Saint Vincent amazon 175529 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Amazona HLamaGui1 GCA_013399615.1 NCBI ASM1339961v1 Scaffold 2020-07-10 B10K Consortium 61007 275649 -1 -1 -1 Amazona_ochrocephala__Yellow-crowned_parrot__HLamaOchr1A__GCA_039720435.1 Amazona ochrocephala Yellow-crowned parrot Psittacus ochrocephalus 151761 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Amazona HLamaOchr1A GCA_039720435.1 NCBI bAmaOch1.hap1 Chromosome 2024-05-24 Vertebrate Genomes Project 14879228 92674118 NULL NULL NULL Amazona_vittata__Puerto_Rican_parrot__amaVit1__GCA_000332375.1 Amazona vittata Puerto Rican parrot Psittacus vittatus 241585 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Amazona amaVit1 GCA_000332375.1 NCBI AV1 Scaffold 2013-01-22 Puerto Rican Parrot Genome Project 6904 19239 -1 -1 -1 Anodorhynchus_hyacinthinus__hyacinth_macaw__HLanoHya1__GCA_009936445.1 Anodorhynchus hyacinthinus hyacinth macaw Psittacus hyacinthinus,Anodorhynchus hyancinthus,Anodorhynchus hyacinthus 51900 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Anodorhynchus HLanoHya1 GCA_009936445.1 NCBI ASM993644v1 Scaffold 2020-01-27 IRIDIAN GENOMES 88936 3229032 -1 -1 -1 Ara_ararauna__blue-and-yellow_macaw__HLaraAra1__GCA_010014805.1 Ara ararauna blue-and-yellow macaw blue and gold macaw 9226 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Ara HLaraAra1 GCA_010014805.1 NCBI ASM1001480v1 Scaffold 2020-01-30 IRIDIAN GENOMES 128137 2859019 -1 -1 -1 Ara_ararauna__Blue-and-yellow_macaw__HLaraArar2A__GCA_028858755.1 Ara ararauna Blue-and-yellow macaw Psittacus ararauna,blue and gold macaw 9226 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Ara HLaraArar2A GCA_028858755.1 NCBI bAraAra1.hap1 Chromosome 2023-02-24 Vertebrate Genomes Project 38811057 110438430 NULL NULL NULL Ara_chloropterus__red-and-green_macaw__HLaraChl1__GCA_010014725.1 Ara chloropterus red-and-green macaw green-winged macaw,Ara chloroptera 176013 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Ara HLaraChl1 GCA_010014725.1 NCBI ASM1001472v1 Scaffold 2020-01-30 IRIDIAN GENOMES 1535524 33226762 -1 -1 -1 Ara_glaucogularis__Blue-throated_macaw__HLaraGla2__GCA_013433245.1 Ara glaucogularis Blue-throated macaw Ara caninde,Caninde macaw,blue throated macaw 303304 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Ara HLaraGla2 GCA_013433245.1 NCBI TAMU_Btm_v1.0 Scaffold 2020-07-21 Texas A&M University 11243935 63877199 -1 -1 -1 Ara_militaris__military_macaw__HLaraMil1__GCA_010015965.1 Ara militaris military macaw 57237 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Ara HLaraMil1 GCA_010015965.1 NCBI ASM1001596v1 Scaffold 2020-01-30 IRIDIAN GENOMES 177519 4054913 -1 -1 -1 Ara_rubrogenys__red-fronted_macaw__HLaraRub1__GCA_917880015.2 Ara rubrogenys red-fronted macaw 467030 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Ara HLaraRub1 GCA_917880015.2 NCBI bAraRub1_ORGONE04 Scaffold 2022-01-30 IBE (Institut de Biologia Evolutiva) 46382249 46382249 -1 -1 -1 Aratinga_solstitialis__sun_parakeet__HLaraSol1__GCA_902168055.1 Aratinga solstitialis sun parakeet Psittacus solstitialis,sun conure,Aratinga solstitialis solstitialis 176015 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Aratinga HLaraSol1 GCA_902168055.1 NCBI ARATINGA-SOLSTITIALIS-ASSEMBLY-PRJEB33153 Scaffold 2019-11-14 INSTITUT DE BIOLOGIA EVOLUTIVA (CSIC-UPF) 236229 16980747 -1 -1 -1 Aratinga_weddellii__Weddells_conure__HLaraWed1__GCA_009867205.1 Aratinga weddellii Weddells conure Aratinga weddelli 190661 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Aratinga HLaraWed1 GCA_009867205.1 NCBI ASM986720v1 Scaffold 2020-01-14 IRIDIAN GENOMES 124592 9081201 -1 -1 -1 Cyanoliseus_patagonus__Burrowing_parakeet__HLcyaPata1__GCA_025629865.1 Cyanoliseus patagonus Burrowing parakeet Psittacus patagonus 309862 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Cyanoliseus HLcyaPata1 GCA_025629865.1 NCBI ASM2562986v1 Scaffold 2022-10-08 Iridian Genomes 11117 23079 NULL NULL NULL Diopsittaca_nobilis__Red-shouldered_macaw__HLdioNobi1__GCA_024337085.1 Diopsittaca nobilis Red-shouldered macaw Psittacus nobilis,Ara nobilis 178888 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Diopsittaca HLdioNobi1 GCA_024337085.1 NCBI ASM2433708v1 Scaffold 2022-07-20 Iridian Genomes 20970 31393 NULL NULL NULL Eclectus_roratus__Eclectus_parrot__HLeclRor1__GCA_011763535.1 Eclectus roratus Eclectus parrot Electus roratus,Lorius roratus 176024 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Eclectus HLeclRor1 GCA_011763535.1 NCBI ASM1176353v1 Scaffold 2020-03-27 IRIDIAN GENOMES 86912 3064750 -1 -1 -1 Eupsittula_pertinax__brown-throated_parakeet__HLeupPer1__GCA_011317185.1 Eupsittula pertinax brown-throated parakeet Aratinga pertinax 492513 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Eupsittula HLeupPer1 GCA_011317185.1 NCBI ASM1131718v1 Scaffold 2020-03-16 IRIDIAN GENOMES 70940 9066519 -1 -1 -1 Guaruba_guarouba__Golden_parakeet__HLguaGua1__GCA_011800095.1 Guaruba guarouba Golden parakeet Aratinga guarouba 51906 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Guaruba HLguaGua1 GCA_011800095.1 NCBI ASM1180009v1 Scaffold 2020-03-31 IRIDIAN GENOMES 126760 9320406 -1 -1 -1 Guaruba_guarouba__Golden_parakeet__HLguaGuar2__GCA_045345405.1 Guaruba guarouba Golden parakeet Aratinga guarouba,Psittacus guarouba 51906 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Guaruba HLguaGuar2 GCA_045345405.1 NCBI bGuaGua1 haplotype 1 Chromosome 2024-12-02 Genomics of Brazilian Biodiversity 33341676 109727540 NULL NULL NULL Lathamus_discolor__Swift_parrot__HLlatDis1A__GCF_037157495.1 Lathamus discolor Swift parrot Psittacus discolor 678569 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Lathamus HLlatDis1A GCF_037157495.1 NCBI bLatDis1.hap1 Chromosome 2024-03-15 Vertebrate Genomes Project 19972387 126105786 -1 -1 -1 Lathamus_discolor__Swift_parrot__HLlatDis1B__GCA_037157625.1 Lathamus discolor Swift parrot Psittacus discolor 678569 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Lathamus HLlatDis1B GCA_037157625.1 NCBI bLatDis1.hap2 Chromosome 2024-03-15 Vertebrate Genomes Project 25138706 129024758 -1 -1 -1 Loriculus_galgulus__blue-crowned_hanging_parrot__HLlorGal1__GCA_046563285.1 Loriculus galgulus blue-crowned hanging parrot 60471 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Loriculus HLlorGal1 GCA_046563285.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2020-10-27 27690191 71382169 -1 -1 -1 Myiopsitta_monachus__monk_parakeet__HLmyiMon2__GCA_017639245.1 Myiopsitta monachus monk parakeet Myiopsitta monacha,Psittacus monachus 176066 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Myiopsitta HLmyiMon2 GCA_017639245.1 NCBI MMon_1.0 Chromosome 2021-03-30 University of Vienna 22647286 75716676 -1 -1 -1 Neophema_chrysogaster__Orange-bellied_parrot__HLneoChry1__GCA_047054915.1 Neophema chrysogaster Orange-bellied parrot Psittacus chrysogaster 678581 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Neophema HLneoChry1 GCA_047054915.1 NCBI bNeochry1.pri.20230906 Scaffold 2025-01-23 The University of Sydney 7607663 104053508 NULL NULL NULL Neopsephotus_bourkii__Bourkes_parrot__HLneoBou1__GCF_033783945.1 Neopsephotus bourkii Bourkes parrot Neophema bourkii,Euphema bourkii 309878 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Neopsephotus HLneoBou1 GCF_033783945.1 NCBI CSIRO-AGI_Nbou_v1 Scaffold 2023-11-17 CSIRO Applied Genomics Initiative 4340454 4953402 -1 -1 -1 Nestor_notabilis__Kea__HLnesNot1__GCA_000696875.1 Nestor notabilis Kea Nestor notabilis notabilis 176057 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Nestor HLnesNot1 GCA_000696875.1 NCBI ASM69687v1 Scaffold 2014-06-05 BGI 26546 61475 -1 -1 -1 Pezoporus_flaviventris__Western_Ground_Parrot__HLpezFla1__GCF_033815535.1 Pezoporus flaviventris Western Ground Parrot Pezoporus wallicus flaviventris North, 1911,Pezoporus wallicus flaviventris 889875 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pezoporus HLpezFla1 GCF_033815535.1 NCBI CSIRO_AGI_Pfla_v1 Contig 2023-11-20 CSIRO Applied Genomics Initiative 20284492 20284492 -1 -1 -1 Pezoporus_occidentalis__Night_parrot__HLpezOcc1__GCF_034315485.1 Pezoporus occidentalis Night parrot Geopsittacus occidentalis 407982 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pezoporus HLpezOcc1 GCF_034315485.1 NCBI CSIRO_AGI_Poc_V1 Contig 2023-12-12 CSIRO Applied Genomics Initiative 5079322 5079322 -1 -1 -1 Pezoporus_wallicus__Ground_parrot__HLpezWal1__GCF_028554395.1 Pezoporus wallicus Ground parrot 35540 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pezoporus HLpezWal1 GCF_028554395.1 NCBI APGP_CSIRO_Pwel_v1 Contig 2023-02-08 Rahul Vivek Rane 3815874 3815874 -1 -1 -1 Pionus_senilis__white-capped_parrot__HLpioSen1__GCA_011762725.1 Pionus senilis white-capped parrot white-crowned parrot 30456 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pionus HLpioSen1 GCA_011762725.1 NCBI ASM1176272v1 Scaffold 2020-03-27 IRIDIAN GENOMES 96461 17611112 -1 -1 -1 Platycercus_elegans_elegans__Crimson_rosella__HLplaElegEle1__GCA_051527235.1 Platycercus elegans elegans Crimson rosella Psittacus elegans 3394934 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Platycercus; Platycercus elegans HLplaElegEle1 GCA_051527235.1 NCBI ASM5152723v1 Scaffold 2025-07-24 Australian Research Council 174443 5296303 NULL NULL NULL Psittacula_echo__Mauritius_parakeet__HLpsiEch1__GCA_963264785.1 Psittacula echo Mauritius parakeet Palaeornis echo,Psittacula eques echo 232653 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Psittacula HLpsiEch1 GCA_963264785.1 NCBI bPsiEch3.1 Chromosome 2023-08-20 WELLCOME SANGER INSTITUTE 5922112 106987384 -1 -1 -1 Psittacula_krameri__Rose-ringed_parakeet__HLpsiKra1__GCA_002870145.1 Psittacula krameri Rose-ringed parakeet Ring-necked Parakeet,Psittacus krameri 9228 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Psittacula HLpsiKra1 GCA_002870145.1 NCBI P.krameri1.0 Scaffold 2018-01-09 DICE 23132 1191622 -1 -1 -1 Psittacus_erithacus__grey_parrot__HLpsiEri1__GCA_009867235.1 Psittacus erithacus grey parrot African gray parrot 57247 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Psittacus HLpsiEri1 GCA_009867235.1 NCBI ASM986723v1 Scaffold 2020-01-14 IRIDIAN GENOMES 175666 6797924 -1 -1 -1 Psittacus_timneh__Timneh_parrot__HLpsiTim1__GCA_009867315.1 Psittacus timneh Timneh parrot Psittacus erithacus timneh 1549196 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Psittacus HLpsiTim1 GCA_009867315.1 NCBI ASM986731v1 Scaffold 2020-01-14 IRIDIAN GENOMES 239765 13646571 -1 -1 -1 Pyrrhura_cruentata__Blue-throated_parakeet__HLpyrCru1__GCA_016545565.1 Pyrrhura cruentata Blue-throated parakeet 311901 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pyrrhura HLpyrCru1 GCA_016545565.1 NCBI ASM1654556v1 Scaffold 2021-01-06 IRIDIAN GENOMES 100025 11488115 -1 -1 -1 Pyrrhura_frontalis__maroon-bellied_parakeet__HLpyrFro1__GCA_010014865.1 Pyrrhura frontalis maroon-bellied parakeet 211511 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pyrrhura HLpyrFro1 GCA_010014865.1 NCBI ASM1001486v1 Scaffold 2020-01-30 IRIDIAN GENOMES 86226 18208294 -1 -1 -1 Pyrrhura_griseipectus__Gray-breasted_parakeet__HLpyrGri1__GCA_010014965.1 Pyrrhura griseipectus Gray-breasted parakeet 311890 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pyrrhura HLpyrGri1 GCA_010014965.1 NCBI ASM1001496v1 Scaffold 2020-01-30 IRIDIAN GENOMES 57804 4077983 -1 -1 -1 Pyrrhura_lepida__Pearly_parakeet__HLpyrLep1__GCA_015163975.1 Pyrrhura lepida Pearly parakeet Sittace lepida 311896 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pyrrhura HLpyrLep1 GCA_015163975.1 NCBI ASM1516397v1 Scaffold 2020-11-01 IRIDIAN GENOMES 70170 2531370 -1 -1 -1 Pyrrhura_molinae__Green-cheeked_parakeet__HLpyrMol1__GCA_011763355.1 Pyrrhura molinae Green-cheeked parakeet Conurus molinae 311895 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pyrrhura HLpyrMol1 GCA_011763355.1 NCBI ASM1176335v1 Scaffold 2020-03-27 IRIDIAN GENOMES 82819 4671993 -1 -1 -1 Pyrrhura_perlata__Crimson_bellied_conure__HLpyrPer1__GCA_011763455.1 Pyrrhura perlata Crimson bellied conure 311897 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pyrrhura HLpyrPer1 GCA_011763455.1 NCBI ASM1176345v1 Scaffold 2020-03-27 IRIDIAN GENOMES 101886 3731728 -1 -1 -1 Strigops_habroptila__Kakapo__HLstrHab1__GCA_004027225.1 Strigops habroptila Kakapo Strigops habroptilis,Strigops habroptilus,owl parrot 2489341 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops HLstrHab1 GCA_004027225.1 NCBI bStrHab1_v1.p Chromosome 2019-01-18 Vertebrate Genomes Project 9454100 83147210 -1 -1 -1 Lorius_garrulus__chattering_lory__HLlorGar1__GCA_010014925.1 Lorius garrulus chattering lory 13114 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittaculidae; Loriini; Lorius HLlorGar1 GCA_010014925.1 NCBI ASM1001492v1 Scaffold 2020-01-30 IRIDIAN GENOMES 122760 5420790 -1 -1 -1 Psitteuteles_goldiei__Goldies_lorikeet__HLpsiGol1__GCA_010014875.1 Psitteuteles goldiei Goldies lorikeet 176074 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittaculidae; Loriini; Psitteuteles HLpsiGol1 GCA_010014875.1 NCBI ASM1001487v1 Scaffold 2020-01-30 IRIDIAN GENOMES 486424 19094663 -1 -1 -1 Trichoglossus_moluccanus__rainbow_lorikeet__HLtriMol2__GCA_041053225.1 Trichoglossus moluccanus rainbow lorikeet Trichoglossus haematodus moluccanus 1549204 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittaculidae; Loriini; Trichoglossus HLtriMol2 GCA_041053225.1 https://www.biorxiv.org/content/10.1101/2024.08.30.610474v1 2020-03-02 91449 72769352 -1 -1 -1 Melopsittacus_undulatus__budgerigar__HLmelUnd2__GCA_012275295.1 Melopsittacus undulatus budgerigar 13146 Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittaculidae; Melopsittacus HLmelUnd2 GCA_012275295.1 NCBI bMelUnd1.mat.Z Chromosome 2020-04-13 Vertebrate Genomes Project 16636420 104092594 -1 -1 -1 Buceros_rhinoceros_silvestris__Rhinoceros_hornbill__bucRhi1__GCF_000710305.1 Buceros rhinoceros silvestris Rhinoceros hornbill 175836 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucerotidae; Buceros; Buceros rhinoceros bucRhi1 GCF_000710305.1 NCBI ASM71030v1 Scaffold 2014-06-25 BGI 14587 53203 -1 -1 -1 Tockus_deckeni__Von_der_Deckens_hornbill__HLtocDeck1__GCA_046766075.1 Tockus deckeni Von der Deckens hornbill Buceros deckeni 175819 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucerotidae; Tockus HLtocDeck1 GCA_046766075.1 NCBI ASM4676607v1 Scaffold 2025-01-19 Iridian Genomes 30912 39430287 NULL NULL NULL Bucorvus_abyssinicus__Abyssinian_ground-hornbill__HLbucAby1__GCA_009769605.1 Bucorvus abyssinicus Abyssinian ground-hornbill 153643 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucorvidae; Bucorvus HLbucAby1 GCA_009769605.1 NCBI bBucAby1.pri Chromosome 2019-12-23 Vertebrate Genomes Project 12039478 40274051 -1 -1 -1 Bucorvus_leadbeateri__Southern_ground_hornbill__HLbucLead1__GCA_042477495.1 Bucorvus leadbeateri Southern ground hornbill Buceros leadbeateri,Bucorvus leadbeateri cafer,Bucorvus cafer 155086 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Bucorvidae; Bucorvus HLbucLead1 GCA_042477495.1 NCBI bBucLead Chromosome 2024-10-03 University of the Witwatersrand 574159 40451533 NULL NULL NULL Phoeniculus_purpureus__Green_woodhoopoe__HLphoPurp1__GCA_028565055.1 Phoeniculus purpureus Green woodhoopoe Promerops purpureus 113189 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Phoeniculidae; Phoeniculus HLphoPurp1 GCA_028565055.1 NCBI ASM2856505v1 Scaffold 2023-02-09 Iridian Genomes 21039 18627729 NULL NULL NULL Rhinopomastus_cyanomelas__common_scimitar-bill__HLrhiCya1__GCA_013400115.1 Rhinopomastus cyanomelas common scimitar-bill 113115 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Rhinopomastidae; Rhinopomastus HLrhiCya1 GCA_013400115.1 NCBI ASM1340011v1 Scaffold 2020-07-10 B10K Consortium 114804 415862 -1 -1 -1 Upupa_epops__Eurasian_hoopoe__HLupuEpo1__GCA_013397515.1 Upupa epops Eurasian hoopoe 57439 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Bucerotiformes; Upupidae; Upupa HLupuEpo1 GCA_013397515.1 NCBI ASM1339751v1 Scaffold 2020-07-10 B10K Consortium 49406 227838 -1 -1 -1 Colius_striatus__Speckled_mousebird__HLcolStr2__GCF_028858725.1 Colius striatus Speckled mousebird 57412 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius HLcolStr2 GCF_028858725.1 NCBI bColStr4.1.hap1 Chromosome 2023-02-24 Vertebrate Genomes Project 21931325 89023854 -1 -1 -1 Colius_striatus__speckled_mousebird__colStr1__GCF_000690715.1 Colius striatus speckled mousebird 57412 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius colStr1 GCF_000690715.1 NCBI ASM69071v1 Scaffold 2014-05-13 BGI 25860 46063 -1 -1 -1 Urocolius_indicus__Red_faced_mousebird__HLuroInd1__GCA_013401255.1 Urocolius indicus Red faced mousebird Colius indicus 458196 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Urocolius HLuroInd1 GCA_013401255.1 NCBI ASM1340125v1 Scaffold 2020-07-10 B10K Consortium 94415 261726 -1 -1 -1 Halcyon_senegalensis__Woodland_kingfisher__HLhalSen1__GCA_013397595.1 Halcyon senegalensis Woodland kingfisher 342381 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Alcedinidae; Halcyon HLhalSen1 GCA_013397595.1 NCBI ASM1339759v1 Scaffold 2020-07-10 B10K Consortium 95631 2050318 -1 -1 -1 Todiramphus_cinnamominus__Micronesian_kingfisher__HLtodCinn1__GCA_033439825.1 Todiramphus cinnamominus Micronesian kingfisher Halcyon cinnamomina 1006542 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Alcedinidae; Todiramphus HLtodCinn1 GCA_033439825.1 NCBI ASM3343982v1 Scaffold 2023-11-08 IRIDIAN GENOMES 26668 60279 NULL NULL NULL Todiramphus_chloris_collaris__Collared_kingfisher__HLtodChloCol1__GCA_025345505.1 Todiramphus chloris collaris Collared kingfisher Alcedo chloris,Halcyon chloris,Alcedo collaris 1651259 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Alcedinidae; Todiramphus; Todiramphus chloris HLtodChloCol1 GCA_025345505.1 NCBI ASM2534550v1 Scaffold 2022-09-21 Field Museum of Natural History 148777 17505536 NULL NULL NULL Brachypteracias_leptosomus__short-legged_ground-roller__HLbraLep1__GCA_013401335.1 Brachypteracias leptosomus short-legged ground-roller Colaris leptosomus 135165 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Brachypteraciidae; Brachypteracias HLbraLep1 GCA_013401335.1 NCBI ASM1340133v1 Scaffold 2020-07-10 B10K Consortium 40314 130665 -1 -1 -1 Chloroceryle_aenea__American_pygmy_kingfisher__HLchlAen1__GCA_013399075.1 Chloroceryle aenea American pygmy kingfisher 176938 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Cerylidae; Chloroceryle HLchlAen1 GCA_013399075.1 NCBI ASM1339907v1 Scaffold 2020-07-10 B10K Consortium 34835 324840 -1 -1 -1 Coracias_cyanogaster__Blue-bellied_roller__HLcorCyan1__GCA_033124195.1 Coracias cyanogaster Blue-bellied roller 1547490 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Coraciidae; Coracias HLcorCyan1 GCA_033124195.1 NCBI ASM3312419v1 Scaffold 2023-10-30 Iridian Genomes 21473 58543 NULL NULL NULL Coracias_garrulus__European_roller__HLcorGarr1__GCA_045787065.1 Coracias garrulus European roller Blauracke 188338 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Coraciidae; Coracias HLcorGarr1 GCA_045787065.1 NCBI ASM4578706v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 190116 10306263 NULL NULL NULL Coracias_caudatus__Lilac-breasted_roller__HLcorCaud1__GCA_977969605.1 Coracias caudatus Lilac-breasted roller Coracias caudata 56292 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Coraciidae; Coracias HLcorCaud1 GCA_977969605.1 NCBI B10K-USNM-621688 Scaffold 2026-02-04 B10K project 147870 3298234 NULL NULL NULL Eurystomus_gularis__Blue_throated_roller__HLeurGul1__GCA_013400335.1 Eurystomus gularis Blue throated roller 325343 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Coraciidae; Eurystomus HLeurGul1 GCA_013400335.1 NCBI ASM1340033v1 Scaffold 2020-07-10 B10K Consortium 57880 197888 -1 -1 -1 Merops_apiaster__European_bee-eater__HLmerApia1__GCA_045783135.1 Merops apiaster European bee-eater 265611 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Meropidae; Merops HLmerApia1 GCA_045783135.1 NCBI ASM4578313v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 130845 10431334 NULL NULL NULL Merops_nubicus__carmine_bee-eater__HLmerNub1__GCA_009819595.1 Merops nubicus carmine bee-eater 57421 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Meropidae; Merops HLmerNub1 GCA_009819595.1 NCBI bMerNub1.pri Chromosome 2019-12-31 Vertebrate Genomes Project 12372304 49132790 -1 -1 -1 Baryphthengus_martii__Rufous_motmot__HLbarMar1__GCA_013396935.1 Baryphthengus martii Rufous motmot 176943 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Momotidae; Baryphthengus HLbarMar1 GCA_013396935.1 NCBI ASM1339693v1 Scaffold 2020-07-10 B10K Consortium 70136 225352 -1 -1 -1 Todus_mexicanus__puerto_rican_tody__HLtodMex1__GCA_013389965.1 Todus mexicanus puerto rican tody 135184 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Todidae; Todus HLtodMex1 GCA_013389965.1 NCBI ASM1338996v1 Scaffold 2020-07-06 B10K Consortium 8743 12670 -1 -1 -1 Leptosomus_discolor__Cuckoo_roller__HLlepDisc2B__GCA_034619465.1 Leptosomus discolor Cuckoo roller Cuculus discolor 188344 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Leptosomiformes; Leptosomidae; Leptosomus HLlepDisc2B GCA_034619465.1 NCBI bLepDis1.hap2 Chromosome 2023-12-27 Vertebrate Genomes Project 8826436 82124922 NULL NULL NULL Leptosomus_discolor__cuckoo_roller__lepDis1__GCF_000691785.1 Leptosomus discolor cuckoo roller 188344 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Leptosomiformes; Leptosomidae; Leptosomus lepDis1 GCF_000691785.1 NCBI ASM69178v1 Scaffold 2014-05-23 BGI 24735 62640 -1 -1 -1 Bucco_capensis__collared_puffbird__HLbucCap1__GCA_013396975.1 Bucco capensis collared puffbird 135168 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Bucconidae; Bucco HLbucCap1 GCA_013396975.1 NCBI ASM1339697v1 Scaffold 2020-07-10 B10K Consortium 66968 338467 -1 -1 -1 Galbula_dea__Paradise_jacamar__HLgalDea1__GCA_013399015.1 Galbula dea Paradise jacamar Alcedo dea 1109041 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Galbulidae; Galbula HLgalDea1 GCA_013399015.1 NCBI ASM1339901v1 Scaffold 2020-07-10 B10K Consortium 251170 1175606 -1 -1 -1 Indicator_indicator__Greater_honeyguide__HLindInd2__GCA_027791375.1 Indicator indicator Greater honeyguide Cuculus indicator 1002788 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Indicatoridae; Indicator HLindInd2 GCA_027791375.1 NCBI UM_Iind_1.0 Chromosome 2023-01-13 Brood Parasitic Bird Genomes Consortium 8710530 38137700 -1 -1 -1 Indicator_maculatus__spotted_honeyguide__HLindMac1__GCA_013399975.1 Indicator maculatus spotted honeyguide Indicator maculates 545262 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Indicatoridae; Indicator HLindMac1 GCA_013399975.1 NCBI ASM1339997v1 Scaffold 2020-07-10 B10K Consortium 65219 462551 -1 -1 -1 Pogoniulus_pusillus__Red-fronted_tinkerbird__HLpogPus1__GCA_015220805.1 Pogoniulus pusillus Red-fronted tinkerbird 488313 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Lybiidae; Pogoniulus HLpogPus1 GCA_015220805.1 NCBI bPogPus1.pri Chromosome 2020-11-02 Vertebrate Genomes Project 16792259 33994490 -1 -1 -1 Tricholaema_leucomelas__pied_barbet__HLtriLeu1__GCA_013400475.1 Tricholaema leucomelas pied barbet 240729 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Lybiidae; Tricholaema lacrymosa HLtriLeu1 GCA_013400475.1 NCBI ASM1340047v1 Scaffold 2020-07-10 B10K Consortium 77267 294019 -1 -1 -1 Psilopogon_haemacephalus__Coppersmith_barbet__HLpsiHae1__GCA_013396835.1 Psilopogon haemacephalus Coppersmith barbet 2585815 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Megalaimidae; Psilopogon HLpsiHae1 GCA_013396835.1 NCBI ASM1339683v1 Scaffold 2020-07-10 B10K Consortium 36269 297144 -1 -1 -1 Colaptes_auratus__northern_flicker__HLcolAur1__GCA_015227895.1 Colaptes auratus northern flicker 51355 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Colaptes HLcolAur1 GCA_015227895.1 NCBI Caur_TTU_1.0 Chromosome 2020-11-04 Texas Tech University 826960 43947546 -1 -1 -1 Picoides_pubescens__Downy_woodpecker__HLpicPub2__GCA_014839835.1 Picoides pubescens Downy woodpecker Dendrocopos pubescens,Dryobates pubescens 118200 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates HLpicPub2 GCA_014839835.1 NCBI bDryPub1.pri Chromosome 2020-09-30 Vertebrate Genomes Project 19150283 38715865 -1 -1 -1 Dryobates_pubescens__Downy_woodpecker__HLpicPub3__GCF_014839835.1 Dryobates pubescens Downy woodpecker Picoides pubescens, 1766),Picoides pubescens (Linnaeus 118200 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates HLpicPub3 GCF_014839835.1 NCBI bDryPub1.pri Chromosome 2020-10-02 Vertebrate Genomes Project 19150283 38715865 -1 -1 -1 Dryocopus_martius__Black_woodpecker__HLdryMart1__GCA_045788425.1 Dryocopus martius Black woodpecker Picus martius 187859 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryocopus HLdryMart1 GCA_045788425.1 NCBI ASM4578842v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 171933 6562138 NULL NULL NULL Melanerpes_aurifrons__Golden-fronted_woodpecker__HLmelAur1__GCA_011125475.1 Melanerpes aurifrons Golden-fronted woodpecker 371916 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Melanerpes HLmelAur1 GCA_011125475.1 NCBI OU_Melaur_1 Contig 2020-03-17 University of Oklahoma 16045987 16045987 -1 -1 -1 Melanerpes_formicivorus__Acorn_woodpecker__HLmelFor1__GCF_026170545.1 Melanerpes formicivorus Acorn woodpecker Picus formicivorus 211600 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Melanerpes HLmelFor1 GCF_026170545.1 NCBI bMelFor1.0.p_v2 Scaffold 2022-11-14 UCLA 1471937 12675290 -1 -1 -1 Picus_viridis__Eurasian_green_woodpecker__HLpicVir1__GCA_033816785.1 Picus viridis Eurasian green woodpecker 100825 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Picus HLpicVir1 GCA_033816785.1 NCBI MNHN_PicVir_1.0 Chromosome 2023-11-22 Museum national d'Histoire naturelle 19899906 39164214 -1 -1 -1 Eubucco_bourcierii__red-headed_barbet__HLeubBou1__GCA_013396675.1 Eubucco bourcierii red-headed barbet 91767 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Ramphastidae; Eubucco HLeubBou1 GCA_013396675.1 NCBI ASM1339667v1 Scaffold 2020-07-10 B10K Consortium 26549 208022 -1 -1 -1 Ramphastos_sulfuratus__Keel_billed_toucan__HLramSul1__GCA_013399055.1 Ramphastos sulfuratus Keel billed toucan 322582 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Ramphastidae; Ramphastos HLramSul1 GCA_013399055.1 NCBI ASM1339905v1 Scaffold 2020-07-10 B10K Consortium 38620 85980 -1 -1 -1 Ramphastos_toco__Toco_toucan__HLramToco1__GCA_040967075.1 Ramphastos toco Toco toucan 95723 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Ramphastidae; Ramphastos HLramToco1 GCA_040967075.1 NCBI ASM4096707v1 Scaffold 2024-07-30 Iridian Genomes 10117 32078995 NULL NULL NULL Ramphastos_swainsonii__Chestnut-mandibled_toucan__HLramSwai1__GCA_040967055.1 Ramphastos swainsonii Chestnut-mandibled toucan Ramphastos swainsoni,Ramphastos ambiguus swainsonii 207748 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Ramphastidae; Ramphastos HLramSwai1 GCA_040967055.1 NCBI ASM4096705v1 Scaffold 2024-07-30 Iridian Genomes 11237 35197318 NULL NULL NULL Apaloderma_vittatum__bar-tailed_trogon__apaVit1__GCF_000703405.1 Apaloderma vittatum bar-tailed trogon Apaloderma francisci,Heterotrogon vittatus 57397 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma apaVit1 GCF_000703405.1 NCBI ASM70340v1 Scaffold 2014-06-16 BGI 28882 56673 -1 -1 -1 Trogon_melanurus__black-tailed_trogon__HLtroMel1__GCA_013399275.1 Trogon melanurus black-tailed trogon 56311 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Trogon HLtroMel1 GCA_013399275.1 NCBI ASM1339927v1 Scaffold 2020-07-10 B10K Consortium 51448 600933 -1 -1 -1 Trogon_surrucura__Suruca_trogon__HLtroSur1__GCA_020746105.1 Trogon surrucura Suruca trogon 297711 Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Trogon HLtroSur1 GCA_020746105.1 NCBI bTroSur1.pri.cur Chromosome 2021-11-05 Vertebrate Genomes Project 16237294 82617956 -1 -1 -1 Athene_cunicularia__burrowing_owl__HLathCun1__GCA_003259725.1 Athene cunicularia burrowing owl Speotyto cunicularia 194338 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene HLathCun1 GCA_003259725.1 NCBI athCun1 Scaffold 2018-06-21 Stefan Boerno's shared submissions 64091 42147404 -1 -1 -1 Athene_noctua__Little_owl__HLathNoct1A__GCA_965140245.1 Athene noctua Little owl Strix noctua 126797 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene HLathNoct1A GCA_965140245.1 NCBI bAthNoc1.hap1.1 Chromosome 2025-02-13 WELLCOME SANGER INSTITUTE 4050372 86326089 NULL NULL NULL Bubo_bubo__Eurasian_eagle-owl__HLbubBub1__GCA_010303855.1 Bubo bubo Eurasian eagle-owl Eurasian eagle owl 30461 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Bubo HLbubBub1 GCA_010303855.1 NCBI BubBub1.0 Scaffold 2020-02-04 GEROMICS 37091 8019613 -1 -1 -1 Bubo_scandiacus__Snowy_owl__HLbubSca1__GCA_017315185.1 Bubo scandiacus Snowy owl Strix scandiaca,Nyctea scandiaca 371907 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Bubo HLbubSca1 GCA_017315185.1 NCBI ASM1731518v1 Scaffold 2021-03-09 Canada's Genomic Enterprise 196832 19757310 -1 -1 -1 Ciccaba_nigrolineata__Black_and_white_owl__HLcicNig1__GCA_013396715.1 Ciccaba nigrolineata Black and white owl 1118524 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Ciccaba HLcicNig1 GCA_013396715.1 NCBI ASM1339671v1 Scaffold 2020-07-10 B10K Consortium 52324 419310 -1 -1 -1 Glaucidium_brasilianum__ferruginous_pygmy-owl__HLglaBra1__GCA_013399595.1 Glaucidium brasilianum ferruginous pygmy-owl 78217 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Glaucidium HLglaBra1 GCA_013399595.1 NCBI ASM1339959v1 Scaffold 2020-07-10 B10K Consortium 74988 1600682 -1 -1 -1 Otus_sunia__Oriental_scops-owl__HLotuSun1__GCA_010365825.1 Otus sunia Oriental scops-owl 257818 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Otus HLotuSun1 GCA_010365825.1 NCBI OtuSun1.0 Scaffold 2020-02-04 GEROMICS 52366 18540887 -1 -1 -1 Strix_aluco__Tawny_owl__HLstrAluc1A__GCA_031877795.1 Strix aluco Tawny owl Waldkauz 111821 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Strix HLstrAluc1A GCA_031877795.1 NCBI bStrAlu1.hap1 Chromosome 2023-09-25 Vertebrate Genomes Project 11872084 89389700 NULL NULL NULL Strix_nebulosa__Great_grey_owl__HLstrNebu1__GCA_051313305.1 Strix nebulosa Great grey owl 126836 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Strix HLstrNebu1 GCA_051313305.1 NCBI bStrNeb1_p1.2 Chromosome 2025-07-14 Canada's national platform for genome sequencing and analysis 9243205 63843017 NULL NULL NULL Strix_uralensis__Ural_owl__HLstrUral1__GCF_047716275.1 Strix uralensis Ural owl 36305 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Strix HLstrUral1 GCF_047716275.1 NCBI bStrUra1 Chromosome 2025-02-12 Leibniz Institute for the Analysis of Biodiversity Change LIB, Museum Koenig Bonn 16359274 90173155 NULL NULL NULL Strix_occidentalis_caurina__northern_spotted_owl__HLstrOcc1__GCA_002372975.1 Strix occidentalis caurina northern spotted owl Ciccaba occidentalis,Spotted owl,Syrnium occidentale caurinum,Syrnium occidentale 311401 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Strix; Strix occidentalis HLstrOcc1 GCA_002372975.1 NCBI Soccid_v01 Scaffold 2017-09-26 California Academy of Sciences 159062 3983020 -1 -1 -1 Strix_occidentalis_caurina__northern_spotted_owl__HLstrOccCau2__GCA_002372975.2 Strix occidentalis caurina northern spotted owl Syrnium occidentale caurinum,Syrnium occidentale,Spotted owl,Ciccaba occidentalis 311401 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Strix; Strix occidentalis HLstrOccCau2 GCA_002372975.2 NCBI StrOccCau_2.0 Scaffold 2021-04-12 California Academy of Sciences 172291 20549776 -1 -1 -1 Surnia_ulula__Northern_hawk-owl__HLsurUlul1__GCA_045785065.1 Surnia ulula Northern hawk-owl Strix ulula 69940 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Surnia HLsurUlul1 GCA_045785065.1 NCBI ASM4578506v1 Scaffold 2024-12-06 Bird 10,000 Genomes (B10K) consortium 160991 24509715 NULL NULL NULL Tyto_alba__Barn_owl__HLtytAlb3__GCF_018691265.1 Tyto alba Barn owl Strix alba,Schleiereule 56313 Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto HLtytAlb3 GCF_018691265.1 NCBI T.alba_DEE_v4.0 Scaffold 2021-06-03 University of Lausanne 17955177 36032128 -1 -1 -1 Apteryx_haastii__Great_spotted_kiwi__HLaptHaa1__GCA_003342985.1 Apteryx haastii Great spotted kiwi 8823 Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx HLaptHaa1 GCA_003342985.1 NCBI aptHaa1 Scaffold 2018-07-26 Harvard University 120127 1371329 -1 -1 -1 Apteryx_mantelli__North_Island_brown_kiwi__HLaptMant2A__GCF_036417845.1 Apteryx mantelli North Island brown kiwi 2696672 Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx HLaptMant2A GCF_036417845.1 NCBI bAptMan1.hap1 Chromosome 2024-02-06 Vertebrate Genomes Project 19797665 88095958 NULL NULL NULL Apteryx_owenii__little_spotted_kiwi__HLaptOwe1__GCA_003342965.1 Apteryx owenii little spotted kiwi 8824 Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx HLaptOwe1 GCA_003342965.1 NCBI aptOwe1 Scaffold 2018-07-26 Harvard University 138403 1622467 -1 -1 -1 Apteryx_rowi__Okarito_brown_kiwi__HLaptRow1__GCA_003343035.1 Apteryx rowi Okarito brown kiwi Apteryx rowii,Apteryx australis rowii 308060 Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx HLaptRow1 GCA_003343035.1 NCBI aptRow1 Scaffold 2018-07-26 Harvard University 129376 1672276 -1 -1 -1 Apteryx_mantelli_mantelli__North_Island_brown_kiwi__aptMan1__GCF_001039765.1 Apteryx mantelli mantelli North Island brown kiwi Apteryx australis mantelli 202946 Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli aptMan1 GCF_001039765.1 NCBI AptMant0 Contig 2015-06-21 MPI-EVA 17252 5679020 -1 -1 -1 Casuarius_casuarius__southern_cassowary__HLcasCas1__GCA_003342895.1 Casuarius casuarius southern cassowary Australian cassowary,double-wattled cassowary 8787 Aves; Palaeognathae; Casuariiformes; Casuariidae; Casuarius HLcasCas1 GCA_003342895.1 NCBI casCas1 Scaffold 2018-07-26 Harvard University 165721 3704890 -1 -1 -1 Casuarius_casuarius__southern_cassowary__HLcasCas2__GCA_013396415.1 Casuarius casuarius southern cassowary double-wattled cassowary,Australian cassowary 8787 Aves; Palaeognathae; Casuariiformes; Casuariidae; Casuarius HLcasCas2 GCA_013396415.1 NCBI ASM1339641v1 Scaffold 2020-07-10 B10K Consortium 88589 5669588 -1 -1 -1 Casuarius_unappendiculatus__Northern_cassowary__HLcasUnap1__GCA_048898525.1 Casuarius unappendiculatus Northern cassowary 1740858 Aves; Palaeognathae; Casuariiformes; Casuariidae; Casuarius HLcasUnap1 GCA_048898525.1 NCBI ASM4889852v1 Scaffold 2025-03-25 Iridian Genomes 264 25221492 NULL NULL NULL Dromaius_novaehollandiae__Emu__HLdroNov3__GCF_036370855.1 Dromaius novaehollandiae Emu Casuarius novaehollandiae,Dromaius novae-hollandiae 8790 Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius HLdroNov3 GCF_036370855.1 NCBI bDroNov1.hap1 Chromosome 2024-02-26 Vertebrate Genomes Project 24239989 77929039 -1 -1 -1 Anomalopteryx_didiformis__Little_bush_moa__HLanoDidi1__GCA_006937325.1 Anomalopteryx didiformis Little bush moa Dinornis didiformis 8811 Aves; Palaeognathae; Dinornithiformes; Emeidae; Anomalopteryx HLanoDidi1 GCA_006937325.1 NCBI anoDid_nucDNA_orig Scaffold 2019-07-12 Harvard University 824 3350051 NULL NULL NULL Pterocnemia_pennata__lesser_rhea__HLptePen1__GCA_003342835.1 Pterocnemia pennata lesser rhea Rhea pennata 8795 Aves; Palaeognathae; Rheiformes; Rheidae; Rhea HLptePen1 GCA_003342835.1 NCBI rhePen1 Scaffold 2018-07-26 Harvard University 68142 3903569 -1 -1 -1 Rhea_americana__greater_rhea__HLrheAme1__GCA_003343005.1 Rhea americana greater rhea common rhea 8797 Aves; Palaeognathae; Rheiformes; Rheidae; Rhea HLrheAme1 GCA_003343005.1 NCBI rheAme1 Scaffold 2018-07-26 Harvard University 88762 3949999 -1 -1 -1 Rhea_pennata__Lesser_rhea__HLrhePen1__GCF_028389875.1 Rhea pennata Lesser rhea Pterocnemia pennata 8795 Aves; Palaeognathae; Rheiformes; Rheidae; Rhea HLrhePen1 GCF_028389875.1 NCBI bPtePen1.pri Chromosome 2023-02-06 Vertebrate Genomes Project 19335416 82467789 -1 -1 -1 Struthio_camelus__African_ostrich__HLstrCame2A__GCF_040807025.1 Struthio camelus African ostrich ostrich,Struthio camelus domesticus 8801 Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio HLstrCame2A GCF_040807025.1 NCBI bStrCam1.hap1 Chromosome 2024-07-22 Vertebrate Genomes Project 28829471 84633522 NULL NULL NULL Struthio_camelus_australis__African_ostrich__strCam1__GCF_000698965.1 Struthio camelus australis African ostrich ostrich,Struthio camelus domesticus 441894 Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio; Struthio camelus strCam1 GCF_000698965.1 NCBI ASM69896v1 Scaffold 2014-06-06 BGI 34997 3593425 -1 -1 -1 Crypturellus_cinnamomeus__Thicket_tinamou__HLcryCin1__GCA_003342915.1 Crypturellus cinnamomeus Thicket tinamou 889801 Aves; Palaeognathae; Tinamiformes; Tinamidae; Crypturellus HLcryCin1 GCA_003342915.1 NCBI cryCin1 Scaffold 2018-07-26 Harvard University 60620 2401919 -1 -1 -1 Crypturellus_soui__Little_tinamou__HLcrySou1__GCA_013389845.1 Crypturellus soui Little tinamou 458187 Aves; Palaeognathae; Tinamiformes; Tinamidae; Crypturellus HLcrySou1 GCA_013389845.1 NCBI ASM1338984v1 Scaffold 2020-07-06 B10K Consortium 79009 846765 -1 -1 -1 Crypturellus_undulatus__Undulated_tinamou__HLcryUnd1__GCA_013389825.1 Crypturellus undulatus Undulated tinamou 48396 Aves; Palaeognathae; Tinamiformes; Tinamidae; Crypturellus HLcryUnd1 GCA_013389825.1 NCBI ASM1338982v1 Scaffold 2020-07-06 B10K Consortium 99502 387774 -1 -1 -1 Eudromia_elegans__elegant_crested-tinamou__HLeudEle1__GCA_003342815.1 Eudromia elegans elegant crested-tinamou 8805 Aves; Palaeognathae; Tinamiformes; Tinamidae; Eudromia HLeudEle1 GCA_003342815.1 NCBI eudEle1 Scaffold 2018-07-26 Harvard University 126242 3261870 -1 -1 -1 Eudromia_elegans__Elegant_crested-tinamou__HLeudEleg2A__GCA_047922985.1 Eudromia elegans Elegant crested-tinamou 8805 Aves; Palaeognathae; Tinamiformes; Tinamidae; Eudromia HLeudEleg2A GCA_047922985.1 NCBI bEudEle1_v1.hap1 Chromosome 2025-02-20 University of Copenhagen 11629215 66803183 NULL NULL NULL Nothocercus_julius__Tawny_breasted_tinamou__HLnotJul1__GCA_013398735.1 Nothocercus julius Tawny breasted tinamou 2585813 Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothocercus HLnotJul1 GCA_013398735.1 NCBI ASM1339873v1 Scaffold 2020-07-10 B10K Consortium 37646 4059565 -1 -1 -1 Nothocercus_nigrocapillus__Hooded_tinamou__HLnotNig1__GCA_013398345.1 Nothocercus nigrocapillus Hooded tinamou 1977171 Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothocercus HLnotNig1 GCA_013398345.1 NCBI ASM1339834v1 Scaffold 2020-07-10 B10K Consortium 31010 2648942 -1 -1 -1 Nothoprocta_ornata__Ornate_tinamou__HLnotOrn1__GCA_013398335.1 Nothoprocta ornata Ornate tinamou 83376 Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta HLnotOrn1 GCA_013398335.1 NCBI ASM1339833v1 Scaffold 2020-07-10 B10K Consortium 47308 3788443 -1 -1 -1 Nothoprocta_pentlandii__Andean_tinamou__HLnotPen1__GCA_013398315.1 Nothoprocta pentlandii Andean tinamou 2585814 Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta HLnotPen1 GCA_013398315.1 NCBI ASM1339831v1 Scaffold 2020-07-10 B10K Consortium 45203 1104275 -1 -1 -1 Nothoprocta_perdicaria__Chilean_tinamou__HLnotPer1__GCA_003342845.1 Nothoprocta perdicaria Chilean tinamou 30464 Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta HLnotPer1 GCA_003342845.1 NCBI notPer1 Scaffold 2018-07-26 Harvard University 95599 3369196 -1 -1 -1 Nothura_maculosa__Spotted_nothura__HLnotMacu1__GCA_032353885.1 Nothura maculosa Spotted nothura Tinamus maculosus 555279 Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothura HLnotMacu1 GCA_032353885.1 NCBI ASM3235388v1 Scaffold 2023-10-04 Iridian Genomes 10868 2524321 NULL NULL NULL Tinamus_guttatus__white-throated_tinamou__tinGut2__GCF_000705375.1 Tinamus guttatus white-throated tinamou 94827 Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus tinGut2 GCF_000705375.1 NCBI ASM70537v2 Scaffold 2014-08-05 BGI 29773 246268 -1 -1 -1 Ornithorhynchus_anatinus__platypus__HLornAna4__GCF_004115215.2 Ornithorhynchus anatinus platypus duck-billed platypus,Platypus anatinus,duckbill platypus 9258 Mammalia; Prototheria; Monotremata; Ornithorhynchidae; Ornithorhynchus HLornAna4 GCF_004115215.2 NCBI mOrnAna1.pri.v4 Chromosome 2020-11-06 Vertebrate Genomes Project 15146802 83338043 -1 -1 -1 Tachyglossus_aculeatus__Australian_echidna__HLtacAcu2__GCF_015852505.1 Tachyglossus aculeatus Australian echidna Myrmecophaga aculeata,short-beaked echidna 9261 Mammalia; Prototheria; Monotremata; Tachyglossidae; Tachyglossus HLtacAcu2 GCF_015852505.1 NCBI mTacAcu1.pri Chromosome 2020-12-09 Vertebrate Genomes Project 19859057 63379719 -1 -1 -1 Amblysomus_hottentotus__Hottentot_golden_mole__HLambHott1A__GCA_054824725.1 Amblysomus hottentotus Hottentot golden mole Sorex hottentotus 9391 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Chrysochloridae; Amblysominae; Amblysomus HLambHott1A GCA_054824725.1 NCBI mAmbHot1.hap1 Scaffold 2026-01-29 Vertebrate Genomes Project 59459156 96331173 14995 186 15 Chrysochloris_asiatica__Cape_golden_mole__chrAsi1__GCF_000296735.1 Chrysochloris asiatica Cape golden mole 185453 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Chrysochloridae; Chrysochlorinae; Chrysochloris chrAsi1 GCF_000296735.1 NCBI ChrAsi1.0 Scaffold 2012-09-19 Broad Institute 19631 13470186 14644 347 205 Nesogale_talazaci__Talazacs_shrew_tenrec__HLmicTal1__GCA_004026705.1 Nesogale talazaci Talazacs shrew tenrec Microgale talazaci 176115 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Tenrecidae; Oryzorictinae; Nesogale HLmicTal1 GCA_004026705.1 NCBI MicTal_v1_BIUU Scaffold 2019-01-16 Broad Institute 56946 65143 11202 1075 2919 Echinops_telfairi__small_Madagascar_hedgehog__echTel2__GCF_000313985.1 Echinops telfairi small Madagascar hedgehog Echinops telfairii,lesser hedgehog tenrec 9371 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Tenrecidae; Tenrecinae; Echinops echTel2 GCF_000313985.1 NCBI EchTel2.0 Scaffold 2012-11-28 Broad Institute 20428 45764842 13649 739 808 Tenrec_ecaudatus__Tailless_tenrec__HLtenEca1A Tenrec ecaudatus Tailless tenrec tail-less tenrec 94439 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Tenrecidae; Tenrecinae; Tenrec HLtenEca1A TBG Hillerlab, Fauna TBG Hillerlab, Fauna 2023-09-02 54617000 133279229 14883 270 43 Tenrec_ecaudatus__Tailless_tenrec__HLtenEca1B Tenrec ecaudatus Tailless tenrec tail-less tenrec 94439 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Tenrecidae; Tenrecinae; Tenrec HLtenEca1B TBG Hillerlab, Fauna TBG Hillerlab, Fauna 2023-09-02 71825797 156487869 14355 281 560 Tenrec_ecaudatus__Tailless_tenrec__HLtenEcau2A__GCF_050624435.1 Tenrec ecaudatus Tailless tenrec Erinaceus ecaudatus,tail-less tenrec 94439 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Tenrecidae; Tenrecinae; Tenrec HLtenEcau2A GCF_050624435.1 NCBI mTenEca1.hap1 Chromosome 2025-05-30 Vertebrate Genomes Project 41601014 163958880 14758 372 66 Tenrec_ecaudatus__Tailless_tenrec__HLtenEcau2B__GCA_050624465.1 Tenrec ecaudatus Tailless tenrec Erinaceus ecaudatus,tail-less tenrec 94439 Mammalia; Theria; Eutheria; Afrotheria; Afrosoricida; Tenrecidae; Tenrecinae; Tenrec HLtenEcau2B GCA_050624465.1 NCBI mTenEca1.hap2 Chromosome 2025-05-30 Vertebrate Genomes Project 54742630 165248668 14036 487 673 Heterohyrax_brucei__yellow-spotted_hyrax__HLhetBru2__GCA_028571685.1 Heterohyrax brucei yellow-spotted hyrax Hyrax brucei 77598 Mammalia; Theria; Eutheria; Afrotheria; Hyracoidea; Procaviidae; Heterohyrax HLhetBru2 GCA_028571685.1 NCBI mHetBru1.pri Chromosome 2023-02-10 Vertebrate Genomes Project 78495281 139648372 15034 158 4 Procavia_capensis__Cape_rock_hyrax__HLproCap3__GCA_004026925.2 Procavia capensis Cape rock hyrax large-toothed rock hyrax,rock hyrax,Cape hyrax,rock dassie 9813 Mammalia; Theria; Eutheria; Afrotheria; Hyracoidea; Procaviidae; Procavia HLproCap3 GCA_004026925.2 NCBI ProCapCap_v2_BIUU_UCD Scaffold 2019-07-15 Broad Institute 38095 9071062 14719 233 244 Procavia_capensis__Cape_rock_hyrax__HLproCap4 Procavia capensis Cape rock hyrax large-toothed rock hyrax,Cape hyrax,rock dassie,rock hyrax 9813 Mammalia; Theria; Eutheria; Afrotheria; Hyracoidea; Procaviidae; Procavia HLproCap4 DNA Zoo Consortium DNA Zoo Consortium 2021-03-05 29499 133724184 14365 442 389 Elephantulus_edwardii__Cape_elephant_shrew__eleEdw1__GCF_000299155.1 Elephantulus edwardii Cape elephant shrew Cape long-eared elephant shrew 28737 Mammalia; Theria; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Elephantulus eleEdw1 GCF_000299155.1 NCBI EleEdw1.0 Scaffold 2012-10-10 Broad Institute 24219 15011382 14302 567 327 Rhynchocyon_petersi__Black_and_rufous_elephant_shrew__HLrhyPet1A__GCA_043290085.1 Rhynchocyon petersi Black and rufous elephant shrew black and rufous sengi 320637 Mammalia; Theria; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Rhynchocyon HLrhyPet1A GCA_043290085.1 NCBI mRhyPet1.hap1 Chromosome 2024-10-17 Vertebrate Genomes Project 13617243 521973465 14848 302 46 Rhynchocyon_petersi__Black_and_rufous_elephant_shrew__HLrhyPet1B__GCA_043290065.1 Rhynchocyon petersi Black and rufous elephant shrew black and rufous sengi 320637 Mammalia; Theria; Eutheria; Afrotheria; Macroscelidea; Macroscelididae; Rhynchocyon HLrhyPet1B GCA_043290065.1 NCBI mRhyPet1.hap2 Chromosome 2024-10-17 Vertebrate Genomes Project 13791435 546604020 14364 262 570 Elephas_maximus_indicus__Asiatic_elephant__HLeleMax2__GCA_024166365.1 Elephas maximus indicus Asiatic elephant Indian elephant,Asian elephant 99487 Mammalia; Theria; Eutheria; Afrotheria; Proboscidea; Elephantidae; Elephas; Elephas maximus HLeleMax2 GCA_024166365.1 NCBI mEleMax1 primary haplotype Chromosome 2022-07-06 Vertebrate Genomes Project 87987108 127432672 15169 26 1 Elephas_maximus_indicus__Asiatic_elephant__HLeleMaxInd3A__GCF_024166365.1 Elephas maximus indicus Asiatic elephant Indian elephant,Asian elephant 99487 Mammalia; Theria; Eutheria; Afrotheria; Proboscidea; Elephantidae; Elephas; Elephas maximus HLeleMaxInd3A GCF_024166365.1 NCBI mEleMax1 primary haplotype Chromosome 2022-07-06 Vertebrate Genomes Project 87987108 127432672 15171 24 1 Loxodonta_africana__African_savanna_elephant__HLloxAfr5A__GCA_030014295.1 Loxodonta africana African savanna elephant African bush elephant,Elephas africanus,Loxodonta africana africana,African savannah elephant 9785 Mammalia; Theria; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta HLloxAfr5A GCA_030014295.1 NCBI mLoxAfr1.hap2 Chromosome 2023-05-16 Vertebrate Genomes Project 82653632 119600562 15167 24 5 Loxodonta_africana__African_savanna_elephant__HLloxAfr5B__GCA_030020305.1 Loxodonta africana African savanna elephant Elephas africanus,African savannah elephant,Loxodonta africana africana,African bush elephant 9785 Mammalia; Theria; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta HLloxAfr5B GCA_030020305.1 NCBI mLoxAfr1.hap1 Scaffold 2023-05-15 Vertebrate Genomes Project 75907863 116142568 14954 46 196 Dugong_dugon__dugong__HLdugDug1__GCA_015147995.1 Dugong dugon dugong 29137 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong HLdugDug1 GCA_015147995.1 NCBI D_dugong_scaffold_01 Scaffold 2020-08-31 Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies 19047 31096 13361 366 1469 Dugong_dugon__dugong__HLdugDug2 Dugong dugon dugong 29137 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong HLdugDug2 PMID 35119923 PMID 35119923 2022-02-24 149650 3110431 13119 1244 833 Dugong_dugon__Dugong__HLdugDugo3A__GCA_030035585.1 Dugong dugon Dugong Trichechus dugon MÀƒÆ’À‚1/4ller, 1776 29137 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Dugongidae; Dugong HLdugDugo3A GCA_030035585.1 NCBI mDugDug1.hap1 Chromosome 2023-05-18 Vertebrate Genomes Project 57632671 140670990 15082 105 9 Hydrodamalis_gigas__Stellers_sea_cow__HLhydGig1__GCA_013391785.1 Hydrodamalis gigas Stellers sea cow 63631 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Dugongidae; Hydrodamalis HLhydGig1 GCA_013391785.1 NCBI H_Gigas_1.0 Scaffold 2020-07-08 National Research Center Kurchatov Institute 1345 1430 2217 3722 9257 Trichechus_inunguis__Amazon_manatee__HLtriInu1A__GCA_046562895.1 Trichechus inunguis Amazon manatee Manatus inunguis,Amazonian manatee,Brazilian manatee 9777 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus HLtriInu1A GCA_046562895.1 NCBI mTriInu1 haplotype 2 Chromosome 2025-01-08 Genomics of Brazilian Biodiversity 25109643 123530250 15089 92 15 Trichechus_inunguis__Amazon_manatee__HLtriInu1B__GCA_046562985.1 Trichechus inunguis Amazon manatee Manatus inunguis,Brazilian manatee,Amazonian manatee 9777 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus HLtriInu1B GCA_046562985.1 NCBI mTriInu1 haplotype 1 Chromosome 2025-01-08 Genomics of Brazilian Biodiversity 16297374 121225153 14378 291 527 Trichechus_manatus__West_Indian_manatee__HLtriManLat2 Trichechus manatus West Indian manatee 9778 Mammalia; Theria; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus HLtriManLat2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-07 33836 143724118 14553 338 305 Orycteropus_afer__Aardvark__HLoryAfer3A__GCA_054668785.1 Orycteropus afer Aardvark Manis afer 9818 Mammalia; Theria; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus HLoryAfer3A GCA_054668785.1 NCBI mOryAfe1.hap1 Chromosome 2026-01-23 Vertebrate Genomes Project 166734673 655437740 15060 121 15 Orycteropus_afer_afer__aardvark__HLoryAfeAfe2 Orycteropus afer afer aardvark 1230840 Mammalia; Theria; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus; Orycteropus afer HLoryAfeAfe2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-02 11933 644001617 14457 349 390 Cynocephalus_volans__Philippine_flying_lemur__HLcynVol1__GCA_027409185.1 Cynocephalus volans Philippine flying lemur Lemur volans 110931 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Cynocephalus HLcynVol1 GCA_027409185.1 NCBI mCynVol1.pri Chromosome 2022-12-28 Vertebrate Genomes Project 69195939 165781880 15013 174 9 Galeopterus_variegatus__Sunda_flying_lemur__HLgalVar2__GCA_004027255.2 Galeopterus variegatus Sunda flying lemur Cynocephalus variegatus,Malayan flying lemur 482537 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus HLgalVar2 GCA_004027255.2 NCBI GalVar_v2_BIUU_UCD Scaffold 2019-07-15 Broad Institute 34666 7885395 14621 310 265 Lepus_americanus__snowshoe_hare__HLlepAme1__GCA_004026855.1 Lepus americanus snowshoe hare 48086 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepAme1 GCA_004026855.1 NCBI LepAme_v1_BIUU Scaffold 2019-01-16 Broad Institute 15057 16725 11150 1267 2779 Lepus_capensis__Brown_hare__HLlepCap1__GCA_042027585.1 Lepus capensis Brown hare Cape hare 9981 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepCap1 GCA_042027585.1 NCBI NW_LepCap_1.0 Chromosome 2024-09-19 Northwest A & F University 30546000 124437717 14948 189 59 Lepus_castroviejoi__Broom_Hare__HLlepCast1__GCA_978442995.1 Lepus castroviejoi Broom Hare 187398 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepCast1 GCA_978442995.1 NCBI mLepCas1.Hap1.1 Chromosome 2026-02-10 University of Florence 58008274 137255412 14844 240 112 Lepus_europaeus__European_hare__HLlepEur1__GCF_033115175.1 Lepus europaeus European hare Lepus capensis europaeus 9983 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepEur1 GCF_033115175.1 NCBI mLepTim1.pri Chromosome 2023-10-31 University of Eastern Finland 43409466 125776599 14759 378 59 Lepus_oiostolus__Woolly_hare__HLlepOio1__GCA_036325905.1 Lepus oiostolus Woolly hare 112018 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepOio1 GCA_036325905.1 NCBI CXZ Chromosome 2024-02-05 Qinghai University 58464897 137608147 14514 645 37 Lepus_timidus__Mountain_hare__HLlepTim1__GCA_009760805.1 Lepus timidus Mountain hare Lepus tanaiticus 62621 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepTim1 GCA_009760805.1 NCBI CIBIO-ISEM_LeTim_1.1 Chromosome 2019-12-17 CIBIO 18458 116271063 12512 1265 1419 Lepus_timidus__Mountain_hare__HLlepTimi2__GCA_040893245.2 Lepus timidus Mountain hare Lepus tanaiticus 62621 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepTimi2 GCA_040893245.2 NCBI mLepTim1.1_pri Chromosome 2024-07-26 University of Eastern Finland 4885811 125755317 14341 722 133 Lepus_tolai__Tolai_hare__HLlepTola1__GCA_051942805.1 Lepus tolai Tolai hare Lepus capensis tolai 283924 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepTola1 GCA_051942805.1 NCBI ASM5194280v1 Chromosome 2025-08-12 Institute of Zoology, Chinese Academy of Sciences 134987039 134987039 14957 206 33 Lepus_townsendii__White-tailed_jackrabbit__HLlepTow1__GCA_029532125.1 Lepus townsendii White-tailed jackrabbit 63225 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepTow1 GCA_029532125.1 NCBI Ltowsendii_DMNS18807_Prim_1.0 Scaffold 2023-03-31 CIBIO, University of Porto 98462 46990746 14200 549 447 Lepus_yarkandensis__Yarkand_hare__HLlepYar1__GCA_047496845.1 Lepus yarkandensis Yarkand hare 301146 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepYar1 GCA_047496845.1 NCBI LepYark_1.0 Complete Genome 2025-02-06 xinjiang university 126863262 126863262 14272 555 369 Lepus_americanus__Snowshoe_hare__HLlepAmer2__GCA_055471105.1 Lepus americanus Snowshoe hare 48086 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Lepus HLlepAmer2 GCA_055471105.1 NCBI ASM5547110v1 Chromosome 2026-02-24 Texas A&M University 52566763 131013113 14930 220 46 Oryctolagus_cuniculus__Rabbit__HLoryCuni5__GCF_964237555.1 Oryctolagus cuniculus Rabbit domestic rabbit,Lepus cuniculus,New Zealand rabbit,Japanese white rabbit,European rabbit,rabbits 9986 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus HLoryCuni5 GCF_964237555.1 NCBI mOryCun1.1 Chromosome 2024-08-31 WELLCOME SANGER INSTITUTE 2030165 144279705 14917 224 55 Oryctolagus_cuniculus__Rabbit__HLoryCuni6__GCA_051225735.1 Oryctolagus cuniculus Rabbit domestic rabbit,New Zealand rabbit,rabbits,Japanese white rabbit,Lepus cuniculus,European rabbit 9986 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus HLoryCuni6 GCA_051225735.1 NCBI ASM5122573v1 Chromosome 2025-07-07 Fujian University of Traditional Chinese Medicine 138122305 148896876 14983 182 31 Oryctolagus_cuniculus_cuniculus__rabbit__HLoryCunCun4__GCA_013371645.1 Oryctolagus cuniculus cuniculus rabbit European rabbit,rabbits,domestic rabbit,Lepus cuniculus,Japanese white rabbit,New Zealand rabbit 568996 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus; Oryctolagus cuniculus HLoryCunCun4 GCA_013371645.1 NCBI OryCun3.0 Chromosome 2020-06-22 Uppsala University 1879078 140390130 13608 1504 84 Sylvilagus_bachmani__brush_rabbit__HLsylBac1 Sylvilagus bachmani brush rabbit 365149 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Sylvilagus HLsylBac1 DNA Zoo Consortium DNA Zoo Consortium 2020-10-18 57936 110456461 14067 507 622 Sylvilagus_floridanus__eastern_cottontail__HLsylFlo1__GCA_949820135.1 Sylvilagus floridanus eastern cottontail Lepus sylvaticus floridanus 9988 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Sylvilagus HLsylFlo1 GCA_949820135.1 NCBI mSylFlo1.10 Chromosome 2023-04-19 Wellcome Sanger Institute 34907720 129271642 14807 339 50 Ochotona_argentata__Helan_Shan_pika__HLochArge1__GCA_051943095.1 Ochotona argentata Helan Shan pika Ochotona alpina argentata 1881634 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona HLochArge1 GCA_051943095.1 NCBI ASM5194309v1 Scaffold 2025-08-12 Inner Mongolia University 33442122 33442122 14810 321 65 Ochotona_curzoniae__black-lipped_pika__HLochCur1__GCF_017591425.1 Ochotona curzoniae black-lipped pika Ochotona curzonae,plateau pika 130825 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona HLochCur1 GCF_017591425.1 NCBI NIBS_Ocur_1.0 Scaffold 2021-03-26 National Institute of Biological Sciences, Beijing 29562832 33876933 14838 291 67 Ochotona_princeps__American_pika__HLochPri4__GCF_030435755.1 Ochotona princeps American pika Arvicola princeps,southern American pika 9978 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona HLochPri4 GCF_030435755.1 NCBI mOchPri1.hap1 Chromosome 2023-07-13 Vertebrate Genomes Project 12191025 73962893 14761 363 72 Anomalurus_derbianus__Lord_Derbys_scaly-tailed_squirrel__HLanoDerb1A__GCA_058744715.1 Anomalurus derbianus Lord Derbys scaly-tailed squirrel 2022012 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Anomaluromorpha; Anomaluridae; Anomalurus HLanoDerb1A GCA_058744715.1 NCBI mAnoDer1.hap1 Chromosome 2026-07-02 Vertebrate Genomes Project 94461626 112379849 15025 157 14 Pedetes_capensis__springhare__HLpedCap1__GCA_007922755.1 Pedetes capensis springhare springhaas,spring hare 10023 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Anomaluromorpha; Pedetidae; Pedetes HLpedCap1 GCA_007922755.1 NCBI PedCap_v1_BIUU Scaffold 2019-08-08 Broad Institute 54009 74432 14206 362 628 Castor_canadensis__American_beaver__HLcasCan3 Castor canadensis American beaver 51338 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor HLcasCan3 DNA Zoo Consortium DNA Zoo Consortium 2020-07-09 266367 136673807 12506 2192 498 Castor_canadensis__American_beaver__HLcasCana4A__GCA_047511655.2 Castor canadensis American beaver 51338 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor HLcasCana4A GCA_047511655.2 NCBI mCasCan1.hap1v2 Chromosome 2025-02-10 Vertebrate Genomes Project 59379167 158968201 15015 169 12 Castor_canadensis__American_beaver__HLcasCana5__GCA_001984765.2 Castor canadensis American beaver 51338 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor HLcasCana5 GCA_001984765.2 NCBI ASM198476v2 Chromosome 2026-01-29 Hospital for Sick Children 144908913 158004004 15030 161 5 Castor_fiber__Eurasian_beaver__HLcasFibe1__GCA_977036005.1 Castor fiber Eurasian beaver 10185 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor HLcasFibe1 GCA_977036005.1 NCBI mCasFib1.1 Chromosome 2025-11-13 WELLCOME SANGER INSTITUTE 48519000 144294294 14912 248 36 Geomys_bursarius__Plains_pocket_gopher__HLgeoBur1__GCA_040207655.1 Geomys bursarius Plains pocket gopher Mus bursarius 27682 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Geomyidae; Geomys HLgeoBur1 GCA_040207655.1 NCBI GeBurs Scaffold 2024-06-17 Texas Tech University 11757861 13070852 14710 375 111 Thomomys_bottae__Bottas_pocket_gopher__HLthoBot2A__GCA_031878675.1 Thomomys bottae Bottas pocket gopher 10013 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Geomyidae; Thomomys HLthoBot2A GCA_031878675.1 NCBI mThoBot2.hap1 Chromosome 2023-09-25 Vertebrate Genomes Project 5921125 64418693 14615 494 87 Thomomys_bottae__Bottas_pocket_gopher__HLthoBot2B__GCA_031878665.1 Thomomys bottae Bottas pocket gopher 10013 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Geomyidae; Thomomys HLthoBot2B GCA_031878665.1 NCBI mThoBot2.hap2 Chromosome 2023-09-25 Vertebrate Genomes Project 6183328 61325068 14174 427 595 Dipodomys_merriami__Merriams_kangaroo_rat__HLdipMer1__GCA_024711535.1 Dipodomys merriami Merriams kangaroo rat 94247 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys HLdipMer1 GCA_024711535.1 NCBI mDipMer1.0.p Scaffold 2022-08-18 UCLA 7443915 13535215 14791 339 66 Dipodomys_spectabilis__banner-tailed_kangaroo_rat__HLdipSpe1__GCF_019054845.1 Dipodomys spectabilis banner-tailed kangaroo rat 105255 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys HLdipSpe1 GCF_019054845.1 NCBI ASM1905484v1 Contig 2021-06-29 Auburn University 9612466 9612466 14593 504 99 Dipodomys_stephensi__Stephenss_kangaroo_rat__HLdipSte1__GCA_004024685.1 Dipodomys stephensi Stephenss kangaroo rat 323379 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys HLdipSte1 GCA_004024685.1 NCBI DipSte_v1_BIUU Scaffold 2019-01-15 Broad Institute 30710 36811 12860 657 1679 Dipodomys_ordii__Ords_kangaroo_rat__dipOrd2__GCF_000151885.1 Dipodomys ordii Ords kangaroo rat 10020 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys dipOrd2 GCF_000151885.1 NCBI Dord_2.0 Scaffold 2014-12-12 Baylor College of Medicine 48087 11931245 13547 924 725 Perognathus_longimembris_pacificus__Pacific_pocket_mouse__HLperLonPac2__GCF_023159225.1 Perognathus longimembris pacificus Pacific pocket mouse Otognosis longimembris,little pocket mouse 214514 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Perognathinae; Perognathus; Perognathus longimembris HLperLonPac2 GCF_023159225.1 NCBI ASM2315922v1 Chromosome 2022-04-27 San Diego Zoo Wildlife Alliance 7389774 72679016 14091 1023 82 Bathyergus_suillus__Cape_dune_mole-rat__HLbatSui1 Bathyergus suillus Cape dune mole-rat Mus suillus,Cape dune mole rat 10172 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Bathyergus HLbatSui1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-13 36799 60714869 13447 790 959 Fukomys_anselli__Ansells_mole-rat__HLfukAnse1__GCA_053478225.1 Fukomys anselli Ansells mole-rat Coetomys anselli,Cryptomys anselli 261002 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys HLfukAnse1 GCA_053478225.1 NCBI DKFZ_Fans_1.0 Chromosome 2025-11-14 German Cancer Research Center 21598940 72399386 14817 359 20 Fukomys_damarensis__Damara_mole-rat__HLfukDam2__GCA_012274545.1 Fukomys damarensis Damara mole-rat Damara mole rat,Coetomys damarensis,Cryptomys damarensis 885580 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys HLfukDam2 GCA_012274545.1 NCBI DMR_v1.0_HiC Scaffold 2020-04-13 DNA Zoo Consortium 44756 62586000 13573 1261 362 Heterocephalus_glaber__naked_mole-rat__HLhetGla3 Heterocephalus glaber naked mole-rat naked mole rat 10181 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus HLhetGla3 DNA Zoo Consortium DNA Zoo Consortium 2021-01-29 40135 100148522 14446 622 128 Heterocephalus_glaber__naked_mole-rat__HLhetGla5__GCA_944319715.1 Heterocephalus glaber naked mole-rat naked mole rat 10181 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus HLhetGla5 GCA_944319715.1 NCBI Naked mole-rat maternal Chromosome 2022-07-01 hospital for sick children 3438577 95752777 12393 2739 64 Heterocephalus_glaber__naked_mole-rat__hetGla2__GCF_000247695.1 Heterocephalus glaber naked mole-rat naked mole rat 10181 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus hetGla2 GCF_000247695.1 NCBI HetGla_female_1.0 Scaffold 2012-02-17 Broad Institute 47778 20532749 14451 606 139 Cavia_porcellus__domestic_guinea_pig__HLcavPor4__GCA_034190915.1 Cavia porcellus domestic guinea pig Mus porcellus,Cavia aperea porcellus,Cavia cobaya,guinea pig 10141 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia HLcavPor4 GCA_034190915.1 NCBI mCavPor4.1 Scaffold 2023-12-07 University of Maryland 48931253 75707104 14856 319 21 Cavia_tschudii__Montane_guinea_pig__HLcavTsc1__GCA_004027695.1 Cavia tschudii Montane guinea pig 143287 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia HLcavTsc1 GCA_004027695.1 NCBI CavTsc_v1_BIUU Scaffold 2019-01-16 Broad Institute 64807 91436 14357 456 383 Cavia_aperea__Brazilian_guinea_pig__cavApe1__GCA_000688575.1 Cavia aperea Brazilian guinea pig 37548 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia cavApe1 GCA_000688575.1 NCBI CavAp1.0 Scaffold 2014-01-21 Leibniz Institute for Zoo and Wildlife research 1039 27928671 9688 1628 3880 Dolichotis_patagonum__Patagonian_cavy__HLdolPat1__GCA_004027295.1 Dolichotis patagonum Patagonian cavy Patagonian mara 29091 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Dolichotis HLdolPat1 GCA_004027295.1 NCBI DolPat_v1_BIUU Scaffold 2019-01-16 Broad Institute 27983 31026 13360 677 1159 Chinchilla_lanigera__long-tailed_chinchilla__chiLan1__GCF_000276665.1 Chinchilla lanigera long-tailed chinchilla Mus laniger,Chinchilla velligera 34839 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla chiLan1 GCF_000276665.1 NCBI ChiLan1.0 Scaffold 2012-08-28 Broad Institute 61105 21893125 14325 650 221 Lagostomus_maximus__plains_viscacha__HLlagMax1 Lagostomus maximus plains viscacha Dipus maximus 10154 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Lagostomus HLlagMax1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-11 104209 71796155 13901 646 649 Ctenodactylus_gundi__northern_gundi__HLcteGun1__GCA_004027205.1 Ctenodactylus gundi northern gundi gundi 10166 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Ctenodactylidae; Ctenodactylus HLcteGun1 GCA_004027205.1 NCBI CteGun_v1_BIUU Scaffold 2019-01-16 Broad Institute 218543 354548 14522 437 237 Ctenodactylus_gundi__Northern_gundi__HLcteGund2A__GCA_048771875.1 Ctenodactylus gundi Northern gundi gundi 10166 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Ctenodactylidae; Ctenodactylus HLcteGund2A GCA_048771875.1 NCBI mCteGun2.hap1 Chromosome 2025-03-21 Vertebrate Genomes Project 38834406 108787391 14791 372 33 Ctenomys_sociabilis__social_tuco-tuco__HLcteSoc1__GCA_004027165.1 Ctenomys sociabilis social tuco-tuco 43321 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Ctenomyidae; Ctenomys HLcteSoc1 GCA_004027165.1 NCBI CteSoc_v1_BIUU Scaffold 2019-01-16 Broad Institute 37562 49073 13570 579 1047 Dasyprocta_punctata__punctate_agouti__HLdasPun1__GCA_004363535.1 Dasyprocta punctata punctate agouti Central American agouti 34846 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Dasyproctidae; Dasyprocta HLdasPun1 GCA_004363535.1 NCBI DasPun_v1_BIUU Scaffold 2019-03-22 Broad Institute 38650 43703 13053 762 1381 Dinomys_branickii__pacarana__HLdinBra1__GCA_004027595.1 Dinomys branickii pacarana Dinomys branicki 108858 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Dinomyidae; Dinomys HLdinBra1 GCA_004027595.1 NCBI DinBra_v1_BIUU Scaffold 2019-01-16 Broad Institute 64805 77918 14289 454 453 Coendou_prehensilis__Brazilian_porcupine__HLcoePre1 Coendou prehensilis Brazilian porcupine 187985 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Erethizontidae; Coendou HLcoePre1 DNA Zoo Consortium DNA Zoo Consortium 2020-08-30 32321 42412415 13049 874 1273 Erethizon_dorsatum__North_American_porcupine__HLereDor3__GCA_028451465.1 Erethizon dorsatum North American porcupine 34844 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Erethizontidae; Erethizon HLereDor3 GCA_028451465.1 NCBI mEreDor1.pri Chromosome 2023-02-06 Vertebrate Genomes Project 19239546 127995937 14828 349 19 Hydrochoerus_hydrochaeris__capybara__HLhydHyd1__GCA_004027455.1 Hydrochoerus hydrochaeris capybara carpincho,Hydrochaeris hydrochaeris,Hydrochaerus hydrochaeris 10149 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Hydrochaeridae; Hydrochoerus HLhydHyd1 GCA_004027455.1 NCBI HydHyd_v1_BIUU Scaffold 2019-01-16 Broad Institute 148451 202224 14416 493 287 Hydrochoerus_hydrochaeris__capybara__HLhydHyd2 Hydrochoerus hydrochaeris capybara Hydrochaerus hydrochaeris,Hydrochaeris hydrochaeris,carpincho 10149 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Hydrochaeridae; Hydrochoerus HLhydHyd2 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 78219 71052467 14307 546 343 Hystrix_brachyura__Malayan_porcupine__HLhysBra1__GCA_016801275.1 Hystrix brachyura Malayan porcupine 1758,Hystrix brachyura Linnaeus 143286 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Hystricidae; Hystrix HLhysBra1 GCA_016801275.1 NCBI DSBC_Hbra_1.0 Scaffold 2021-02-02 DNA Stories Bioinformatics Center 29439 2980431 14480 608 108 Hystrix_cristata__crested_porcupine__HLhysCri1__GCA_004026905.1 Hystrix cristata crested porcupine 10137 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Hystricidae; Hystrix HLhysCri1 GCA_004026905.1 NCBI HysCri_v1_BIUU Scaffold 2019-01-16 Broad Institute 57102 64768 13940 567 689 Myocastor_coypus__coypu__HLmyoCoy2 Myocastor coypus coypu Mus coypus,coypu 10157 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Myocastoridae; Myocastor HLmyoCoy2 DNA Zoo Consortium DNA Zoo Consortium 2024-10-07 3975994 138704734 14563 507 126 Octodon_degus__degu__octDeg1__GCF_000260255.1 Octodon degus degu 10160 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon octDeg1 GCF_000260255.1 NCBI OctDeg1.0 Scaffold 2012-05-01 Broad Institute 19847 12091372 14233 593 370 Petromus_typicus__dassie-rat__HLpetTyp1__GCA_004026965.1 Petromus typicus dassie-rat Dassie rat 10183 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Petromuridae; Petromus HLpetTyp1 GCA_004026965.1 NCBI PetTyp_v1_BIUU Scaffold 2019-01-16 Broad Institute 29916 35766 12937 706 1553 Thryonomys_swinderianus__Greater_cane_rat__HLthrSwi1__GCA_004025085.1 Thryonomys swinderianus Greater cane rat 10169 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Thryonomyidae; Thryonomys HLthrSwi1 GCA_004025085.1 NCBI ThrSwi_v1_BIUU Scaffold 2019-01-15 Broad Institute 18955 21523 12437 927 1832 Orientallactaga_bullata__Gobi_jerboa__HLallBul1__GCA_004027895.1 Orientallactaga bullata Gobi jerboa Allactaga bullata 1041416 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Allactaginae; Orientallactaga HLallBul1 GCA_004027895.1 NCBI AllBul_v1_BIUU Scaffold 2019-01-16 Broad Institute 30651 36308 12073 777 2346 Orientallactaga_sibirica__Mongolian_five-toed_jerboa__HLoriSib2__GCA_041429955.1 Orientallactaga sibirica Mongolian five-toed jerboa Allactaga sibirica 234626 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Allactaginae; Orientallactaga HLoriSib2 GCA_041429955.1 NCBI ASM4142995v1 Contig 2024-08-22 Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) 50637186 50637186 14836 318 42 Scarturus_elater__small_five-toed_jerboa__HLallEla1 Scarturus elater small five-toed jerboa Allactaga elater 73861 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Allactaginae; Scarturus HLallEla1 provided by Dong-Dong Wu provided by Dong-Dong Wu 2019-03-30 20238462 20238462 13825 1283 88 Salpingotus_crassicauda__Thick-tailed_pygmy_jerboa__HLsalCra1__GCA_040869305.1 Salpingotus crassicauda Thick-tailed pygmy jerboa 1385376 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Cardiocraniinae; Salpingotus HLsalCra1 GCA_040869305.1 NCBI SalCra_1.1 Contig 2024-07-25 INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES 13709620 13709620 13969 1055 172 Dipus_sagitta__northern_three-toed_jerboa__HLdipSag1__GCA_036346955.1 Dipus sagitta northern three-toed jerboa Mus sagitta 73863 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Dipus HLdipSag1 GCA_036346955.1 NCBI IOZCAS_Dsag_1.1 Chromosome 2024-02-05 INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES 28651707 147241050 13500 1644 52 Jaculus_jaculus__lesser_Egyptian_jerboa__HLjacJac2__GCA_020740685.1 Jaculus jaculus lesser Egyptian jerboa 51337 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus HLjacJac2 GCA_020740685.1 NCBI, VGP 2021-11-07 22593140 158244790 14646 446 104 Sicista_trizona__Hungarian_birch_mouse__HLsicTriz1A__GCA_982266845.1 Sicista trizona Hungarian birch mouse Hungarian southern birch mouse,Sicista subtilis trizona 3370786 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Sicistinae; Sicista HLsicTriz1A GCA_982266845.1 NCBI mSicTri.1 Chromosome 2026-03-14 University of Debrecen 10039119 239863222 14697 402 97 Zapus_hudsonius__meadow_jumping_mouse__HLzapHud1__GCA_004024765.1 Zapus hudsonius meadow jumping mouse 160400 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Zapodinae; Zapus HLzapHud1 GCA_004024765.1 NCBI ZapHud_v1_BIUU Scaffold 2019-01-15 Broad Institute 23350 26350 12037 953 2206 Zapus_hudsonius_preblei__Prebles_meadow_jumping_mouse__HLzapHudsPre2A__GCA_057945845.1 Zapus hudsonius preblei Prebles meadow jumping mouse Preble's meadow jumping mouse,Dipus hudsonius 289486 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Zapodinae; Zapus; Zapus hudsonius HLzapHudsPre2A GCA_057945845.1 NCBI mZapHud1.hap1 Chromosome 2026-06-04 Vertebrate Genomes Project 31064746 86172243 14765 380 51 Alexandromys_fortis__Reed_vole__HLaleFor1__GCF_014885135.2 Alexandromys fortis Reed vole Microtus fortis 100897 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys HLaleFor1 GCF_014885135.2 NCBI M_Fortis_MF-2015_v1.1 Scaffold 2020-10-13 Shanghai Institute for Biological Sciences, Chinese Academy of Sciences 90683 9992017 14457 536 203 Alexandromys_oeconomus__Root_vole__HLaleOec1__GCA_963919705.1 Alexandromys oeconomus Root vole tundra vole,Microtus oeconomus,Mus oeconomus 2162900 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys HLaleOec1 GCA_963919705.1 NCBI Aoec_v1 Scaffold 2023-12-20 NORWEGIAN UNIVERSITY OF LIFE SCIENCES 60754688 60754688 14507 638 51 Alexandromys_fortis__reed_vole__HLmicFor1__GCA_014885135.1 Alexandromys fortis reed vole Microtus fortis 100897 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys HLmicFor1 GCA_014885135.1 NCBI M_Fortis_MF-2015_v1 Scaffold 2020-10-13 Shanghai Institute for Biological Sciences, Chinese Academy of Sciences 90682 9992017 14455 546 195 Alexandromys_oeconomus__root_vole__HLmicOec1__GCA_007455595.1 Alexandromys oeconomus root vole Microtus oeconomus,tundra vole 64717 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Alexandromys HLmicOec1 GCA_007455595.1 NCBI ASM745559v1 Scaffold 2019-07-25 Groningen Institute for Evolutionary Life Sciences 51221 114768 14241 331 624 Arvicola_amphibius__Eurasian_water_mole__HLarvAmp1__GCA_903992535.1 Arvicola amphibius Eurasian water mole 1758),Arvicola terrestris (Linnaeus,European water vole 1047088 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola HLarvAmp1 GCA_903992535.1 NCBI mArvAmp1.1 Chromosome 2020-08-06 SC 5392280 138658583 14108 1035 53 Chionomys_nivalis__European_snow_vole__HLchiNiv1__GCF_950005125.1 Chionomys nivalis European snow vole Arvicola nivalis,Microtus nivalis 269649 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Chionomys HLchiNiv1 GCF_950005125.1 NCBI mChiNiv1.1 Chromosome 2023-05-01 WELLCOME SANGER INSTITUTE 30960136 88844950 14857 294 45 Clethrionomys_rutilus__Northern_red-backed_vole__HLcleRut1__GCA_040207285.1 Clethrionomys rutilus Northern red-backed vole Mus rutilus,Myodes rutilus 537920 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Clethrionomys HLcleRut1 GCA_040207285.1 NCBI mMyoRut1_p1.0 Contig 2024-06-17 Canada's national platform for genome sequencing and analysis 42196457 42196457 14367 234 595 Dicrostonyx_torquatus__Arctic_lemming__HLdicTor1__GCA_028555095.1 Dicrostonyx torquatus Arctic lemming Mus lenensis 85952 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Dicrostonyx HLdicTor1 GCA_028555095.1 NCBI ASM2855509v1 Scaffold 2023-02-08 University of Alaska Fairbanks 22796 5983314 13809 524 863 Ellobius_talpinus__Northern_mole_vole__HLellTal1__GCA_001685095.1 Ellobius talpinus Northern mole vole 329620 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Ellobius HLellTal1 GCA_001685095.1 NCBI ETalpinus_0.1 Scaffold 2016-07-14 Erasmus medical center (ErasmusMC) 8259 15246 11052 1303 2841 Lasiopodomys_brandtii__Brandts_vole__HLlasBran1__GCA_052819205.1 Lasiopodomys brandtii Brandts vole Microtus (Lasiopodomys) brandtii,Lasiopodomys brandti,Microtus brandti 407171 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Lasiopodomys HLlasBran1 GCA_052819205.1 NCBI ASM5281920v1 Scaffold 2025-09-24 Zhengzhou University 242526 672141 14195 731 270 Lasiopodomys_mandarinus__Mandarin_vole__HLlasMand1__GCA_052819315.1 Lasiopodomys mandarinus Mandarin vole Arvicola mandarinus Milne-Edwards,Microtus mandarinus, 1871 399234 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Lasiopodomys HLlasMand1 GCA_052819315.1 NCBI ASM5281931v1 Scaffold 2025-09-24 Zhengzhou University 94995 6145773 13788 1084 324 Lemmus_lemmus__Norway_lemming__HLlemLemm1__GCA_964027135.1 Lemmus lemmus Norway lemming Mus lemmus 79949 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Lemmus HLlemLemm1 GCA_964027135.1 NCBI Lemmus_lemmus_n_2024_04_v2 Scaffold 2025-11-22 NBIS (National Bioinformatics Infrastructure Sweden) 51466831 104595323 14796 351 49 Microtus_agrestis__short-tailed_field_vole__HLmicAgr2__GCA_902806775.1 Microtus agrestis short-tailed field vole field vole 29092 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicAgr2 GCA_902806775.1 NCBI Field_vole_promethion_pilon Contig 2020-02-28 LIV 2938971 2938971 14341 783 72 Microtus_arvalis__Common_vole__HLmicArv1__GCA_007455615.1 Microtus arvalis Common vole 47230 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicArv1 GCA_007455615.1 NCBI ASM745561v1 Scaffold 2019-07-25 Groningen Institute for Evolutionary Life Sciences 34797 52876 13493 541 1162 Microtus_californicus__California_vole__HLmicCal1A__GCA_028537955.1 Microtus californicus California vole Arvicola californica 100895 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicCal1A GCA_028537955.1 NCBI mMicCal1.0.hap1 Scaffold 2023-02-07 UCLA 49752295 83674487 14875 284 37 Microtus_californicus__California_vole__HLmicCal1B__GCA_028537755.1 Microtus californicus California vole Arvicola californica 100895 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicCal1B GCA_028537755.1 NCBI mMicCal1.0.hap2 Scaffold 2023-02-07 UCLA 45668671 76329214 14402 251 543 Microtus_obscurus__Altai_voie__HLmicObs1__GCA_044665705.1 Microtus obscurus Altai voie Hypudaeus obscurus,Microtus arvalis obscurus 523745 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicObs1 GCA_044665705.1 NCBI MicArv1.0 Scaffold 2024-11-07 University of Bern 49201 186607134 13853 423 920 Microtus_oregoni__creeping_vole__HLmicOre1__GCF_018167655.1 Microtus oregoni creeping vole 111838 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicOre1 GCF_018167655.1 NCBI Mior012 Contig 2021-04-26 Oklahoma State Universtiy 34833828 34833828 14886 265 45 Microtus_pennsylvanicus__Meadow_vole__HLmicPen1A__GCA_037038515.1 Microtus pennsylvanicus Meadow vole Mus pennsylvanicus 10058 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicPen1A GCA_037038515.1 NCBI mMicPen1.hap1 Chromosome 2024-03-06 Vertebrate Genomes Project 47175454 125308425 14900 255 41 Microtus_pennsylvanicus__Meadow_vole__HLmicPen1B__GCA_037039175.1 Microtus pennsylvanicus Meadow vole Mus pennsylvanicus 10058 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicPen1B GCA_037039175.1 NCBI mMicPen1.hap2 Chromosome 2024-03-06 Vertebrate Genomes Project 63584353 118374433 14391 248 557 Microtus_ochrogaster__prairie_vole__micOch1__GCF_000317375.1 Microtus ochrogaster prairie vole prairie voles 79684 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus micOch1 GCF_000317375.1 NCBI MicOch1.0 Chromosome 2012-12-07 Broad Institute 21250 17270019 14586 389 221 Microtus_montanus__Montane_vole__HLmicMont1__GCA_020392405.1 Microtus montanus Montane vole Arvicola montana 88450 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus HLmicMont1 GCA_020392405.1 NCBI ASM2039240v1 Scaffold 2021-10-08 The Ohio State University 2896 2716299 8528 1581 5087 Microtus_richardsoni_arvicoloides__water_vole__HLmicRicArv1__GCA_020387435.1 Microtus richardsoni arvicoloides water vole Aulacomys arvicoloides 2821547 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Microtus; Microtus richardsoni HLmicRicArv1 GCA_020387435.1 NCBI ASM2038743v1 Scaffold 2021-10-08 The Ohio State University 38579 2298463 13834 574 788 Myodes_glareolus__Bank_vole__HLmyoGla2__GCA_902806735.1 Myodes glareolus Bank vole bank vole,Clethrionomys glareolus 447135 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Myodes HLmyoGla2 GCA_902806735.1 NCBI Bank_vole1_10x Scaffold 2020-02-22 LIV 74950 20649317 14092 600 504 Myodes_glareolus__Bank_vole__HLmyoGlar3__GCA_982192425.1 Myodes glareolus Bank vole bank vole,Clethrionomys glareolus,Mus glareolus 447135 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Myodes HLmyoGlar3 GCA_982192425.1 NCBI mMyoGla1.1 Chromosome 2026-03-08 WELLCOME SANGER INSTITUTE 14620921 90684812 14777 379 40 Neodon_fuscus__Smokey_vole__HLneoFus1__GCA_047571435.1 Neodon fuscus Smokey vole Lasiopodomys fuscus,Microtus fuscus 771787 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Neodon HLneoFus1 GCA_047571435.1 NCBI SNNU_Nfu_v1 Chromosome 2025-02-10 Shaanxi Normal University 25369699 83801500 14882 274 40 Neodon_shergylaensis__Shergyla_mountain_vole__HLneoShe1__GCA_025134845.1 Neodon shergylaensis Shergyla mountain vole 2613871 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Neodon HLneoShe1 GCA_025134845.1 NCBI SAF_Nshe_1.1 Scaffold 2022-09-02 BGI 52341 10847872 14179 543 474 Ondatra_zibethicus__muskrat__HLondZib1__GCA_004026605.1 Ondatra zibethicus muskrat Castor zibethicus 10060 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Ondatra HLondZib1 GCA_004026605.1 NCBI OndZib_v1_BIUU Scaffold 2019-01-16 Broad Institute 73746 89093 14149 422 625 Bramus_lutescens__Transcaucasian_mole_vole__HLellLut1__GCA_001685075.1 Bramus lutescens Transcaucasian mole vole Ellobius lutescens 39086 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Bramus HLellLut1 GCA_001685075.1 NCBI ASM168507v1 Scaffold 2016-07-14 Erasmus medical center (ErasmusMC) 11648 242123 11282 2881 1033 Cricetulus_griseus__Chinese_hamster__HLcriGri3__GCA_003668045.1 Cricetulus griseus Chinese hamster Cricetulus barabensis griseus,Chinese hamsters,CHO cell lines 10029 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus HLcriGri3 GCA_003668045.1 NCBI CriGri-PICR Scaffold 2018-10-21 CHO Genome Community 2098530 19581774 14634 493 69 Cricetus_cricetus__Black-bellied_hamster__HLcriCri1__GCA_964304595.1 Cricetus cricetus Black-bellied hamster common hamster,Mus cricetus 10034 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetus HLcriCri1 GCA_964304595.1 NCBI mCriCri2.1 Chromosome 2024-11-06 Centro Nacional de AnĂ¡lisis GenĂ³mico 47690202 305542590 14815 313 68 Mesocricetus_auratus__golden_hamster__HLmesAur3__GCF_017639785.1 Mesocricetus auratus golden hamster Syrian hamsters,Golden hamsters,Syrian golden hamster,Syrian hamster,Syrian golden hamsters 10036 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus HLmesAur3 GCF_017639785.1 NCBI BCM_Maur_2.0 Scaffold 2021-03-30 Baylor College of Medicine Human Genome Sequencing Center 9471653 85184847 14498 658 40 Mesocricetus_auratus__Golden_hamster__HLmesAura4__GCA_056461545.1 Mesocricetus auratus Golden hamster Syrian hamster,Syrian golden hamster,Syrian golden hamsters,Syrian hamsters,Cricetus auratus,Golden hamsters 10036 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus HLmesAura4 GCA_056461545.1 NCBI ASM5646154v1 Chromosome 2026-03-31 The First Affiliated Hospital of Zhengzhou University 35650180 114594012 14403 731 62 Phodopus_roborovskii__desert_hamster__HLphoRob1__GCA_943737965.1 Phodopus roborovskii desert hamster 109678 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Phodopus HLphoRob1 GCA_943737965.1 NCBI PHOROB Contig 2022-07-01 FREIE UNIVERSITAET BERLIN 25775705 25775705 14778 326 92 Phodopus_sungorus__winter_white_dwarf_hamster__HLphoSun2__GCA_030556225.1 Phodopus sungorus winter white dwarf hamster 10044 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Phodopus HLphoSun2 GCA_030556225.1 NCBI Psun-UiT-1 Scaffold 2023-07-31 UiT: The Arctic University of Norway 55879606 55879606 14656 493 47 Neotoma_floridana__Eastern_woodrat__HLneoFlor1A__GCA_050000055.1 Neotoma floridana Eastern woodrat 42409 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Neotoma HLneoFlor1A GCA_050000055.1 NCBI mNeoFlo1.hap1 Chromosome 2025-04-29 Vertebrate Genomes Project 28556977 95007747 14901 261 34 Neotoma_lepida__desert_woodrat__HLneoLep1__GCA_001675575.1 Neotoma lepida desert woodrat 56216 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Neotoma HLneoLep1 GCA_001675575.1 NCBI ASM167557v1 Scaffold 2016-06-23 University of Utah 9584 151693 12269 825 2102 Neotomodon_alstoni__Mexican_volcano_mouse__HLneoAls1 Neotomodon alstoni Mexican volcano mouse 230081 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Neotomodon HLneoAls1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-12 51626 91625725 9423 4169 1604 Onychomys_arenicola__Chihuahuan_grasshopper_mouse__HLonyAre1A__GCA_949786405.1 Onychomys arenicola Chihuahuan grasshopper mouse Onychomys torridus arenicola,Mearns's grasshopper mouse 38679 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys HLonyAre1A GCA_949786405.1 NCBI OncAre_H1_v1 Chromosome 2023-04-08 EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE 26219289 108432058 14764 384 48 Onychomys_arenicola__Chihuahuan_grasshopper_mouse__HLonyAre1B__GCA_949786425.1 Onychomys arenicola Chihuahuan grasshopper mouse Onychomys torridus arenicola,Mearns's grasshopper mouse 38679 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys HLonyAre1B GCA_949786425.1 NCBI OncAre_H2_v1 Chromosome 2023-04-08 EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE 29018958 102486503 14518 433 245 Onychomys_leucogaster__Northern_grasshopper_mouse__HLonyLeu1__GCA_949786385.1 Onychomys leucogaster Northern grasshopper mouse 38668 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys HLonyLeu1 GCA_949786385.1 NCBI OncLeu_H2_v1 Chromosome 2023-04-08 EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE 19200283 94124810 14663 446 87 Onychomys_torridus__southern_grasshopper_mouse__HLonyTor1__GCA_903995425.1 Onychomys torridus southern grasshopper mouse 38674 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Onychomys HLonyTor1 GCA_903995425.1 NCBI mOncTor1.1 Chromosome 2020-08-21 SC 2276141 112723509 14284 716 196 Peromyscus_crinitus__canyon_mouse__HLperCri1 Peromyscus crinitus canyon mouse 144753 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus HLperCri1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-10 138137 97468232 12743 1550 903 Peromyscus_eremicus__cactus_mouse__HLperEre1__GCA_902702925.1 Peromyscus eremicus cactus mouse 42410 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus HLperEre1 GCA_902702925.1 NCBI Peer1.7.4 Scaffold 2019-11-26 UNIVERSITY OF NEW HAMPSHIRE 64291 119957392 12292 2158 746 Peromyscus_eremicus__Cactus_mouse__HLperErem2__GCF_949786415.1 Peromyscus eremicus Cactus mouse Hesperomys eremicus 42410 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus HLperErem2 GCF_949786415.1 NCBI PerEre_H2_v1 Chromosome 2023-04-08 EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE 1332236 97176920 14405 578 213 Peromyscus_leucopus__white-footed_mouse__HLperLeu1__GCA_004664715.1 Peromyscus leucopus white-footed mouse 10041 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus HLperLeu1 GCA_004664715.1 NCBI Pero_0.1 Scaffold 2019-04-05 University of California Irvine 4102727 4476954 13463 1450 283 Peromyscus_nasutus__northern_rock_mouse__HLperNas1 Peromyscus nasutus northern rock mouse 97212 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus HLperNas1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-10 19865 98054690 12936 995 1265 Peromyscus_keeni__Northwestern_deer_mouse__HLperKeen1__GCA_058129255.1 Peromyscus keeni Northwestern deer mouse Sitomys keeni,Peromyscus maniculatus keeni 273385 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus HLperKeen1 GCA_058129255.1 NCBI mPerKee1_p1.1 Scaffold 2026-06-09 Canada's national platform for genome sequencing and analysis 34347758 110760563 14390 261 545 Peromyscus_californicus_insignis__California_mouse__HLperCal2__GCA_007827085.2 Peromyscus californicus insignis California mouse Peromyscus californicus subsp. insignis 564181 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus californicus HLperCal2 GCA_007827085.2 NCBI ASM782708v2 Scaffold 2020-03-25 University of Maryland 32644 113663737 14449 431 316 Peromyscus_californicus_insignis__California_mouse__HLperCalIns3__GCF_007827085.1 Peromyscus californicus insignis California mouse Mus californicus,Peromyscus californicus subsp. insignis 564181 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus californicus HLperCalIns3 GCF_007827085.1 NCBI ASM782708v3 Scaffold 2022-04-27 University of Maryland 8224858 115047232 14411 736 49 Peromyscus_gossypinus_allapaticola__Cotton_mouse__HLperGossAll1A__GCA_057877385.1 Peromyscus gossypinus allapaticola Cotton mouse Hesperomys gossypinus 3701075 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus gossypinus HLperGossAll1A GCA_057877385.1 NCBI mPerGos1.hap1 Chromosome 2026-06-03 Vertebrate Genomes Project 63268899 122050589 14920 243 33 Peromyscus_maniculatus_bairdii__prairie_deer_mouse__HLperManBai2__GCA_003704035.1 Peromyscus maniculatus bairdii prairie deer mouse North American deer mouse 230844 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus maniculatus HLperManBai2 GCA_003704035.1 NCBI HU_Pman_2.1 Chromosome 2018-11-01 Harvard University / Howard Hughes Medical Institute 30111 115033041 14603 418 175 Peromyscus_maniculatus_sonoriensis__North_American_deer_mouse__HLperManSon3__GCA_026229955.1 Peromyscus maniculatus sonoriensis North American deer mouse 372063 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus maniculatus HLperManSon3 GCA_026229955.1 NCBI mPerMan1.0.p Scaffold 2022-11-14 UCLA 10714300 43824230 14720 300 176 Peromyscus_maniculatus_bairdii__Prairie_deer_mouse__HLperManiBai4__GCF_049852395.1 Peromyscus maniculatus bairdii Prairie deer mouse Hesperomys maniculatus,North American deer mouse 230844 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus maniculatus HLperManiBai4 GCF_049852395.1 NCBI HU_Pman_BW_mat_3.1 Chromosome 2025-04-22 Harvard University 32642229 122208007 14904 254 38 Peromyscus_polionotus_subgriseus__oldfield_mouse__HLperPol1__GCA_003704135.2 Peromyscus polionotus subgriseus oldfield mouse 369710 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus; Peromyscus polionotus HLperPol1 GCA_003704135.2 NCBI HU_Ppol_1.3.3 Chromosome 2019-04-26 Harvard University / Howard Hughes Medical Institute 13217 117603569 14477 496 223 Reithrodontomys_megalotis_longicaudus__Western_harvest_mouse__HLreiMegLon1__GCA_043882965.1 Reithrodontomys megalotis longicaudus Western harvest mouse Reithrodon megalotis 3079464 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Reithrodontomys; Reithrodontomys megalotis HLreiMegLon1 GCA_043882965.1 NCBI mReiMeg1.0.p Scaffold 2024-10-25 University of California, Santa Cruz 9769554 98344793 14831 305 60 Scotinomys_teguina__Alstons_brown_mouse__HLscoTegu1__GCA_049901635.1 Scotinomys teguina Alstons brown mouse Hesperomys teguina 56236 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Scotinomys HLscoTegu1 GCA_049901635.1 NCBI ASM4990163v1 Contig 2025-04-24 NYU Langone Medical Center 1427988 1427988 13344 1423 429 Holochilus_nanus__Neotropical_marsh_rat__HLholNanu1__GCA_050578075.1 Holochilus nanus Neotropical marsh rat 2975443 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Sigmodontinae; Holochilus HLholNanu1 GCA_050578075.1 NCBI assembly_HNA1B_v01 Scaffold 2025-05-27 Universidade Estadual Paulista - UNESP 15080 42754 12897 544 1755 Oligoryzomys_nigripes__Black-footed_pygmy_rice_rat__HLoliNigr1A__GCA_057876635.1 Oligoryzomys nigripes Black-footed pygmy rice rat Oryzomys delticola,Large colilargo,Oligoryzomys eliurus,Mus nigripes,Brazilian colilargo,Oligoryzomys delticola 37017 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Sigmodontinae; Oligoryzomys HLoliNigr1A GCA_057876635.1 NCBI mOliNig2.hap1 Chromosome 2026-06-03 Vertebrate Genomes Project 25325819 90490158 14841 320 35 Phyllotis_vaccarum__Punta_de_Vaca_leaf-eared_mouse__HLphyVac1__GCA_033318265.1 Phyllotis vaccarum Punta de Vaca leaf-eared mouse Phyllotis xanthopygus vaccarum,Phyllotis darwini vaccarum 2804059 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Sigmodontinae; Phyllotis HLphyVac1 GCA_033318265.1 NCBI ASM3331826v1 Scaffold 2023-11-03 University of Montana 23200210 147873771 14725 405 66 Sigmodon_hispidus__Hispid_cotton_rat__HLsigHis2__GCA_041721565.1 Sigmodon hispidus Hispid cotton rat Sigmodon hispiedis 42415 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Sigmodontinae; Sigmodon HLsigHis2 GCA_041721565.1 NCBI HispidOSU Chromosome 2024-09-03 The Ohio State University 360703 107795196 14726 348 122 Sigmodon_hispidus__Hispid_cotton_rat__HLsigHisp3__GCA_047301775.1 Sigmodon hispidus Hispid cotton rat Sigmodon hispiedis 42415 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Sigmodontinae; Sigmodon HLsigHisp3 GCA_047301775.1 NCBI ASM4730177v1 Chromosome 2025-01-30 Institute of Microbiology, Chinese Academy of Sciences 77390441 118707662 14807 321 68 Acomys_cahirinus__Egyptian_spiny_mouse__HLacoCah1__GCA_004027535.1 Acomys cahirinus Egyptian spiny mouse Acomys airensis,Acomys albigena,Cairo spiny mouse 10068 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoCah1 GCA_004027535.1 NCBI AcoCah_v1_BIUU Scaffold 2019-01-16 Broad Institute 42476 65411 13578 529 1089 Acomys_cahirinus__Egyptian_spiny_mouse__HLacoCah2 Acomys cahirinus Egyptian spiny mouse Cairo spiny mouse,Acomys airensis,Acomys albigena 10068 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoCah2 https://zenodo.org/record/7761277#.ZEKxiRVBwsw https://zenodo.org/record/7761277#.ZEKxiRVBwsw 2023-04-23 57643754 127770522 14896 268 32 Acomys_dimidiatus__Eastern_spiny_mouse__HLacoDim1__GCA_907164435.1 Acomys dimidiatus Eastern spiny mouse 60744 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoDim1 GCA_907164435.1 NCBI mAcoDim1_REL_1905 Chromosome 2021-07-06 WELLCOME TRUST SANGER INSTITUTE 33040 124365287 14220 526 450 Acomys_kempi__Kemps_spiny_mouse__HLacoKem1__GCA_907164505.1 Acomys kempi Kemps spiny mouse 83762 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoKem1 GCA_907164505.1 NCBI mAcoKem2_REL_1905 Chromosome 2021-07-06 WELLCOME TRUST SANGER INSTITUTE 33625 125230826 13999 656 541 Acomys_minous__Crete_spiny_mouse__HLacoMin1__GCA_964271855.1 Acomys minous Crete spiny mouse 83528 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoMin1 GCA_964271855.1 NCBI mAcoMin1 Chromosome 2024-10-03 Genoscope CEA 29281624 122851966 14840 314 42 Acomys_percivali__Percivals_spiny_mouse__HLacoPer1__GCA_907169655.1 Acomys percivali Percivals spiny mouse 83527 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoPer1 GCA_907169655.1 NCBI mAcoPer2_REL_1905 Chromosome 2021-07-06 WELLCOME TRUST SANGER INSTITUTE 26477 126270630 13905 666 625 Acomys_russatus__golden_spiny_mouse__HLacoRus1__GCA_903995435.1 Acomys russatus golden spiny mouse 60746 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoRus1 GCA_903995435.1 NCBI mAcoRus1.1 Chromosome 2020-08-21 SC 4450755 66475698 14490 641 65 Acomys_dimidiatus__Eastern_spiny_mouse__HLacoDimi2__GCA_059469395.1 Acomys dimidiatus Eastern spiny mouse Mus dimidiatus 60744 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Deomyinae; Acomys HLacoDimi2 GCA_059469395.1 NCBI ASM5946939v1 Chromosome 2026-07-16 Lanzhou University 5269000 127578217 13814 1050 332 Meriones_psammophilus__Rodents__HLmerPsa1__GCA_036365155.1 Meriones psammophilus Rodents Gerbillus psammophilus 2800508 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones HLmerPsa1 GCA_036365155.1 NCBI Mmer_1.1 Scaffold 2024-02-05 INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES 27799564 27799564 13356 1628 212 Meriones_unguiculatus__Mongolian_gerbil__HLmerUng2__GCF_030254825.1 Meriones unguiculatus Mongolian gerbil Mongolian jird 10047 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones HLmerUng2 GCF_030254825.1 NCBI Bangor_MerUng_6.1 Chromosome 2023-06-12 Bangor University 50173090 122584302 14763 392 41 Pachyuromys_duprasi__fat-tailed_gerbil__HLpacDup1 Pachyuromys duprasi fat-tailed gerbil 298894 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Pachyuromys HLpacDup1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 47150 70283636 14084 549 563 Psammomys_obesus__fat_sand_rat__HLpsaObe1__GCA_002215935.2 Psammomys obesus fat sand rat 48139 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Psammomys HLpsaObe1 GCA_002215935.2 NCBI ASM221593v2 Scaffold 2020-02-10 Department of Zoology, University of Oxford, UK 76389 10472398 14511 548 137 Rhombomys_opimus__great_gerbil__HLrhoOpi1__GCA_010120015.1 Rhombomys opimus great gerbil 186474 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Rhombomys HLrhoOpi1 GCA_010120015.1 NCBI ASM1012001v1 Scaffold 2020-02-04 University of Oslo 56880 3610217 14129 370 697 Lophiomys_imhausi__crested_rat__HLlopImh1__GCA_907164525.1 Lophiomys imhausi crested rat 248799 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Lophiomyinae; Lophiomys HLlopImh1 GCA_907164525.1 NCBI mLopImh1.curated_primary_1811 Scaffold 2021-06-03 WELLCOME TRUST SANGER INSTITUTE 35791 6438253 13501 1268 427 Montemys_delectorum__delectable_soft-furred_mouse__HLpraDel1__GCA_019843815.1 Montemys delectorum delectable soft-furred mouse Praomys delectorum 119565 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Montemys HLpraDel1 GCA_019843815.1 NCBI ASM1984381v1 Scaffold 2021-09-01 University of Pennsylvania 13907 22327 10658 1073 3465 Apodemus_agrarius__Eurasian_field_mouse__HLapoAgr1__GCA_964023405.1 Apodemus agrarius Eurasian field mouse Mus agrarius,striped field mouse,Apodemus pratensis,Old World field mouse 39030 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Apodemus HLapoAgr1 GCA_964023405.1 NCBI mApoAgr2.1 Chromosome 2024-04-12 Centro Nacional de AnĂ¡lisis GenĂ³mico 35188814 119125257 14891 266 39 Apodemus_speciosus__Large_Japanese_field_mouse__HLapoSpe1__GCA_045298715.1 Apodemus speciosus Large Japanese field mouse 105296 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Apodemus HLapoSpe1 GCA_045298715.1 NCBI Apodemus_speciosus_assembly02 Scaffold 2024-09-08 National Institute for Environmental Studies, Japan 2358870 119829018 13538 1534 124 Apodemus_sylvaticus__European_woodmouse__HLapoSyl2__GCF_947179515.1 Apodemus sylvaticus European woodmouse Long-tailed field mouse,Mus sylvaticus,Sylvaemus sylvaticus 10129 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Apodemus; Sylvaemus group HLapoSyl2 GCF_947179515.1 NCBI mApoSyl1.1 Chromosome 2022-10-28 WELLCOME SANGER INSTITUTE 4449850 120938251 14744 398 54 Arvicanthis_niloticus__African_grass_rat__HLarvNil1__GCA_011762505.1 Arvicanthis niloticus African grass rat 61156 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis HLarvNil1 GCA_011762505.1 NCBI mArvNil1.pat.X Chromosome 2020-03-27 Vertebrate Genomes Project 11143170 82689117 14733 384 79 Arvicanthis_niloticus__Nile_rat__HLarvNilo2__GCF_011762505.2 Arvicanthis niloticus Nile rat Mus niloticus,African grass rat 61156 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis HLarvNilo2 GCF_011762505.2 NCBI mArvNil1.pat.X Chromosome 2025-01-29 Vertebrate Genomes Project 11143170 82689117 14738 378 80 Grammomys_surdaster__African_woodland_thicket_rat__HLgraSur1__GCA_004785775.1 Grammomys surdaster African woodland thicket rat Grammomys dolichurus surdaster,Thamnomys surdaster 491861 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Grammomys HLgraSur1 GCA_004785775.1 NCBI NIH_TR_1.0 Scaffold 2019-04-12 NIH Sequencing Center 51731 8094907 14604 351 241 Hydromys_chrysogaster__Golden-bellied_water_rat__HLhydChr1 Hydromys chrysogaster Golden-bellied water rat 160448 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Hydromys HLhydChr1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-13 29611 71396319 13288 770 1138 Mastacomys_fuscus__broad-toothed_rat__HLmasFus1 Mastacomys fuscus broad-toothed rat Pseudomys fuscus 337222 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastacomys HLmasFus1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-02 371229 104439433 9441 5265 490 Mastomys_coucha__southern_multimammate_mouse__HLmasCou1__GCA_008632895.1 Mastomys coucha southern multimammate mouse Praomys coucha 35658 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys HLmasCou1 GCA_008632895.1 NCBI UCSF_Mcou_1 Chromosome 2019-09-24 University of California, San Francisco 30483 118621203 14652 400 144 Mastomys_natalensis__African_soft-furred_rat__HLmasNat1 Mastomys natalensis African soft-furred rat Praomys natalensis,Natal multimammate rat,Mastomys hildebrandti,Natal multimammate mouse,Mastomys natalensis hildebrandtii,Mastomys hildebrandtii,Myomys fumatus 10112 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys HLmasNat1 provided by Joe Prescott provided by Joe Prescott 2021-04-21 19425943 167074384 14823 318 55 Micromys_minutus__European_harvest_mouse__HLmicMin1__GCA_963924665.1 Micromys minutus European harvest mouse Micromyus pygmaeus, 1872,Mus pygmaeus Milne-Edwards,Mus minutus,Eurasian harvest mouse 13151 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Micromys HLmicMin1 GCA_963924665.1 NCBI mMicMin1.1 Chromosome 2024-01-29 WELLCOME SANGER INSTITUTE 1835000 59776753 14401 609 186 Mus_pahari__shrew_mouse__HLmusPah1__GCA_900095145.2 Mus pahari shrew mouse Gairdner's shrewmouse,Gairdner's shrew-mouse,Coelomys parahi 10093 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys HLmusPah1 GCA_900095145.2 NCBI PAHARI_EIJ_v1.1 Chromosome 2017-04-28 EBI 29465 111406228 14667 360 169 Mus_caroli__Ryukyu_mouse__HLmusCar1__GCA_900094665.2 Mus caroli Ryukyu mouse ricefield mouse,Mus formosanus 10089 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus HLmusCar1 GCA_900094665.2 NCBI CAROLI_EIJ_v1.1 Chromosome 2017-04-28 EBI 30916 122627250 14641 342 213 Mus_musculus__House_mouse__HLmusMusc41__GCA_949316315.1 Mus musculus House mouse Mus sp. 129SV,Balb/c mouse,mouse,transgenic mice,LK3 transgenic mice,nude mice 10090 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus HLmusMusc41 GCA_949316315.1 NCBI mMusMuc1.1 Chromosome 2023-04-08 WELLCOME SANGER INSTITUTE 39533248 132150484 14882 230 84 Mus_spicilegus__steppe_mouse__HLmusSpi1__GCA_003336285.1 Mus spicilegus steppe mouse mound-building mouse,Mus hortulanus 10103 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus HLmusSpi1 GCA_003336285.1 NCBI MUSP714 Scaffold 2018-07-23 Oklahoma State Universtiy 30918 2198966 14408 430 358 Mus_spretus__Western_wild_mouse__HLmusSpr2__GCA_921997135.2 Mus spretus Western wild mouse Mus musculus spretus,Algerian mouse 10096 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus HLmusSpr2 GCA_921997135.2 NCBI SPRET_EiJ_v3 Chromosome 2022-06-30 EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE 10023970 129120363 14885 252 59 Mus_musculus__house_mouse__mm10__GCF_000001635.20 Mus musculus house mouse transgenic mice,LK3 transgenic mice,Mus sp. 129SV,nude mice,mouse 10090 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus mm10 GCF_000001635.20 NCBI GRCm38 Chromosome 2012-01-09 Genome Reference Consortium 32273079 52589046 14892 243 61 Mus_musculus__house_mouse__mm39__GCF_000001635.27 Mus musculus house mouse mouse,LK3 transgenic mice,transgenic mice,nude mice,Mus sp. 129SV 10090 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus mm39 GCF_000001635.27 NCBI GRCm39 Chromosome 2020-06-24 Genome Reference Consortium 59462871 106145001 14915 225 56 Mus_musculus_molossinus__Japanese_wild_mouse__HLmusMusMol40__GCA_921999095.1 Mus musculus molossinus Japanese wild mouse LK3 transgenic mice,mouse,Mus molossinus,Mus sp. 129SV,house mouse,nude mice,transgenic mice 57486 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus HLmusMusMol40 GCA_921999095.1 NCBI JF1_MsJ_v2 Scaffold 2021-12-17 EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE 14436447 132291597 14896 238 62 Mus_minutoides__Southern_African_pygmy_mouse__HLmusMin1__GCA_902729475.2 Mus minutoides Southern African pygmy mouse Nannomys minutoides 10105 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Nannomys HLmusMin1 GCA_902729475.2 NCBI Mus_minutoides_I6164_v1 Scaffold 2020-09-25 INSTITUT DES SCIENCES DE L'EVOLUTION DE MONTPELLIER, UNIVERSITE DE MONTPELLIER, CNRS-EPHE-IRD-UM 74168 6564238 14580 383 233 Pseudomys_desertor__brown_desert_mouse__HLpseDes1 Pseudomys desertor brown desert mouse 221914 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Pseudomys HLpseDes1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 536677 103158894 9058 5865 273 Pseudomys_fumeus__smoky_mouse__HLpseFum1 Pseudomys fumeus smoky mouse 442609 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Pseudomys HLpseFum1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-12 35900 72176581 13526 678 992 Rattus_norvegicus__Norway_rat__HLratNor8__GCF_036323735.1 Rattus norvegicus Norway rat rat,rats,Rattus sp. strain Wistar,brown rat,laboratory rat,Rattus PC12 clone IS,Mus norvegicus,Buffalo rat,Sprague-Dawley rat,zitter rats,Wistar rats 10116 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus HLratNor8 GCF_036323735.1 NCBI GRCr8 Chromosome 2024-01-31 Genome Reference Consortium 64250101 137014596 14874 266 56 Rattus_rattus__black_rat__HLratRat7__GCA_011064425.1 Rattus rattus black rat Rattus rattoides,roof rat,house rat,Rattus wroughtoni 10117 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus HLratRat7 GCA_011064425.1 NCBI Rrattus_CSIRO_v1 Chromosome 2020-03-04 CSIRO 1635336 158824752 13682 1318 196 Rattus_norvegicus__Norway_rat__rn7__GCF_015227675.2 Rattus norvegicus Norway rat Rattus PC12 clone IS,Rattus sp. strain Wistar,laboratory rat,Buffalo rat,Wistar rats,zitter rats,rat,Sprague-Dawley rat,brown rat,rats 10116 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus rn7 GCF_015227675.2 NCBI mRatBN7.2 Chromosome 2020-11-10 Wellcome Sanger Institute 29198295 135012528 14752 389 55 Rhabdomys_dilectus__mesic_four-striped_grass_rat__HLrhaDil1__GCA_019844195.1 Rhabdomys dilectus mesic four-striped grass rat 996586 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rhabdomys HLrhaDil1 GCA_019844195.1 NCBI ASM1984419v1 Scaffold 2021-09-01 University of Pennsylvania 27270 2320431 13571 458 1167 Rhabdomys_pumilio__Four-striped_grass_mouse__HLrhaPum1__GCA_030674055.1 Rhabdomys pumilio Four-striped grass mouse Mus pumilio 121573 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rhabdomys HLrhaPum1 GCA_030674055.1 NCBI PU_Rpum_1.0 Scaffold 2023-08-07 Princeton University 45029 83564217 14436 411 349 Rhynchomys_soricoides__Mount_Data_shrew_rat__HLrhySor1__GCA_019843965.1 Rhynchomys soricoides Mount Data shrew rat 1217597 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rhynchomys HLrhySor1 GCA_019843965.1 NCBI ASM1984396v1 Scaffold 2021-09-01 University of Pennsylvania 79773 7860034 13897 470 829 Tokudaia_muenninki__Okinawa_island_spiny_rat__HLtokMue1__GCA_036184385.1 Tokudaia muenninki Okinawa island spiny rat Tokudamys osimensis muenninki 742503 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Tokudaia HLtokMue1 GCA_036184385.1 NCBI Tmue1 Scaffold 2023-09-08 Hokkaido University, Graduate School of Life Science 19740843 121843864 14857 290 49 Tokudaia_osimensis__Amami-oshima_island_spiny_rat__HLtokOsi1__GCA_027943515.1 Tokudaia osimensis Amami-oshima island spiny rat Rattus jerdoni osimensis 73109 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Tokudaia HLtokOsi1 GCA_027943515.1 NCBI T_osimensis_1.0 Scaffold 2022-11-01 Hokkaido University, Graduate School of Life Science 52400 10966626 14785 297 114 Tokudaia_tokunoshimensis__Tokunoshima_spiny_rat__HLtokTok1__GCA_036184795.1 Tokudaia tokunoshimensis Tokunoshima spiny rat 742508 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Tokudaia HLtokTok1 GCA_036184795.1 NCBI Ttok1 Scaffold 2023-09-08 Hokkaido University, Graduate School of Life Science 13597559 125076325 14854 292 50 Uromys_caudimaculatus__giant_uromys__HLuroCau1 Uromys caudimaculatus giant uromys giant white-tailed rat 36800 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Uromys HLuroCau1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 49189 99048585 14184 469 543 Cricetomys_ansorgei__southern_giant_pouched_rat__HLcriAns1 Cricetomys ansorgei southern giant pouched rat 1157628 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Nesomyidae; Cricetomyinae; Cricetomys HLcriAns1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-18 13581387 49543905 14170 980 46 Cricetomys_gambianus__Gambian_giant_pouched_rat__HLcriGam1__GCA_004027575.1 Cricetomys gambianus Gambian giant pouched rat Gambian pouched rats,Gambian pouched rat,Gambian rat,Gambia rat 10085 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Nesomyidae; Cricetomyinae; Cricetomys HLcriGam1 GCA_004027575.1 NCBI CriGam_v1_BIUU Scaffold 2019-01-16 Broad Institute 80761 110049 14014 477 705 Typhlomys_cinereus__Soft-furred_tree_mouse__HLtypCin1__GCA_023101885.1 Typhlomys cinereus Soft-furred tree mouse 687455 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Platacanthomyidae; Typhlomys HLtypCin1 GCA_023101885.1 NCBI KIZ_TCIN_v1.0 Scaffold 2022-04-25 Kunming Institute of Zoology 1971523 4558085 13395 1595 206 Eospalax_fontanierii__Chinese_zokor__HLeosFon1__GCA_035773235.1 Eospalax fontanierii Chinese zokor Myospalax fontanierii 146134 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Myospalacinae; Eospalax HLeosFon1 GCA_035773235.1 NCBI ASM3577323v1 Chromosome 2024-01-24 Lanzhou University 59200000 82041474 14947 217 32 Eospalax_rufescens__Qinling_zokor__HLeosRufe1__GCA_057930555.1 Eospalax rufescens Qinling zokor Myotalpa rufescens 146137 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Myospalacinae; Eospalax HLeosRufe1 GCA_057930555.1 NCBI Eruf_1.0 Chromosome 2026-06-04 School of Life Sciences 38956688 90329371 14913 252 31 Myospalax_aspalax__False_zokor__HLmyoAspa1__GCA_049190835.1 Myospalax aspalax False zokor 213498 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Myospalacinae; Myospalax HLmyoAspa1 GCA_049190835.1 NCBI ASM4919083v1 Chromosome 2025-03-31 Lanzhou University 37952886 89298488 14840 332 24 Myospalax_psilurus__Transbaikal_zokor__HLmyoPsil1__GCA_049190895.1 Myospalax psilurus Transbaikal zokor 146129 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Myospalacinae; Myospalax HLmyoPsil1 GCA_049190895.1 NCBI ASM4919089v1 Chromosome 2025-03-31 Lanzhou University 23106468 76917133 14849 298 49 Rhizomys_pruinosus__hoary_bamboo_rat__HLrhiPru1__GCA_009823505.1 Rhizomys pruinosus hoary bamboo rat 53275 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Rhizomyinae; Rhizomys HLrhiPru1 GCA_009823505.1 NCBI RhiPru_1.0 Scaffold 2019-12-31 Chinese Academy of Sciences 103291 2203772 13361 1023 812 Nannospalax_galili__Upper_Galilee_mountains_blind_mole_rat__nanGal1__GCF_000622305.1 Nannospalax galili Upper Galilee mountains blind mole rat Spalax galili,Nannospalax ehrenbergi galili 1026970 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax nanGal1 GCF_000622305.1 NCBI S.galili_v1.0 Scaffold 2014-06-05 BGI 30353 3618479 14290 677 229 Aplodontia_rufa__mountain_beaver__HLaplRuf1__GCA_004027875.1 Aplodontia rufa mountain beaver sewellel 51342 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Aplodontiidae; Aplodontia HLaplRuf1 GCA_004027875.1 NCBI AplRuf_v1_BIUU Scaffold 2019-01-16 Broad Institute 33245 37811 13721 476 999 Glis_glis__Fat_dormouse__HLgliGli1__GCA_004027185.1 Glis glis Fat dormouse Myoxus glis 41261 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Glirinae; Glis HLgliGli1 GCA_004027185.1 NCBI GliGli_v1_BIUU Scaffold 2019-01-16 Broad Institute 26062 30338 12736 563 1897 Graphiurus_murinus__woodland_dormouse__HLgraMur1__GCA_004027655.1 Graphiurus murinus woodland dormouse Graphiurus raptor 51346 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Graphiurinae; Graphiurus HLgraMur1 GCA_004027655.1 NCBI GraMur_v1_BIUU Scaffold 2019-01-16 Broad Institute 22138 28463 11822 1020 2354 Graphiurus_kelleni__savanna_dormouse__HLgraKel3 Graphiurus kelleni savanna dormouse Graphiurus parvus,Kellen's african dormouse 1223622 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Graphiurinae; Graphiurus HLgraKel3 https://ngdc.cncb.ac.cn/gwh/Assembly/84862/show; Ningyawen Liu https://ngdc.cncb.ac.cn/gwh/Assembly/84862/show; Ningyawen Liu 2020-04-11 26642503 26642503 13916 1222 58 Eliomys_quercinus__garden_dormouse__HLeliQue1A__GCA_051143605.1 Eliomys quercinus garden dormouse Mus quercinus 53277 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Leithiinae; Eliomys HLeliQue1A GCA_051143605.1 NCBI 2023-10-26 51740598 108114398 14917 242 37 Eliomys_quercinus__garden_dormouse__HLeliQue1B__GCA_051143595.1 Eliomys quercinus garden dormouse Mus quercinus 53277 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Leithiinae; Eliomys HLeliQue1B GCA_051143595.1 NCBI 2023-10-26 45399149 107541173 13404 984 808 Muscardinus_avellanarius__hazel_dormouse__HLmusAve1__GCA_004027005.1 Muscardinus avellanarius hazel dormouse hazel mouse 39082 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Muscardinus HLmusAve1 GCA_004027005.1 NCBI MusAve_v1_BIUU Scaffold 2019-01-16 Broad Institute 44294 59013 13905 414 877 Muscardinus_avellanarius__Hazel_dormouse__HLmusAvel2__GCA_963383645.1 Muscardinus avellanarius Hazel dormouse Mus avellanarius,hazel mouse 39082 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Gliridae; Muscardinus HLmusAvel2 GCA_963383645.1 NCBI mMusAve1.1 Chromosome 2023-08-26 WELLCOME SANGER INSTITUTE 2432660 119481734 14911 246 39 Glaucomys_volans__southern_flying_squirrel__HLglaVol1__GCA_020662805.1 Glaucomys volans southern flying squirrel 64683 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Pteromyini; Glaucomys HLglaVol1 GCA_020662805.1 NCBI ASM2066280v1 Scaffold 2021-10-28 Wildlife Research and Monitoring Section 75533 452493 14428 333 435 Glaucomys_sabrinus__Northern_flying_squirrel__HLglaSabr1__GCA_058129135.1 Glaucomys sabrinus Northern flying squirrel Sciurus sabrinus 45482 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Pteromyini; Glaucomys HLglaSabr1 GCA_058129135.1 NCBI mGlaSab1_p1.1 Scaffold 2026-06-09 Canada's national platform for genome sequencing and analysis 51512442 138130982 15010 169 17 Pteromys_volans__Siberian_flying_squirrel__HLpteVola1__GCA_051107445.1 Pteromys volans Siberian flying squirrel Sciurus volans 55152 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Pteromyini; Pteromys HLpteVola1 GCA_051107445.1 NCBI Uoulu_pteVol_1.0 Chromosome 2025-06-26 University of Oulu 60698384 157387023 15057 136 3 Sciurus_carolinensis__gray_squirrel__HLneoCar1__GCA_020004445.1 Sciurus carolinensis gray squirrel Neosciurus carolinensis,eastern gray squirrel 30640 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus HLneoCar1 GCA_020004445.1 NCBI ASM2000444v1 Scaffold 2021-09-15 Novartis AG 33020 1023051 14633 455 108 Sciurus_carolinensis__gray_squirrel__HLsciCar1__GCA_902686445.1 Sciurus carolinensis gray squirrel eastern gray squirrel 30640 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus HLsciCar1 GCA_902686445.1 NCBI mSciCar1.1 Chromosome 2019-11-26 SC 13975867 148229995 14157 1029 10 Sciurus_niger__fox_squirrel__HLsciNig1__GCA_020740815.1 Sciurus niger fox squirrel eastern fox squirrel 34861 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus HLsciNig1 GCA_020740815.1 NCBI VCOM_Snig_1.0 Scaffold 2021-11-04 Edward Via College of Osteopathic Medicine 182340 183784 13338 520 1338 Sciurus_vulgaris__Eurasian_red_squirrel__HLsciVul1__GCA_902686455.1 Sciurus vulgaris Eurasian red squirrel red squirrel 55149 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Sciurini; Sciurus HLsciVul1 GCA_902686455.1 NCBI mSciVul1.1 Chromosome 2019-11-26 SC 16333633 153872958 14507 672 17 Tamiasciurus_hudsonicus__American_red_squirrel__HLtamHuds1__GCA_057657825.1 Tamiasciurus hudsonicus American red squirrel red squirrel 10009 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Sciurinae; Tamiasciurini; Tamiasciurus HLtamHuds1 GCA_057657825.1 NCBI, VGP https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tamiasciurus_hudsonicus/mTamHud3/assembly_curated/ 2026-05-01 94737435 213340194 15002 182 12 Callospermophilus_lateralis__Golden-mantled_ground_squirrel__HLcalLat1A__GCA_048772815.1 Callospermophilus lateralis Golden-mantled ground squirrel Tamias lateralis,Spermophilus lateralis 76772 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Callospermophilus HLcalLat1A GCA_048772815.1 NCBI mCalLat2.hap1 Chromosome 2025-03-21 Vertebrate Genomes Project 6579271 94176142 14811 344 41 Callospermophilus_lateralis__Golden-mantled_ground_squirrel__HLcalLat1B__GCA_048772825.1 Callospermophilus lateralis Golden-mantled ground squirrel Spermophilus lateralis,Tamias lateralis 76772 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Callospermophilus HLcalLat1B GCA_048772825.1 NCBI mCalLat2.hap2 Chromosome 2025-03-21 Vertebrate Genomes Project 13623428 114988597 13949 566 681 Cynomys_gunnisoni__Gunnisons_prairie_dog__HLcynGun1__GCA_011316645.1 Cynomys gunnisoni Gunnisons prairie dog 45479 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Cynomys HLcynGun1 GCA_011316645.1 NCBI ASM1131664v1 Scaffold 2020-03-16 Smithsonian Herndon Data Center 687762 824613 14608 286 302 Cynomys_ludovicianus__Black-tailed_prairie_dog__HLcynLudo1__GCA_052576455.1 Cynomys ludovicianus Black-tailed prairie dog Arctomys ludoviciana 45480 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Cynomys HLcynLudo1 GCA_052576455.1 NCBI ASM5257645v1 Scaffold 2025-09-12 Smithsonian Institution 567348 1032944 14237 462 497 Ictidomys_tridecemlineatus__thirteen-lined_ground_squirrel__HLictTri2__GCF_016881025.1 Ictidomys tridecemlineatus thirteen-lined ground squirrel Spermophilus tridecemlineatus,Citellus tridecemlineatus 43179 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys HLictTri2 GCF_016881025.1 NCBI HiC_Itri_2 Chromosome 2021-02-17 Stanford University School of Medicine 44127 193221680 14337 479 380 Ictidomys_tridecemlineatus__Thirteen-lined_ground_squirrel__HLictTrid4A__GCA_052094955.1 Ictidomys tridecemlineatus Thirteen-lined ground squirrel Spermophilus tridecemlineatus,Citellus tridecemlineatus,Sciurus tridecemlineatus 43179 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys HLictTrid4A GCA_052094955.1 NCBI mIctTri1.hap1 Chromosome 2025-08-18 Vertebrate Genomes Project 10558370 157082519 14968 190 38 Ictidomys_tridecemlineatus__Thirteen-lined_ground_squirrel__HLictTrid4B__GCA_052094965.1 Ictidomys tridecemlineatus Thirteen-lined ground squirrel Sciurus tridecemlineatus,Citellus tridecemlineatus,Spermophilus tridecemlineatus 43179 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys HLictTrid4B GCA_052094965.1 NCBI mIctTri1.hap2 Chromosome 2025-08-18 Vertebrate Genomes Project 13926175 185360950 13043 1137 1016 Marmota_flaviventris__yellow-bellied_marmot__HLmarFla1__GCA_003676075.2 Marmota flaviventris yellow-bellied marmot 93162 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarFla1 GCA_003676075.2 NCBI GSC_YBM_2.0 Scaffold 2019-05-24 Canada's Genomic Enterprise 143681 11407078 14855 252 89 Marmota_flaviventris__Yellow-bellied_marmot__HLmarFlav2A__GCF_047511675.1 Marmota flaviventris Yellow-bellied marmot Arctomys flaviventer 93162 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarFlav2A GCF_047511675.1 NCBI mMarFla1.hap1 Chromosome 2025-02-10 Vertebrate Genomes Project 52587502 136846803 15002 185 9 Marmota_flaviventris__Yellow-bellied_marmot__HLmarFlav2B__GCA_047512175.1 Marmota flaviventris Yellow-bellied marmot Arctomys flaviventer 93162 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarFlav2B GCA_047512175.1 NCBI mMarFla1.hap2 Chromosome 2025-02-10 Vertebrate Genomes Project 47537411 138730837 14446 218 532 Marmota_himalayana__Himalayan_marmot__HLmarHim1__GCA_005280165.1 Marmota himalayana Himalayan marmot 93163 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarHim1 GCA_005280165.1 NCBI ASM528016v1 Scaffold 2019-05-10 Xian Jiaotong University Health Science Center 102162 1497034 13817 654 725 Marmota_himalayana__Himalayan_marmot__HLmarHima2__GCA_056512325.1 Marmota himalayana Himalayan marmot Arctomys himalayanus 93163 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarHima2 GCA_056512325.1 NCBI ASM5651232v1 Chromosome 2026-04-01 Central South University of Forestry and Technology 107925267 163488075 15035 154 7 Marmota_monax__woodchuck__HLmarMon3__GCA_021218885.1 Marmota monax woodchuck woodchucks,groundhog 9995 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarMon3 GCA_021218885.1 NCBI Marmota_monax_Labrador192_V1.0 Scaffold 2021-12-15 Hospital for Sick Children 10671126 11523559 14994 163 39 Marmota_vancouverensis__Vancouver_marmot__HLmarVan1__GCA_005458795.1 Marmota vancouverensis Vancouver marmot 93167 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarVan1 GCA_005458795.1 NCBI GSC_VIM_1.0 Scaffold 2019-05-16 Canada's Genomic Enterprise 11502 1590947 13087 1236 873 Marmota_vancouverensis__Vancouver_Island_marmot__HLmarVanc2__GCA_040207255.1 Marmota vancouverensis Vancouver Island marmot Vancouver marmot 93167 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota HLmarVanc2 GCA_040207255.1 NCBI mMarVan1_p1.0 Contig 2024-06-17 Canada's national platform for genome sequencing and analysis 66661095 66661095 13476 338 1382 Marmota_marmota_marmota__Alpine_marmot__HLmarMar1__GCA_001458135.1 Marmota marmota marmota Alpine marmot European marmot 9994 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota; Marmota marmota HLmarMar1 GCA_001458135.1 NCBI marMar2.1 Scaffold 2015-11-20 MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH 66492 31340621 13629 1237 330 Otospermophilus_beecheyi__California_ground_squirrel__HLotoBeec1__GCA_051821045.1 Otospermophilus beecheyi California ground squirrel Sciurus beecheyi,Spermophilus beecheyi 34862 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Otospermophilus HLotoBeec1 GCA_051821045.1 NCBI Obeecheyi_v1 Chromosome 2025-08-05 University of Michigan 418950 124984502 9756 4249 1191 Spermophilus_citellus__European_suslik__HLspeCit1__GCA_964194105.1 Spermophilus citellus European suslik Mus citellus,European ground squirrel,Citellus citellus 9997 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Spermophilus HLspeCit1 GCA_964194105.1 NCBI mSpeCit3.1 Chromosome 2024-06-28 WELLCOME SANGER INSTITUTE 3445081 155990855 15006 172 18 Spermophilus_dauricus__Daurian_ground_squirrel__HLspeDau1__GCA_002406435.1 Spermophilus dauricus Daurian ground squirrel Citellus dauricus 99837 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Spermophilus HLspeDau1 GCA_002406435.1 NCBI ASM240643v1 Scaffold 2017-09-28 BGI-shenzhen 34849 1761345 11513 3120 563 Tamias_sibiricus__Siberian_chipmunk__HLtamSib1__GCA_025594165.1 Tamias sibiricus Siberian chipmunk Tamias asiaticus,Eutamias sibiricus 64680 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Tamias HLtamSib1 GCA_025594165.1 NCBI ASM2559416v1 Chromosome 2022-10-06 Qufu Normal University 9422552 172614981 11308 3802 86 Tamias_sibiricus__Siberian_chipmunk__HLtamSibi2__GCA_047496905.1 Tamias sibiricus Siberian chipmunk Sciurus sibiricus,Eutamias sibiricus,Tamias asiaticus 64680 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Tamias HLtamSibi2 GCA_047496905.1 NCBI ASM4749690v1 Chromosome 2025-02-07 China Astronaut Research and Training Center 9155588 166459957 11426 3667 103 Urocitellus_parryii__Arctic_ground_squirrel__HLuroPar1__GCA_003426925.1 Urocitellus parryii Arctic ground squirrel Spermophilus parryi,Spermophilus parryii,Citellus parryii 9999 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus HLuroPar1 GCA_003426925.1 NCBI ASM342692v1 Scaffold 2018-08-24 UAF 91013 3964291 14558 368 270 Urocitellus_parryii__Arctic_ground_squirrel__HLuroPar2A__GCA_045843805.1 Urocitellus parryii Arctic ground squirrel Spermophilus parryii,Spermophilus parryi,Arctomys parryii,Citellus parryii 9999 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus HLuroPar2A GCA_045843805.1 NCBI mUroPar1.hap1 Chromosome 2024-12-13 Vertebrate Genomes Project 23164455 184159334 14748 402 46 Urocitellus_parryii__Arctic_ground_squirrel__HLuroPar2B__GCA_045843765.1 Urocitellus parryii Arctic ground squirrel Arctomys parryii,Spermophilus parryii,Spermophilus parryi,Citellus parryii 9999 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus HLuroPar2B GCA_045843765.1 NCBI mUroPar1.hap2 Chromosome 2024-12-12 Vertebrate Genomes Project 19265769 168114946 13251 1220 725 Xerus_inauris__South_African_ground_squirrel__HLxerIna1__GCA_004024805.1 Xerus inauris South African ground squirrel 234690 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Xerini; Xerus HLxerIna1 GCA_004024805.1 NCBI XerIna_v1_BIUU Scaffold 2019-01-15 Broad Institute 64054 83865 14114 424 658 Xerus_rutilus__unstriped_ground_squirrel__HLxerRut1__GCA_028644305.1 Xerus rutilus unstriped ground squirrel 226860 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Xerini; Xerus HLxerRut1 GCA_028644305.1 NCBI, DNA Zoo Consortium 2021-07-21 57622 127260801 13875 526 795 Allenopithecus_nigroviridis__Allens_swamp_monkey__HLallNig1 Allenopithecus nigroviridis Allens swamp monkey 54135 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Allenopithecus HLallNig1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-11 47878 115073448 13759 471 966 Cercocebus_atys__sooty_mangabey__cerAty1__GCF_000955945.1 Cercocebus atys sooty mangabey Cercocebus torquatus atys 9531 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus cerAty1 GCF_000955945.1 NCBI Caty_1.0 Scaffold 2015-03-19 Human Genome Sequencing Center - BCM 112942 12849131 14209 840 147 Cercopithecus_albogularis__Sykes_monkey__HLcerAlb1__GCA_023783535.1 Cercopithecus albogularis Sykes monkey Cercopithecus mitis albogularis 867370 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercopithecus HLcerAlb1 GCA_023783535.1 NCBI ASM2378353v1 Contig 2022-06-17 BGI-Shenzhen 13914891 13914891 13771 1274 151 Cercopithecus_mitis__blue_monkey__HLcerMit1 Cercopithecus mitis blue monkey 36225 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercopithecus HLcerMit1 DNA Zoo Consortium DNA Zoo Consortium 2022-05-30 27912 51119100 12369 1020 1807 Cercopithecus_mona__Mona_monkey__HLcerMon1__GCA_014849445.1 Cercopithecus mona Mona monkey 36226 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercopithecus HLcerMon1 GCA_014849445.1 NCBI KIZ_CMon_1.0 Scaffold 2020-10-05 Kunming Institute of Zoology, Chinese Academy of Sciences 22791723 22791723 14666 249 281 Cercopithecus_neglectus__De_Brazzas_monkey__HLcerNeg1__GCA_004027615.1 Cercopithecus neglectus De Brazzas monkey 36227 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercopithecus HLcerNeg1 GCA_004027615.1 NCBI CertNeg_v1_BIUU Scaffold 2019-01-16 Broad Institute 9789 10270 11545 1060 2591 Cercopithecus_neglectus__De_Brazzas_monkey__HLcerNegl2__GCA_963574685.1 Cercopithecus neglectus De Brazzas monkey 36227 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercopithecus HLcerNegl2 GCA_963574685.1 NCBI PGDP_CerNeg Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 44010 44019 12445 559 2192 Chlorocebus_aethiops__grivet__HLchlAet1__GCA_023783515.1 Chlorocebus aethiops grivet African green monkeys,savanah monkey,Ceropithecus aethiops,African green monkey 9534 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus HLchlAet1 GCA_023783515.1 NCBI ASM2378351v1 Contig 2022-06-17 BGI-Shenzhen 9639656 9639656 14271 823 102 Chlorocebus_sabaeus__green_monkey__HLchlSab3__GCF_015252025.1 Chlorocebus sabaeus green monkey Cercopithecus sabeus,Cercopithecus sabaeus,Cercopithecus aethiops sabaeus,Chlorocebus sabeus,Simia sabaea,Chlorocebus aethiops sabeus,Chlorocebus aethiops sabaeus 60711 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus HLchlSab3 GCF_015252025.1 NCBI Vero_WHO_p1.0 Scaffold 2020-11-06 Viral Vectors and Vaccines Bioprocessing Group, McGill University 839654 81790585 14731 409 56 Chlorocebus_sabaeus__Green_monkey__HLchlSaba4A__GCF_047675955.1 Chlorocebus sabaeus Green monkey Chlorocebus aethiops sabeus,Chlorocebus aethiops sabaeus,Cercopithecus sabaeus,Cercopithecus sabeus,Simia sabaea,Chlorocebus sabeus,Cercopithecus aethiops sabaeus 60711 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus HLchlSaba4A GCF_047675955.1 NCBI mChlSab1.0.hap1 Chromosome 2025-02-12 University of California Santa Cruz 13913161 100816256 15056 126 14 Erythrocebus_patas__red_guenon__HLeryPat3__GCA_023783455.1 Erythrocebus patas red guenon patas monkey,hussar,Cercopithecus patas 9538 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Erythrocebus HLeryPat3 GCA_023783455.1 NCBI ASM2378345v1 Contig 2022-06-17 BGI-Shenzhen 18747272 18747272 13442 1540 214 Lophocebus_aterrimus__Black_crested_mangabey__HLlopAte1__GCA_023783235.1 Lophocebus aterrimus Black crested mangabey Cercopithecus aterrimus,Lophocebus albigena aterrimus,Cercocebus aterrimus 75566 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Lophocebus HLlopAte1 GCA_023783235.1 NCBI ASM2378323v1 Contig 2022-06-17 BGI-Shenzhen 6802059 6802059 13806 1267 123 Macaca_arctoides__stump-tailed_macaque__HLmacArc1__GCA_021188215.1 Macaca arctoides stump-tailed macaque bear macaque 9540 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacArc1 GCA_021188215.1 NCBI Marc_1.0 Scaffold 2021-12-15 Sichuan University 72158 2128367 14825 194 177 Macaca_assamensis__Assam_macaque__HLmacAss1__GCA_023783095.1 Macaca assamensis Assam macaque Macaca assamenses 9551 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacAss1 GCA_023783095.1 NCBI ASM2378309v1 Contig 2022-06-17 BGI-Shenzhen 27348716 27348716 13479 1634 83 Macaca_cyclopis__Taiwan_macaque__HLmacCyc1__GCA_026956025.1 Macaca cyclopis Taiwan macaque 78449 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacCyc1 GCA_026956025.1 NCBI MCyc01 Chromosome 2022-12-19 Academia Sinica 7139826 152979943 15074 102 20 Macaca_fascicularis__crab-eating_macaque__HLmacFas7__GCF_012559485.2 Macaca fascicularis crab-eating macaque cynomolgus macaque,crab eating macaque,cynomolgus monkeys,long-tailed macaque,Macaca cynomolgus,cynomolgus monkey,Simia fascicularis,Macaca irus 9541 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacFas7 GCF_012559485.2 NCBI MFA1912RKSv2 Chromosome 2021-10-26 Keio University / RIKEN 26251577 149803873 15076 105 15 Macaca_fascicularis__Crab-eating_macaque__HLmacFas8__GCF_037993035.1 Macaca fascicularis Crab-eating macaque long-tailed macaque,Macaca cynomolgus,Cynomolgus,Simia fascicularis,cynomolgus monkeys,CYNOMOLGUS,cynomolgus macaque,Macaca irus,crab eating macaque,cynomolgus monkey 9541 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacFas8 GCF_037993035.1 NCBI T2T-MFA8v1.0 Complete Genome 2024-04-05 Shanghai Jiao Tong University 162126771 162126771 15135 53 8 Macaca_fuscata__Japanese_macaque__HLmacFus1 Macaca fuscata Japanese macaque Japanese monkeys,Japanese monkey 9542 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacFus1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-07 87996 149352196 14791 285 120 Macaca_mulatta__Rhesus_monkey__HLmacMula11__GCF_049350105.2 Macaca mulatta Rhesus monkey Cercopithecus mulatta,rhesus macaque,rhesus monkeys,rhesus macaques 9544 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacMula11 GCF_049350105.2 NCBI T2T-MMU8v2.0 Complete Genome 2025-07-24 Shanghai Jiao Tong University 162285572 162285572 15147 44 5 Macaca_nemestrina__Pig-tailed_macaque__HLmacNeme2A__GCF_043159975.1 Macaca nemestrina Pig-tailed macaque Simia nemestrina,pigtail macaque,pigtail monkey 9545 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacNeme2A GCF_043159975.1 NCBI mMacNem.hap1 Chromosome 2024-10-15 Vertebrate Genomes Project 40835442 154799650 14867 308 21 Macaca_nigra__Celebes_crested_macaque__HLmacNir1__GCA_928851695.1 Macaca nigra Celebes crested macaque 54600 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacNir1 GCA_928851695.1 NCBI mMacNir1.1 Scaffold 2022-02-09 IBE (Institut de Biologia Evolutiva) 60712129 60712129 12066 3121 9 Macaca_silenus__liontail_macaque__HLmacSil1__GCA_023807365.1 Macaca silenus liontail macaque 54601 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca HLmacSil1 GCA_023807365.1 NCBI ASM2380736v1 Contig 2022-06-20 BGI-Shenzhen 25691658 25691658 14872 190 134 Macaca_nemestrina__pig-tailed_macaque__macNem1__GCF_000956065.1 Macaca nemestrina pig-tailed macaque pigtail macaque,pigtail monkey 9545 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca macNem1 GCF_000956065.1 NCBI Mnem_1.0 Scaffold 2015-03-19 Baylor College of Medicine 106897 15219753 14201 833 162 Macaca_mulatta__Rhesus_monkey__rheMac10__GCF_003339765.1 Macaca mulatta Rhesus monkey rhesus monkeys,rhesus macaques,rhesus macaque 9544 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca rheMac10 GCF_003339765.1 NCBI Mmul_10 Chromosome 2019-02-13 The Genome Institute at Washington University School of Medicine 46608966 82346004 15075 111 10 Macaca_thibetana_thibetana__Pere_Davids_macaque__HLmacThiThi1__GCF_024542745.1 Macaca thibetana thibetana Pere Davids macaque 257877 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca thibetana HLmacThiThi1 GCF_024542745.1 NCBI ASM2454274v1 Chromosome 2022-08-09 Sichuan university 48622411 150623419 14986 196 14 Mandrillus_leucophaeus__drill__HLmanLeu2__GCA_023783495.1 Mandrillus leucophaeus drill Papio leucophaeus 9568 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus HLmanLeu2 GCA_023783495.1 NCBI ASM2378349v1 Scaffold 2022-06-17 BGI-Shenzhen 149093 27319382 14892 185 119 Mandrillus_sphinx__mandrill__HLmanSph2 Mandrillus sphinx mandrill Papio sphinx 9561 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus HLmanSph2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-19 20976 149088477 14078 992 126 Mandrillus_sphinx__mandrill__HLmanSph3__GCA_023783085.1 Mandrillus sphinx mandrill Papio sphinx 9561 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus HLmanSph3 GCA_023783085.1 NCBI ASM2378308v1 Contig 2022-06-17 BGI-Shenzhen 20999372 20999372 12448 2499 249 Miopithecus_talapoin__talapoin__HLmioTal1 Miopithecus talapoin talapoin Cercopithecus talapoin 36231 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Miopithecus HLmioTal1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-14 75535 99916881 14441 276 479 Papio_anubis__olive_baboon__HLpapAnu5__GCA_008728515.1 Papio anubis olive baboon Papio hamadryas anubis,baboon,Anubis baboon,Doguera baboon,Papio cynocephalus anubis,Papio doguera,Papio hamadryas doguera,Kenya baboon 9555 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio HLpapAnu5 GCA_008728515.1 NCBI Panubis1.0 Chromosome 2019-10-02 University of California, San Francisco 1464978 140274886 14438 628 130 Papio_anubis__olive_baboon__HLpapAnu6__GCA_008728515.2 Papio anubis olive baboon Papio hamadryas doguera,Doguera baboon,baboon,Kenya baboon,Anubis baboon,Papio doguera,Papio cynocephalus anubis,Papio hamadryas anubis 9555 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio HLpapAnu6 GCA_008728515.2 NCBI Panubis1.1 Chromosome 2022-04-27 University of California, San Francisco 1465768 140185856 14298 749 149 Papio_hamadryas__hamadryas_baboon__HLpapHam2__GCA_023781915.1 Papio hamadryas hamadryas baboon red baboon,sacred baboon,western baboon,baboon 9557 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio HLpapHam2 GCA_023781915.1 NCBI ASM2378191v1 Contig 2022-06-17 BGI-Shenzhen 24989958 24989958 13585 1459 152 Papio_papio__Guinea_baboon__HLpapPap1 Papio papio Guinea baboon Papio cynocephalus papio,baboon,Papio hamadryas papio 100937 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio HLpapPap1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-12 44495 116598389 13191 633 1372 Theropithecus_gelada__gelada__HLtheGel1__GCA_003255815.1 Theropithecus gelada gelada bleeding heart baboon,gelada baboon 9565 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Theropithecus HLtheGel1 GCA_003255815.1 NCBI Tgel_1.0 Chromosome 2018-06-19 Kenneth Chiou's shared submissions 310061 130230028 14833 181 182 Colobus_guereza__mantled_guereza__HLcolGue1__GCA_021498455.1 Colobus guereza mantled guereza eastern black-and -white colobus,guereza,Colobus abyssinicus 33548 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus HLcolGue1 GCA_021498455.1 NCBI ASM2149845v1 Chromosome 2022-01-19 BGI-Shenzhen 15612012 145964134 13339 1747 110 Colobus_guereza__Mantled_guereza__HLcolGuer2__GCA_030247045.1 Colobus guereza Mantled guereza Colobus abyssinicus,guereza,eastern black-and -white colobus 33548 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus HLcolGuer2 GCA_030247045.1 NCBI ASM3024704v1 Chromosome 2023-06-12 BGI-Shenzhen 15612012 149281349 13335 1739 122 Colobus_angolensis_palliatus__Angolan_colobus__colAng1__GCF_000951035.1 Colobus angolensis palliatus Angolan colobus Angola colobus 336983 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis colAng1 GCF_000951035.1 NCBI Cang.pa_1.0 Scaffold 2015-03-12 Baylor College of Medicine 38363 7840981 14260 502 434 Nasalis_larvatus__Proboscis_monkey__HLnasLarv2__GCA_047834645.1 Nasalis larvatus Proboscis monkey Cercopithecus larvatus 43780 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Nasalis HLnasLarv2 GCA_047834645.1 NCBI ASM4783464v1 Chromosome 2025-02-18 Northwest University 4333480 135457967 14673 466 57 Nasalis_larvatus__proboscis_monkey__nasLar1__GCA_000772465.1 Nasalis larvatus proboscis monkey 43780 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Nasalis nasLar1 GCA_000772465.1 NCBI Charlie1.0 Chromosome 2014-11-10 Proboscis Monkey Functional Genome Consortium 13295 137426304 8538 3691 2967 Piliocolobus_tephrosceles__Ugandan_red_Colobus__HLpilTep2__GCA_002776525.3 Piliocolobus tephrosceles Ugandan red Colobus Procolobus badius tephrosceles,Procolobus rufomitratus tephrosceles 591936 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Piliocolobus HLpilTep2 GCA_002776525.3 NCBI ASM277652v3 Chromosome 2019-12-12 University of Oregon 98446 131283114 14440 255 501 Pygathrix_nemaeus__Red_shanked_douc_langur__HLpygNem1__GCA_004024825.1 Pygathrix nemaeus Red shanked douc langur dove langur 54133 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Pygathrix HLpygNem1 GCA_004024825.1 NCBI PygNem_v1_BIUU Scaffold 2019-01-15 Broad Institute 51434 68569 13826 367 1003 Pygathrix_nigripes__Black-shanked_douc_langur__HLpygNig1__GCA_023764695.1 Pygathrix nigripes Black-shanked douc langur Pygathrix nemaeus nigripes 310352 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Pygathrix HLpygNig1 GCA_023764695.1 NCBI ASM2376469v1 Contig 2022-06-17 BGI-Shenzhen 14260291 14260291 11233 3824 139 Rhinopithecus_bieti__Black-and-white_snub-nosed_monkey__HLrhiBiet3 Rhinopithecus bieti Black-and-white snub-nosed monkey Pygathrix bieti,Yunnan snub-nosed monkey 61621 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus HLrhiBiet3 https://ngdc.cncb.ac.cn/gwh/Assembly/24510/show https://ngdc.cncb.ac.cn/gwh/Assembly/24510/show 2025-04-09 5779005 145697888 14387 679 130 Rhinopithecus_roxellana__golden_snub-nosed_monkey__HLrhiRox2__GCA_007565055.1 Rhinopithecus roxellana golden snub-nosed monkey Pygathrix roxellana 61622 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus HLrhiRox2 GCA_007565055.1 NCBI ASM756505v1 Chromosome 2019-07-29 Northwest University 5723610 144559847 14729 413 54 Rhinopithecus_strykeri__Burmese_snub-nosed_monkey__HLrhiStr1__GCA_023764705.1 Rhinopithecus strykeri Burmese snub-nosed monkey Myanmar snub-nosed monkey 1194336 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus HLrhiStr1 GCA_023764705.1 NCBI ASM2376470v1 Contig 2022-06-17 BGI-Shenzhen 16766498 16766498 12278 2718 200 Rhinopithecus_bieti__black_snub-nosed_monkey__rhiBie1__GCF_001698545.1 Rhinopithecus bieti black snub-nosed monkey Pygathrix bieti 61621 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus rhiBie1 GCF_001698545.1 NCBI ASM169854v1 Scaffold 2016-08-03 Laboratory for conservation and utilization of Bio-resource 36417 2225337 12475 2426 295 Semnopithecus_entellus__Hanuman_langur__HLsemEnt1__GCA_004025065.1 Semnopithecus entellus Hanuman langur Presbytis entellus 88029 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Semnopithecus HLsemEnt1 GCA_004025065.1 NCBI SemEnt_v1_BIUU Scaffold 2019-01-15 Broad Institute 25064 29955 12579 808 1809 Trachypithecus_francoisi__Francoiss_langur__HLtraFra1__GCA_009764315.1 Trachypithecus francoisi Francoiss langur Francois's leaf monkey,Indochinese langur,Presbytis francoisi 54180 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Trachypithecus HLtraFra1 GCA_009764315.1 NCBI Tfra_2.0 Scaffold 2019-12-18 INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES 16182741 130977661 14411 740 45 Trachypithecus_germaini__Indochinese_lutung__HLtraGer1__GCA_047047975.1 Trachypithecus germaini Indochinese lutung Trachypithecus margarita 271260 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Trachypithecus HLtraGer1 GCA_047047975.1 NCBI ASM4704797v1 Contig 2025-01-23 Northwest University 55907425 55907425 15070 116 10 Trachypithecus_shortridgei__Shortridges_langur__HLtraShor1__GCA_054345695.1 Trachypithecus shortridgei Shortridges langur 1042121 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Trachypithecus HLtraShor1 GCA_054345695.1 NCBI ASM5434569v1 Scaffold 2026-01-05 Northwest University 50335884 134094747 15088 99 9 Trachypithecus_phayrei_crepuscula__Phayres_leaf_monkey__HLtraPhaCre1__GCA_023762245.1 Trachypithecus phayrei crepuscula Phayres leaf monkey Trachypithecus crepusculus,Trachypithecus phayrei crepusculus,Presbytis phayrei 272121 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Trachypithecus; Trachypithecus phayrei HLtraPhaCre1 GCA_023762245.1 NCBI ASM2376224v1 Contig 2022-06-17 BGI-Shenzhen 14781066 14781066 10971 4079 146 Gorilla_beringei__Eastern_gorilla__HLgorBer1__GCA_963575185.1 Gorilla beringei Eastern gorilla mountain gorilla,highland gorilla,gorilla 499232 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla HLgorBer1 GCA_963575185.1 NCBI PGDP_GorBer Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 54617 54617 13265 546 1385 Gorilla_gorilla__western_gorilla__HLgorGor7__GCA_029281585.3 Gorilla gorilla western gorilla Troglodytes gorilla,gorilla 9593 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla HLgorGor7 GCA_029281585.3 NCBI 2023-12-09 150804130 150804130 15126 66 4 Gorilla_gorilla_gorilla__western_lowland_gorilla__gorGor6__GCF_008122165.1 Gorilla gorilla gorilla western lowland gorilla lowland gorilla,western gorilla,gorilla,Troglodytes gorilla 9595 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla gorGor6 GCF_008122165.1 NCBI Kamilah_GGO_v0 Chromosome 2019-08-28 University of Washington 9522971 26116462 14599 415 182 Homo_sapiens__human__hg38__GCF_000001405.38 Homo sapiens human man 9606 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo hg38 GCF_000001405.38 NCBI GRCh38.p12 Chromosome 2017-12-21 Genome Reference Consortium 56413054 59364414 -1 -1 -1 Pan_paniscus__pygmy_chimpanzee__HLpanPan4__GCA_029289425.3 Pan paniscus pygmy chimpanzee bonobo 9597 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan HLpanPan4 GCA_029289425.3 NCBI 2023-12-09 147028407 147028407 15159 37 0 Pan_troglodytes__chimpanzee__HLpanTro7__GCA_028858775.2 Pan troglodytes chimpanzee Simia troglodytes 9598 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan HLpanTro7 GCA_028858775.2 NCBI 2023-12-09 146288486 146288486 15151 45 0 Pan_troglodytes__chimpanzee__panTro6__GCF_002880755.1 Pan troglodytes chimpanzee 9598 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan panTro6 GCF_002880755.1 NCBI Clint_PTRv2 Chromosome 2018-01-19 University of Washington 12268567 53103722 15026 144 26 Pongo_abelii__Sumatran_orangutan__HLponAbe4__GCA_028885655.2 Pongo abelii Sumatran orangutan Orangutan,Pongo pygmaeus abelii,orang utan,Pongo pygmaeus abeli,Orang-utan 9601 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo HLponAbe4 GCA_028885655.2 NCBI 2023-12-09 146197178 146197178 15156 36 4 Pongo_pygmaeus__Bornean_orangutan__HLponPyg1__GCA_023767775.1 Pongo pygmaeus Bornean orangutan orang utan,Orangutan,Orang-utan 9600 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo HLponPyg1 GCA_023767775.1 NCBI ASM2376777v1 Scaffold 2022-06-17 BGI-Shenzhen 15810633 15810633 13874 1163 159 Pongo_pygmaeus__Bornean_orangutan__HLponPyg2__GCA_028885625.2 Pongo pygmaeus Bornean orangutan orang utan,Simia pygmaeus,Orangutan,Orang-utan 9600 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo HLponPyg2 GCA_028885625.2 NCBI 2024-01-12 140592248 143261986 15157 34 5 Pongo_abelii__Sumatran_orangutan__ponAbe3__GCF_002880775.1 Pongo abelii Sumatran orangutan orang utan,Pongo pygmaeus abelii,Pongo pygmaeus abeli,Orang-utan,Orangutan 9601 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo ponAbe3 GCF_002880775.1 NCBI Susie_PABv2 Chromosome 2018-01-19 University of Washington 11074009 98475126 14972 203 21 Hoolock_leuconedys__eastern_hoolock_gibbon__HLhooLeu1__GCA_023748175.1 Hoolock leuconedys eastern hoolock gibbon Hoolock hoolock leuconedys,Bunopithecus hoolock leuconedys 593543 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Hoolock HLhooLeu1 GCA_023748175.1 NCBI ASM2374817v1 Scaffold 2022-06-16 BGI-Shenzhen 22338800 22338800 11491 3569 136 Hylobates_agilis__agile_gibbon__HLhylAgi1 Hylobates agilis agile gibbon 9579 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Hylobates HLhylAgi1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-13 35216 93981261 13081 725 1390 Hylobates_moloch__silvery_gibbon__HLhylMol2__GCA_009828535.2 Hylobates moloch silvery gibbon 81572 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Hylobates HLhylMol2 GCA_009828535.2 NCBI HMol_V2 Scaffold 2020-02-13 University of California, Santa Cruz 265822 125196221 14716 270 210 Hylobates_pileatus__pileated_gibbon__HLhylPil1__GCA_021498465.1 Hylobates pileatus pileated gibbon 9589 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Hylobates HLhylPil1 GCA_021498465.1 NCBI ASM2149846v1 Chromosome 2022-01-19 BGI-Shenzhen 17385161 131825309 14640 397 159 Nomascus_leucogenys__northern_white-cheeked_gibbon__HLnomLeu4__GCA_006542625.1 Nomascus leucogenys northern white-cheeked gibbon Nomascus leucogenys leucogenys,Hylobates concolor leucogyneus,White-cheeked Gibbon,Hylobates leucogenys leucogenys,Hylobates concolor leucogenys,Nomascus leukogenys,Hylobates leucogenys 61853 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus HLnomLeu4 GCA_006542625.1 NCBI Asia_NLE_v1 Chromosome 2019-07-02 University of Washington 12782853 35886894 15012 153 31 Nomascus_leucogenys__Northern_white-cheeked_gibbon__HLnomLeuc5__GCA_040113115.1 Nomascus leucogenys Northern white-cheeked gibbon Hylobates concolor leucogenys,Nomascus leucogenys leucogenys,Nomascus leukogenys,Hylobates leucogenys,Hylobates concolor leucogyneus,Hylobates leucogenys leucogenys,White-cheeked Gibbon 61853 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus HLnomLeuc5 GCA_040113115.1 NCBI ASM4011311v1 Chromosome 2024-06-12 Shandong University of Technology 102188915 124246014 15109 75 12 Nomascus_siki__southern_white-cheeked_gibbon__HLnomSik1__GCA_023783065.1 Nomascus siki southern white-cheeked gibbon Hylobates concolor siki,Nomascus leucogenys siki 9586 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus HLnomSik1 GCA_023783065.1 NCBI ASM2378306v1 Scaffold 2022-06-17 BGI-Shenzhen 8523852 19995890 13665 1363 168 Symphalangus_syndactylus__siamang__HLsymSyn3__GCF_028878055.1 Symphalangus syndactylus siamang Simia syndactyla,Hylobates syndactylus 9590 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Symphalangus HLsymSyn3 GCF_028878055.1 NCBI NHGRI_mSymSyn1-v1.1-hic.freeze_pri Chromosome 2023-02-28 National Human Genome Research Institute, National Institutes of Health 141752677 142586120 14338 707 151 Symphalangus_syndactylus__siamang__HLsymSyn4__GCA_028878055.3 Symphalangus syndactylus siamang Hylobates syndactylus,Simia syndactyla 9590 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Symphalangus HLsymSyn4 GCA_028878055.3 NCBI 2024-01-12 146713733 146713733 15086 103 7 Aotus_nancymaae__Mas_night_monkey__aotNan1__GCF_000952055.2 Aotus nancymaae Mas night monkey Aotus nancymai 37293 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus aotNan1 GCF_000952055.2 NCBI Anan_2.0 Scaffold 2017-06-09 Baylor College of Medicine 126456 8268663 13480 1416 300 Alouatta_caraya__Black_howler_monkey__HLaloCara1__GCA_963575295.1 Alouatta caraya Black howler monkey Simia caraya 9502 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Alouattinae; Alouatta HLaloCara1 GCA_963575295.1 NCBI PGDP_AloCar Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 32391 32393 11833 1031 2332 Alouatta_palliata__mantled_howler_monkey__HLaloPal1__GCA_004027835.1 Alouatta palliata mantled howler monkey 30589 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Alouattinae; Alouatta HLaloPal1 GCA_004027835.1 NCBI AloPal_v1_BIUU Scaffold 2019-01-16 Broad Institute 51304 72427 13465 494 1237 Alouatta_macconnelli__red_howler_monkey__HLaloCar1 Alouatta macconnelli red howler monkey 198115 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Alouattinae; Alouatta HLaloCar1 https://ngdc.cncb.ac.cn/gwh/Assembly/130756/show; Ningyawen Liu https://ngdc.cncb.ac.cn/gwh/Assembly/130756/show; Ningyawen Liu 2022-05-21 112554496 112554496 15046 139 11 Ateles_belzebuth__White-bellied_spider_monkey__HLateBel1__GCA_963573605.1 Ateles belzebuth White-bellied spider monkey long-haired spider monkey 9507 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateBel1 GCA_963573605.1 NCBI PGDP_AteBel Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 51917 51919 13217 529 1450 Ateles_chamek__Black_spider_monkey__HLateCha1__GCA_963574935.1 Ateles chamek Black spider monkey Ateles paniscus chamek,Simia chamek,Ateles chamek (Humboldt, 1812),Ateles belzebuth chamek,Chamek spider monkey 118643 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateCha1 GCA_963574935.1 NCBI PGDP_AteCha Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 51908 51921 13225 554 1417 Ateles_fusciceps__Brown-headed_spider_monkey__HLateFus1__GCA_036589455.2 Ateles fusciceps Brown-headed spider monkey Ateles geoffroyi fusciceps 9508 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateFus1 GCA_036589455.2 NCBI USFQ_Afusci_2 Scaffold 2024-12-17 Universidad San Francisco de Quito 7542955 7560531 4262 10905 29 Ateles_geoffroyi__black-handed_spider_monkey__HLateGeo1__GCA_004024785.1 Ateles geoffroyi black-handed spider monkey Central American spider monkey 9509 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateGeo1 GCA_004024785.1 NCBI AteGeo_v1_BIUU Scaffold 2019-01-15 Broad Institute 59033 73111 13649 498 1049 Ateles_geoffroyi__black-handed_spider_monkey__HLateGeo2__GCA_023783555.1 Ateles geoffroyi black-handed spider monkey Central American spider monkey 9509 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateGeo2 GCA_023783555.1 NCBI ASM2378355v1 Contig 2022-06-17 BGI-Shenzhen 29212752 29212752 13331 1821 44 Ateles_hybridus__brown_spider_monkey__HLateHyb1__GCA_916098195.1 Ateles hybridus brown spider monkey Ateles belzebuth hybridus 129801 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateHyb1 GCA_916098195.1 NCBI ORGONE_01 Scaffold 2021-09-22 IBE (Institut de Biologia Evolutiva)) 50515269 50515269 3875 11295 26 Ateles_marginatus__White-cheeked_spider_monkey__HLateMar1__GCA_963573555.1 Ateles marginatus White-cheeked spider monkey 1529884 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateMar1 GCA_963573555.1 NCBI PGDP_AteMar Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 53900 53900 13239 589 1368 Ateles_paniscus__Red-faced_black_spider_monkey__HLatePan1__GCA_963573985.1 Ateles paniscus Red-faced black spider monkey Simia paniscus 9510 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLatePan1 GCA_963573985.1 NCBI PGDP_AtePan Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 58585 58589 13354 528 1314 Ateles_belzebuth__White-bellied_spider_monkey__HLateBelz2__GCA_057808415.1 Ateles belzebuth White-bellied spider monkey long-haired spider monkey 9507 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Ateles HLateBelz2 GCA_057808415.1 NCBI USFQ_Abelze_01 Contig 2026-06-01 Universidad San Francisco de Quito 12780818 12780818 15068 103 25 Brachyteles_arachnoides__Woolly_spider_monkey__HLbraAra1__GCA_047496155.1 Brachyteles arachnoides Woolly spider monkey Simia arachnoides,muriqui 30594 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Brachyteles HLbraAra1 GCA_047496155.1 NCBI ASM4749615v1 Contig 2025-02-07 Kent State University 58885235 58885235 14159 1025 12 Brachyteles_hypoxanthus__Northern_muriqui__HLbraHypo1__GCA_049997475.1 Brachyteles hypoxanthus Northern muriqui Simia hypoxantha,Brachyteles arachnoides hypoxanthus 342807 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Brachyteles HLbraHypo1 GCA_049997475.1 NCBI UFG_Bhy_1.0 Scaffold 2025-04-29 Primate Conservation Sequencing Consortium 16955 29133 12729 741 1726 Lagothrix_lagotricha__Brown_woolly_monkey__HLlagLag1__GCA_963574225.1 Lagothrix lagotricha Brown woolly monkey Humboldt's woolly monkey,common woolly monkey,Simia lagotricha,Lagothrix lagotricha lagotricha 9519 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Atelidae; Atelinae; Lagothrix HLlagLag1 GCA_963574225.1 NCBI PGDP_LagLag Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 71029 71029 13575 531 1090 Callimico_goeldii__Goeldis_marmoset__HLcalGoe1 Callimico goeldii Goeldis marmoset Goeldi's monkey,Midas goeldii 9495 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callimico HLcalGoe1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-11 46120 111553634 13745 561 890 Callithrix_jacchus__white-tufted-ear_marmoset__HLcalJac5__GCF_011100555.1 Callithrix jacchus white-tufted-ear marmoset Callithrix jacchus jacchus,common marmoset,white ear-tufted marmoset,Simia jacchus 9483 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix HLcalJac5 GCF_011100555.1 NCBI mCalJa1.2.pat.X Chromosome 2021-04-28 Vertebrate Genomes Project 13222669 136971485 14859 315 22 Callithrix_jacchus__White-tufted-ear_marmoset__HLcalJacc6__GCA_049354715.1 Callithrix jacchus White-tufted-ear marmoset white ear-tufted marmoset,Simia jacchus,common marmoset,Callithrix jacchus jacchus 9483 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix HLcalJacc6 GCA_049354715.1 NCBI calJac240_pri Chromosome 2025-04-08 University of California Santa Cruz 137132494 141933726 15062 126 8 Callithrix_penicillata__Black-pencilled_marmoset__HLcalPen1__GCA_046862485.1 Callithrix penicillata Black-pencilled marmoset Simia penicillata,black tufted-ear marmoset,Callithrix jacchus penicillata 57378 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix HLcalPen1 GCA_046862485.1 NCBI Cpen_1.0 Chromosome 2025-01-22 Arizona State University 32659 124262003 11407 1669 2120 Callithrix_jacchus__white-tufted-ear_marmoset__calJac4__GCF_009663435.1 Callithrix jacchus white-tufted-ear marmoset Callithrix jacchus jacchus,common marmoset,white ear-tufted marmoset 9483 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix calJac4 GCF_009663435.1 NCBI Callithrix_jacchus_cj1700_1.1 Chromosome 2020-05-22 McDonnell Genome Institute at Washington University 25227091 98198953 15007 168 21 Cebuella_pygmaea__pygmy_marmoset__HLcalPym1 Cebuella pygmaea pygmy marmoset Callithrix pygmaea 9493 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Cebuella HLcalPym1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-03 56835 118608034 13953 483 760 Leontocebus_fuscicollis__Brown-headed_tamarin__HLleoFusc1__GCA_963575285.1 Leontocebus fuscicollis Brown-headed tamarin Saguinus fuscicollis,saddlebacked tamarin, 1823),Leontocebus fuscicollis (Spix,Midas fuscicollis,saddle-backed tamarin 9487 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Leontocebus HLleoFusc1 GCA_963575285.1 NCBI PGDP_LeoFus Scaffold 2023-11-03 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 28038 28049 11755 933 2508 Leontopithecus_chrysomelas__golden-headed_lion_tamarin__HLleoChr1 Leontopithecus chrysomelas golden-headed lion tamarin Leontopithecus rosalia chrysomelas,Midas chrysomelas,gold-and-black lion tamarin 57374 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Leontopithecus HLleoChr1 DNA Zoo Consortium DNA Zoo Consortium 2023-05-05 47635 117770500 13871 502 823 Leontopithecus_rosalia__golden_lion_tamarin__HLleoRos1 Leontopithecus rosalia golden lion tamarin Leontopithecus rosalia rosalia 30588 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Leontopithecus HLleoRos1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-13 55332 121128971 14051 483 662 Leontopithecus_rosalia__Golden_lion_tamarin__HLleoRosa2A__GCA_054824895.1 Leontopithecus rosalia Golden lion tamarin Leontopithecus rosalia rosalia 30588 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Leontopithecus HLleoRosa2A GCA_054824895.1 NCBI mLeoRos1.hap1 Chromosome 2026-01-29 Vertebrate Genomes Project 54097536 144012852 14102 903 191 Saguinus_imperator__tamarin__HLsagImp1__GCA_004024885.1 Saguinus imperator tamarin emperor tamarin 9491 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Saguinus HLsagImp1 GCA_004024885.1 NCBI SagImp_v1_BIUU Scaffold 2019-01-15 Broad Institute 53787 65636 13852 479 865 Saguinus_midas__Midas_tamarin__HLsagMid1__GCA_021498475.1 Saguinus midas Midas tamarin 30586 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Saguinus HLsagMid1 GCA_021498475.1 NCBI ASM2149847v1 Chromosome 2022-01-19 BGI-Shenzhen 10987047 143273090 13605 1481 110 Saguinus_oedipus__Cotton-top_tamarin__HLsagOed1__GCA_031835075.1 Saguinus oedipus Cotton-top tamarin 9490 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Saguinus HLsagOed1 GCA_031835075.1 NCBI ASM3183507v1 Chromosome 2023-09-25 The Ohio State University 91852676 148490209 15014 136 46 Saguinus_labiatus__Red-chested_mustached_tamarin__HLsagLabi1__GCA_963575005.1 Saguinus labiatus Red-chested mustached tamarin 78454 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Saguinus HLsagLabi1 GCA_963575005.1 NCBI PGDP_SagLab Scaffold 2023-11-03 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 30080 30082 11930 894 2372 Cebus_albifrons__white-fronted_capuchin__HLcebAlb2__GCA_023783575.1 Cebus albifrons white-fronted capuchin brown pale-fronted capuchin,pale-fronted capuchin 9514 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus HLcebAlb2 GCA_023783575.1 NCBI ASM2378357v1 Contig 2022-06-17 BGI-Shenzhen 18502463 18502463 13593 1455 148 Cebus_imitator__white-faced_sapajou__cebCap1__GCF_001604975.1 Cebus imitator white-faced sapajou Cebus capucinus imitator,white-faced capuchin,white-throated capuchin 1737458 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus cebCap1 GCF_001604975.1 NCBI Cebus_imitator-1.0 Scaffold 2016-04-04 McDonnell Genome Institute - Washington University School of Medicine 41196 5274112 14693 259 244 Sapajus_apella__Tufted_capuchin__HLsapApe1__GCA_009761245.1 Sapajus apella Tufted capuchin Cebus apella,brown capuchin,black-capped capuchin,brown-capped capuchin 9515 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Sapajus HLsapApe1 GCA_009761245.1 NCBI GSC_monkey_1.0 Scaffold 2019-12-17 Canada's Genomic Enterprise 144042 23742480 14627 251 318 Sapajus_apella__tufted_capuchin__HLsapApe3__GCA_023762875.2 Sapajus apella tufted capuchin Simia apella,Cebus apella,brown capuchin,brown-capped capuchin,black-capped capuchin 9515 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Sapajus HLsapApe3 GCA_023762875.2 NCBI ASM2376287v2 Scaffold 2022-06-17 BGI-Shenzhen 12583278 12583278 13620 1474 102 Saimiri_boliviensis__Bolivian_squirrel_monkey__HLsaiBoli4__GCA_048565385.1 Saimiri boliviensis Bolivian squirrel monkey 27679 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri HLsaiBoli4 GCA_048565385.1 NCBI mSaiBol1.pri Chromosome 2025-03-12 Vertebrate Genomes Project 69222429 129414808 15082 96 18 Saimiri_sciureus__Common_squirrel_monkey__HLsaiSci1__GCA_963573345.1 Saimiri sciureus Common squirrel monkey Simia sciurea,South American squirrel monkey 9521 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri HLsaiSci1 GCA_963573345.1 NCBI PGDP_SaiSci Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 28615 28615 11318 871 3007 Saimiri_boliviensis_boliviensis__Bolivian_squirrel_monkey__HLsaiBolBol2__GCF_016699345.1 Saimiri boliviensis boliviensis Bolivian squirrel monkey 39432 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis HLsaiBolBol2 GCF_016699345.1 NCBI BCM_Sbol_2.0 Scaffold 2021-01-12 Baylor College of Medicine Human Genome Sequencing Center 4857773 87238321 14640 533 23 Saimiri_boliviensis_boliviensis__Bolivian_squirrel_monkey__HLsaiBolBol3__GCF_016699345.2 Saimiri boliviensis boliviensis Bolivian squirrel monkey 39432 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis HLsaiBolBol3 GCF_016699345.2 NCBI BCM_Sbol_2.1 Scaffold 2021-01-12 Baylor College of Medicine Human Genome Sequencing Center 4857773 87238321 14641 528 27 Cheracebus_lucifer__Primates__HLcheLuc1__GCA_963573755.1 Cheracebus lucifer Primates 2487712 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Cheracebus HLcheLuc1 GCA_963573755.1 NCBI PGDP_CheLuc Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 46755 46755 13076 788 1332 Cheracebus_lugens__Black_titi__HLcheLug1__GCA_963574535.1 Cheracebus lugens Black titi Simia lugens,Callicebus lugens,Callicebus torquatus lugens 210166 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Cheracebus HLcheLug1 GCA_963574535.1 NCBI PGDP_CheLug Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 58812 58813 13366 633 1197 Cheracebus_regulus__Jurua_collared_titi__HLcheReg1__GCA_963574635.1 Cheracebus regulus Jurua collared titi 1812110 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Cheracebus HLcheReg1 GCA_963574635.1 NCBI PGDP_CheReg Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 56688 56688 13344 643 1209 Cheracebus_torquatus__Collared_titi__HLcheTor1__GCA_963574645.1 Cheracebus torquatus Collared titi Callitrix torquata,Callitrix torquatus,Callicebus torquatus 30592 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Cheracebus HLcheTor1 GCA_963574645.1 NCBI PGDP_CheTor Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 49680 49680 13200 771 1225 Plecturocebus_bernhardi__Prince_Bernhards_titi__HLpleBer1__GCA_963574705.1 Plecturocebus bernhardi Prince Bernhards titi Callicebus bernhardi 1812036 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleBer1 GCA_963574705.1 NCBI PGDP_PleBer Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 48015 48015 13066 854 1276 Plecturocebus_brunneus__Brown_titi__HLpleBru1__GCA_963573885.1 Plecturocebus brunneus Brown titi Callicebus brunneus,Callithrix brunnea 1812042 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleBru1 GCA_963573885.1 NCBI PGDP_PleBru Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 52164 52164 13153 784 1259 Plecturocebus_caligatus__Chestnut-bellied_titi__HLpleCal1__GCA_963575255.1 Plecturocebus caligatus Chestnut-bellied titi Callicebus caligatus,Callithrix caligatus,Callithrix caligata 867332 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleCal1 GCA_963575255.1 NCBI PGDP_PleCal Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 50972 50975 13163 787 1246 Plecturocebus_cinerascens__Ashy_titi__HLpleCin1__GCA_963573415.1 Plecturocebus cinerascens Ashy titi Callicebus cinerascens 1812037 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleCin1 GCA_963573415.1 NCBI PGDP_PleCin Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 46753 46753 13046 801 1349 Plecturocebus_cupreus__Coppery_titi__HLpleCup1__GCA_040437455.1 Plecturocebus cupreus Coppery titi Callicebus cupreus,Callithrix cuprea 202457 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleCup1 GCA_040437455.1 NCBI PleCup_hybrid Chromosome 2024-07-02 Arizona State University 16955781 130776705 14853 317 26 Plecturocebus_donacophilus__Bolivian_titi__HLpleDon1__GCA_004027715.1 Plecturocebus donacophilus Bolivian titi white-eared titi,Callicebus moloch donacophilus,Bolivian gray titi,Callicebus donacophilus 230833 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleDon1 GCA_004027715.1 NCBI CalDon_v1_BIUU Scaffold 2019-01-16 Broad Institute 41149 46445 13186 809 1201 Plecturocebus_dubius__Primates__HLpleDub1__GCA_963575235.1 Plecturocebus dubius Primates 2946520 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleDub1 GCA_963575235.1 NCBI PGDP_PleDub Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 48896 48896 13080 797 1319 Plecturocebus_grovesi__Alta_Floresta_titi_monkey__HLpleGro1__GCA_963574625.1 Plecturocebus grovesi Alta Floresta titi monkey Plecturocebus sp. n. HB-2018 2488670 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleGro1 GCA_963574625.1 NCBI PGDP_PleGro Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 58159 58159 13346 759 1091 Plecturocebus_hoffmannsi__Hoffmanns_titi__HLpleHof1__GCA_963575245.1 Plecturocebus hoffmannsi Hoffmanns titi Callicebus hoffmannsi,Callicebus hoffmansi 78255 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleHof1 GCA_963575245.1 NCBI PGDP_PleHof Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 46107 46114 13055 825 1316 Plecturocebus_miltoni__Miltons_titi__HLpleMil1__GCA_963575275.1 Plecturocebus miltoni Miltons titi Callicebus miltoni 1812038 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleMil1 GCA_963575275.1 NCBI PGDP_PleMil Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 54303 54303 13251 789 1156 Plecturocebus_moloch__Red-bellied_titi__HLpleMol1__GCA_963574105.1 Plecturocebus moloch Red-bellied titi Dusky titi,Callicebus moloch 9523 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Callicebinae; Plecturocebus HLpleMol1 GCA_963574105.1 NCBI PGDP_PleMol Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 61113 61113 13445 708 1043 Cacajao_ayresi__Primates__HLcacAyr1__GCA_963573425.1 Cacajao ayresi Primates Cacajao sp. IPF-2008_ay 535896 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Cacajao HLcacAyr1 GCA_963573425.1 NCBI PGDP_CacAyr Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 76643 76643 13896 426 874 Cacajao_calvus__Bald_Uacari__HLcacCal1__GCA_963573955.1 Cacajao calvus Bald Uacari Simia calva,red uakari 30596 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Cacajao HLcacCal1 GCA_963573955.1 NCBI PGDP_CacCal Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 68772 68795 13722 482 992 Cacajao_hosomi__Primates__HLcacHos1__GCA_963573795.1 Cacajao hosomi Primates Cacajao sp. IPF-2008_ho 535897 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Cacajao HLcacHos1 GCA_963573795.1 NCBI PGDP_CacHos Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 71453 71457 13745 478 973 Cacajao_melanocephalus__Black-headed_Uacari__HLcacMel1__GCA_963573385.1 Cacajao melanocephalus Black-headed Uacari black uakari,Cacajao ouakary,Simia melanocephala 70825 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Cacajao HLcacMel1 GCA_963573385.1 NCBI PGDP_CacMel Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 71276 71282 13772 435 989 Chiropotes_israelita__Primates__HLchiIsr1__GCA_963573965.1 Chiropotes israelita Primates 280163 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Chiropotes HLchiIsr1 GCA_963573965.1 NCBI PGDP_ChiIsr Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 61605 61606 13600 427 1169 Chiropotes_sagulatus__Primates__HLchiSag1__GCA_963574175.1 Chiropotes sagulatus Primates Chiropotes chiropotes sagulata 3134011 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Chiropotes HLchiSag1 GCA_963574175.1 NCBI PGDP_ChiSag Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 53522 53527 13404 524 1268 Pithecia_mittermeieri__Mittermeiers_Tapajos_saki__HLpitMit1__GCA_963574975.1 Pithecia mittermeieri Mittermeiers Tapajos saki 2946517 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Pithecia HLpitMit1 GCA_963574975.1 NCBI PGDP_PitMit Scaffold 2023-11-02 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 46168 46168 13083 627 1486 Pithecia_pithecia__white-faced_saki__HLpitPit1__GCA_004026645.1 Pithecia pithecia white-faced saki Guianan saki 43777 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Pithecia HLpitPit1 GCA_004026645.1 NCBI PitPit_v1_BIUU Scaffold 2019-01-16 Broad Institute 63292 83104 14000 365 831 Pithecia_pithecia__white-faced_saki__HLpitPit2__GCA_023779675.1 Pithecia pithecia white-faced saki Guianan saki 43777 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Pithecia HLpitPit2 GCA_023779675.1 NCBI ASM2377967v1 Contig 2022-06-17 BGI-Shenzhen 10867430 10867430 9795 5369 32 Pithecia_vanzolinii__Vanzolinis_bald-faced_saki__HLpitVan1__GCA_963574005.1 Pithecia vanzolinii Vanzolinis bald-faced saki 2946519 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Pitheciidae; Pitheciinae; Pithecia HLpitVan1 GCA_963574005.1 NCBI PGDP_PitVan Scaffold 2023-11-01 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 44982 44982 13083 610 1503 Carlito_syrichta__Philippine_tarsier__tarSyr2__GCF_000164805.1 Carlito syrichta Philippine tarsier Tarsius syrichta 1868482 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito tarSyr2 GCF_000164805.1 NCBI Tarsius_syrichta-2.0.1 Scaffold 2013-09-18 Washington University (WashU) 38165 401181 13172 1064 960 Carlito_syrichta_fraterculus__Bohol_tarsier__HLcarSyriFra3A__GCA_059932695.1 Carlito syrichta fraterculus Bohol tarsier Philippine tarsier,Tarsius syrichta,Simia syrichta 3735306 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito; Carlito syrichta HLcarSyriFra3A GCA_059932695.1 NCBI mCarSyr1.hap1 Chromosome 2026-08-07 Vertebrate Genomes Project 10401877 86712982 14948 213 35 Cephalopachus_bancanus__Horsfields_tarsier__HLcepBan1__GCA_027257055.1 Cephalopachus bancanus Horsfields tarsier Tarsius bancanus,Western tarsier 9477 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Cephalopachus HLcepBan1 GCA_027257055.1 NCBI ASM2725705v1 Contig 2022-12-23 BGI 5252243 5252243 13655 1299 242 Daubentonia_madagascariensis__aye-aye__HLdauMad1__GCA_004027145.1 Daubentonia madagascariensis aye-aye 31869 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Chiromyiformes; Daubentoniidae; Daubentonia HLdauMad1 GCA_004027145.1 NCBI DauMad_v1_BIUU Scaffold 2019-01-16 Broad Institute 298834 379919 14918 153 125 Daubentonia_madagascariensis__aye-aye__HLdauMad2__GCA_023783475.1 Daubentonia madagascariensis aye-aye 31869 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Chiromyiformes; Daubentoniidae; Daubentonia HLdauMad2 GCA_023783475.1 NCBI ASM2378347v1 Contig 2022-06-17 BGI-Shenzhen 27954151 27954151 14439 719 38 Cheirogaleus_medius__Lesser_dwarf_lemur__HLcheMed1__GCA_008086735.1 Cheirogaleus medius Lesser dwarf lemur fat-tailed dwarf lemur 9460 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Cheirogaleus HLcheMed1 GCA_008086735.1 NCBI ASM808673v1 Scaffold 2019-08-26 Duke University 34905 48318266 12393 1010 1793 Microcebus_griseorufus__Reddish-gray_mouse_lemur__HLmicGri1__GCA_008750995.1 Microcebus griseorufus Reddish-gray mouse lemur 143354 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus HLmicGri1 GCA_008750995.1 NCBI Mgri_1.0 Scaffold 2019-09-30 Duke University 16653 16816 9097 1447 4652 Microcebus_lehilahytsara__Mittermeiers_mouse_lemur__HLmicMit1__GCA_008750955.1 Microcebus lehilahytsara Mittermeiers mouse lemur Microcebus mittermeieri 236274 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus HLmicMit1 GCA_008750955.1 NCBI Mmit_1.0 Scaffold 2019-09-30 Duke University 15314 15314 8969 1560 4667 Microcebus_murinus__Gray_mouse_lemur__HLmicMuri4A__GCF_040939455.1 Microcebus murinus Gray mouse lemur grey mouse lemur 30608 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus HLmicMuri4A GCF_040939455.1 NCBI M.murinus_Inina_mat1.0 Chromosome 2025-06-05 Stanford University 102817952 105226355 14950 166 80 Microcebus_ravelobensis__Golden_brown_mouse_lemur__HLmicRav1__GCA_008750975.1 Microcebus ravelobensis Golden brown mouse lemur 122231 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus HLmicRav1 GCA_008750975.1 NCBI Mrav_1.0 Scaffold 2019-09-30 Duke University 21473 21495 10758 933 3505 Microcebus_sp._3_GT-2019__unclassified_mouse_lemur__HLmicSpe31__GCA_008750915.1 Microcebus sp. 3 GT-2019 unclassified mouse lemur 2508170 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus HLmicSpe31 GCA_008750915.1 NCBI Mjon_1.0 Scaffold 2019-09-30 Duke University 38130 38968 11256 708 3232 Microcebus_tavaratra__Northern_rufous_mouse_lemur__HLmicTav1__GCA_008750935.1 Microcebus tavaratra Northern rufous mouse lemur 143351 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus HLmicTav1 GCA_008750935.1 NCBI Mtav_1.0 Scaffold 2019-09-30 Duke University 29527 30039 10561 896 3739 Microcebus_murinus__gray_mouse_lemur__micMur3__GCF_000165445.2 Microcebus murinus gray mouse lemur grey mouse lemur 30608 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus micMur3 GCF_000165445.2 NCBI Mmur_3.0 Chromosome 2017-02-06 Baylor College of Medicine 210702 108171978 14087 947 162 Mirza_coquereli__Coquerels_mouse_lemur__HLmirCoq1__GCA_004024645.1 Mirza coquereli Coquerels mouse lemur Microcebus coquereli 47180 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Mirza HLmirCoq1 GCA_004024645.1 NCBI MizCoq_v1_BIUU Scaffold 2019-01-15 Broad Institute 60596 79947 13615 451 1130 Mirza_zaza__Northern_giant_mouse_lemur__HLmirZaz1__GCA_008750895.1 Mirza zaza Northern giant mouse lemur 339999 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Mirza HLmirZaz1 GCA_008750895.1 NCBI Mzaz_1.0 Scaffold 2019-09-30 Duke University 73499 75843 12277 555 2364 Indri_indri__Indri__HLindInd1__GCA_004363605.1 Indri indri Indri 34827 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Indri HLindInd1 GCA_004363605.1 NCBI IndInd_v1_BIUU Scaffold 2019-03-22 Broad Institute 26447 28620 12810 879 1507 Propithecus_coquereli__Coquerels_sifaka__HLproCoq2 Propithecus coquereli Coquerels sifaka Propithecus verreauxi coquereli 379532 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus HLproCoq2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-02 15309 148766566 14018 362 816 Eulemur_coronatus__Crowned_lemur__HLeulCoro1__GCA_963574965.1 Eulemur coronatus Crowned lemur Lemur coronatus 13514 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur HLeulCoro1 GCA_963574965.1 NCBI PGDP_EulCor Scaffold 2023-10-30 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 44663 44663 13483 494 1219 Eulemur_flavifrons__Sclaters_lemur__HLeulFla1 Eulemur flavifrons Sclaters lemur Eulemur macaco flavifrons 87288 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur HLeulFla1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-01 26840 156661540 14375 642 179 Eulemur_fulvus__brown_lemur__HLeulFul1__GCA_004027275.1 Eulemur fulvus brown lemur Lemur fulvus,Petterus fulvus 13515 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur HLeulFul1 GCA_004027275.1 NCBI EulFul_v1_BIUU Scaffold 2019-01-16 Broad Institute 21310 22561 12595 953 1648 Eulemur_mongoz__mongoose_lemur__HLeulMon1 Eulemur mongoz mongoose lemur Lemur mongoz 34828 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur HLeulMon1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-08 37662 82429097 13141 747 1308 Eulemur_rufifrons__Bennetts_brown_lemur__HLeulRuf1__GCA_041146395.1 Eulemur rufifrons Bennetts brown lemur 859984 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur HLeulRuf1 GCA_041146395.1 NCBI OSU_ERuf_1 Chromosome 2024-08-16 Oregon State University 89959899 100874195 15059 108 29 Eulemur_macaco__black_lemur__eulMac1__GCA_001262655.1 Eulemur macaco black lemur Petterus macaco,Lemur macaco 30602 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur eulMac1 GCA_001262655.1 NCBI Emacaco_refEf_BWA_oneround Scaffold 2015-08-06 University of Chicago 20038 405987 14395 608 193 Eulemur_fulvus_collaris__brown_lemur__HLeulCol1 Eulemur fulvus collaris brown lemur Lemur fulvus,Petterus fulvus,Eulemur collaris 47178 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Eulemur; Eulemur fulvus HLeulCol1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-11 43549 109878484 13568 542 1086 Hapalemur_alaotrensis__Lac_Alaotra_bamboo_lemur__HLhapAlao1__GCA_963574485.1 Hapalemur alaotrensis Lac Alaotra bamboo lemur Hapalemur griseus alaotrensis 3370048 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Hapalemur HLhapAlao1 GCA_963574485.1 NCBI PGDP_HapAla Scaffold 2023-10-30 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 36188 36188 13082 453 1661 Lemur_catta__Ring-tailed_lemur__HLlemCat1__GCA_004024665.1 Lemur catta Ring-tailed lemur 9447 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur HLlemCat1 GCA_004024665.1 NCBI LemCat_v1_BIUU Scaffold 2019-01-15 Broad Institute 158439 215715 14555 297 344 Lemur_catta__Ring-tailed_lemur__HLlemCat2__GCF_020740605.2 Lemur catta Ring-tailed lemur 9447 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur HLlemCat2 GCF_020740605.2 NCBI mLemCat1.pri Chromosome 2021-11-04 Vertebrate Genomes Project 32529614 102162704 14820 338 38 Prolemur_simus__greater_bamboo_lemur__HLproSim1__GCA_003258685.1 Prolemur simus greater bamboo lemur Hapalemur simus,broad-nosed bamboo lemur 1328070 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Prolemur HLproSim1 GCA_003258685.1 NCBI Prosim_1.0 Scaffold 2018-06-20 Henry Doorly Zoo & Aquarium 47757 2710671 14867 191 138 Varecia_variegata__ruffed_lemur__HLvarVar1__GCA_028533085.1 Varecia variegata ruffed lemur variegated lemur,Lemur variegatus 9455 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Varecia HLvarVar1 GCA_028533085.1 NCBI Varecia_variegata_HiC Chromosome 2023-02-10 DNA Zoo 40155 128811464 13214 665 1317 Galago_moholi__Moholi_bushbaby__HLgalMoh1__GCA_023783435.1 Galago moholi Moholi bushbaby Galago senegalensis moholi,South African galago 30609 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Galago HLgalMoh1 GCA_023783435.1 NCBI ASM2378343v1 Contig 2022-06-17 BGI-Shenzhen 583552 583552 12907 1663 626 Galago_senegalensis__Senegal_galago__HLgalSen1__GCA_963575145.1 Galago senegalensis Senegal galago northern lesser bushbaby 9465 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Galago HLgalSen1 GCA_963575145.1 NCBI PGDP_GalSen Scaffold 2023-10-31 IBE(CSIC-UNIVERSITAT POMPEU FABRA) 30883 30883 12176 754 2266 Otolemur_crassicaudatus__thick-tailed_bush_baby__HLotoCra1 Otolemur crassicaudatus thick-tailed bush baby thick-tailed galago,Galago crassicaudatus,greater galago 9463 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur HLotoCra1 DNA Zoo Consortium DNA Zoo Consortium 2022-05-23 73053 91872397 14023 469 704 Otolemur_garnettii__small-eared_galago__otoGar3__GCF_000181295.1 Otolemur garnettii small-eared galago Galago garnetti,Galago garnettii 30611 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur otoGar3 GCF_000181295.1 NCBI OtoGar3 Scaffold 2011-03-16 Broad Institute of MIT and Harvard, USA, Cambridge 27100 13852661 14582 331 283 Loris_tardigradus__slender_loris__HLlorTar1__GCA_023783135.1 Loris tardigradus slender loris 9468 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Lorisidae; Loris HLlorTar1 GCA_023783135.1 NCBI ASM2378313v1 Contig 2022-06-17 BGI-Shenzhen 7727436 7727436 13826 1301 69 Nycticebus_bengalensis__Bengal_slow_loris__HLnycBen1__GCA_023898255.1 Nycticebus bengalensis Bengal slow loris 261741 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Lorisidae; Nycticebus HLnycBen1 GCA_023898255.1 NCBI ASM2389825v1 Chromosome 2022-06-27 BGI-Shenzhen 19794679 128767214 11322 3811 63 Nycticebus_coucang__slow_loris__HLnycCou2__GCF_027406575.1 Nycticebus coucang slow loris Tardigradus coucang 9470 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Lorisidae; Nycticebus HLnycCou2 GCF_027406575.1 NCBI mNycCou1.pri Chromosome 2022-12-28 Vertebrate Genomes Project 41197715 135917784 15024 163 9 Xanthonycticebus_pygmaeus__pygmy_slow_loris__HLxanPyg1 Xanthonycticebus pygmaeus pygmy slow loris Nycticebus intermedius,Nycticebus pygmaeus 101278 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Lorisidae; Xanthonycticebus HLxanPyg1 ngdc.cncb.ac.cn/bioproject/browse/PRJCA003786 https://ngdc.cncb.ac.cn/bioproject/browse/PRJCA003786 2023-06-06 4739222 4739222 11190 3729 277 Tupaia_chinensis__Chinese_tree_shrew__HLtupChi2__GCA_033439345.1 Tupaia chinensis Chinese tree shrew Tupaia belangeri chinensis 246437 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia HLtupChi2 GCA_033439345.1 NCBI KIZ version 2 Chromosome 2023-11-09 Kunming Institution of Zoology, CAS 3217288 104643080 13175 1907 114 Tupaia_tana__large_tree_shrew__HLtupTan1__GCA_026018925.1 Tupaia tana large tree shrew 70687 Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia HLtupTan1 GCA_026018925.1 NCBI, JoanaDamas 2021-06-15 7425133 112954644 14473 661 62 Antilocapra_americana__pronghorn__HLantAme1__GCA_007570785.1 Antilocapra americana pronghorn 9891 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Antilocapridae; Antilocapra HLantAme1 GCA_007570785.1 NCBI GSC_phorn_1.0 Scaffold 2019-07-12 Canada's Genomic Enterprise 220431 18739554 14782 317 97 Aepyceros_melampus__impala__HLaepMel1__GCA_006408695.1 Aepyceros melampus impala 9897 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Aepycerotinae; Aepyceros HLaepMel1 GCA_006408695.1 NCBI IMP Scaffold 2019-06-24 Northwestern Polytechnical University 82459 344542 5165 9618 413 Beatragus_hunteri__Hirola__HLbeaHun1__GCA_004027495.1 Beatragus hunteri Hirola 59527 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Alcelaphinae; Beatragus HLbeaHun1 GCA_004027495.1 NCBI BeaHun_v1_BIUU Scaffold 2019-01-16 Broad Institute 57444 69303 14207 389 600 Connochaetes_taurinus__brindled_gnu__HLconTau2 Connochaetes taurinus brindled gnu white-bearded gnu,blue wildebeest 9927 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Alcelaphinae; Connochaetes HLconTau2 DNA Zoo Consortium DNA Zoo Consortium 2020-07-31 68346 98098359 14051 846 299 Damaliscus_lunatus__topi__HLdamLun1__GCA_006408505.1 Damaliscus lunatus topi 9929 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Alcelaphinae; Damaliscus HLdamLun1 GCA_006408505.1 NCBI CTB Scaffold 2019-06-24 Northwestern Polytechnical University 38843 1166796 14375 420 401 Antidorcas_marsupialis__springbok__HLantMar1__GCA_006408585.1 Antidorcas marsupialis springbok 59523 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Antidorcas HLantMar1 GCA_006408585.1 NCBI SGB Scaffold 2019-06-24 Northwestern Polytechnical University 42749 694905 12770 1222 1204 Eudorcas_thomsonii__Thomsons_gazelle__HLeudTho1__GCA_006408755.1 Eudorcas thomsonii Thomsons gazelle Gazella thomsonii,Eudorcas rufifrons thomsonii,Gazella rufifrons thomsonii,Gazella thomsoni 69308 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Eudorcas HLeudTho1 GCA_006408755.1 NCBI TMG Scaffold 2019-06-24 Northwestern Polytechnical University 137476 1581717 14183 732 281 Litocranius_walleri__gerenuk__HLlitWal2 Litocranius walleri gerenuk 69311 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Litocranius HLlitWal2 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 59467 100165937 14354 648 194 Madoqua_kirkii__Kirks_dik-dik__HLmadKir1__GCA_006408675.1 Madoqua kirkii Kirks dik-dik Madoqua kirki 66434 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Madoqua HLmadKir1 GCA_006408675.1 NCBI KDD Scaffold 2019-06-24 Northwestern Polytechnical University 27722 27730 5922 7875 1399 Nanger_dama__Dama_gazelle__HLnanDam2__GCA_917880005.1 Nanger dama Dama gazelle Gazella dama 67940 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Nanger HLnanDam2 GCA_917880005.1 NCBI ORGONE_02 Scaffold 2021-11-18 IBE (Institut de Biologia Evolutiva) 37125998 37125998 4462 10715 19 Nanger_granti__Grants_gazelle__HLnanGra1__GCA_006408635.1 Nanger granti Grants gazelle Gazella granti 27591 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Nanger HLnanGra1 GCA_006408635.1 NCBI GTG Scaffold 2019-06-24 Northwestern Polytechnical University 7454 528456 12916 817 1463 Nanger_dama_ruficollis__Dama_gazelle__HLnanDamRuf3 Nanger dama ruficollis Dama gazelle Gazella dama,Gazella dama ruficollis 67941 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Nanger; Nanger dama HLnanDamRuf3 DNA Zoo Consortium DNA Zoo Consortium 2022-05-30 549883 156272796 14782 311 103 Neotragus_moschatus__suni__HLneoMos1__GCA_006410615.1 Neotragus moschatus suni 66442 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Neotragus HLneoMos1 GCA_006410615.1 NCBI SUN Scaffold 2019-06-24 Northwestern Polytechnical University 59277 952090 10295 3398 1503 Neotragus_pygmaeus__royal_antelope__HLneoPyg1__GCA_006410875.1 Neotragus pygmaeus royal antelope 1027985 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Neotragus HLneoPyg1 GCA_006410875.1 NCBI RAL Scaffold 2019-06-24 Northwestern Polytechnical University 30751 363895 9271 3622 2303 Oreotragus_oreotragus__klipspringer__HLoreOre1__GCA_006410675.1 Oreotragus oreotragus klipspringer 66444 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Oreotragus HLoreOre1 GCA_006410675.1 NCBI KSP Scaffold 2019-06-24 Northwestern Polytechnical University 42127 339390 12498 1172 1526 Pantholops_hodgsonii__Chiru__HLpanHodg2__GCA_040182635.1 Pantholops hodgsonii Chiru Tibetan antelope,Pantholops hodgsoni 59538 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Pantholops HLpanHodg2 GCA_040182635.1 NCBI NWIPB_Pahodg_1.0 Chromosome 2024-06-17 Northwest Institute of Plateau Biology, Chinese Academy of Sciences 84561976 92232156 15001 185 10 Pantholops_hodgsonii__chiru__panHod1__GCF_000400835.1 Pantholops hodgsonii chiru Tibetan antelope,Pantholops hodgsoni 59538 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Pantholops panHod1 GCF_000400835.1 NCBI PHO1.0 Scaffold 2013-05-28 BGI 18674 2772860 13170 1659 367 Procapra_przewalskii__Przewalskis_gazelle__HLproPrz1__GCA_006410515.1 Procapra przewalskii Przewalskis gazelle 157668 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Procapra HLproPrz1 GCA_006410515.1 NCBI PLG Scaffold 2019-06-24 Northwestern Polytechnical University 10405 5522907 13287 1137 772 Raphicerus_campestris__steenbok__HLrapCam1__GCA_006410735.1 Raphicerus campestris steenbok 59544 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Raphicerus HLrapCam1 GCA_006410735.1 NCBI SNB Scaffold 2019-06-24 Northwestern Polytechnical University 25050 537161 10266 2593 2337 Saiga_tatarica__saiga_antelope__HLsaiTat1__GCA_004024985.1 Saiga tatarica saiga antelope 34875 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Antilopinae; Saiga HLsaiTat1 GCA_004024985.1 NCBI SaiTat_v1_BIUU Scaffold 2019-01-15 Broad Institute 6406 6453 7433 2730 5033 Bison_bonasus__European_bison__HLbisBon1__GCA_963879515.1 Bison bonasus European bison Bison bison bonasus,Bos bonasus,bison,wisent 9902 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison HLbisBon1 GCA_963879515.1 NCBI ETH_BisBon1 Scaffold 2023-12-17 ETH ZURICH 91242619 104743180 15036 154 6 Bison_bison_bison__American_bison__HLbisBisBis2 Bison bison bison American bison Bos (Bison) bison,Bos bison bison,Bison 43346 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison; Bison bison HLbisBisBis2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-19 18165 101686351 13194 1461 541 Bos_frontalis__gayal__HLbosFro1__GCA_007844835.1 Bos frontalis gayal mithun,Bos gaurus frontalis 30520 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosFro1 GCA_007844835.1 NCBI NRC_Mithun_1 Scaffold 2019-08-05 NRC on Mithun ICAR 28709 1003348 13519 988 689 Bos_gaurus__gaur__HLbosGau1__GCA_014182915.1 Bos gaurus gaur seladang 9904 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosGau1 GCA_014182915.1 NCBI ARS_UOA_Gaur_1 Chromosome 2020-08-13 USDA, ARS, USMARC 13340585 104471907 13203 1973 20 Bos_grunniens__domestic_yak__HLbosGru1__GCA_005887515.2 Bos grunniens domestic yak Bos mutus grunniens,yak,Peophagus grunniens 30521 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosGru1 GCA_005887515.2 NCBI BosGru3.0 Chromosome 2019-06-10 Lanzhou University 44716738 114386978 12126 2833 237 Bos_grunniens__Domestic_yak__HLbosGrun2__GCA_055505025.1 Bos grunniens Domestic yak yak,Bos mutus grunniens,Peophagus grunniens 30521 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosGrun2 GCA_055505025.1 NCBI Bosgru_T2T1.0 Chromosome 2026-02-24 Chinese Academy of Agricultural Sciences 93513064 105134596 14989 174 33 Bos_indicus__zebu_cattle__HLbosInd2__GCA_002933975.1 Bos indicus zebu cattle zebu,Bos primigenius indicus 9915 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosInd2 GCA_002933975.1 NCBI ASM293397v1 Chromosome 2018-02-22 Anand Agricultural University 64498 104295553 14391 419 386 Bos_indicus__Zebu_cattle__HLbosIndi3__GCF_029378745.1 Bos indicus Zebu cattle Bos primigenius indicus,Indicine cattle,Bos taurus indicus,zebu 9915 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosIndi3 GCF_029378745.1 NCBI NIAB-ARS_B.indTharparkar_mat_pri_1.0 Chromosome 2023-03-24 USDA ARS, NIAB 42080189 104596815 15051 140 5 Bos_javanicus__banteng__HLbosJav1__GCF_032452875.1 Bos javanicus banteng wild banteng,Bos banteng,Bos sondaicus 9906 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosJav1 GCF_032452875.1 NCBI ARS-OSU_banteng_1.0 Chromosome 2023-10-11 Ruminant T2T Consortium 47146240 87549292 15059 137 0 Bos_mutus__wild_yak__HLbosMut2__GCA_007646595.3 Bos mutus wild yak Poephagus mutus,Bos grunniens mutus 72004 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosMut2 GCA_007646595.3 NCBI ASM764659v3 Scaffold 2019-10-21 Lanzhou University 90625 16589160 14618 433 145 Bos_taurus__cattle__HLbosTau10__GCF_002263795.3 Bos taurus cattle domestic cow,bovine,Bos bovis,cow,dairy cow,domestic cattle,ox,Bovidae sp. Adi Nefas,Bos primigenius taurus 9913 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosTau10 GCF_002263795.3 NCBI ARS-UCD2.0 Chromosome 2023-07-01 USDA ARS 26402946 103308737 14894 299 3 Bos_taurus__cattle__bosTau9__GCF_002263795.1 Bos taurus cattle dairy cow,Bos bovis,domestic cow,cow,Bos primigenius taurus,bovine,Bovidae sp. Adi Nefas,domestic cattle 9913 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos bosTau9 GCF_002263795.1 NCBI ARS-UCD1.2 Chromosome 2018-04-11 USDA ARS 25896116 103308737 14904 289 3 Bos_indicus_x_Bos_taurus__Hybrid_cattle__HLbosIndiX1__GCF_003369695.1 Bos indicus x Bos taurus Hybrid cattle hybrid cow,Bos primigenius indicus x Bos primigenius taurus,Bos taurus indicus x Bos taurus taurus 30522 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos HLbosIndiX1 GCF_003369695.1 NCBI UOA_Brahman_1 Chromosome 2018-11-30 University of Adelaide 26764281 104466507 14884 266 46 Bubalus_bubalis__water_buffalo__HLbubBub2__GCA_003121395.1 Bubalus bubalis water buffalo Bubalus arnee bubalis,river buffalo,Bubalus arnee,domestic water buffalo 89462 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus HLbubBub2 GCA_003121395.1 NCBI UOA_WB_1 Chromosome 2018-05-14 University of Adelaide 22441509 117219835 14125 1066 5 Bubalus_depressicornis__lowland_anoa__HLbubDep1__GCA_025584935.1 Bubalus depressicornis lowland anoa Bubalus depressicornis depressicornis,Anoa depressicornis,anoa,Bubalus depressicornis fergusoni,Bubalus depressicornis ferqusoni 27596 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus HLbubDep1 GCA_025584935.1 NCBI MNHNYannick_LA_1 Scaffold 2022-10-05 Museum national d'Histoire naturelle 34173 37876 13906 464 826 Bubalus_kerabau__carabao__HLbubKer1__GCF_029407905.1 Bubalus kerabau carabao Bubalus bubalis carabanesis,Bubalus carabanensis carabanensis,swamp type water buffalo,Bubalus arnee carabanensis,Bubalus carabanensis 3119969 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bubalus HLbubKer1 GCF_029407905.1 NCBI PCC_UOA_SB_1v2 Chromosome 2023-03-31 University of Adelaide 91172394 121846921 15051 142 3 Pseudoryx_nghetinhensis__Saola__HLpseNghe1__GCA_050436925.1 Pseudoryx nghetinhensis Saola 97363 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Pseudoryx HLpseNghe1 GCA_050436925.1 NCBI ASM5043692v1 Scaffold 2025-05-19 University of copenhagen 97716 78206318 14717 401 78 Syncerus_caffer__African_buffalo__HLsynCaf1__GCA_902500845.1 Syncerus caffer African buffalo 9970 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Syncerus HLsynCaf1 GCA_902500845.1 NCBI africanbuffalo Scaffold 2019-11-26 ABER 2018310 69160875 13155 1979 62 Tragelaphus_imberbis__lesser_kudu__HLtraImb1__GCA_006410775.1 Tragelaphus imberbis lesser kudu 9947 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Tragelaphus HLtraImb1 GCA_006410775.1 NCBI LEK Scaffold 2019-06-24 Northwestern Polytechnical University 12858 1775046 9004 2672 3520 Tragelaphus_scriptus__bushbuck__HLtraScr1__GCA_006410495.1 Tragelaphus scriptus bushbuck 66440 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Tragelaphus HLtraScr1 GCA_006410495.1 NCBI BUB Scaffold 2019-06-24 Northwestern Polytechnical University 28350 890554 9947 2325 2924 Tragelaphus_strepsiceros__greater_kudu__HLtraStr1__GCA_006410795.1 Tragelaphus strepsiceros greater kudu 9946 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Tragelaphus HLtraStr1 GCA_006410795.1 NCBI GTK Scaffold 2019-06-24 Northwestern Polytechnical University 33649 511483 12214 1384 1598 Tragelaphus_eurycerus_isaaci__mountain_bongo__HLtraEurIsa1 Tragelaphus eurycerus isaaci mountain bongo eastern bongo,bongo,Tragelaphus euryceros 2878564 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Tragelaphus; Tragelaphus eurycerus HLtraEurIsa1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-13 90994 192009155 14713 299 184 Ammotragus_lervia__aoudad__HLammLer1__GCA_002201775.1 Ammotragus lervia aoudad Barbary sheep 9899 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ammotragus HLammLer1 GCA_002201775.1 NCBI ALER1.0 Scaffold 2017-06-20 Northwest A&F University 52017 1301762 14840 230 126 Budorcas_taxicolor__takin__HLbudTax1__GCA_023091745.1 Budorcas taxicolor takin 37181 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Budorcas HLbudTax1 GCA_023091745.1 NCBI Takin1.0 Chromosome 2022-04-22 Northwest A&F University 64431831 101265939 15031 160 5 Capra_aegagrus__wild_goat__HLcapAeg1__GCA_000765075.1 Capra aegagrus wild goat Capra hircus aegagrus,bezoar ibex 9923 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapAeg1 GCA_000765075.1 NCBI Caeg1 Scaffold 2014-07-15 EBI 51868 1750063 14928 208 60 Capra_hircus__goat__HLcapHir2__GCA_001704415.1 Capra hircus goat goats,Naine d'Afrique de l'Ouest,African dwarf goats,African dwarf goat,Capra aegagrus hircus,domestic goat 9925 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapHir2 GCA_001704415.1 NCBI ARS1 Chromosome 2016-08-24 USDA ARS 26244591 87277232 14809 352 35 Capra_hircus__Goat__HLcapHirc3__GCA_041735815.1 Capra hircus Goat Capra aegagrus hircus,African dwarf goats,Naine d'Afrique de l'Ouest,African dwarf goat,domestic goat,goats 9925 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapHirc3 GCA_041735815.1 NCBI T2T-goat2.0 Complete Genome 2024-09-04 China Agricultural University 100793790 100793790 15057 135 4 Capra_ibex__Alpine_ibex__HLcapIbe1__GCA_006410555.1 Capra ibex Alpine ibex ibex 72542 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapIbe1 GCA_006410555.1 NCBI IBX Scaffold 2019-06-24 Northwestern Polytechnical University 380983 61905114 7701 4065 3430 Capra_ibex__Alpine_ibex__HLcapIbex2__GCA_054642885.1 Capra ibex Alpine ibex ibex 72542 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapIbex2 GCA_054642885.1 NCBI CapIbe1.0 Chromosome 2026-01-07 Istituto Italiano di Tecnologia 58703036 101249638 14945 243 8 Capra_nubiana__Nubian_ibex__HLcapNubi1A__GCA_054855995.1 Capra nubiana Nubian ibex Capra ibex nubiana,Capra nubiana nubiana 72543 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapNubi1A GCA_054855995.1 NCBI mCapNub1.hap1 Chromosome 2026-01-30 Vertebrate Genomes Project 91324156 95383454 15059 126 11 Capra_sibirica__Siberian_ibex__HLcapSib1__GCA_003182615.2 Capra sibirica Siberian ibex Capra ibex sibericus,Capra ibex sibirica,Capra sibirica sibirica 72544 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra HLcapSib1 GCA_003182615.2 NCBI ASM318261v2 Scaffold 2018-10-30 Northwest A&F University 376582 15190720 14977 195 24 Capricornis_sumatraensis__Sumatran_serow__HLcapSum1__GCF_032405125.1 Capricornis sumatraensis Sumatran serow Naemorhedus sumatraensis,Capricornis sumatrensis,Antilope sumatraensis 34865 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capricornis HLcapSum1 GCF_032405125.1 NCBI serow.2 Chromosome 2024-03-13 Northwest A&F University 100934918 112748084 15032 154 10 Nilgiritragus_hylocrius__Nilgiri_tahr__HLhemHyl1__GCA_004026825.1 Nilgiritragus hylocrius Nilgiri tahr Hemitragus hylocrius 330464 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Nilgiritragus HLhemHyl1 GCA_004026825.1 NCBI HemHyl_v1_BIUU Scaffold 2019-01-16 Broad Institute 66552 85340 14357 337 502 Oreamnos_americanus__mountain_goat__HLoreAme1__GCA_009758055.1 Oreamnos americanus mountain goat Rocky Mountain goat 34873 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Oreamnos HLoreAme1 GCA_009758055.1 NCBI ASM975805v1 Scaffold 2019-12-16 Trent University 24510 66616962 12166 1087 1943 Ovibos_moschatus__muskox__HLoviMos1__GCA_022533635.2 Ovibos moschatus muskox musk-ox,musk ox 37176 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovibos HLoviMos1 GCA_022533635.2 NCBI ASM2253363v2 Scaffold 2022-05-16 Trent University 38369 13200690 14169 1002 25 Ovis_ammon__argali__HLoviAmm1__GCA_003121645.1 Ovis ammon argali 30527 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviAmm1 GCA_003121645.1 NCBI O_ammon_KGZ_v1.0 Scaffold 2018-05-11 Northwest A&F University 151569 72289505 8682 3448 3066 Ovis_aries__sheep__HLoviAri6__GCF_016772045.2 Ovis aries sheep Ovis ovis,Ovis orientalis aries,domestic sheep,lambs,Ovis ammon aries,wild sheep 9940 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviAri6 GCF_016772045.2 NCBI ARS-UI_Ramb_v3.0 Chromosome 2023-07-20 University of Idaho 43178051 101274418 14998 192 6 Ovis_aries__Sheep__HLoviArie7__GCA_040805955.1 Ovis aries Sheep lambs,domestic sheep,wild sheep,Ovis orientalis aries,Ovis ammon aries,Ovis ovis 9940 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviArie7 GCA_040805955.1 NCBI T2T-sheep1.0 Complete Genome 2024-07-22 China Agricultural University 103395564 103395564 15042 145 9 Ovis_canadensis__bighorn_sheep__HLoviCan2__GCA_004026945.1 Ovis canadensis bighorn sheep 37174 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviCan2 GCA_004026945.1 NCBI OviCan_v1_BIUU Scaffold 2019-01-16 Broad Institute 55973 69397 14044 477 675 Ovis_canadensis__Bighorn_sheep__HLoviCana3__GCF_042477335.2 Ovis canadensis Bighorn sheep 37174 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviCana3 GCF_042477335.2 NCBI ARS-UI_OviCan_v2 Chromosome 2024-10-18 Sheep Pangenome 105224494 105224494 15055 135 6 Ovis_orientalis__Asiatic_mouflon__HLoviOri1__GCA_014523465.1 Ovis orientalis Asiatic mouflon Ovis aries orientalis 469796 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviOri1 GCA_014523465.1 NCBI CAU_Oori_1.0 Chromosome 2020-09-10 INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES 42163491 103690580 15036 155 5 Ovis_vignei__Urial__HLoviVign1__GCA_053525375.1 Ovis vignei Urial Ovis aries vignei,Ovis orientalis vignei 59896 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis HLoviVign1 GCA_053525375.1 NCBI ASM5352537v1 Contig 2025-11-18 Yunnan agricultural university 28881536 28881536 12861 2259 76 Ovis_ammon_polii__Argali__HLoviAmmoPol2__GCA_028583565.1 Ovis ammon polii Argali Capra ammon 230172 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis ammon HLoviAmmoPol2 GCA_028583565.1 NCBI CAU_O.ammon polii_1.0 Chromosome 2023-02-10 China Agricultural University 74870268 102356453 15051 139 6 Ovis_nivicola_lydekkeri__snow_sheep__HLoviNivLyd1__GCA_903231385.1 Ovis nivicola lydekkeri snow sheep Ovis canadensis nivicola 1867112 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis nivicola HLoviNivLyd1 GCA_903231385.1 NCBI OvNiv1.0 Scaffold 2020-06-16 LMU Munich 1765443 2011554 11573 3511 112 Pseudois_nayaur__Bharal__HLpseNaya1__GCA_003182575.1 Pseudois nayaur Bharal Himalayan blue sheep 59542 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Pseudois HLpseNaya1 GCA_003182575.1 NCBI ASM318257v1 Scaffold 2018-05-31 Northwest A&F University 20979 21385 13049 472 1675 Rupicapra_rupicapra__Chamois__HLrupRup1__GCA_963981305.1 Rupicapra rupicapra Chamois Capra rupicapra 34869 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Rupicapra HLrupRup1 GCA_963981305.1 NCBI mRupRup1.1 Chromosome 2024-03-10 Centro Nacional de AnĂ¡lisis GenĂ³mico 77662214 100920001 15044 144 8 Cephalophula_zebra__Zebra_duiker__HLcepZebr1A__GCA_054099735.1 Cephalophula zebra Zebra duiker Cephalophus zebra 129233 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Cephalophinae; Cephalophula HLcepZebr1A GCA_054099735.1 NCBI mCepZeb1.hap1 Chromosome 2025-12-18 Vertebrate Genomes Project 65811789 117253595 15044 142 10 Cephalophus_harveyi__Harveys_duiker__HLcepHar1__GCA_006410635.1 Cephalophus harveyi Harveys duiker 129224 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Cephalophinae; Cephalophus HLcepHar1 GCA_006410635.1 NCBI HVD Scaffold 2019-06-24 Northwestern Polytechnical University 61368 365466 13890 841 465 Philantomba_maxwellii__Maxwells_duiker__HLphiMax1__GCA_006410695.1 Philantomba maxwellii Maxwells duiker Cephalophus maxwellii,Philantomba maxwelli 907741 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Cephalophinae; Philantomba HLphiMax1 GCA_006410695.1 NCBI MXD Scaffold 2019-06-24 Northwestern Polytechnical University 11377 383899 8823 2140 4233 Sylvicapra_grimmia__bush_duiker__HLsylGri1__GCA_006408735.1 Sylvicapra grimmia bush duiker 119562 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Cephalophinae; Sylvicapra HLsylGri1 GCA_006408735.1 NCBI CMD Scaffold 2019-06-24 Northwestern Polytechnical University 9720 583330 10734 1364 3098 Addax_nasomaculatus__Addax__HLaddNas1__GCA_019593525.1 Addax nasomaculatus Addax 59515 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Addax HLaddNas1 GCA_019593525.1 NCBI ASM1959352v1 Scaffold 2021-08-13 University of Potsdam 17026 20757513 13806 861 529 Hippotragus_equinus__roan_antelope__HLhipEqu1__GCA_016433095.1 Hippotragus equinus roan antelope 37186 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Hippotragus HLhipEqu1 GCA_016433095.1 NCBI ASM1643309v1 Scaffold 2020-12-29 CIBIO, University of Porto 237164 8357620 14652 367 177 Hippotragus_niger_niger__sable_antelope__HLhipNigNig2 Hippotragus niger niger sable antelope 82127 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Hippotragus; Hippotragus niger HLhipNigNig2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-05 44843 100235793 14704 427 65 Oryx_dammah__scimitar-horned_oryx__HLoryDam1 Oryx dammah scimitar-horned oryx 59534 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx HLoryDam1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-13 369170 100398400 14880 255 61 Oryx_gazella__gemsbok__HLoryGaz1__GCA_003945745.1 Oryx gazella gemsbok 9958 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx HLoryGaz1 GCA_003945745.1 NCBI UCDavis_Ogaz_1 Scaffold 2018-12-14 University of California Davis 19498 1579191 13115 1741 340 Kobus_ellipsiprymnus__waterbuck__HLkobEll1__GCA_006410655.1 Kobus ellipsiprymnus waterbuck 9962 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Reduncinae; Kobus HLkobEll1 GCA_006410655.1 NCBI DFW Scaffold 2019-06-24 Northwestern Polytechnical University 26169 779552 14244 560 392 Kobus_leche_leche__lechwe__HLkobLecLec1__GCA_014926565.1 Kobus leche leche lechwe 91880 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Reduncinae; Kobus; Kobus leche HLkobLecLec1 GCA_014926565.1 NCBI Klec_v1.0 Scaffold 2020-10-23 Kunming Institute of Zoology 66923 3233651 13782 945 469 Redunca_redunca__Bohar_reedbuck__HLredRed1__GCA_006410935.1 Redunca redunca Bohar reedbuck 59556 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Reduncinae; Redunca HLredRed1 GCA_006410935.1 NCBI BHR Scaffold 2019-06-24 Northwestern Polytechnical University 39282 423407 10795 2005 2396 Axis_porcinus__Hog_deer__HLaxiPor1__GCA_003798545.1 Axis porcinus Hog deer Cervus porcinus 57737 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Axis HLaxiPor1 GCA_003798545.1 NCBI ASM379854v1 Scaffold 2018-11-20 Novogene Bioinformatics Technology Corporation 172761 20764858 14847 271 78 Axis_porcinus__Hog_deer__HLaxiPorc2A__GCA_054883215.1 Axis porcinus Hog deer Cervus porcinus 57737 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Axis HLaxiPorc2A GCA_054883215.1 NCBI mAxiPor1.hap1 Chromosome 2026-01-30 Vertebrate Genomes Project 54160790 81775362 14969 183 44 Cervus_canadensis__elk__HLcerCan1__GCF_019320065.1 Cervus canadensis elk,wapiti 1574408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus HLcerCan1 GCF_019320065.1 NCBI ASM1932006v1 Chromosome 2021-07-26 Iowa State University 914577 77654944 14804 327 65 Cervus_elaphus__red_deer__HLcerEla2__GCF_910594005.1 Cervus elaphus red deer 9860 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus HLcerEla2 GCF_910594005.1 NCBI mCerEla1.1 Chromosome 2021-07-07 WELLCOME SANGER INSTITUTE 68741660 83473711 15017 175 4 Cervus_nippon__Sika_deer__HLcerNip1__GCA_040085125.1 Cervus nippon Sika deer 9863 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus HLcerNip1 GCA_040085125.1 NCBI ASM4008512v1 Chromosome 2024-06-07 Northeast Forestry University 89550226 89550226 14706 485 5 Cervus_albirostris__white-lipped_deer__HLprzAlb1__GCA_006408465.1 Cervus albirostris white-lipped deer Przewalskium albirostris 1088058 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus HLprzAlb1 GCA_006408465.1 NCBI WLD Scaffold 2019-06-24 Northwestern Polytechnical University 39627 3769372 14025 688 483 Cervus_albirostris__White-lipped_deer__HLprzAlb2__GCA_046563475.1 Cervus albirostris White-lipped deer Przewalskium albirostris 1088058 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus HLprzAlb2 GCA_046563475.1 NCBI NWIPB_Pralbi_1.0 Chromosome 2025-01-08 Northwest Institute of Plateau Biology, Chinese Academy of Sciences 41342000 76185968 15019 172 5 Cervus_elaphus_hippelaphus__Red_deer__HLcerElapHip3__GCA_002197005.1 Cervus elaphus hippelaphus Red deer Cervus hippelaphus 46360 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus; Cervus elaphus HLcerElapHip3 GCA_002197005.1 NCBI CerEla1.0 Chromosome 2017-06-19 National Agricultural Research and Innovation Centre 7944 107358006 11593 1533 2070 Cervus_hanglu_yarkandensis__Yarkand_deer__HLcerHanYar1__GCA_010411085.1 Cervus hanglu yarkandensis Yarkand deer Cervus elaphus yarkandensis,Central Asian red deer 84702 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus; Cervus hanglu HLcerHanYar1 GCA_010411085.1 NCBI CEY_v1 Chromosome 2020-02-12 Institute of Special Wild Economic Animals and Plants, Chinese Academy of Agricultural Sciences 268660 77688133 14754 368 74 Dama_dama__fallow_deer__HLdamDam1__GCF_033118175.1 Dama dama fallow deer Texas fallow deers,Cervus dama,Texas fallow deer 30532 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Dama HLdamDam1 GCF_033118175.1 NCBI ASM3311817v1 Chromosome 2023-11-02 University of Central Lancashire 68791581 77069784 15029 164 3 Dama_dama__Fallow_deer__HLdamDama2__GCA_048126745.1 Dama dama Fallow deer Texas fallow deers,Texas fallow deer,Cervus dama 30532 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Dama HLdamDama2 GCA_048126745.1 NCBI DamDam1_v1.mat Chromosome 2025-02-27 University of Copenhagen 49431082 76496593 15036 153 7 Elaphurus_davidianus__Pere_Davids_deer__HLelaDav1__GCA_002443075.1 Elaphurus davidianus Pere Davids deer milu,Cervus davidianus 43332 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Elaphurus HLelaDav1 GCA_002443075.1 NCBI Milu1.0 Scaffold 2017-10-04 Nanjing Normal University 59950 2844142 14436 581 179 Rucervus_eldii_siamensis__Elds_deer__HLrucEldSia1__GCA_034233915.1 Rucervus eldii siamensis Elds deer Cervus eldii siamensis,Rucervus eldi siamensis,Cervus eldii,Rucervus eldi,Cervus eldi,Cervus eldi siamensis 141656 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Rucervus; Rucervus eldii HLrucEldSia1 GCA_034233915.1 NCBI ASM3423391v1 Scaffold 2023-12-08 Chulalongkorn University 24835543 24616240 14588 497 111 Rusa_alfredi__Visayan_spotted_deer__HLrusAlf1__GCA_038501445.1 Rusa alfredi Visayan spotted deer Cervus alfredi 1088129 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Rusa HLrusAlf1 GCA_038501445.1 NCBI RusAlf_1.1 Scaffold 2024-04-26 Philippine Genome Center Visayas 45918 75199327 14606 472 118 Hydropotes_inermis__Chinese_water_deer__HLhydIne1__GCA_006459105.1 Hydropotes inermis Chinese water deer 9883 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Hydropotinae; Hydropotes HLhydIne1 GCA_006459105.1 NCBI NPU_HINE_1.0 Scaffold 2019-06-25 Northwestern Polytechnical University 131446 13818975 14685 395 116 Muntiacus_crinifrons__black_muntjac__HLmunCri2__GCA_020276665.1 Muntiacus crinifrons black muntjac 71854 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunCri2 GCA_020276665.1 NCBI ASM2027666v1 Chromosome 2021-10-05 Northwestern Polytechnical University 25225000 646574120 14827 354 15 Muntiacus_gongshanensis__Gongshanensis_muntjac__HLmunGon1__GCA_020226025.1 Muntiacus gongshanensis Gongshanensis muntjac 145526 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunGon1 GCA_020226025.1 NCBI ASM2022602v1 Scaffold 2021-10-04 Northwestern Polytechnical University 24226309 24473636 13853 1103 240 Muntiacus_muntjak__muntjak__HLmunMun1__GCA_008782695.1 Muntiacus muntjak muntjak Indian muntjac 9888 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunMun1 GCA_008782695.1 NCBI UCB_Mmun_1.0 Chromosome 2019-10-07 University of California, Berkeley 215534 682452208 14720 338 138 Muntiacus_reevesi__Reeves_muntjac__HLmunRee1__GCA_008787405.1 Muntiacus reevesi Reeves muntjac Chinese muntjac,Reeves's muntjac 9886 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunRee1 GCA_008787405.1 NCBI UCB_Mree_1.0 Chromosome 2019-10-07 University of California, Berkeley 225142 94101870 14695 331 170 Muntiacus_reevesi__Reeves_muntjac__HLmunRee2__GCA_020226045.1 Muntiacus reevesi Reeves muntjac Chinese muntjac,Reeves's muntjac 9886 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunRee2 GCA_020226045.1 NCBI ASM2022604v1 Chromosome 2021-10-05 Northwestern Polytechnical University 18600000 113316579 14766 421 9 Muntiacus_reevesi__Reeves_muntjac__HLmunRee3__GCF_963930625.1 Muntiacus reevesi Reeves muntjac Reeves's muntjac,Cervus reevesi,Chinese muntjac 9886 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunRee3 GCF_963930625.1 NCBI mMunRee1.1 Chromosome 2024-01-31 WELLCOME SANGER INSTITUTE 5780196 114544513 15022 158 16 Muntiacus_vaginalis__Northern_red_muntjac__HLmunVag1__GCA_039877825.1 Muntiacus vaginalis Northern red muntjac Muntiacus muntjac vaginalis,Muntiacus muntiak vaginalis,Muntiacus muntjak vaginalis 9887 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus HLmunVag1 GCA_039877825.1 NCBI ASM3987782v1 Chromosome 2024-05-29 Hainan University 29270234 700271098 14886 287 23 Alces_alces__Eurasian_elk__HLalcAlc1__GCA_007570765.1 Alces alces Eurasian elk european elk,elk, moose 9852 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Alces HLalcAlc1 GCA_007570765.1 NCBI GSC_moose_1.0 Scaffold 2019-07-12 Canada's Genomic Enterprise 45090 4131188 13693 728 775 Capreolus_capreolus__Western_roe_deer__HLcapCap1__GCA_951849835.1 Capreolus capreolus Western roe deer Cervus capreolus 9858 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Capreolus HLcapCap1 GCA_951849835.1 NCBI ETH_CapCap1 Contig 2023-07-15 ETH ZURICH 69851389 69851389 14891 299 6 Capreolus_pygargus__Eastern_roe_deer__HLcapPyg1__GCA_012922965.1 Capreolus pygargus Eastern roe deer Capreolus capreolus pygargus 48560 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Capreolus HLcapPyg1 GCA_012922965.1 NCBI ASM1292296v1 Scaffold 2020-04-28 Northwestern Polytechnical University 80310 6067221 14565 410 221 Odocoileus_hemionus__mule_deer__HLodoHem2 Odocoileus hemionus mule deer 9872 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus HLodoHem2 DNA Zoo Consortium DNA Zoo Consortium 2021-09-08 28571243 72141738 13868 1262 66 Odocoileus_virginianus__white-tailed_deer__HLodoVir2 Odocoileus virginianus white-tailed deer 9874 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus HLodoVir2 DNA Zoo Consortium DNA Zoo Consortium 2020-09-11 114510 69881861 14112 963 121 Odocoileus_virginianus__white-tailed_deer__HLodoVir3__GCA_014726795.1 Odocoileus virginianus white-tailed deer 9874 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus HLodoVir3 GCA_014726795.1 NCBI Odo_v1 Scaffold 2020-09-24 New England Biolabs 5999512 17102683 11744 3387 65 Odocoileus_virginianus__White-tailed_deer__HLodoVirg4__GCF_023699985.2 Odocoileus virginianus White-tailed deer 9874 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus HLodoVirg4 GCF_023699985.2 NCBI Ovbor_1.2 Chromosome 2024-10-17 University of Illinois 21769372 66396233 14568 543 85 Odocoileus_hemionus_hemionus__mule_deer__HLodoHem1__GCA_004115125.1 Odocoileus hemionus hemionus mule deer 9877 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus; Odocoileus hemionus HLodoHem1 GCA_004115125.1 NCBI UofA_Ohem_1.0 Scaffold 2019-01-30 University of Alberta 113295 838758 13784 1004 408 Rangifer_tarandus_granti__reindeer__HLranTarGra2__GCA_014898785.1 Rangifer tarandus granti reindeer caribou 191431 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Rangifer; Rangifer tarandus HLranTarGra2 GCA_014898785.1 NCBI LSU_RangTar_1.0 Scaffold 2020-10-20 Louisiana State University 231342 9347320 14733 310 153 Rangifer_tarandus_platyrhynchus__Svalbard_reindeer__HLranTaraPla3__GCA_949782905.1 Rangifer tarandus platyrhynchus Svalbard reindeer reindeer,Cervus tarandus,caribou 3082113 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Rangifer; Rangifer tarandus HLranTaraPla3 GCA_949782905.1 NCBI mRanTar1.h1.1 Chromosome 2023-04-20 EBP Norway 22482685 69829200 15026 165 5 Giraffa_camelopardalis__giraffe__HLgirCam2 Giraffa camelopardalis giraffe 9894 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Giraffa HLgirCam2 DNA Zoo Consortium DNA Zoo Consortium 2020-08-01 45664 154205505 14191 529 476 Giraffa_tippelskirchi__Masai_giraffe__HLgirTip1__GCA_001651235.1 Giraffa tippelskirchi Masai giraffe Giraffa camelopardalis rothschildi,Giraffa camelopardalis tippelskirchi 439328 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Giraffa HLgirTip1 GCA_001651235.1 NCBI ASM165123v1 Scaffold 2016-05-20 Pennsylvania State University 47894 212164 14103 511 582 Giraffa_tippelskirchi__Masai_giraffe__HLgirTip2__GCA_013496395.1 Giraffa tippelskirchi Masai giraffe Giraffa camelopardalis tippelskirchi 439328 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Giraffa HLgirTip2 GCA_013496395.1 NCBI ASM1349639v1 Chromosome 2020-07-24 University of California Davis 25031 160341600 13563 1509 124 Giraffa_tippelskirchi__Masai_giraffe__HLgirTipp3__GCF_054371585.1 Giraffa tippelskirchi Masai giraffe Giraffa camelopardalis tippelskirchi 439328 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Giraffa HLgirTipp3 GCF_054371585.1 NCBI T2T-mGirTip1v1.2.pri Complete Genome 2026-01-06 Ruminant T2T 166642423 166642423 15064 124 8 Giraffa_camelopardalis_antiquorum__Kordofan_giraffe__HLgirCamAnt3__GCA_018282235.1 Giraffa camelopardalis antiquorum Kordofan giraffe giraffe 439324 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Giraffa; Giraffa camelopardalis HLgirCamAnt3 GCA_018282235.1 NCBI ASM1828223v1 Scaffold 2021-05-05 Senckenberg Nature Research Society 228443 27504022 14823 269 104 Giraffa_camelopardalis_rothschildi__giraffe__HLgirCamRot3__GCA_017591445.1 Giraffa camelopardalis rothschildi giraffe 2740528 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Giraffa; Giraffa camelopardalis HLgirCamRot3 GCA_017591445.1 NCBI ASM1759144v1 Chromosome 2021-03-30 Northwestern Polytechnical University 11323477 158234173 13363 1781 52 Okapia_johnstoni__okapi__HLokaJoh2 Okapia johnstoni okapi 86973 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Okapia HLokaJoh2 DNA Zoo Consortium DNA Zoo Consortium 2020-07-27 36462 97427823 13724 748 724 Okapia_johnstoni__okapi__HLokaJoh3__GCA_024291935.1 Okapia johnstoni okapi 86973 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Giraffidae; Okapia HLokaJoh3 GCA_024291935.1 NCBI TBG_Okapi_asm_v1 Chromosome 2022-07-16 Senckenberg Nature Research Society 61700678 102048473 13245 1940 11 Moschus_berezovskii__Chinese_forest_musk_deer__HLmosBer2 Moschus berezovskii Chinese forest musk deer 68408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus HLmosBer2 DNA Zoo Consortium DNA Zoo Consortium 2021-11-10 39448 102122392 14835 300 61 Moschus_berezovskii__Chinese_forest_musk_deer__HLmosBer3__GCA_022376915.1 Moschus berezovskii Chinese forest musk deer 68408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus HLmosBer3 GCA_022376915.1 NCBI ASM2237691v1 Scaffold 2022-02-23 Northwestern Polytechnical University 15241556 102413370 14740 432 24 Moschus_berezovskii__Chinese_forest_musk_deer__HLmosBere4__GCA_049115385.1 Moschus berezovskii Chinese forest musk deer 68408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus HLmosBere4 GCA_049115385.1 NCBI NW_MosBer_1.0 Chromosome 2025-03-28 Northwest A & F University 91326797 111330059 14942 211 43 Moschus_chrysogaster__alpine_musk_deer__HLmosChr1__GCA_006461725.1 Moschus chrysogaster alpine musk deer Moschus sifanicus 68412 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus HLmosChr1 GCA_006461725.1 NCBI NPU_MCHR_1.0 Scaffold 2019-06-25 Northwestern Polytechnical University 3769 100428 8289 2325 4582 Moschus_moschiferus__Siberian_musk_deer__HLmosMos1__GCA_004024705.2 Moschus moschiferus Siberian musk deer 68415 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus HLmosMos1 GCA_004024705.2 NCBI MosMos_v2_BIUU_UCD Scaffold 2019-07-15 Broad Institute 34785 11728851 14945 190 61 Tragulus_javanicus__Java_mouse-deer__HLtraJav1__GCA_004024965.2 Tragulus javanicus Java mouse-deer Lesser Malay chevrotain 9849 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Tragulina; Tragulidae; Tragulus HLtraJav1 GCA_004024965.2 NCBI ASM402496v2 Scaffold 2019-07-15 Broad Institute 80230 14082842 14464 402 330 Tragulus_kanchil__Lesser_mouse_deer__HLtraKan2__GCA_022376925.1 Tragulus kanchil Lesser mouse deer 1088131 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Tragulina; Tragulidae; Tragulus HLtraKan2 GCA_022376925.1 NCBI ASM2237692v1 Scaffold 2022-02-23 Northwestern Polytechnical University 29645945 224309082 14146 877 173 Babyrousa_celebensis__North_Sulawesi_babirusa__HLbabCel1 Babyrousa celebensis North Sulawesi babirusa Babyrousa babyrussa celebensis 1303000 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Babyrousa HLbabCel1 DNA Zoo Consortium DNA Zoo Consortium 2022-08-05 52115 112896847 13427 607 1162 Phacochoerus_africanus__Common_warthog__HLphaAfr1__GCA_016906955.1 Phacochoerus africanus Common warthog warthog 41426 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Phacochoerus HLphaAfr1 GCA_016906955.1 NCBI ROS_Pafr_v1 Chromosome 2021-02-19 The Roslin Institute 10602503 141887063 14665 517 14 Sus_cebifrons__Visayan_warty_pig__HLsusCeb1__GCA_905335845.1 Sus cebifrons Visayan warty pig 315377 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus HLsusCeb1 GCA_905335845.1 NCBI Sus_cebifrons.v1 Scaffold 2022-09-22 WAGENINGEN UR 159795 141782568 14487 585 124 Sus_scrofa__Pig__HLsusScro12__GCA_048338725.1 Sus scrofa Pig swine,Sus scrofa Pietrain,pigs,Sus scrofa LW,wild boar 9823 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus HLsusScro12 GCA_048338725.1 NCBI T2T_pig1.0 Complete Genome 2025-03-05 China Agricultural University 144930921 144930921 15065 123 8 Sus_scrofa__pig__susScr11__GCF_000003025.6 Sus scrofa pig wild boar,pigs,swine 9823 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus susScr11 GCF_000003025.6 NCBI Sscrofa11.1 Chromosome 2017-02-07 The Swine Genome Sequencing Consortium (SGSC) 48231277 88231837 13695 1480 21 Catagonus_wagneri__Chacoan_peccary__HLcatWag1__GCA_004024745.2 Catagonus wagneri Chacoan peccary 51154 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Suina; Tayassuidae; Catagonus HLcatWag1 GCA_004024745.2 NCBI CatWag_v2_BIUU_UCD Scaffold 2019-07-15 Broad Institute 65965 19204659 14851 222 123 Camelus_bactrianus__Bactrian_camel__HLcamBac1__GCA_000767855.1 Camelus bactrianus Bactrian camel camel,two-humped camel,domestic Bactrian camel 9837 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus HLcamBac1 GCA_000767855.1 NCBI Ca_bactrianus_MBC_1.0 Scaffold 2014-10-23 Inner Mongolia Agricultural University, P.R.China 139019 8812066 13023 1934 239 Camelus_dromedarius__Arabian_camel__HLcamDro2__GCA_000803125.3 Camelus dromedarius Arabian camel dromedary camel,one-humped camel,camel,dromedaries,dromedary 9838 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus HLcamDro2 GCA_000803125.3 NCBI CamDro3 Chromosome 2019-10-07 Vetmeduni Vienna 236391 70369702 13756 1414 26 Camelus_dromedarius__Arabian_camel__HLcamDro3A__GCF_036321535.1 Camelus dromedarius Arabian camel dromedary,dromedary camel,dromedaries,one-humped camel,camel 9838 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus HLcamDro3A GCF_036321535.1 NCBI mCamDro1.pat Chromosome 2024-01-31 Vertebrate Genomes Project 31216184 72991593 14827 299 70 Camelus_dromedarius__Arabian_camel__HLcamDro3B__GCA_036321565.1 Camelus dromedarius Arabian camel one-humped camel,dromedaries,dromedary camel,camel,dromedary 9838 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus HLcamDro3B GCA_036321565.1 NCBI mCamDro1.hap2 Chromosome 2024-01-31 Vertebrate Genomes Project 28900355 70331411 14102 492 602 Camelus_ferus__Wild_Bactrian_camel__HLcamFer3__GCA_009834535.1 Camelus ferus Wild Bactrian camel Camelus bactrianus ferus 419612 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus HLcamFer3 GCA_009834535.1 NCBI BCGSAC_Cfer_1.0 Chromosome 2020-01-08 The Bactrian Camels Genome Sequencing and Analysis Consortium 5365398 76025729 13837 1275 84 Lama_glama__llama__HLlamGla1 Lama glama llama Lama guanicoe glama,Camelus glama 9844 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Lama HLlamGla1 DNA Zoo Consortium DNA Zoo Consortium 2020-08-01 92440 57409894 14047 492 657 Lama_glama_chaku__llama__HLlamGlaCha1__GCA_013239585.1 Lama glama chaku llama Camelus glama,Lama guanicoe glama 273914 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Lama; Lama glama HLlamGlaCha1 GCA_013239585.1 NCBI ASM1323958v1 Scaffold 2020-06-02 Shanxi Agricultural University 111519 3269186 14565 518 113 Lama_guanicoe_cacsilensis__guanaco__HLlamGuaCac1__GCA_013239625.1 Lama guanicoe cacsilensis guanaco Lama guanicoe guanaco 273908 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Lama; Lama guanicoe HLlamGuaCac1 GCA_013239625.1 NCBI ASM1323962v1 Scaffold 2020-06-02 Shanxi Agricultural University 343812 14786206 14755 408 33 Vicugna_pacos__alpaca__HLvicPac4 Vicugna pacos alpaca Lama guanicoe pacos,Lama pacos 30538 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna HLvicPac4 DNA Zoo Consortium DNA Zoo Consortium 2021-02-12 23086 73726673 13355 1548 293 Vicugna_pacos__Alpaca__HLvicPaco5__GCF_048564905.1 Vicugna pacos Alpaca Camelus pacos,Lama pacos,Lama guanicoe pacos 30538 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna HLvicPaco5 GCF_048564905.1 NCBI VicPac4 Chromosome 2025-03-12 Texas A&M University 40278543 75404351 15005 180 11 Vicugna_pacos_huacaya__alpaca__HLvicPacHua3__GCA_000767525.1 Vicugna pacos huacaya alpaca Lama pacos,Lama pacos huacaya,Lama guanicoe pacos 273913 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna; Vicugna pacos HLvicPacHua3 GCA_000767525.1 NCBI Vi_pacos_V1.0 Scaffold 2015-02-11 BGI-Shenzhen 213649 5303709 14267 751 178 Vicugna_vicugna_mensalis__vicugna__HLvicVicMen1__GCA_013265495.1 Vicugna vicugna mensalis vicugna Vicugna mensalis,Camelus vicugna,Lama vicugna,vicuna 273917 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna; Vicugna vicugna HLvicVicMen1 GCA_013265495.1 NCBI ASM1326549v1 Scaffold 2020-06-02 Shanxi Agricultural University 340839 6158010 14775 352 69 Hexaprotodon_liberiensis__pygmy_hippopotamus__HLhexLib1__GCA_023065765.1 Hexaprotodon liberiensis pygmy hippopotamus Choeropsis liberiensis 56798 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Ancodonta; Hippopotamidae; Hexaprotodon HLhexLib1 GCA_023065765.1 NCBI ASM2306576v1 Chromosome 2022-04-22 northwestern polytechnology university 20244513 142594368 14602 482 112 Hippopotamus_amphibius__hippopotamus__HLhipAmp3__GCA_004027065.2 Hippopotamus amphibius hippopotamus Hippopotamus amphibious 9833 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Ancodonta; Hippopotamidae; Hippopotamus HLhipAmp3 GCA_004027065.2 NCBI HipAmp_v2_BIUU_UCD Scaffold 2019-07-15 Broad Institute 76609 4444377 14868 198 130 Hippopotamus_amphibius__hippopotamus__HLhipAmp4__GCA_023065835.1 Hippopotamus amphibius hippopotamus Hippopotamus amphibious 9833 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Ancodonta; Hippopotamidae; Hippopotamus HLhipAmp4 GCA_023065835.1 NCBI ASM2306583v1 Chromosome 2022-04-22 northwestern polytechnology university 49478000 141669128 14810 302 84 Hippopotamus_amphibius_kiboko__Hippopotamus__HLhipAmphKib5A__GCF_030028045.1 Hippopotamus amphibius kiboko Hippopotamus Hippopotamus amphibious 575201 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Ancodonta; Hippopotamidae; Hippopotamus; Hippopotamus amphibius HLhipAmphKib5A GCF_030028045.1 NCBI mHipAmp2.hap2 Chromosome 2023-05-18 Vertebrate Genomes Project 50348260 149218186 15014 157 25 Balaena_mysticetus__bowhead_whale__HLbalMys1 Balaena mysticetus bowhead whale bowhead,Greenland right whale 27602 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenidae; Balaena HLbalMys1 http://alfred.liv.ac.uk/downloads/bowhead_whale/bowhead_whale_scaffolds.zip http://alfred.liv.ac.uk/downloads/bowhead_whale/bowhead_whale_scaffolds.zip 2018-02-21 33808 876686 13918 666 612 Eubalaena_australis__Southern_right_whale__HLeubAus1 Eubalaena australis Southern right whale 160595 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenidae; Eubalaena HLeubAus1 DNA Zoo Consortium DNA Zoo Consortium 2021-01-29 37826 112042483 14480 530 186 Eubalaena_glacialis__North_Atlantic_right_whale__HLeubGla2__GCF_028564815.1 Eubalaena glacialis North Atlantic right whale Balaena glacialis,northern right whale 27606 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenidae; Eubalaena HLeubGla2 GCF_028564815.1 NCBI mEubGla1.1.hap2.+ XY Chromosome 2023-02-09 Vertebrate Genomes Project 37467374 129620717 14860 328 8 Eubalaena_japonica__North_Pacific_right_whale__HLeubJap1__GCA_004363455.1 Eubalaena japonica North Pacific right whale 302098 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenidae; Eubalaena HLeubJap1 GCA_004363455.1 NCBI EubJap_v1_BIUU Scaffold 2019-03-22 Broad Institute 34866 39813 13891 568 737 Balaenoptera_acutorostrata__minke_whale__HLbalAcu2__GCA_949987535.1 Balaenoptera acutorostrata minke whale lesser rorqual 9767 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalAcu2 GCA_949987535.1 NCBI mBalAcu1.1 Chromosome 2023-05-01 WELLCOME SANGER INSTITUTE 3015723 116513105 14757 394 45 Balaenoptera_bonaerensis__Antarctic_minke_whale__HLbalBon1__GCA_000978805.1 Balaenoptera bonaerensis Antarctic minke whale 33556 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalBon1 GCA_000978805.1 NCBI ASM97880v1 Scaffold 2015-03-18 Division of Biological Science, Graduate School of Science, Kyoto University 8410 20082 11837 1476 1883 Balaenoptera_borealis__Sei_whale__HLbalBor1__GCA_965194725.1 Balaenoptera borealis Sei whale 9768 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalBor1 GCA_965194725.1 NCBI mBalBor1.hap2.1 Scaffold 2025-03-05 WELLCOME SANGER INSTITUTE 2797172 105947969 14787 366 43 Balaenoptera_borealis__Sei_whale__HLbalBore1A__GCA_965194805.1 Balaenoptera borealis Sei whale 9768 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalBore1A GCA_965194805.1 NCBI mBalBor1.hap1.1 Chromosome 2025-03-10 WELLCOME SANGER INSTITUTE 2585625 118917181 14783 376 37 Balaenoptera_edeni__pygmy_Brydes_whale__HLbalEde1 Balaenoptera edeni pygmy Brydes whale Balaenoptera edeni edeni 9769 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalEde1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-10 70721 99560599 14255 538 403 Balaenoptera_edeni__Edens_whale__HLbalEden2__GCA_052818205.1 Balaenoptera edeni Edens whale pygmy Bryde's whale,Balaenoptera edeni edeni 9769 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalEden2 GCA_052818205.1 NCBI BalEdn.hic.v1 Chromosome 2025-09-24 Hong Kong Baptist University 56810546 112310848 14849 336 11 Balaenoptera_musculus__Blue_whale__HLbalMus2__GCF_009873245.2 Balaenoptera musculus Blue whale 9771 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalMus2 GCF_009873245.2 NCBI mBalMus1.pri.v3 Chromosome 2020-10-02 G10K 6315640 110314666 14294 876 26 Balaenoptera_physalus__Fin_whale__HLbalPhy2 Balaenoptera physalus Fin whale finback whale,common rorqual 9770 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalPhy2 DNA Zoo Consortium DNA Zoo Consortium 2022-05-03 38471 77706511 13167 882 1147 Balaenoptera_physalus__Fin_whale__HLbalPhy3__GCA_023338255.1 Balaenoptera physalus Fin whale common rorqual,finback whale 9770 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalPhy3 GCA_023338255.1 NCBI SBiKF_Bphy_ph2 Scaffold 2022-05-11 Senckenberg BiK-F 146061 24939677 14044 906 246 Balaenoptera_physalus__Fin_whale__HLbalPhy4__GCA_965194765.1 Balaenoptera physalus Fin whale Balaena physalus,common rorqual,finback whale 9770 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalPhy4 GCA_965194765.1 NCBI mBalPhy2.hap2.1 Scaffold 2025-03-05 WELLCOME SANGER INSTITUTE 2312464 106919552 14273 410 513 Balaenoptera_physalus__Fin_whale__HLbalPhys5A__GCA_965194825.1 Balaenoptera physalus Fin whale finback whale,common rorqual,Balaena physalus 9770 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalPhys5A GCA_965194825.1 NCBI mBalPhy2.hap1.1 Chromosome 2025-03-10 WELLCOME SANGER INSTITUTE 2079521 110866263 14781 373 42 Balaenoptera_ricei__Rices_whale__HLbalRic1 Balaenoptera ricei Rices whale Balaenoptera edeni ssp. n. PR-2020 2746895 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalRic1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-06 70721 99560599 14252 541 403 Balaenoptera_ricei__Rices_whale__HLbalRic2__GCF_028023285.1 Balaenoptera ricei Rices whale Balaenoptera edeni ssp. n. PR-2020 2746895 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera HLbalRic2 GCF_028023285.1 NCBI mBalRic1.hap2 Chromosome 2023-01-30 Vertebrate Genomes Project 36541936 122071569 14784 393 19 Megaptera_novaeangliae__humpback_whale__HLmegNov2 Megaptera novaeangliae humpback whale 9773 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Megaptera HLmegNov2 DNA Zoo Consortium DNA Zoo Consortium 2021-12-28 55183 94294397 13799 661 736 Megaptera_novaeangliae__Humpback_whale__HLmegNova3__GCA_041834305.1 Megaptera novaeangliae Humpback whale Balaena novaeangliae 9773 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Megaptera HLmegNova3 GCA_041834305.1 NCBI ASM4183430v1 Chromosome 2024-09-09 University of Colorado - Boulder 36344089 107416641 14823 362 11 Eschrichtius_robustus__grey_whale__HLescRob3__GCA_028021215.1 Eschrichtius robustus grey whale gray whale,California gray whale,Eschrichtius gibbosus,Balaenoptera robusta 9764 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Eschrichtiidae; Eschrichtius HLescRob3 GCA_028021215.1 NCBI mEscRob2.pri Chromosome 2023-01-31 Vertebrate Genomes Project 39209000 126538682 14828 363 5 Caperea_marginata__Pygmy_right_whale__HLcapMar3__GCA_029224305.1 Caperea marginata Pygmy right whale Balaena marginata 27604 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Neobalaenidae; Caperea HLcapMar3 GCA_029224305.1 NCBI Cmar_C18_SBIK-F_TBG_1 Scaffold 2023-03-16 Senckenberg BiK-F, LOEWE-TBG 19492 112264 11237 2214 1745 Cephalorhynchus_commersonii__Commersons_dolphin__HLcepCom1 Cephalorhynchus commersonii Commersons dolphin Cephalorhynchus commersoni 103582 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Cephalorhynchus HLcepCom1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-19 91726 104003720 14317 619 260 Delphinus_delphis__saddleback_dolphin__HLdelDel2__GCA_030062865.1 Delphinus delphis saddleback dolphin Black Sea dolphin,short-beaked saddleback dolphin,common dolphin 9728 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Delphinus HLdelDel2 GCA_030062865.1 NCBI ASM3006286v1 Chromosome 2023-05-24 First Institute of Oceanography, Ministry of Natural Resources 54231611 108933991 14628 559 9 Delphinus_delphis__Saddleback_dolphin__HLdelDelp3__GCA_030062865.2 Delphinus delphis Saddleback dolphin Black Sea dolphin,common dolphin,short-beaked saddleback dolphin 9728 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Delphinus HLdelDelp3 GCA_030062865.2 NCBI ASM3006286v2 Chromosome 2024-03-15 First Institute of Oceanography, Ministry of Natural Resources 54231611 108933991 14635 554 7 Globicephala_melas__long-finned_pilot_whale__HLgloMel3__GCA_963455315.1 Globicephala melas long-finned pilot whale Globicephala melaena,Delphinus melas 9731 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Globicephala HLgloMel3 GCA_963455315.1 NCBI mGloMel1.1 Chromosome 2023-09-21 WELLCOME SANGER INSTITUTE 3290841 105087932 14642 524 30 Grampus_griseus__Rissos_dolphin__HLgraGri1 Grampus griseus Rissos dolphin 83653 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Grampus HLgraGri1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-26 61551 93180659 13835 776 585 Grampus_griseus__Rissos_dolphin__HLgraGris2A__GCA_964374135.1 Grampus griseus Rissos dolphin Delphinus griseus 83653 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Grampus HLgraGris2A GCA_964374135.1 NCBI mGraGri1.hap1.1 Chromosome 2024-11-29 WELLCOME SANGER INSTITUTE 3106000 107608252 14641 524 31 Lagenorhynchus_albirostris__white-beaked_dolphin__HLlagAlb1__GCF_949774975.1 Lagenorhynchus albirostris white-beaked dolphin 27610 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus HLlagAlb1 GCF_949774975.1 NCBI mLagAlb1.1 Chromosome 2023-04-08 WELLCOME SANGER INSTITUTE 3398034 110721866 14594 558 44 Leucopleurus_acutus__Atlantic_white-sided_dolphin__HLlagAcu1 Leucopleurus acutus Atlantic white-sided dolphin Lagenorhynchus acutus 90246 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Leucopleurus HLlagAcu1 DNA Zoo Consortium DNA Zoo Consortium 2021-07-15 86182 103333746 14284 639 273 Leucopleurus_acutus__Atlantic_white-sided_dolphin__HLlagAcu2A__GCA_964270905.1 Leucopleurus acutus Atlantic white-sided dolphin Lagenorhynchus acutus, Delphinus acutus 90246 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Leucopleurus HLlagAcu2A GCA_964270905.1 NCBI mLagAcu1.hap1.1 Chromosome 2024-09-29 WELLCOME SANGER INSTITUTE 3493168 109653882 14645 522 29 Leucopleurus_acutus__Atlantic_white-sided_dolphin__HLlagAcu2B__GCA_964270935.1 Leucopleurus acutus Atlantic white-sided dolphin Lagenorhynchus acutus, Delphinus acutus 90246 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Leucopleurus HLlagAcu2B GCA_964270935.1 NCBI mLagAcu1.hap2.1 Scaffold 2024-09-30 WELLCOME SANGER INSTITUTE 3587343 105937634 14121 552 523 Orcinus_orca__killer_whale__HLorcOrc3__GCA_937001465.1 Orcinus orca killer whale Orca 9733 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus HLorcOrc3 GCA_937001465.1 NCBI mOrcOrc1.1 Chromosome 2022-05-03 WELLCOME SANGER INSTITUTE 45583382 114219206 14664 523 9 Peponocephala_electra__melon-headed_whale__HLpepEle1 Peponocephala electra melon-headed whale 103596 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Peponocephala HLpepEle1 DNA Zoo Consortium DNA Zoo Consortium 2020-08-28 84444 102795557 14273 618 305 Peponocephala_electra__Melon-headed_whale__HLpepElec2A__GCA_051427945.1 Peponocephala electra Melon-headed whale Lagenorhynchus electra 103596 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Peponocephala HLpepElec2A GCA_051427945.1 NCBI mPepEle1.hap1 Chromosome 2025-07-21 Vertebrate Genomes Project 57154926 110605234 14670 513 13 Pseudorca_crassidens__false_killer_whale__HLpseCra1 Pseudorca crassidens false killer whale Pseudoorca crassidens 82174 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Pseudorca HLpseCra1 CNGB Sequence Archive CNGB Sequence Archive 2021-10-16 286038 32497177 14260 817 119 Pseudorca_crassidens__False_killer_whale__HLpseCra2A__GCF_039906515.1 Pseudorca crassidens False killer whale Phocoena crassidens,Pseudoorca crassidens 82174 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Pseudorca HLpseCra2A GCF_039906515.1 NCBI mPseCra1.hap1 Chromosome 2024-05-31 Vertebrate Genomes Project 58817648 110095734 14676 511 9 Sagmatias_australis__Peales_dolphin__HLlagAus1 Sagmatias australis Peales dolphin Lagenorhynchus australis 103586 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sagmatias HLlagAus1 CNGB Sequence Archive CNGB Sequence Archive 2021-10-01 41825 384955 13173 1106 917 Sagmatias_obliquidens__Pacific_white-sided_dolphin__HLlagObl2 Sagmatias obliquidens Pacific white-sided dolphin Lagenorhynchus obliquidens 90247 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sagmatias HLlagObl2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-07 254944 107447310 14557 585 54 Sotalia_fluviatilis__Gray_dolphin__HLsotFluv1__GCA_059578065.1 Sotalia fluviatilis Gray dolphin Delphinus fluviatilis 103598 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sotalia HLsotFluv1 GCA_059578065.1 NCBI Unicamp_Sflu_1.0 Chromosome 2026-07-22 Universidade Estadual de Campinas 119645 106206519 14455 636 105 Sotalia_guianensis__Guyana_river_dolphin__HLsotGuia1__GCA_059578245.1 Sotalia guianensis Guyana river dolphin Delphinus guianensis 338729 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sotalia HLsotGuia1 GCA_059578245.1 NCBI Sgui_1.0 Chromosome 2026-07-22 Universidade Estadual de Campinas 51706 105207191 14223 723 250 Sousa_chinensis__Indo-pacific_humpbacked_dolphin__HLsouChi1__GCA_007760645.1 Sousa chinensis Indo-pacific humpbacked dolphin 103600 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Sousa HLsouChi1 GCA_007760645.1 NCBI ASM776064v1 Scaffold 2019-07-31 BGI-SZ 113766 19436979 14152 943 101 Stenella_attenuata__bridled_dolphin__HLsteAtt1 Stenella attenuata bridled dolphin pantropical spotted dolphin 9735 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Stenella HLsteAtt1 DNA Zoo Consortium DNA Zoo Consortium 2021-07-21 48983 93377156 13707 811 678 Stenella_clymene__Clymene_dolphin__HLsteCly1 Stenella clymene Clymene dolphin 103589 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Stenella HLsteCly1 DNA Zoo Consortium DNA Zoo Consortium 2022-04-10 35184 75183736 13093 992 1111 Stenella_coeruleoalba__striped_dolphin__HLsteCoe1__GCA_951394435.1 Stenella coeruleoalba striped dolphin Delphinus coeruleoalbus 9737 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Stenella HLsteCoe1 GCA_951394435.1 NCBI mSteCoe1.1 Chromosome 2023-06-16 WELLCOME SANGER INSTITUTE 3590204 105253534 14596 564 36 Stenella_frontalis__Atlantic_spotted_dolphin__HLsteFro1 Stenella frontalis Atlantic spotted dolphin 103590 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Stenella HLsteFro1 DNA Zoo Consortium DNA Zoo Consortium 2021-07-21 82553 97674026 14127 660 409 Stenella_longirostris_orientalis__spinner_dolphin__HLsteLonOri1 Stenella longirostris orientalis spinner dolphin pantropical spinner dolphin,eastern spinner dolphin 158747 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Stenella; Stenella longirostris HLsteLonOri1 DNA Zoo Consortium DNA Zoo Consortium 2021-07-21 42958 90858316 13518 838 840 Steno_bredanensis__rough-toothed_dolphin__HLsteBre1 Steno bredanensis rough-toothed dolphin 46167 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Steno HLsteBre1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-12 59460 94897118 14043 690 463 Tursiops_aduncus__Indo-pacific_bottlenose_dolphin__HLturAdu2 Tursiops aduncus Indo-pacific bottlenose dolphin 79784 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops HLturAdu2 DNA Zoo Consortium DNA Zoo Consortium 2020-08-02 197376 111961311 14304 807 85 Tursiops_truncatus__common_bottlenose_dolphin__HLturTru5__GCF_011762595.1 Tursiops truncatus common bottlenose dolphin bottle-nosed dolphin,Atlantic bottlenose dolphin 9739 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops HLturTru5 GCF_011762595.1 NCBI mTurTru1.mat.Y Chromosome 2020-03-27 Vertebrate Genomes Project 9729386 108430135 14601 567 28 Inia_geoffrensis__Boutu__HLiniGeo2A__GCA_036417435.1 Inia geoffrensis Boutu Amazon dolphin,boto,Amazon river dolphin,Delphinus geoffrensis,pink river dolphin,Amazon porpoise 9725 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Iniidae; Inia HLiniGeo2A GCA_036417435.1 NCBI mIniGeo1.hap1 Chromosome 2024-02-06 Cetaceans Genome Project 40892022 117431308 14616 565 15 Inia_geoffrensis__Boutu__HLiniGeo2B__GCA_036417475.1 Inia geoffrensis Boutu Amazon dolphin,pink river dolphin,Delphinus geoffrensis,Amazon river dolphin,Amazon porpoise,boto 9725 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Iniidae; Inia HLiniGeo2B GCA_036417475.1 NCBI mIniGeo1.hap2 Chromosome 2024-02-06 Cetaceans Genome Project 41942625 109672245 14084 587 525 Lipotes_vexillifer__Yangtze_River_dolphin__lipVex1__GCF_000442215.1 Lipotes vexillifer Yangtze River dolphin baiji 118797 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes lipVex1 GCF_000442215.1 NCBI Lipotes_vexillifer_v1 Scaffold 2013-07-31 BGI 31902 2419148 13858 1227 111 Delphinapterus_leucas__beluga_whale__HLdelLeu2__GCA_002288925.3 Delphinapterus leucas beluga whale beluga,white whale 9749 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus HLdelLeu2 GCA_002288925.3 NCBI ASM228892v3 Scaffold 2019-08-29 BC Cancer Agency 196689 31183418 14537 601 58 Delphinapterus_leucas__beluga_whale__HLdelLeu4__GCA_035221355.1 Delphinapterus leucas beluga whale beluga,Delphinus leucas,white whale 9749 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus HLdelLeu4 GCA_035221355.1 NCBI mDelLeu1_p1.0 Scaffold 2024-01-08 Canada's Genomic Enterprise 3310522 44354054 14533 626 37 Monodon_monoceros__narwhal__HLmonMon1__GCA_005190385.2 Monodon monoceros narwhal 40151 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Monodon HLmonMon1 GCA_005190385.2 NCBI NGI_Narwhal_1 Scaffold 2019-05-06 The Narwhal Genome Initiative 255327 107566389 14446 682 68 Monodon_monoceros__narwhal__HLmonMon2__GCA_005190385.3 Monodon monoceros narwhal 40151 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Monodon HLmonMon2 GCA_005190385.3 NCBI, JoanaDamas 2021-01-03 22031227 108465051 13751 1420 25 Neophocaena_sunameri__East_Asian_finless_porpoise__HLneoAsiSun2__GCA_026225855.1 Neophocaena sunameri East Asian finless porpoise Neophocaena asiaorientalis sunameri,narrow-ridged finless porpoise,Neophocaena phocaenoides asiaeorientalis,Neophocaena asiaeorientalis sunameri,Neophocaena phocaenoides sunameri 861190 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena HLneoAsiSun2 GCA_026225855.1 NCBI ASM2622585v1 Chromosome 2022-11-18 Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences 84691504 122398165 14676 508 12 Phocoena_phocoena__harbor_porpoise__HLphoPho3__GCA_963924675.1 Phocoena phocoena harbor porpoise Delphinus phocoena,common porpoise,Phocoenoides phocoena 9742 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena HLphoPho3 GCA_963924675.1 NCBI mPhoPho1.1 Chromosome 2024-01-29 WELLCOME SANGER INSTITUTE 3726689 110192646 14633 538 25 Phocoena_sinus__vaquita__HLphoSin1__GCA_008692025.1 Phocoena sinus vaquita 42100 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena HLphoSin1 GCA_008692025.1 NCBI mPhoSin1.pri Chromosome 2019-09-26 Vertebrate Genomes Project 20218762 115469292 14016 1158 22 Kogia_breviceps__pygmy_sperm_whale__HLkogBre3__GCF_026419965.1 Kogia breviceps pygmy sperm whale Physeter breviceps 27615 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Kogia HLkogBre3 GCF_026419965.1 NCBI mKogBre1 haplotype 1 Chromosome 2022-11-27 Vertebrate Genomes Project 42780423 122394096 14593 588 15 Kogia_sima__dwarf_sperm_whale__HLkogSim1 Kogia sima dwarf sperm whale Kogia simus 9752 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Kogia HLkogSim1 CNGB Sequence Archive CNGB Sequence Archive 2021-10-16 79492 26525949 12772 1672 752 Physeter_macrocephalus__sperm_whale__HLphyCat2__GCA_002837175.2 Physeter macrocephalus sperm whale Physeter catodon 9755 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter HLphyCat2 GCA_002837175.2 NCBI ASM283717v2 Chromosome 2019-03-08 BGI 42542 122182240 14144 688 364 Physeter_macrocephalus__Sperm_whale__HLphyMacr3A__GCA_978012005.1 Physeter macrocephalus Sperm whale Physeter catodon 9755 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter HLphyMacr3A GCA_978012005.1 NCBI mPhyCat2.hap1.1 Chromosome 2026-02-01 WELLCOME SANGER INSTITUTE 43408382 120321103 14666 513 17 Platanista_gangetica__Ganges_River_dolphin__HLplaGan1__GCA_017311385.1 Platanista gangetica Ganges River dolphin 118798 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Platanistidae; Platanista HLplaGan1 GCA_017311385.1 NCBI HRRL_Platanista_gangetica_1.0 Contig 2021-03-09 Chittagong Veterinary and Animal Sciences University; University of Chittagong (HRRL) 3092 3092 6364 3578 5254 Platanista_gangetica__Ganges_River_dolphin__HLplaGang2__GCA_054084255.1 Platanista gangetica Ganges River dolphin Delphinus gangeticus 118798 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Platanistidae; Platanista HLplaGang2 GCA_054084255.1 NCBI GACMC_Pgan Scaffold 2025-12-18 Wildlife Institute of India 91134 116082929 14052 951 193 Platanista_minor__Indus_River_dolphin__HLplaMin1__GCA_004363435.1 Platanista minor Indus River dolphin Platanista gangetica minor 48752 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Platanistidae; Platanista HLplaMin1 GCA_004363435.1 NCBI PlaMin_v1_BIUU Scaffold 2019-03-22 Broad Institute 20879 23933 12678 1138 1380 Pontoporia_blainvillei__franciscana__HLponBla1__GCA_011754075.1 Pontoporia blainvillei franciscana 48723 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Pontoporiidae; Pontoporia HLponBla1 GCA_011754075.1 NCBI ASM1175407v1 Scaffold 2020-03-25 Universidade do Vale do Itajai (UNIVALI) 5888 6929 8024 2966 4206 Hyperoodon_ampullatus__northern_bottlenose_whale__HLhypAmp2__GCA_949752795.1 Hyperoodon ampullatus northern bottlenose whale Balaena ampullata 48744 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Hyperoodon HLhypAmp2 GCA_949752795.1 NCBI mHypAmp2.1 Chromosome 2023-04-08 WELLCOME SANGER INSTITUTE 3126546 117448692 14560 580 56 Mesoplodon_bidens__Sowerbys_beaked_whale__HLmesBid1__GCA_004027085.1 Mesoplodon bidens Sowerbys beaked whale 48745 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesBid1 GCA_004027085.1 NCBI MesBid_v1_BIUU Scaffold 2019-01-16 Broad Institute 28959 33532 13475 818 903 Mesoplodon_bidens__Sowerbys_beaked_whale__HLmesBid2A__GCA_964165515.1 Mesoplodon bidens Sowerbys beaked whale Physeter bidens 48745 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesBid2A GCA_964165515.1 NCBI mMesBid2.hap1.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 3140665 107252728 14583 582 31 Mesoplodon_bidens__Sowerbys_beaked_whale__HLmesBid2B__GCA_964148845.1 Mesoplodon bidens Sowerbys beaked whale Physeter bidens 48745 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesBid2B GCA_964148845.1 NCBI mMesBid2.hap2.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 3262972 109547138 14088 612 496 Mesoplodon_densirostris__Blainvilles_beaked_whale__HLmesDen2__GCA_025265405.1 Mesoplodon densirostris Blainvilles beaked whale 48708 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesDen2 GCA_025265405.1 NCBI mMesDen1 primary haplotype Chromosome 2022-09-19 Vertebrate Genomes Project 48253041 125805690 14607 576 13 Mesoplodon_europaeus__Gervais_beaked_whale__HLmesEur1 Mesoplodon europaeus Gervais beaked whale Gervais's beaked whale 27616 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesEur1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-12 44561 90973712 13259 972 965 Mesoplodon_mirus__Trues_beaked_whale__HLmesMir1A__GCA_964341445.1 Mesoplodon mirus Trues beaked whale 52113 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesMir1A GCA_964341445.1 NCBI mMesMir1.hap1.1 Chromosome 2024-11-28 WELLCOME SANGER INSTITUTE 3298322 115717908 14587 580 29 Mesoplodon_mirus__Trues_beaked_whale__HLmesMir1B__GCA_964341485.1 Mesoplodon mirus Trues beaked whale 52113 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesMir1B GCA_964341485.1 NCBI mMesMir1.hap2.1 Scaffold 2024-11-28 WELLCOME SANGER INSTITUTE 3514308 107903203 14585 576 35 Mesoplodon_stejnegeri__Stejnegers_beaked_whale__HLmesSte1 Mesoplodon stejnegeri Stejnegers beaked whale 52114 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Mesoplodon HLmesSte1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-13 31904 89064517 13096 986 1114 Ziphius_cavirostris__Cuviers_beaked_whale__HLzipCav1__GCA_004364475.1 Ziphius cavirostris Cuviers beaked whale goose-beaked whale 9760 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Ziphiidae; Ziphius HLzipCav1 GCA_004364475.1 NCBI ZipCav_v1_BIUU Scaffold 2019-03-22 Broad Institute 3606 3608 9351 1964 3881 Canis_aureus__Golden_jackal__HLcanAure1__GCF_053574225.1 Canis aureus Golden jackal 68724 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis HLcanAure1 GCF_053574225.1 NCBI VMU_Caureus_v.1.0 Chromosome 2025-11-21 University of Veterinary Medicine 56644425 68033816 15011 177 8 Canis_latrans__Coyote__HLcanLat1__GCA_034620425.1 Canis latrans Coyote 9614 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis HLcanLat1 GCA_034620425.1 NCBI Cla-1 Chromosome 2023-12-27 Texas A&M University 42015997 64494502 13134 2007 55 Canis_lupus__Gray_wolf__HLcanLup8__GCA_905319855.2 Canis lupus Gray wolf grey wolf 9612 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis HLcanLup8 GCA_905319855.2 NCBI mCanLor1.2 Chromosome 2021-03-26 WELLCOME SANGER INSTITUTE 34375412 65778685 14967 217 12 Canis_lupus_baileyi__Mexican_gray_wolf__HLcanLupBai8A__GCF_048164855.1 Canis lupus baileyi Mexican gray wolf grey wolf,Canis nubilus baileyi,gray wolf 143281 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus HLcanLupBai8A GCF_048164855.1 NCBI mCanLup2.hap1 Chromosome 2025-02-27 Vertebrate Genomes Project 31962680 65569260 14977 182 37 Canis_lupus_dingo__dingo__HLcanLupDin2 Canis lupus dingo dingo Canis dingo,gray wolf,Canis familiaris dingo,grey wolf 286419 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus HLcanLupDin2 DNA Zoo Consortium DNA Zoo Consortium 2022-07-14 5374581 63865217 14600 557 39 Canis_lupus_familiaris__Dog__HLcanLupFam7__GCF_014441545.1 Canis lupus familiaris Dog grey wolf,Canis lupus borealis,beagle dog,Canis domesticus,Canis borealis,Canis familiaris,Canis canis,dogs,gray wolf,beagle dogs 9615 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus HLcanLupFam7 GCF_014441545.1 NCBI ROS_Cfam_1.0 Chromosome 2020-09-03 The Roslin Institute 12024593 64037277 14669 507 20 Canis_lupus_familiaris__dog__canFam3__GCF_000002285.3 Canis lupus familiaris dog Canis familiaris,grey wolf,beagle dogs,dogs,beagle dog,Canis canis,gray wolf,Canis domesticus 9615 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus canFam3 GCF_000002285.3 NCBI CanFam3.1 Chromosome 2011-11-02 Dog Genome Sequencing Consortium 267478 45876610 13983 1092 121 Canis_lupus_familiaris__dog__canFam4__GCA_011100685.1 Canis lupus familiaris dog Canis canis,gray wolf,grey wolf,Canis familiaris,Canis domesticus,dogs,beagle dogs,beagle dog 9615 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus canFam4 GCA_011100685.1 NCBI UU_Cfam_GSD_1.0 Chromosome 2020-03-10 Uppsala University 14840767 64299765 14604 572 20 Canis_lupus_familiaris__dog__canFam5__GCA_005444595.1 Canis lupus familiaris dog beagle dogs,Canis domesticus,gray wolf,Canis familiaris,beagle dog,Canis canis,grey wolf,dogs 9615 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus canFam5 GCA_005444595.1 NCBI UMICH_Zoey_3.1 Chromosome 2019-05-30 University of Michigan 4722218 64204256 13836 1328 32 Canis_lupus_familiaris__dog__canFam6__GCF_000002285.5 Canis lupus familiaris dog beagle dog,grey wolf,beagle dogs,Canis canis,dogs,Canis domesticus,gray wolf,Canis familiaris 9615 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus canFam6 GCF_000002285.5 UCSC 2022-01-14 26759743 63738581 14610 551 35 Chrysocyon_brachyurus__maned_wolf__HLchrBra1 Chrysocyon brachyurus maned wolf 68728 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Chrysocyon HLchrBra1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-10 90967 60785871 14497 370 329 Lycaon_pictus__African_hunting_dog__HLlycPic3 Lycaon pictus African hunting dog ornate wolf,painted hunting dog,African wild dog 9622 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Lycaon HLlycPic3 DNA Zoo Consortium DNA Zoo Consortium 2020-07-12 97659 62683413 13847 914 435 Lycaon_pictus__African_hunting_dog__HLlycPict4A__GCA_040955705.1 Lycaon pictus African hunting dog painted hunting dog,ornate wolf,Hyaena picta,African wild dog 9622 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Lycaon HLlycPict4A GCA_040955705.1 NCBI LycPic1.final.hap2 Chromosome 2024-08-01 University of Copenhagen 39426608 64477381 15007 175 14 Lycaon_pictus__African_hunting_dog__HLlycPict4B__GCA_040955645.1 Lycaon pictus African hunting dog African wild dog,painted hunting dog,ornate wolf,Hyaena picta 9622 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Lycaon HLlycPict4B GCA_040955645.1 NCBI LycPic1.final.hap1 Chromosome 2024-08-01 University of Copenhagen 42609000 64347589 14505 212 479 Nyctereutes_procyonoides__raccoon_dog__HLnycPro4__GCA_905146905.1 Nyctereutes procyonoides raccoon dog Canis procyonoides 34880 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes HLnycPro4 GCA_905146905.1 NCBI NYPRO_anot_genome Scaffold 2021-02-14 Senckenber Biodiversity and Climate Research Centre Frankfurt 35077230 53959811 14720 460 16 Otocyon_megalotis__bat-eared_fox__HLotoMeg2 Otocyon megalotis bat-eared fox 9624 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Otocyon HLotoMeg2 DNA Zoo Consortium DNA Zoo Consortium 2021-11-01 616011 68620662 14357 622 217 Speothos_venaticus__Bush_dog__HLspeVen1__GCA_023170115.1 Speothos venaticus Bush dog Cynogale venatica 68741 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Speothos HLspeVen1 GCA_023170115.1 NCBI Speothos_venaticus_v01 Scaffold 2022-04-01 Center for Research and Education of Wildlife, Kyoto City Zoo 39174 111912 14332 437 427 Urocyon_cinereoargenteus__Gray_fox__HLuroCin1__GCA_032313775.1 Urocyon cinereoargenteus Gray fox Canis cinereoargenteus 55040 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Urocyon HLuroCin1 GCA_032313775.1 NCBI UCinereo1.0 Chromosome 2023-10-04 Washington State University 59386518 72908786 15007 176 13 Urocyon_littoralis_catalinae__Santa_Catalina_Island_fox__HLuroLitCat1 Urocyon littoralis catalinae Santa Catalina Island fox Vulpes littoralis 1621117 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Urocyon; Urocyon littoralis HLuroLitCat1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-11 124737 65046675 14239 448 509 Vulpes_corsac__Corsac_fox__HLvulCor1__GCA_030463245.1 Vulpes corsac Corsac fox Canis corsac 9629 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes HLvulCor1 GCA_030463245.1 NCBI zhanglab2022 Chromosome 2023-07-18 Qufu normal university 41624634 132204642 15004 184 8 Vulpes_ferrilata__Tibetan_sand_fox__HLvulFer1__GCA_024500485.1 Vulpes ferrilata Tibetan sand fox 561074 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes HLvulFer1 GCA_024500485.1 NCBI ASM2450048v1 Chromosome 2022-08-01 Qufu Normal University 52909674 133960477 15001 184 11 Vulpes_lagopus__Arctic_fox__HLvulLag2__GCF_018345385.1 Vulpes lagopus Arctic fox Alopex lagopus 494514 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes HLvulLag2 GCF_018345385.1 NCBI ASM1834538v1 Chromosome 2021-05-12 Hebei Normal University of Science and Technology 33460300 131537142 14805 374 17 Vulpes_vulpes__red_fox__HLvulVul2 Vulpes vulpes red fox silver fox,Canis vulpes 9627 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes HLvulVul2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-12 53406 139030359 14198 821 177 Vulpes_vulpes__Red_fox__HLvulVul3__GCA_048418805.1 Vulpes vulpes Red fox silver fox,Canis vulpes 9627 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes HLvulVul3 GCA_048418805.1 NCBI VulVul3 Chromosome 2025-03-05 Texas A&M University 55675583 139969695 14866 294 36 Vulpes_zerda__fennec_fox__HLvulZer1 Vulpes zerda fennec fox fennec,Fennecus zerda 68732 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes HLvulZer1 provided by Dong-Dong Wu provided by Dong-Dong Wu 2019-03-30 99962 15853869 14353 607 236 Ailurus_fulgens__lesser_panda__HLailFul2 Ailurus fulgens lesser panda red panda 9649 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Ailuridae; Ailurus HLailFul2 DNA Zoo Consortium DNA Zoo Consortium 2020-07-05 97931 143796361 14279 702 215 Mephitis_mephitis__Striped_skunk__HLmepMeph1__GCA_055769545.1 Mephitis mephitis Striped skunk Viverra mephitis 30548 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mephitidae; Mephitis HLmepMeph1 GCA_055769545.1 NCBI M.mephitis_ASK9808_v1.0 Scaffold 2026-03-10 The Hospital for Sick Children 39934464 42172126 15041 147 8 Spilogale_gracilis__western_spotted_skunk__HLspiGra1__GCA_004023965.1 Spilogale gracilis western spotted skunk 30551 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mephitidae; Spilogale HLspiGra1 GCA_004023965.1 NCBI SpiGra_v1_BIUU Scaffold 2019-01-15 Broad Institute 63054 85970 14199 386 611 Spilogale_interrupta__plains_spotted_skunk__HLspiInt1__GCA_023159085.1 Spilogale interrupta plains spotted skunk Spilogale putorius interrupta,Mephitis interrupta 2340998 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mephitidae; Spilogale HLspiInt1 GCA_023159085.1 NCBI UWYO_SpInte_0.1 Contig 2022-04-27 University of Wyoming 16718385 16718385 14344 844 8 Eira_barbara__Tayra__HLeirBar1__GCA_020311275.1 Eira barbara Tayra Mustela barbara 204263 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Eira HLeirBar1 GCA_020311275.1 NCBI ASM2031127v1 Scaffold 2021-10-05 Leibniz Institute for Zoo and Wildlife Research (IZW) 285064 42537617 14772 380 44 Gulo_gulo_luscus__American_wolverine__HLgulGulLus2__GCA_024510155.1 Gulo gulo luscus American wolverine Mustela gulo,Ursus luscus,wolverine 2888765 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Gulo; Gulo gulo HLgulGulLus2 GCA_024510155.1 NCBI Gulo_gulo_luscus_R-V1.0 Scaffold 2022-08-04 The Hospital for Sick Children 36583552 143980113 15045 137 14 Martes_flavigula__Yellow-throated_marten__HLmarFlav2__GCA_029410595.1 Martes flavigula Yellow-throated marten 74864 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarFlav2 GCA_029410595.1 NCBI ASM2941059v1 Chromosome 2023-03-27 Qufu Normal University 68603938 143113826 15042 147 7 Martes_flavigula__yellow-throated_marten__HLmarFlv1 Martes flavigula yellow-throated marten 74864 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarFlv1 DNA Zoo Consortium DNA Zoo Consortium 2021-10-16 141173 135435256 14296 477 423 Martes_foina__beach_marten__HLmarFoi1 Martes foina beach marten beech marten 9659 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarFoi1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-13 618789 144088726 14461 646 89 Martes_foina__Beach_marten__HLmarFoin2__GCA_964304585.1 Martes foina Beach marten Mustela foina,beech marten 9659 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarFoin2 GCA_964304585.1 NCBI mMarFoi2.1 Chromosome 2024-11-06 Centro Nacional de AnĂ¡lisis GenĂ³mico 64160893 146036623 15033 155 8 Martes_martes__European_pine_marten__HLmarMart2__GCA_963455335.1 Martes martes European pine marten Mustela martes 29065 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarMart2 GCA_963455335.1 NCBI mMarMar1.1 Chromosome 2023-09-20 WELLCOME SANGER INSTITUTE 1599794 146289188 14966 185 45 Martes_martes__European_pine_marten__HLmarMat1 Martes martes European pine marten 29065 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarMat1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-14 632693 144638580 14434 695 67 Martes_zibellina__sable__HLmarZib1__GCA_012583365.1 Martes zibellina sable Mustela zibellina 36722 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarZib1 GCA_012583365.1 NCBI ASM1258336v1 Scaffold 2020-04-20 Novogene 62196 5199373 14651 284 261 Martes_americana__American_marten__HLmarAmer4__GCA_057318585.1 Martes americana American marten Mustela americanus 9660 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Martes HLmarAmer4 GCA_057318585.1 NCBI mMarAme1_a1.1 Scaffold 2026-05-06 Canada's national platform for genome sequencing and analysis 11361609 136734559 14965 178 53 Pekania_pennanti__Fisher__HLpekPenn1__GCA_047676605.1 Pekania pennanti Fisher Martes pennanti 76720 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Guloninae; Pekania HLpekPenn1 GCA_047676605.1 NCBI ppen.pseudohap2.1 Scaffold 2025-02-11 Institute for Molecular and Cellular biology 235072 67201812 14597 525 74 Aonyx_cinereus__Asian_small-clawed_otter__HLaonCin1 Aonyx cinereus Asian small-clawed otter Amblonyx cinereus 452597 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Aonyx HLaonCin1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-10 68934 130942447 14297 382 517 Enhydra_lutris_kenyoni__sea_otter__enhLutKen1__GCF_002288905.1 Enhydra lutris kenyoni sea otter 391180 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Enhydra; Enhydra lutris enhLutKen1 GCF_002288905.1 NCBI ASM228890v2 Scaffold 2017-09-11 BC Cancer Agency 244529 38751465 14717 438 41 Enhydra_lutris_nereis__sea_otter__enhLutNer1__GCA_006410715.1 Enhydra lutris nereis sea otter 1049777 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Enhydra; Enhydra lutris enhLutNer1 GCA_006410715.1 NCBI ASM641071v1 Scaffold 2019-06-24 UCLA 23473 9763901 13372 514 1310 Lontra_canadensis__Northern_American_river_otter__HLlonCan1__GCA_010015895.1 Lontra canadensis Northern American river otter Lutra canadensis,river otter 76717 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra HLlonCan1 GCA_010015895.1 NCBI GSC_riverotter_1.0 Scaffold 2020-01-27 Canada's Genomic Enterprise 691969 18460785 14742 382 72 Lutra_lutra__Eurasian_river_otter__HLlutLut1__GCA_902655055.1 Lutra lutra Eurasian river otter European river otter,European otter 9657 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lutra HLlutLut1 GCA_902655055.1 NCBI mLutLut1.1 Chromosome 2020-01-11 SC 30403456 149004807 14533 653 10 Pteronura_brasiliensis__giant_otter__HLpteBra2 Pteronura brasiliensis giant otter 9672 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Pteronura HLpteBra2 DNA Zoo Consortium DNA Zoo Consortium 2020-08-29 97105 133376390 14635 291 270 Meles_meles__Eurasian_badger__HLmeeMel1__GCA_922984935.1 Meles meles Eurasian badger 9662 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Melinae; Meles HLmeeMel1 GCA_922984935.1 NCBI mMelMel3.1 paternal haplotype Chromosome 2021-12-19 WELLCOME SANGER INSTITUTE 75210923 132955750 14988 203 5 Mellivora_capensis__ratel__HLmelCap1__GCA_004024625.1 Mellivora capensis ratel honey badger 9664 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mellivoriane; Mellivora HLmelCap1 GCA_004024625.1 NCBI MelCap_v1_BIUU Scaffold 2019-01-15 Broad Institute 50213 59143 14367 343 486 Mustela_erminea__ermine__HLmusErm1__GCA_009829155.1 Mustela erminea ermine stoat,short-tailed weasel 36723 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusErm1 GCA_009829155.1 NCBI mMusErm1.Pri Chromosome 2020-01-03 Vertebrate Genomes Project 36329944 130149454 14832 357 7 Mustela_eversmannii__Steppe_polecat__HLmusEve1__GCA_963422785.1 Mustela eversmannii Steppe polecat Mustela eversmanni 77149 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusEve1 GCA_963422785.1 NCBI Steppe Polecat genome assembly Scaffold 2023-09-13 the earlham insitute 247290 64250083 13960 1120 116 Mustela_lutreola__European_mink__HLmusLut1__GCF_030435805.1 Mustela lutreola European mink mink 9666 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusLut1 GCF_030435805.1 NCBI mMusLut2.pri Chromosome 2023-07-13 Vertebrate Genomes Project 83356672 154078643 15032 161 3 Mustela_nigripes__black-footed_ferret__HLmusNig1__GCA_022355385.1 Mustela nigripes black-footed ferret 77151 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusNig1 GCA_022355385.1 NCBI MUSNIG.SB6536 Chromosome 2022-02-24 Smithsonian Institution 148763 145433501 14818 303 75 Mustela_nivalis__least_weasel__HLmusNiv1__GCA_019141155.1 Mustela nivalis least weasel 36239 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusNiv1 GCA_019141155.1 NCBI MusNiv_Pri1.0 Scaffold 2021-07-06 CIBIO-InBIO 195927 24899452 14661 425 110 Mustela_nivalis__Least_weasel__HLmusNiva2A__GCA_964662115.1 Mustela nivalis Least weasel 36239 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusNiva2A GCA_964662115.1 NCBI mMusNiv2.hap1.1 Chromosome 2025-01-03 WELLCOME SANGER INSTITUTE 1161649 115392379 14832 242 122 Mustela_sibirica__Siberian_weasel__HLmusSibi1__GCA_048197585.1 Mustela sibirica Siberian weasel 36240 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusSibi1 GCA_048197585.1 NCBI ASM4819758v1 Scaffold 2025-02-28 Institute of Molecular and Cellular Biology SB RAS 37900 48136 13610 464 1122 Mustela_strigidorsa__Black-striped_weasel__HLmusStr1__GCA_048197275.1 Mustela strigidorsa Black-striped weasel back-striped weasel 244218 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela HLmusStr1 GCA_048197275.1 NCBI ASM4819727v1 Chromosome 2025-02-27 Institute of Molecular and Cellular Biology SB RAS 189835 113335649 14169 625 402 Mustela_nivalis_vulgaris__Least_weasel__HLmusNivaVul3A__GCA_057128415.1 Mustela nivalis vulgaris Least weasel 3696914 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela; Mustela nivalis HLmusNivaVul3A GCA_057128415.1 NCBI mMusNiv1.hap1 Chromosome 2026-04-30 Vertebrate Genomes Project 18293025 116385262 14847 308 41 Mustela_putorius_furo__domestic_ferret__HLmusFur2__GCA_011764305.1 Mustela putorius furo domestic ferret Putorius putorius,European polecat,black ferret,ferret,Mustela furo 9669 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela; Mustela putorius HLmusFur2 GCA_011764305.1 NCBI ASM1176430v1 Contig 2020-03-27 JCVI 23598655 23598655 14859 307 30 Mustela_putorius_furo__domestic_ferret__HLmusPutFur2__GCF_011764305.1 Mustela putorius furo domestic ferret black ferret,European polecat,Mustela furo,Putorius putorius,ferret 9669 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela; Mustela putorius HLmusPutFur2 GCF_011764305.1 NCBI ASM1176430v1.1 Contig 2020-03-27 JCVI 23598655 23598655 14858 307 31 Neogale_vison__American_mink__HLneoVis2__GCF_020171115.1 Neogale vison American mink Neovison vison,mink,Mustela vison 452646 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale HLneoVis2 GCF_020171115.1 NCBI ASM_NN_V1 Chromosome 2021-09-29 Dalhousie University 220349319 220349319 15025 158 13 Neogale_vison__American_mink__HLneoViso3A__GCA_964106545.1 Neogale vison American mink mink,Neovison vison,Mustela vison 452646 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale HLneoViso3A GCA_964106545.1 NCBI mNeoVis2.hap1.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 1439238 221119109 14952 186 58 Neogale_felipei__Colombian_weasel__HLneoFeli1__GCA_058939665.1 Neogale felipei Colombian weasel Mustela felipei 3350059 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale HLneoFeli1 GCA_058939665.1 NCBI ASM5893966v1 Scaffold 2026-07-05 Iridian Genomes 4327 196022016 12363 1267 1566 Neogale_frenata__Long-tailed_weasel__HLneoFren1__GCA_058940655.1 Neogale frenata Long-tailed weasel Mustela frenata 3370370 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale HLneoFren1 GCA_058940655.1 NCBI ASM5894065v1 Scaffold 2026-07-05 Iridian Genomes 3070 196213696 11602 1546 2048 Taxidea_taxus_jeffersonii__American_badger__HLtaxTax1__GCA_003697995.1 Taxidea taxus jeffersonii American badger 2282171 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Taxidiinae; Taxidea; Taxidea taxus HLtaxTax1 GCA_003697995.1 NCBI ASM369799v1 Scaffold 2018-10-30 Canada's Genomic Enterprise 37750 54556 12087 852 2257 Bassaricyon_neblina__Olinguito__HLbasNebl1__GCA_056902615.1 Bassaricyon neblina Olinguito 1386914 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Bassaricyon HLbasNebl1 GCA_056902615.1 NCBI ASM5690261v1 Scaffold 2026-04-26 Iridian Genomes 9263 141080946 13246 565 1385 Bassariscus_astutus__ringtail__HLbasAst1 Bassariscus astutus ringtail 55047 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Bassariscus HLbasAst1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 39652 101529512 13316 708 1172 Bassariscus_sumichrasti__Cacomistle__HLbasSum1 Bassariscus sumichrasti Cacomistle 392507 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Bassariscus HLbasSum1 DNA Zoo Consortium DNA Zoo Consortium 2020-08-01 44551 125116104 13834 505 857 Nasua_narica__White-nosed_coati__HLnasNar1 Nasua narica White-nosed coati 352831 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Nasua HLnasNar1 DNA Zoo Consortium DNA Zoo Consortium 2020-08-02 64078 119764535 13639 684 873 Potos_flavus__kinkajou__HLpotFla1 Potos flavus kinkajou 29067 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Potos HLpotFla1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-10 64392 121721779 13828 497 871 Procyon_lotor__raccoon__HLproLot1 Procyon lotor raccoon northern raccoon 9654 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Procyon HLproLot1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-03 33842 114539748 12611 961 1624 Procyon_lotor__Raccoon__HLproLoto2__GCA_055474045.1 Procyon lotor Raccoon northern raccoon,Ursus lotor 9654 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Procyonidae; Procyon HLproLoto2 GCA_055474045.1 NCBI P.lotor_Micro_v1.0 Chromosome 2026-02-24 The Hospital for Sick Children 34520054 142471341 15064 125 7 Odobenus_rosmarus__walrus__HLodoRos1 Odobenus rosmarus walrus 9707 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus HLodoRos1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-05 85053 154349455 14820 315 61 Odobenus_rosmarus_divergens__Pacific_walrus__odoRosDiv1__GCF_000321225.1 Odobenus rosmarus divergens Pacific walrus walrus 9708 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus; Odobenus rosmarus odoRosDiv1 GCF_000321225.1 NCBI Oros_1.0 Scaffold 2013-01-16 Marine mammals 89951 2616778 14811 311 74 Arctocephalus_australis__South_American_fur_seal__HLarcAus1 Arctocephalus australis South American fur seal 161928 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Arctocephalus HLarcAus1 CNGB Sequence Archive CNGB Sequence Archive 2021-10-16 156290 140098749 14251 658 287 Arctocephalus_gazella__antarctic_fur_seal__HLarcGaz2__GCA_900642305.1 Arctocephalus gazella antarctic fur seal 37190 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Arctocephalus HLarcGaz2 GCA_900642305.1 NCBI arcGaz3 Scaffold 2019-02-08 LMU 537425 139181869 6418 8678 100 Arctocephalus_gazella__Antarctic_fur_seal__HLarcGaze3A__GCA_040869175.1 Arctocephalus gazella Antarctic fur seal 37190 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Arctocephalus HLarcGaze3A GCA_040869175.1 NCBI arcGaz4_h1 Scaffold 2024-07-25 Univeristy Bielefeld 55559406 141635559 15003 177 16 Arctocephalus_townsendi__Guadalupe_fur_seal__HLarcTow1 Arctocephalus townsendi Guadalupe fur seal 161921 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Arctocephalus HLarcTow1 DNA Zoo Consortium DNA Zoo Consortium 2021-09-20 60488 127156334 14226 473 497 Callorhinus_ursinus__northern_fur_seal__HLcalUrs1__GCA_003265705.1 Callorhinus ursinus northern fur seal Callorhynus ursius 34884 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus HLcalUrs1 GCA_003265705.1 NCBI ASM326570v1 Scaffold 2018-06-26 Canada's Genomics Enterprise 133024 31506801 14787 312 97 Eumetopias_jubatus__Steller_sea_lion__HLeumJub1__GCA_004028035.1 Eumetopias jubatus Steller sea lion Phoca jubata,northern sea lion 34886 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias HLeumJub1 GCA_004028035.1 NCBI ASM402803v1 Scaffold 2019-01-15 Canada's Genomic Enterprise 242372 14018600 14688 387 121 Eumetopias_jubatus__Steller_sea_lion__HLeumJuba2__GCA_037043125.1 Eumetopias jubatus Steller sea lion Phoca jubata,northern sea lion 34886 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Eumetopias HLeumJuba2 GCA_037043125.1 NCBI mEumJub1_p1.0 Scaffold 2024-03-07 Canada's Genomic Enterprise 61020890 142604627 14977 196 23 Otaria_byronia__South_American_sea_lion__HLotaByr1 Otaria byronia South American sea lion Otaria flavescens 161932 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Otaria HLotaByr1 CNGB Sequence Archive CNGB Sequence Archive 2021-10-16 182371 144693955 14215 649 332 Zalophus_californianus__California_sea_lion__HLzalCal1__GCA_009762305.1 Zalophus californianus California sea lion California sealion 9704 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus HLzalCal1 GCA_009762305.1 NCBI mZalCal1.pri Chromosome 2019-12-18 Vertebrate Genomes Project 60554208 146931682 14139 1046 11 Zalophus_californianus__California_sea_lion__HLzalCali2__GCF_009762305.2 Zalophus californianus California sea lion California sealion,Otaria californiana 9704 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus HLzalCali2 GCF_009762305.2 NCBI mZalCal1.pri.v2 Chromosome 2020-07-14 Vertebrate Genomes Project 32626160 147124152 14619 568 9 Hydrurga_leptonyx__Leopard_seal__HLhydLept1__GCA_050320145.1 Hydrurga leptonyx Leopard seal Phoca leptonyx 29086 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Lobodontini; Hydrurga HLhydLept1 GCA_050320145.1 NCBI ASM5032014v1 Scaffold 2025-05-12 Hampton University 99454515 99454515 15021 165 10 Leptonychotes_weddellii__Weddell_seal__HLlepWed2 Leptonychotes weddellii Weddell seal Leptonychotes weddelli 9713 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Lobodontini; Leptonychotes HLlepWed2 DNA Zoo Consortium DNA Zoo Consortium 2022-08-27 46355 131171632 13789 549 858 Mirounga_angustirostris__Northern_elephant_seal__HLmirAng2 Mirounga angustirostris Northern elephant seal 9716 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Miroungini; Mirounga HLmirAng2 DNA Zoo Consortium DNA Zoo Consortium 2020-07-03 75715 139676048 14393 386 417 Mirounga_leonina__Southern_elephant_seal__HLmirLeo1__GCA_011800145.1 Mirounga leonina Southern elephant seal 9715 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Miroungini; Mirounga HLmirLeo1 GCA_011800145.1 NCBI KU_Mleo_1.0 Scaffold 2020-03-31 Earth Biogenome Project 197908 54232831 14775 343 78 Monachus_monachus__Mediterranean_monk_seal__HLmonMona1__GCA_976986665.1 Monachus monachus Mediterranean monk seal Phoca monachus 248254 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Monachini; Monachus HLmonMona1 GCA_976986665.1 NCBI mMonMoa1.1 Chromosome 2025-11-08 NBIS (National Bioinformatics Infrastructure Sweden) 90875510 157001452 15004 183 9 Neomonachus_schauinslandi__Hawaiian_monk_seal__HLneoSch2 Neomonachus schauinslandi Hawaiian monk seal Monachus schauinslandi 29088 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Monachini; Neomonachus HLneoSch2 DNA Zoo Consortium DNA Zoo Consortium 2021-11-01 455907 149571140 14225 853 118 Neomonachus_schauinslandi__Hawaiian_monk_seal__neoSch1__GCF_002201575.1 Neomonachus schauinslandi Hawaiian monk seal Monachus schauinslandi 29088 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Monachinae; Monachini; Neomonachus neoSch1 GCF_002201575.1 NCBI ASM220157v1 Scaffold 2017-06-20 Johns Hopkins University 112698 29518589 14378 671 147 Erignathus_barbatus__bearded_seal__HLeriBar1 Erignathus barbatus bearded seal 39304 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Erignathus HLeriBar1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-03 45719 133069726 14052 435 709 Halichoerus_grypus__gray_seal__HLhalGry1__GCA_012393455.1 Halichoerus grypus gray seal grey seal 9711 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Halichoerus HLhalGry1 GCA_012393455.1 NCBI Tufts_HGry_1.1 Scaffold 2020-04-16 Cummings School of Veterinary Medicine at Tufts University 1011981 1033864 13684 1093 419 Halichoerus_grypus__gray_seal__HLhalGry2 Halichoerus grypus gray seal grey seal 9711 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Halichoerus HLhalGry2 DNA Zoo Consortium DNA Zoo Consortium 2022-06-06 61614 141565142 14188 411 597 Halichoerus_grypus__Gray_seal__HLhalGryp3A__GCA_964656455.1 Halichoerus grypus Gray seal grey seal,Phoca grypus 9711 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Halichoerus HLhalGryp3A GCA_964656455.1 NCBI mHalGry1.hap1.1 Chromosome 2025-01-02 WELLCOME SANGER INSTITUTE 3750431 156124300 14977 183 36 Phoca_largha__spotted_seal__HLphoLar1 Phoca largha spotted seal 39090 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Phoca HLphoLar1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 55127 142074308 14258 422 516 Phoca_vitulina__harbor_seal__HLphoVit1__GCA_004348235.1 Phoca vitulina harbor seal 9720 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Phoca HLphoVit1 GCA_004348235.1 NCBI GSC_HSeal_1.0 Scaffold 2019-02-11 Canada's Genome Enterprise (CGEN) 283887 41024070 14779 347 70 Pusa_caspica__Caspian_seal__HLpusCasp1__GCA_048197345.1 Pusa caspica Caspian seal Phoca caspica 693431 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Pusa HLpusCasp1 GCA_048197345.1 NCBI Pca_SM Scaffold 2025-02-27 Interdisciplinary Centre of Marine and Environmental Research (CIIMAR) / University of Porto 22514 45928 13335 438 1423 Pusa_saimensis__Ringed_seal__HLpusHisSai1__GCA_947044825.1 Pusa saimensis Ringed seal Pusa hispida saimensis,Phoca hispida,Phoca hispida saimensis 248495 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Pusa HLpusHisSai1 GCA_947044825.1 NCBI Saimaa ringed seal draft genome Contig 2023-02-03 Institute of Biotechnology, University of Helsinki 3664905 3664905 14753 361 82 Pusa_sibirica__Baikal_seal__HLpusSib1 Pusa sibirica Baikal seal Phoca sibirica 9719 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Pusa HLpusSib1 CNGB Sequence Archive CNGB Sequence Archive 2021-10-16 191851 157524438 14181 695 320 Pusa_hispida_botnica__Ringed_seal__HLpusHisBot1__GCA_947044835.1 Pusa hispida botnica Ringed seal Phoca hispida,Phoca hispida botnica 248493 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Phocinae; Pusa; Pusa hispida HLpusHisBot1 GCA_947044835.1 NCBI Baltic ringed seal contig-level genome assembly Scaffold 2024-10-02 Institute of Biotechnology, University of Helsinki 154774 20988557 14685 393 118 Ailuropoda_melanoleuca__giant_panda__HLailMel2__GCA_002007445.2 Ailuropoda melanoleuca giant panda 9646 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda HLailMel2 GCA_002007445.2 NCBI ASM200744v2 Chromosome 2020-04-20 Institute of Zoology, Chinese Academy of Sciences 127363 129245720 13703 1064 429 Ailuropoda_melanoleuca__giant_panda__HLailMel3__GCA_029963865.1 Ailuropoda melanoleuca giant panda 9646 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda HLailMel3 GCA_029963865.1 NCBI CPB_AME_v1 Chromosome 2023-05-12 Sichuan Key Laboratory of Conservation Biology on Endangered Wildlife 28556066 134169173 13652 1528 16 Helarctos_malayanus__Malayan_sun_bear__HLhelMal1 Helarctos malayanus Malayan sun bear Ursus malayanus,sun bear 9634 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Helarctos HLhelMal1 DNA Zoo Consortium DNA Zoo Consortium 2021-05-21 73286 59704986 14293 345 558 Tremarctos_ornatus__spectacled_bear__HLtreOrn2 Tremarctos ornatus spectacled bear 9638 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Tremarctos HLtreOrn2 DNA Zoo Consortium DNA Zoo Consortium 2021-09-20 116620 104741234 14683 229 284 Tremarctos_ornatus__Spectacled_bear__HLtreOrna3__GCA_054642835.1 Tremarctos ornatus Spectacled bear Ursus ornatus 9638 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Tremarctos HLtreOrna3 GCA_054642835.1 NCBI mTreOrn2.0.pri Chromosome 2026-01-21 University of California, Santa Cruz 61126696 106594636 15075 105 16 Ursus_americanus__American_black_bear__HLursAme3__GCF_020975775.1 Ursus americanus American black bear Euarctos americanus 9643 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus HLursAme3 GCF_020975775.1 NCBI gsc_jax_bbear_1.0 Contig 2021-11-24 Jackson Laboratory 13882922 13882922 14537 615 44 Ursus_arctos__brown_bear__HLursArc2__GCF_023065955.1 Ursus arctos brown bear grizzly bear 9644 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus HLursArc2 GCF_023065955.1 NCBI UrsArc1.0 Scaffold 2022-04-20 Washington State University 43943000 70076652 15021 164 11 Ursus_maritimus__polar_bear__HLursMar2__GCF_017311325.1 Ursus maritimus polar bear white bear,Thalarctos maritimus 29073 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus HLursMar2 GCF_017311325.1 NCBI ASM1731132v1 Scaffold 2021-03-09 University of California, Santa Cruz 206653 72237886 14658 511 27 Ursus_americanus__American_black_bear__HLursAmer4__GCA_024610735.2 Ursus americanus American black bear Euarctos americanus 9643 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus HLursAmer4 GCA_024610735.2 NCBI mUrsAme1.1.p Chromosome 2025-07-14 UCLA 58859121 73012699 15010 176 10 Ursus_thibetanus_thibetanus__Asiatic_black_bear__HLursThi1__GCA_009660055.1 Ursus thibetanus thibetanus Asiatic black bear Selenarctos thibetanus 441215 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus; Ursus thibetanus HLursThi1 GCA_009660055.1 NCBI ASM966005v1 Scaffold 2019-11-13 Northwestern Polytechnical University 145966 26803000 14777 314 105 Cryptoprocta_ferox__fossa__HLcryFer2 Cryptoprocta ferox fossa 94188 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Eupleridae; Euplerinae; Cryptoprocta HLcryFer2 DNA Zoo Consortium DNA Zoo Consortium 2020-07-31 123817 107277967 14523 334 339 Acinonyx_jubatus__cheetah__HLaciJub2__GCA_003709585.1 Acinonyx jubatus cheetah 32536 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Acinonyx HLaciJub2 GCA_003709585.1 NCBI Aci_jub_2 Scaffold 2018-10-22 Felidae consortium 179924 48500042 14776 361 59 Acinonyx_jubatus__cheetah__HLaciJub3__GCF_027475565.1 Acinonyx jubatus cheetah Felis jubata 32536 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Acinonyx HLaciJub3 GCF_027475565.1 NCBI VMU_Ajub_asm_v1.0 Chromosome 2022-12-28 University of Veterinary Medicine 96827784 144444042 15038 148 10 Caracal_caracal__caracal__HLcarCaa1__GCA_016801355.1 Caracal caracal caracal Felis caracal,Profelis caracal 61394 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Caracal HLcarCaa1 GCA_016801355.1 NCBI CarCar1.0 Scaffold 2021-02-02 Felidae consortium 32916 2085423 14662 305 229 Felis_catus__Domestic_cat__HLfelCatu10__GCA_051911835.1 Felis catus Domestic cat cats,cat,Korat cats,Felis domesticus,Felis silvestris catus 9685 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis HLfelCatu10 GCA_051911835.1 NCBI F.catus_OcraZ1_1.0 Complete Genome 2025-08-11 Ocra Biotechnology Co., Limited 149421202 149421202 15065 123 8 Felis_chaus__jungle_cat__HLfelCha1__GCA_019924945.1 Felis chaus jungle cat 61376 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis HLfelCha1 GCA_019924945.1 NCBI FelChav1.0 Chromosome 2021-09-14 Texas A&M University 91188488 148552997 15066 124 6 Felis_nigripes__black-footed_cat__HLfelNig2 Felis nigripes black-footed cat 61379 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis HLfelNig2 DNA Zoo Consortium DNA Zoo Consortium 2021-04-11 50376 139656774 14161 366 669 Felis_catus__domestic_cat__felCat9__GCF_000181335.3 Felis catus domestic cat Felis domesticus,cats,Felis silvestris catus,cat 9685 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis felCat9 GCF_000181335.3 NCBI Felis_catus_9.0 Chromosome 2017-11-20 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine 41915695 83967707 14280 905 11 Herpailurus_yagouaroundi__jaguarundi__HLpumYag1__GCA_014898765.1 Herpailurus yagouaroundi jaguarundi Herpailurus yaguarondi,Puma yagouaroundii 1608482 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Herpailurus HLpumYag1 GCA_014898765.1 NCBI PumYag Scaffold 2020-10-20 Felidae consortium 100211 49273425 14523 506 167 Leopardus_tigrinus__little_spotted_cat__HLleoTig1 Leopardus tigrinus little spotted cat Felis tigrinus,Felis tigrina 46842 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leopardus HLleoTig1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-10 35353 135699945 13646 554 996 Leopardus_geoffroyi__Geoffroys_cat__HLleoGeof1__GCF_018350155.1 Leopardus geoffroyi Geoffroys cat Felis geoffroyi,Oncifelis geoffroyi 46844 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leopardus HLleoGeof1 GCF_018350155.1 NCBI O.geoffroyi_Oge1_pat1.0 Chromosome 2021-05-13 Texas A&M University 104474415 152606360 14940 252 4 Leopardus_pardalis_albescens__Ocelot__HLleoPardAlb1__GCA_058742865.1 Leopardus pardalis albescens Ocelot Felis pardalis,Felis albescens,Leopardus pardalis albascens 1051137 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leopardus; Leopardus pardalis HLleoPardAlb1 GCA_058742865.1 NCBI TAMU_Opar_alb_1.0 Chromosome 2026-06-30 Texas A&M University 84057778 154776197 15054 134 8 Leptailurus_serval__Serval__HLlepServ1__GCA_056512435.1 Leptailurus serval Serval Profelis serval,Felis serval 61405 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leptailurus HLlepServ1 GCA_056512435.1 NCBI TAMU_L.serval_SxD256_v1.0.pat Chromosome 2026-04-01 Texas A&M University 112248064 147503762 15031 159 6 Lynx_canadensis__Canada_lynx__HLlynCan1__GCA_007474595.1 Lynx canadensis Canada lynx Felis canadensis 61383 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx HLlynCan1 GCA_007474595.1 NCBI mLynCan4_v1.p Chromosome 2019-07-26 Vertebrate Genomes Project 7503561 146106016 13861 1253 82 Lynx_canadensis__Canada_lynx__HLlynCana2__GCF_007474595.2 Lynx canadensis Canada lynx Felis canadensis 61383 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx HLlynCana2 GCF_007474595.2 NCBI mLynCan4.pri.v2 Chromosome 2020-07-14 Vertebrate Genomes Project 7503561 147275701 13860 1250 86 Lynx_pardinus__Spanish_lynx__HLlynPar1__GCA_900661375.1 Lynx pardinus Spanish lynx Felis pardina 191816 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx HLlynPar1 GCA_900661375.1 NCBI LYPA1.0 Scaffold 2019-03-28 CNAG 99542 1519745 13600 885 711 Lynx_rufus__bobcat__HLlynRuf1__GCA_022079265.1 Lynx rufus bobcat Felis rufus 61384 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Lynx HLlynRuf1 GCA_022079265.1 NCBI mLynRuf1.p Scaffold 2022-02-08 UCLA 66217191 142134035 14954 233 9 Otocolobus_manul__Pallas_cat__HLotoMan1 Otocolobus manul Pallas cat Felis manul 61408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Otocolobus HLotoMan1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-08 28432 130296758 13507 534 1155 Otocolobus_manul__Pallas_cat__HLotoManu2__GCA_028564725.2 Otocolobus manul Pallas cat Felis manul 61408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Otocolobus HLotoManu2 GCA_028564725.2 NCBI OtoMan_p1.0 Chromosome 2023-11-27 University of Minnnesota 118180270 151944179 14288 900 8 Prionailurus_bengalensis__leopard_cat__HLpriBen2__GCF_016509475.1 Prionailurus bengalensis leopard cat Felis bengalensis 37029 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus HLpriBen2 GCF_016509475.1 NCBI Fcat_Pben_1.1_paternal_pri Chromosome 2021-01-06 Texas A&M University 82622880 148587958 14730 454 12 Prionailurus_iriomotensis__Iriomote_cat__HLpriIri1__GCA_018403415.1 Prionailurus iriomotensis Iriomote cat Mayailurus iriomotensis,Felis iriomotensis,Prionailurus bengalensis iriomotensis 37030 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus HLpriIri1 GCA_018403415.1 NCBI P_iriomotensis_scaffold_01 Scaffold 2021-03-31 Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies 27846 102082 14566 276 354 Prionailurus_viverrinus__fishing_cat__HLpriViv3__GCF_022837055.1 Prionailurus viverrinus fishing cat Felis viverrina 61388 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus HLpriViv3 GCF_022837055.1 NCBI UM_Priviv_1.0 Chromosome 2022-04-08 University of Missouri 68766634 144906162 15004 184 8 Puma_concolor__puma__HLpumCon1__GCA_003327715.1 Puma concolor puma Felis concolor,Panthera concolor 9696 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma HLpumCon1 GCA_003327715.1 NCBI PumCon1.0 Scaffold 2018-07-19 Broad Institute 27187 100532876 12698 1281 1217 Puma_concolor__Puma__HLpumConc2A__GCA_028749985.4 Puma concolor Puma Panthera concolor,Felis concolor 9696 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma HLpumConc2A GCA_028749985.4 NCBI mPumCon1.1.hap1 Chromosome 2023-08-04 UCLA 42297498 149756039 14821 268 107 Neofelis_diardi__Sunda_clouded_leopard__HLneoDia1__GCA_027422475.1 Neofelis diardi Sunda clouded leopard Felis diardi,Neofelis nebulosa diardi 427616 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Neofelis HLneoDia1 GCA_027422475.1 NCBI ASM2742247v1 Scaffold 2022-12-27 Smithsonian Institution 49020 1386763 14654 327 215 Neofelis_nebulosa__Clouded_leopard__HLneoNeb2__GCF_028018385.1 Neofelis nebulosa Clouded leopard Felis nebulosa 61452 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Neofelis HLneoNeb2 GCF_028018385.1 NCBI mNeoNeb1.pri Chromosome 2023-01-31 Vertebrate Genomes Project 51579577 150204169 15004 178 14 Panthera_leo__lion__HLpanLeo2__GCF_018350215.1 Panthera leo lion Leo leo 9689 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanLeo2 GCF_018350215.1 NCBI P.leo_Ple1_pat1.1 Chromosome 2021-05-13 Texas A&M University 77781637 147402474 14371 348 477 Panthera_leo__Lion__HLpanLeo3A__GCA_046255005.1 Panthera leo Lion Felis leo,Leo leo 9689 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanLeo3A GCA_046255005.1 NCBI Pleo_Luke_hap2X Chromosome 2024-12-23 Smithsonian Institution 28885624 149413159 15017 167 12 Panthera_leo__Lion__HLpanLeo3B__GCA_046254995.1 Panthera leo Lion Leo leo,Felis leo 9689 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanLeo3B GCA_046254995.1 NCBI Pleo_Luke_hap1Y Chromosome 2024-12-23 Smithsonian Institution 36060956 148784156 14186 508 502 Panthera_onca__jaguar__HLpanOnc1__GCA_004023805.1 Panthera onca jaguar 9690 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanOnc1 GCA_004023805.1 NCBI PanOnc_v1_BIUU Scaffold 2019-01-15 Broad Institute 62836 116574 14407 292 497 Panthera_onca__jaguar__HLpanOnc2 Panthera onca jaguar 9690 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanOnc2 DNA Zoo Consortium DNA Zoo Consortium 2020-08-08 50688 132627732 13841 504 851 Panthera_onca__Jaguar__HLpanOnca3A__GCA_046562875.1 Panthera onca Jaguar 9690 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanOnca3A GCA_046562875.1 NCBI mPanOnc1 haplotype 2 Chromosome 2025-01-08 Genomics of Brazilian Biodiversity 42469011 148260853 15030 146 20 Panthera_pardus__leopard__HLpanPar2__GCA_024362965.1 Panthera pardus leopard Leo pardus 9691 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanPar2 GCA_024362965.1 NCBI ASM2436296v1 Scaffold 2022-07-21 Stanford University 22236240 126810544 14573 612 11 Panthera_tigris__tiger__HLpanTig3__GCF_018350195.1 Panthera tigris tiger Felis tigris 9694 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanTig3 GCF_018350195.1 NCBI P.tigris_Pti1_mat1.1 Chromosome 2021-05-13 Texas A&M University 74391967 146942463 14879 305 12 Panthera_uncia__snow_leopard__HLpanUnc1 Panthera uncia snow leopard Uncia uncia,Felis uncia 29064 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanUnc1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-12 64649 141103905 14381 321 494 Panthera_uncia__Snow_leopard__HLpanUnci2__GCA_048603155.1 Panthera uncia Snow leopard Uncia uncia,Felis uncia 29064 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera HLpanUnci2 GCA_048603155.1 NCBI ASM4860315v1 Chromosome 2025-03-18 Institute of Zoology, Chinese Academy of Sciences 107742994 147847344 15038 151 7 Helogale_parvula__dwarf_mongoose__HLhelPar1__GCA_004023845.1 Helogale parvula dwarf mongoose 210647 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Herpestidae; Helogale HLhelPar1 GCA_004023845.1 NCBI HelPar_v1_BIUU Scaffold 2019-01-15 Broad Institute 113567 179119 14277 413 506 Mungos_mungo__banded_mongoose__HLmunMug1__GCA_004023785.1 Mungos mungo banded mongoose Viverra mungo 210652 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Herpestidae; Mungos HLmunMug1 GCA_004023785.1 NCBI MunMun_v1_BIUU Scaffold 2019-01-15 Broad Institute 180702 236501 14463 359 374 Suricata_suricatta__meerkat__HLsurSur2__GCA_004023905.1 Suricata suricatta meerkat suricate,slender-tailed meerkat 37032 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Herpestidae; Suricata HLsurSur2 GCA_004023905.1 NCBI SurSur_v1_BIUU Scaffold 2019-01-15 Broad Institute 148487 186735 14330 399 467 Urva_auropunctata__small_Indian_mongoose__HLurvAur1 Urva auropunctata small Indian mongoose Herpestes auropunctatus,Herpestes auropunctata 48418 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Herpestidae; Urva HLurvAur1 DNA Zoo Consortium DNA Zoo Consortium 2024-10-07 79093 132835555 14101 482 613 Crocuta_crocuta__spotted_hyena__HLcroCro2 Crocuta crocuta spotted hyena 9678 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Crocuta HLcroCro2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-26 60238 101812163 13940 467 789 Hyaena_hyaena__striped_hyena__HLhyaHya1__GCA_003009895.1 Hyaena hyaena striped hyena 95912 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena HLhyaHya1 GCA_003009895.1 NCBI ASM300989v1 Scaffold 2018-03-19 Potsdam University 311202 2001327 14861 263 72 Proteles_cristata_cristata__aardwolf__HLproCriCri1__GCA_017311185.1 Proteles cristata cristata aardwolf Proteles cristatus 2793304 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Proteles; Proteles cristata HLproCriCri1 GCA_017311185.1 NCBI Proteles_cristatus_TS307_19_07_2019 Scaffold 2021-03-09 CNRS 1258344 1308801 14065 543 588 Paguma_larvata__Masked_palm_civet__HLpagLar1__GCA_030068075.1 Paguma larvata Masked palm civet Gulo larvatus 9675 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Viverridae; Paradoxurinae; Paguma HLpagLar1 GCA_030068075.1 NCBI ASM3006807v1 Chromosome 2023-06-05 Institute of Zoology, Guangdong Academy of Sciences 12856992 111806299 13905 1270 21 Paradoxurus_hermaphroditus__Asian_palm_civet__HLparHer1__GCA_004024585.1 Paradoxurus hermaphroditus Asian palm civet 71117 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Carnivora; Feliformia; Viverridae; Paradoxurinae; Paradoxurus HLparHer1 GCA_004024585.1 NCBI ParHer_v1_BIUU Scaffold 2019-01-15 Broad Institute 62870 71823 13403 631 1162 Rhynchonycteris_naso__Proboscis_bat__HLrhyNas2A__GCA_037038545.1 Rhynchonycteris naso Proboscis bat Vespertilio naso 249017 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Emballonurinae; Rhynchonycteris HLrhyNas2A GCA_037038545.1 NCBI mRhyNas2.hap1 Chromosome 2024-03-06 Bat1K Project 86271459 286991050 14795 373 28 Rhynchonycteris_naso__Proboscis_bat__HLrhyNas2B__GCA_037038555.1 Rhynchonycteris naso Proboscis bat Vespertilio naso 249017 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Emballonurinae; Rhynchonycteris HLrhyNas2B GCA_037038555.1 NCBI mRhyNas2.hap2 Chromosome 2024-03-06 Bat1K Project 108301702 288038771 14264 387 545 Saccopteryx_bilineata__greater_sac-winged_bat__HLsacBil1__GCF_036850765.1 Saccopteryx bilineata greater sac-winged bat 59482 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Emballonurinae; Saccopteryx HLsacBil1 GCF_036850765.1 NCBI, Bat1K 2020-11-04 20047694 300074216 14809 369 18 Saccopteryx_leptura__lesser_sac-winged_bat__HLsacLep1__GCF_036850995.1 Saccopteryx leptura lesser sac-winged bat 249018 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Emballonurinae; Saccopteryx HLsacLep1 GCF_036850995.1 NCBI, Bat1K 2021-04-17 17619988 224759591 14807 353 36 Taphozous_melanopogon__black-bearded_tomb_bat__HLtapMel2 Taphozous melanopogon black-bearded tomb bat 187003 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Taphozoinae; Taphozous HLtapMel2 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-25 166283 123333799 14571 355 270 Taphozous_melanopogon__black-bearded_tomb_bat__HLtapMel1__GCA_044509165.1 Taphozous melanopogon black-bearded tomb bat 187003 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Taphozoinae; Taphozous HLtapMel1 GCA_044509165.1 Huabin Zhao 2024-05-22 47053424 126147252 14493 689 14 Furipterus_horrens__thumbless_bat__HLfurHor1__GCA_987537825.1 Furipterus horrens thumbless bat 148082 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Furipteridae; Furipterus HLfurHor1 GCA_987537825.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-11-22 39349873 193909341 14849 334 13 Miniopterus_natalensis__Natal_long-fingered_bat__HLminNat1__GCA_001595765.1 Miniopterus natalensis Natal long-fingered bat Miniopterus schreibersii natalensis 291302 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminNat1 GCA_001595765.1 NCBI Mnat.v1 Scaffold 2016-03-22 University of California, San Francisco 29777 4315193 13630 716 850 Miniopterus_schreibersii__Schreibers_long-fingered_bat__HLminSch1__GCA_004026525.1 Miniopterus schreibersii Schreibers long-fingered bat Schreibers's long-fingered bat,Common bent-wing bat,Miniopterus schreibersi 9433 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminSch1 GCA_004026525.1 NCBI MinSch_v1_BIUU Scaffold 2019-01-16 Broad Institute 82539 108707 14313 472 411 Miniopterus_schreibersii__Schreibers_long-fingered_bat__HLminSch2A__GCA_964146895.1 Miniopterus schreibersii Schreibers long-fingered bat Schreibers's long-fingered bat,Miniopterus schreibersi,Common bent-wing bat 9433 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminSch2A GCA_964146895.1 NCBI mMinSch1.hap1.1 Chromosome 2024-06-06 WELLCOME SANGER INSTITUTE 2292542 86279620 14890 256 50 Miniopterus_schreibersii__Schreibers_long-fingered_bat__HLminSch2B__GCA_964145185.1 Miniopterus schreibersii Schreibers long-fingered bat Schreibers's long-fingered bat,Common bent-wing bat,Miniopterus schreibersi 9433 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminSch2B GCA_964145185.1 NCBI mMinSch1.hap2.1 Scaffold 2024-06-04 WELLCOME SANGER INSTITUTE 2346505 84995947 14331 292 573 Miniopterus_schreibersii__Schreibers_long-fingered_bat__HLminSchr3A__GCA_964146895.2 Miniopterus schreibersii Schreibers long-fingered bat Miniopterus schreibersi,Schreibers's long-fingered bat,Common bent-wing bat 9433 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminSchr3A GCA_964146895.2 NCBI mMinSch1.hap1.2 Chromosome 2025-04-05 WELLCOME SANGER INSTITUTE 28014000 87795433 14960 228 8 Miniopterus_schreibersii__Schreibers_long-fingered_bat__HLminSchr3B__GCA_964145185.2 Miniopterus schreibersii Schreibers long-fingered bat Schreibers's long-fingered bat,Miniopterus schreibersi,Common bent-wing bat 9433 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminSchr3B GCA_964145185.2 NCBI mMinSch1.hap2.2 Scaffold 2025-04-05 WELLCOME SANGER INSTITUTE 31768015 87054363 14408 259 529 Miniopterus_fuliginosus__Japanese_long-fingered_bat__HLminFuli1__GCA_051201465.1 Miniopterus fuliginosus Japanese long-fingered bat Miniopterus schreibersii fuliginosus,Eastern bent-winged bat,Vespertilio fuliginosa 187007 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminFuli1 GCA_051201465.1 NCBI ASM5120146v1 Contig 2025-07-03 Chinese Academy of Sciences 52416241 52416241 14333 728 135 Miniopterus_australis__little_long-fingered_bat__HLminAus1__GCA_985616665.1 Miniopterus australis little long-fingered bat 117605 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminAus1 GCA_985616665.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-11-22 44086281 84057630 14880 307 9 Miniopterus_natalensis__Natal_long-fingered_bat__HLminNat2A__GCA_054644295.1 Miniopterus natalensis Natal long-fingered bat Vespertilio natalensis,Miniopterus schreibersii natalensis 291302 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus HLminNat2A GCA_054644295.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-09-01 27957764 87828664 14926 259 11 Cynomops_mexicanus__Mexican_dog-faced_bat__HLcynMexi1__GCA_976999295.1 Cynomops mexicanus Mexican dog-faced bat Cynomops greenhalli mexicanus,Molossops greenhalli mexicanus 1833835 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Cynomops HLcynMexi1 GCA_976999295.1 NCBI Cymx_v3.1 Scaffold 2025-11-08 Instituto Politecnico Nacional 21894575 81961660 14226 942 28 Eumops_nanus__Northern_Dwarf_Bonneted_Bat__HLeumNan1A__GCA_058972175.1 Eumops nanus Northern Dwarf Bonneted Bat Eumops bonariensis nanus 1246553 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Eumops HLeumNan1A GCA_058972175.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-09-01 66316130 114501365 14857 307 32 Molossus_alvarezi__Alvarezs_mastiff_bat__HLmolAlv1__GCA_031001765.1 Molossus alvarezi Alvarezs mastiff bat 1552295 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolAlv1 GCA_031001765.1 NCBI BBF_mMolAlv_v1 Scaffold 2023-08-30 Bat1K 4060325 113916765 14800 362 34 Molossus_alvarezi__Alvarezs_mastiff_bat__HLmolAlv2A__GCA_037157525.1 Molossus alvarezi Alvarezs mastiff bat 1552295 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolAlv2A GCA_037157525.1 NCBI mMolAlv2.hap1 Chromosome 2024-03-15 Bat1K Project 63410948 112651663 14941 244 11 Molossus_alvarezi__Alvarezs_mastiff_bat__HLmolAlv2B__GCA_037176705.1 Molossus alvarezi Alvarezs mastiff bat 1552295 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolAlv2B GCA_037176705.1 NCBI mMolAlv2.hap2 Chromosome 2024-03-15 Bat1K Project 69284146 113334338 14949 238 9 Molossus_molossus__Pallass_mastiff_bat__HLmolMol2__GCA_014108415.1 Molossus molossus Pallass mastiff bat 27622 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolMol2 GCA_014108415.1 NCBI, Bat1K 2019-04-28 21658165 110665204 14822 351 23 Molossus_nigricans__northern_black_mastiff_bat__HLmolNig1__GCA_026936385.1 Molossus nigricans northern black mastiff bat 2997257 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolNig1 GCA_026936385.1 NCBI BBF_mMolNig1_v1 Scaffold 2022-12-16 Bat1K 21886250 81933988 14887 279 30 Molossus_nigricans__Northern_black_mastiff_bat__HLmolNig2A__GCA_039880945.1 Molossus nigricans Northern black mastiff bat 2997257 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolNig2A GCA_039880945.1 NCBI mMolNig1.hap1 Chromosome 2024-05-29 Bat1K Project 74731956 114338547 14927 255 14 Molossus_nigricans__Northern_black_mastiff_bat__HLmolNig2B__GCA_039880925.1 Molossus nigricans Northern black mastiff bat 2997257 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus HLmolNig2B GCA_039880925.1 NCBI mMolNig1.hap2 Chromosome 2024-05-29 Bat1K Project 73223485 112648841 14412 258 526 Mops_condylurus__Angolan_free-tailed_bat__HLmopCon1__GCA_043748645.1 Mops condylurus Angolan free-tailed bat 258863 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Mops HLmopCon1 GCA_043748645.1 NCBI, Bat1K 2021-09-08 56964224 105478936 14765 372 59 Mops_plicatus__wrinkle-lipped_free-tailed_bat__HLmopPli2 Mops plicatus wrinkle-lipped free-tailed bat Vespertilio plicatus,Tadarida plicata,Chaerephon plicatus 3370289 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Mops HLmopPli2 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-25 76860 1134047 13853 630 713 Tadarida_brasiliensis__Brazilian_free-tailed_bat__HLtadBra3__GCA_030848825.1 Tadarida brasiliensis Brazilian free-tailed bat 9438 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Tadarida HLtadBra3 GCA_030848825.1 NCBI DD_mTadBra1_pri Complete Genome 2023-08-22 Bat1K 86333355 111098925 14980 203 13 Tadarida_teniotis__European_free-tailed_bat__HLtadTeni1A__GCA_976988885.1 Tadarida teniotis European free-tailed bat Cephalotes teniotis 59483 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Tadarida HLtadTeni1A GCA_976988885.1 NCBI mTadTen1.hap1.1 Chromosome 2025-11-08 WELLCOME SANGER INSTITUTE 53136000 115364848 14968 212 16 Mormoops_blainvillei__Antillean_ghost-faced_bat__HLmorBla1__GCA_004026545.1 Mormoops blainvillei Antillean ghost-faced bat Mormoops blainvillii 118852 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Mormoops HLmorBla1 GCA_004026545.1 NCBI MorMeg_v1_BIUU Scaffold 2019-01-16 Broad Institute 142682 156292 13560 542 1094 Mormoops_megalophylla__ghost-faced_bat__HLmorMeg1__GCA_985614085.1 Mormoops megalophylla ghost-faced bat 59460 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Mormoops HLmorMeg1 GCA_985614085.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-11-22 45062019 133489214 14357 386 453 Pteronotus_mesoamericanus__Mesoamerican_mustached_bat__HLpteMes1__GCA_021234165.1 Pteronotus mesoamericanus Mesoamerican mustached bat Pteronotus mesoamericanus 1884717 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus HLpteMes1 GCA_021234165.1 NCBI, https://www.biorxiv.org/content/10.1101/2020.09.09.290502v2 2021-12-09 31480947 31480947 14890 281 25 Pteronotus_parnellii__Parnells_mustached_bat__HLptePar2 Pteronotus parnellii Parnells mustached bat 59476 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus HLptePar2 Dryad https://doi.org/10.5061/dryad.0k6djh9z1 Dryad https://doi.org/10.5061/dryad.0k6djh9z1 2022-02-18 1927 77454 13222 1043 931 Pteronotus_mesoamericanus__Mesoamerican_Common_Mustached_Bat__HLpteMeso2__GCA_056363955.1 Pteronotus mesoamericanus Mesoamerican Common Mustached Bat Pteronotus parnellii mesoamericanus 1884717 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus HLpteMeso2 GCA_056363955.1 NCBI mPteMes1.pri Chromosome 2026-03-27 Bat1K Project 55023364 181924859 14933 252 11 Pteronotus_davyi__Davys_naked-backed_bat__HLpteDav1__GCA_058219175.1 Pteronotus davyi Davys naked-backed bat Pteronotus davyii 94956 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus HLpteDav1 GCA_058219175.1 NCBI, Huabin Zhao 2024-08-16 21078933 178115082 13363 1797 36 Pteronotus_parnellii_mexicanus__Parnells_mustached_bat__HLpteParMex3__GCA_036768555.1 Pteronotus parnellii mexicanus Parnells mustached bat Pteronotus mexicanus,Phyllodia parnellii 1884721 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mormoopidae; Pteronotus; Pteronotus parnellii HLpteParMex3 GCA_036768555.1 NCBI ASM3676855v1 Scaffold 2024-02-22 INSTITUTO POLITECNICO NACIONAL 3693 29736806 9903 3322 1971 Mystacina_tuberculata__New_Zealand_lesser_short-tailed_bat__HLmysTub2__GCA_985612315.1 Mystacina tuberculata New Zealand lesser short-tailed bat 94961 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Mystacinidae; Mystacina HLmysTub2 GCA_985612315.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-06-13 12452606 166916748 14690 447 59 Myzopoda_aurita__Madagascar_sucker-footed_bat__HLmyzAur1__GCA_985615965.1 Myzopoda aurita Madagascar sucker-footed bat 155038 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Myzopodidae; Myzopoda HLmyzAur1 GCA_985615965.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-11-22 59862867 203441127 14791 384 21 Natalus_tumidirostris__Trinidadian_funnel-eared_bat__HLnatTum1__GCA_985614685.1 Natalus tumidirostris Trinidadian funnel-eared bat 59487 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Natalidae; Natalus HLnatTum1 GCA_985614685.1 Bat1K 21 Families project; Morales et al. Nature 2026 2020-11-04 49876460 189753954 14935 245 16 Noctilio_leporinus__greater_bulldog_bat__HLnocLep1__GCA_004026585.1 Noctilio leporinus greater bulldog bat 94963 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Noctilionidae; Noctilio HLnocLep1 GCA_004026585.1 NCBI NocLep_v1_BIUU Scaffold 2019-01-16 Broad Institute 135651 191494 14095 444 657 Noctilio_leporinus__greater_bulldog_bat__HLnocLep2__GCA_985617315.1 Noctilio leporinus greater bulldog bat 94963 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Noctilionidae; Noctilio HLnocLep2 GCA_985617315.1 Bat1K 21 Families project; Morales et al. Nature 2026 2020-11-16 29813288 179444044 14840 338 18 Nycteris_thebaica__Egyptian_slit-faced_bat__HLnycThe1A__GCA_985607365.1 Nycteris thebaica Egyptian slit-faced bat 59467 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Nycteridae; Nycteris HLnycThe1A GCA_985607365.1 Bat1K 21 Families project; Morales et al. Nature 2026 2022-11-15 12637397 115797458 14819 356 21 Brachyphylla_cavernarum__Antillean_fruit-eating_bat__HLbraCav1A__GCA_987486965.1 Brachyphylla cavernarum Antillean fruit-eating bat 9421 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Brachyphyllinae; Brachyphylla HLbraCav1A GCA_987486965.1 NCBI, Bat1K 21 Families project 2023-10-30 74123662 170914627 14887 298 11 Carollia_perspicillata__Sebas_short-tailed_bat__HLcarPer2__GCA_056371365.1 Carollia perspicillata Sebas short-tailed bat 40233 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Carolliinae; Carollia HLcarPer2 GCA_056371365.1 Hillerlab 2020-09-20 31697900 240439855 14879 295 22 Carollia_perspicillata__Sebas_short-tailed_bat__HLcarPer3__GCA_004027735.1 Carollia perspicillata Sebas short-tailed bat 40233 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Carolliinae; Carollia HLcarPer3 GCA_004027735.1 NCBI CarPer_v1_BIUU Scaffold 2019-01-16 Broad Institute 10341 10739 9789 1988 3419 Carollia_sowelli__Sowells_short-tailed_bat__HLcarSowe1A__GCA_051307085.1 Carollia sowelli Sowells short-tailed bat 208969 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Carolliinae; Carollia HLcarSowe1A GCA_051307085.1 NCBI mCarSow1.hap1 Chromosome 2025-07-14 Bat1K Project 63517445 330360365 14887 294 15 Carollia_sowelli__Sowells_short-tailed_bat__HLcarSowe1B__GCA_051307135.1 Carollia sowelli Sowells short-tailed bat 208969 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Carolliinae; Carollia HLcarSowe1B GCA_051307135.1 NCBI mCarSow1.hap2 Chromosome 2025-07-14 Bat1K Project 96807652 320412339 14892 287 17 Rhinophylla_pumilio__dwarf_little_fruit_bat__HLrhiPum1A__GCA_985607415.1 Rhinophylla pumilio dwarf little fruit bat 138707 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Carolliinae; Rhinophylla HLrhiPum1A GCA_985607415.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-04-05 72040000 183839328 14849 332 15 Desmodus_rotundus__common_vampire_bat__HLdesRot15A Desmodus rotundus common vampire bat vampire bat,Phyllostoma rotundum 9430 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus HLdesRot15A TBG Hillerlab TBG Hillerlab 2023-05-25 9037853 161147830 14898 283 15 Desmodus_rotundus__common_vampire_bat__HLdesRot15B Desmodus rotundus common vampire bat vampire bat,Phyllostoma rotundum 9430 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus HLdesRot15B TBG Hillerlab TBG Hillerlab 2023-08-29 11272968 161066799 14374 286 536 Anoura_caudifer__tailed_tailless_bat__HLanoCau1__GCA_004027475.1 Anoura caudifer tailed tailless bat 27642 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Anoura HLanoCau1 GCA_004027475.1 NCBI AnoCau_v1_BIUU Scaffold 2019-01-16 Broad Institute 143417 185021 14025 485 686 Choeroniscus_minor__lesser_long-tailed_bat__HLchoMin1A__GCA_985607375.1 Choeroniscus minor lesser long-tailed bat Choeronycteris minor 249003 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Choeroniscus HLchoMin1A GCA_985607375.1 Bat1K 21 Families project; Morales et al. Nature 2026 2023-11-01 25879020 316056839 14819 361 16 Glossophaga_mutica__Merriams_long-tongued_bat__HLgloMut1A__GCA_039655065.1 Glossophaga mutica Merriams long-tongued bat 2994998 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Glossophaga HLgloMut1A GCA_039655065.1 NCBI mGloMut1.hap1 Chromosome 2024-05-17 Bat1K Project 77027013 169732090 14880 299 17 Glossophaga_mutica__Merriams_long-tongued_bat__HLgloMut1B__GCA_039656995.1 Glossophaga mutica Merriams long-tongued bat 2994998 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Glossophaga HLgloMut1B GCA_039656995.1 NCBI mGloMut1.hap2 Chromosome 2024-05-17 Bat1K Project 72101253 169568502 14877 307 12 Glossophaga_soricina__Pallass_long-tongued_bat__HLgloSor2 Glossophaga soricina Pallass long-tongued bat 27638 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Glossophaga HLgloSor2 Hiller lab, Senckenberg Hiller lab, Senckenberg 2020-09-22 27326300 169263504 14865 320 11 Leptonycteris_yerbabuenae__Lesser_long-nosed_bat__HLlepYer1 Leptonycteris yerbabuenae Lesser long-nosed bat Leptonycteris curasoae yerbabuenae 700936 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Leptonycteris HLlepYer1 GIGADB GIGADB 2020-07-05 37711 14735151 14164 654 378 Leptonycteris_yerbabuenae__Lesser_long-nosed_bat__HLlepYer2A__GCA_987541675.1 Leptonycteris yerbabuenae Lesser long-nosed bat Leptonycteris curasoae yerbabuenae 700936 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Glossophaginae; Leptonycteris HLlepYer2A GCA_987541675.1 Bat1K 21 Families project; Morales et al. Nature 2026 2022-07-28 46270874 166812279 14866 309 21 Lionycteris_spurrelli__chestnut_long-tongued_bat__HLlioSpu1A__GCA_985607405.1 Lionycteris spurrelli chestnut long-tongued bat 148090 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Lonchophyllinae; Lionycteris HLlioSpu1A GCA_985607405.1 Bat1K 21 Families project; Morales et al. Nature 2026 2023-11-01 87943974 183332052 14876 307 13 Erophylla_bombifrons__brown_flower_bat__HLeroBom1A__GCA_985607435.1 Erophylla bombifrons brown flower bat Phyllonycteris bombifrons 290569 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllonycterinae; Erophylla HLeroBom1A GCA_985607435.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-01-19 84416046 169080660 14896 281 19 Gardnerycteris_keenani__Keenans_Hairy-nosed_Bat__HLgarKeen1A__GCA_050655435.1 Gardnerycteris keenani Keenans Hairy-nosed Bat Mimon crenulatum keenani 2358194 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Gardnerycteris HLgarKeen1A GCA_050655435.1 NCBI mGarKee1.hap1 Chromosome 2025-06-02 Bat1K Project 58415411 171193413 14815 361 20 Gardnerycteris_keenani__Keenans_Hairy-nosed_Bat__HLgarKeen1B__GCA_050655445.1 Gardnerycteris keenani Keenans Hairy-nosed Bat Mimon crenulatum keenani 2358194 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Gardnerycteris HLgarKeen1B GCA_050655445.1 NCBI mGarKee1.hap2 Chromosome 2025-06-02 Bat1K Project 85586699 178810477 14324 332 540 Glyphonycteris_daviesi__Daviess_big-eared_bat__HLglyDav1A__GCA_985607345.1 Glyphonycteris daviesi Daviess big-eared bat Barticonycteris daviesi,Micronycteris daviesi 148064 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Glyphonycteris HLglyDav1A GCA_985607345.1 Bat1K 21 Families project; Morales et al. Nature 2026 2023-09-21 77858990 159033365 14886 300 10 Lonchorhina_inusitata__Uncommon_sword-nosed_bat__HLlonInu1A__GCA_985607295.1 Lonchorhina inusitata Uncommon sword-nosed bat 409030 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Lonchorhina HLlonInu1A GCA_985607295.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-01-05 39339052 164421262 14871 308 17 Lophostoma_evote__Davis_round-eared_bat__HLlopEvot1A__GCA_051307075.1 Lophostoma evote Davis round-eared bat Lophostoma evotis,Tonatia evotis 3370176 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Lophostoma HLlopEvot1A GCA_051307075.1 NCBI mLopEvo1.hap1 Chromosome 2025-07-14 Bat1K Project 53008647 175755209 14791 376 29 Lophostoma_evote__Davis_round-eared_bat__HLlopEvot1B__GCA_051307065.1 Lophostoma evote Davis round-eared bat Tonatia evotis,Lophostoma evotis 3370176 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Lophostoma HLlopEvot1B GCA_051307065.1 NCBI mLopEvo1.hap2 Chromosome 2025-07-14 Bat1K Project 60976938 172574066 14154 493 549 Macrophyllum_macrophyllum__long-legged_bat__HLmacMac1A__GCA_985616795.1 Macrophyllum macrophyllum long-legged bat Phyllostoma macrophyllum 148062 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Macrophyllum HLmacMac1A GCA_985616795.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-02-08 64451728 165616158 14881 300 15 Macrotus_californicus__California_big-eared_bat__HLmacCal1__GCA_007922815.1 Macrotus californicus California big-eared bat California leaf-nosed bat 9419 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Macrotus HLmacCal1 GCA_007922815.1 NCBI MacCal_v1_BIUU Scaffold 2019-08-08 Broad Institute 16386 16925 12603 953 1640 Macrotus_waterhousii__Waterhouses_leaf-nosed_bat__HLmacWat1A__GCA_985607315.1 Macrotus waterhousii Waterhouses leaf-nosed bat Macrotus waterhousi 124750 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Macrotus HLmacWat1A GCA_985607315.1 Bat1K 21 Families project; Morales et al. Nature 2026 2022-11-28 85702778 106808056 14908 269 19 Micronycteris_hirsuta__hairy_big-eared_bat__HLmicHir1__GCA_004026765.1 Micronycteris hirsuta hairy big-eared bat 148065 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Micronycteris HLmicHir1 GCA_004026765.1 NCBI MicHir_v1_BIUU Scaffold 2019-01-16 Broad Institute 62961 68868 12549 594 2053 Micronycteris_microtis__Common_big-eared_bat__HLmicMicr1A__GCA_051107205.1 Micronycteris microtis Common big-eared bat 249008 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Micronycteris HLmicMicr1A GCA_051107205.1 NCBI mMicMic1.hap1 Chromosome 2025-06-26 Bat1K Project 59308170 134000379 14866 302 28 Micronycteris_microtis__Common_big-eared_bat__HLmicMicr1B__GCA_051107335.1 Micronycteris microtis Common big-eared bat 249008 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Micronycteris HLmicMicr1B GCA_051107335.1 NCBI mMicMic1.hap2 Chromosome 2025-06-26 Bat1K Project 58593296 147818333 14353 295 548 Phyllostomus_discolor__pale_spear-nosed_bat__HLphyDis3__GCA_014049915.1 Phyllostomus discolor pale spear-nosed bat 89673 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus HLphyDis3 GCA_014049915.1 NCBI, Bat1K 2019-04-28 15176516 171075004 14858 318 20 Phyllostomus_discolor__Pale_spear-nosed_bat__HLphyDisc4__GCF_004126475.2 Phyllostomus discolor Pale spear-nosed bat 89673 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus HLphyDisc4 GCF_004126475.2 NCBI mPhyDis1.pri.v3 Chromosome 2020-05-12 Vertebrate Genomes Project 6892556 171742863 14141 1013 42 Phyllostomus_hastatus__Greater_spear-nosed_bat__HLphyHast2__GCF_019186645.2 Phyllostomus hastatus Greater spear-nosed bat Vespertilio hastatus 9423 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus HLphyHast2 GCF_019186645.2 NCBI TTU_PhHast_1.1 Scaffold 2021-07-09 Texas Tech University 31525663 39158280 14846 337 13 Phyllostomus_hastatus__greater_spear-nosed_bat__HLphyHas1__GCA_985614985.1 Phyllostomus hastatus greater spear-nosed bat 9423 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus HLphyHas1 GCA_985614985.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-04-16 48064458 169628750 14823 356 17 Tonatia_bakeri__stripe-headed_round-eared_bat__HLtonSau1__GCA_004024845.1 Tonatia bakeri stripe-headed round-eared bat previously called Tonatia saurophila 171122 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Tonatia HLtonSau1 GCA_004024845.1 NCBI TonSau_v1_BIUU Scaffold 2019-01-15 Broad Institute 141649 165561 14356 446 394 Trachops_cirrhosus__fringe-lipped_bat__HLtraCir2__GCA_028533065.1 Trachops cirrhosus fringe-lipped bat 148073 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Trachops HLtraCir2 GCA_028533065.1 DNA Zoo Consortium 2022-07-06 59419 124458213 13578 688 930 Trachops_cirrhosus__Fringe-lipped_bat__HLtraCir4A__GCA_985607395.1 Trachops cirrhosus Fringe-lipped bat Vampyrus cirrhosus 148073 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Trachops HLtraCir4A GCA_985607395.1 TBG 2024-07-05 61772694 170141541 14932 260 4 Trinycteris_nicefori__Niceforos_big-eared_bat__HLtriNic1A__GCA_985607355.1 Trinycteris nicefori Niceforos big-eared bat Micronycteris nicefori 148068 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Trinycteris HLtriNic1A GCA_985607355.1 Bat1K 21 Families project; Morales et al. Nature 2026 2023-10-31 102273008 160399904 14891 296 9 Vampyrum_spectrum__Bats__HLvamSpec1__GCA_051314355.1 Vampyrum spectrum Bats Vespertilio spectrum 148074 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Vampyrum HLvamSpec1 GCA_051314355.1 NCBI WHU_Vspe_v1 Scaffold 2025-07-14 Wuhan University 156999 1106428 14115 660 421 Artibeus_jamaicensis__Jamaican_fruit-eating_bat__HLartJam2__GCA_014825515.1 Artibeus jamaicensis Jamaican fruit-eating bat 9417 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartJam2 GCA_014825515.1 NCBI WHU_Ajam_v2 Scaffold 2020-09-30 College of Life Sciences at Wuhan University 374929 2589479 14416 557 223 Artibeus_jamaicensis__Jamaican_fruit-eating_bat__HLartJam3__GCA_021234435.1 Artibeus jamaicensis Jamaican fruit-eating bat 9417 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartJam3 GCA_021234435.1 NCBI, Diana Moreno 2021-09-10 22092642 22092642 14817 357 22 Artibeus_lituratus__Great_fruit-eating_bat__HLartLit1A__GCA_038363095.2 Artibeus lituratus Great fruit-eating bat 27634 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartLit1A GCA_038363095.2 NCBI mArtLit.hap1 Chromosome 2024-05-21 Bat1K Project 65515378 160301290 14845 336 15 Artibeus_lituratus__Great_fruit-eating_bat__HLartLit1B__GCA_038363175.2 Artibeus lituratus Great fruit-eating bat 27634 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartLit1B GCA_038363175.2 NCBI mArtLit1.hap2 Chromosome 2024-05-17 Bat1K Project 60386740 164085409 14152 383 661 Artibeus_lituratus__Great_fruit-eating_bat__HLartLitu2A__GCA_038363095.4 Artibeus lituratus Great fruit-eating bat 27634 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartLitu2A GCA_038363095.4 NCBI mArtLit1.hap1 Chromosome 2025-05-01 Bat1K Project 65515378 160301290 14844 337 15 Artibeus_lituratus__Great_fruit-eating_bat__HLartLitu2B__GCA_038363175.3 Artibeus lituratus Great fruit-eating bat 27634 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartLitu2B GCA_038363175.3 NCBI mArtLit1.hap2 Chromosome 2025-04-29 Bat1K Project 60386740 164085409 14152 388 656 Artibeus_intermedius__common_fruit-eating_bat__HLartInt1A__GCA_038363145.1 Artibeus intermedius common fruit-eating bat Artibeus lituratus intermedius 51014 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartInt1A GCA_038363145.1 NCBI mArtInt1.hap1 Chromosome 2024-04-22 Bat1K Project 60026580 160430197 14779 402 15 Artibeus_intermedius__common_fruit-eating_bat__HLartInt1B__GCA_038363225.1 Artibeus intermedius common fruit-eating bat Artibeus lituratus intermedius 51014 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Artibeus HLartInt1B GCA_038363225.1 NCBI mArtInt1.hap2 Chromosome 2024-04-22 Bat1K Project 74638333 167574344 14121 408 667 Centurio_senex__Wrinkle-faced_bat__HLcenSen1A__GCA_058972505.1 Centurio senex Wrinkle-faced bat 27644 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Centurio HLcenSen1A GCA_058972505.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-08-21 44369972 152395564 14810 369 17 Dermanura_phaeotis__Dwarf_fruit-eating_bat__HLderPhae1A__GCA_051107565.1 Dermanura phaeotis Dwarf fruit-eating bat Artibeus phaeotis,pygmy fruit-eating bat 40229 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Dermanura HLderPhae1A GCA_051107565.1 NCBI mDerPha1.hap1 Chromosome 2025-06-26 Bat1K Project 57954836 154617452 14829 349 18 Dermanura_phaeotis__Dwarf_fruit-eating_bat__HLderPhae1B__GCA_051107595.1 Dermanura phaeotis Dwarf fruit-eating bat pygmy fruit-eating bat,Artibeus phaeotis 40229 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Dermanura HLderPhae1B GCA_051107595.1 NCBI mDerPha1.hap2 Chromosome 2025-06-26 Bat1K Project 101513163 156917333 14130 385 681 Ectophylla_alba__Honduran_white_bat__HLectAlb1A__GCA_985607515.1 Ectophylla alba Honduran white bat 148036 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Ectophylla HLectAlb1A GCA_985607515.1 Bat1K 21 Families project; Morales et al. Nature 2026 2022-12-21 35032423 151691930 14781 398 17 Platyrrhinus_helleri__Hellers_broad-nosed_bat__HLplaHell1A__GCA_051107505.1 Platyrrhinus helleri Hellers broad-nosed bat Vampyrops helleri 27658 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Platyrrhinus HLplaHell1A GCA_051107505.1 NCBI mPlaHel1.hap1 Chromosome 2025-06-26 Bat1K Project 49393690 159727393 14839 343 14 Platyrrhinus_helleri__Hellers_broad-nosed_bat__HLplaHell1B__GCA_051107545.1 Platyrrhinus helleri Hellers broad-nosed bat Vampyrops helleri 27658 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Platyrrhinus HLplaHell1B GCA_051107545.1 NCBI mPlaHel1.hap2 Chromosome 2025-06-26 Bat1K Project 47571643 157586635 14140 377 679 Platyrrhinus_guianensis__Guianan_broad-nosed_bat__HLplaGui1A__GCA_985607425.1 Platyrrhinus guianensis Guianan broad-nosed bat 1505192 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Platyrrhinus HLplaGui1A GCA_985607425.1 Bat1K 21 Families project; Morales et al. Nature 2026 2023-11-01 59399000 153352154 14858 323 15 Sturnira_hondurensis__Honduras_yellow-shouldered_bat__HLstuHon1__GCA_014824575.1 Sturnira hondurensis Honduras yellow-shouldered bat 192404 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira HLstuHon1 GCA_014824575.1 NCBI WHU_Shon_v2 Scaffold 2020-09-30 College of Life Sciences at Wuhan University 2136421 10164808 14214 463 519 Sturnira_parvidens__Northern_Yellow-shouldered_Bat__HLstuParv1A__GCA_054855685.1 Sturnira parvidens Northern Yellow-shouldered Bat Sturnira lilium parvidens 196700 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira HLstuParv1A GCA_054855685.1 NCBI mStuPar1.hap1 Chromosome 2026-01-30 Bat1K Project 48411880 149586925 14852 327 17 Sturnira_parvidens__Northern_Yellow-shouldered_Bat__HLstuParv1B__GCA_054855695.1 Sturnira parvidens Northern Yellow-shouldered Bat Sturnira lilium parvidens 196700 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira HLstuParv1B GCA_054855695.1 NCBI mStuPar1.hap2 Chromosome 2026-01-30 Bat1K Project 50527669 157872161 14105 378 713 Uroderma_convexum__Pacific_Tent-making_Bat__HLuroBil1__GCA_985613525.1 Uroderma convexum Pacific Tent-making Bat 2683985 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Uroderma HLuroBil1 GCA_985613525.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-11-30 35087339 134648713 14697 461 38 Vampyressa_thyone__northern_little_yellow-eared_bat__HLvamThy1A__GCA_985607325.1 Vampyressa thyone northern little yellow-eared bat 362826 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Vampyressa HLvamThy1A GCA_985607325.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-04-11 50268000 171624621 14860 322 14 Thyroptera_tricolor__Spixs_disk-winged_bat__HLthyTri1__GCA_985616965.1 Thyroptera tricolor Spixs disk-winged bat 124759 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Thyropteridae; Thyroptera HLthyTri1 GCA_985616965.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-04-16 81080865 174789141 14690 439 67 Antrozous_pallidus__pallid_bat__HLantPal2__GCA_027563665.1 Antrozous pallidus pallid bat 9440 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Antrozous HLantPal2 GCA_027563665.1 NCBI, Bat1K 2021-09-10 41887785 114648712 14446 711 39 Barbastella_leucomelas__Eastern_barbastelle__HLbarLeu1 Barbastella leucomelas Eastern barbastelle Vespertilio leucomelas 187009 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Barbastella HLbarLeu1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-25 48556 11789137 12377 959 1860 Cnephaeus_nilssonii__Northern_bat__HLeptNil3__GCA_951640355.1 Cnephaeus nilssonii Northern bat Eptesicus nilssoni,Vespertilio nilssonii,Eptesicus nilsonii 59451 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Cnephaeus HLeptNil3 GCA_951640355.1 NCBI 2024-07-03 2474537 98018206 14757 356 83 Corynorhinus_rafinesquii__Rafinesques_big-eared_bat__HLcorRaf1 Corynorhinus rafinesquii Rafinesques big-eared bat Plecotus rafinesquii 27674 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Corynorhinus HLcorRaf1 DNA Zoo Consortium DNA Zoo Consortium 2022-02-28 35099 144810274 12976 745 1475 Corynorhinus_townsendii__Townsends_big-eared_bat__HLcorTow1A__GCA_026230055.1 Corynorhinus townsendii Townsends big-eared bat Plecotus townsendii 124745 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Corynorhinus HLcorTow1A GCA_026230055.1 NCBI mCorTow1.0.hap1 Scaffold 2022-11-18 UCLA 23382908 174690156 14802 371 23 Corynorhinus_townsendii__Townsends_big-eared_bat__HLcorTow1B__GCA_026230045.1 Corynorhinus townsendii Townsends big-eared bat Plecotus townsendii 124745 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Corynorhinus HLcorTow1B GCA_026230045.1 NCBI mCorTow1.0.hap2 Scaffold 2022-11-18 UCLA 22150609 177756282 14307 374 515 Corynorhinus_townsendii__Townsends_big-eared_bat__HLcorTown2A__GCA_026230055.2 Corynorhinus townsendii Townsends big-eared bat Plecotus townsendii 124745 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Corynorhinus HLcorTown2A GCA_026230055.2 NCBI mCorTow1.1.hap1 Chromosome 2025-12-17 UCLA 23451255 174690256 14842 330 24 Corynorhinus_mexicanus__Mexican_big-eared_bat__HLcorMex1__GCA_985613265.1 Corynorhinus mexicanus Mexican big-eared bat Plecotus mexicanus 712049 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Corynorhinus HLcorMex1 GCA_985613265.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-02-09 6443000 163033761 14841 303 52 Eptesicus_fuscus__big_brown_bat__HLeptFus3__GCF_027574615.1 Eptesicus fuscus big brown bat Vespertilio fuscus 29078 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus HLeptFus3 GCF_027574615.1 NCBI DD_ASM_mEF_20220401 Chromosome 2023-01-09 Bat1K 49033427 102817582 14919 267 10 Harpiocephalus_harpia__hairy-winged_bat__HLharHar1 Harpiocephalus harpia hairy-winged bat Vespertilio harpia 124749 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Harpiocephalus HLharHar1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 36067 8501880 11632 1233 2331 Ia_io__Great_evening_bat__HLiaxIox1__GCA_025583905.1 Ia io Great evening bat 360967 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Ia HLiaxIox1 GCA_025583905.1 NCBI NENU_Iio_1.0 Scaffold 2022-10-05 Northeast Normal University 62415887 105833403 13590 1592 14 Ia_io__Great_evening_bat__HLiaxIox2A__GCA_054824925.1 Ia io Great evening bat 360967 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Ia HLiaxIox2A GCA_054824925.1 NCBI mIaxIox2.hap1 Chromosome 2026-01-29 Bat1K Project 22958249 100437821 14686 448 62 Kerivoula_hardwickii__Hardwickes_woolly_bat__HLkerHar1 Kerivoula hardwickii Hardwickes woolly bat Vespertilio hardwickii 155035 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Kerivoula HLkerHar1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-25 50497 2880418 11443 1396 2357 Lasiurus_cinereus__hoary_bat__HLaeoCin1__GCA_011751065.1 Lasiurus cinereus hoary bat North American hoary bat,Lasiurus cinereus 257879 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Lasiurus HLaeoCin1 GCA_011751065.1 NCBI L.cinereus_Cryan_1219_p1.0 Scaffold 2020-03-25 United States Geological Survey 120638 35075546 13648 813 735 Lasiurus_borealis__red_bat__HLlasBor1__GCA_004026805.1 Lasiurus borealis red bat 258930 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Lasiurus HLlasBor1 GCA_004026805.1 NCBI LasBor_v1_BIUU Scaffold 2019-01-16 Broad Institute 35165 38543 10549 1719 2928 Lasiurus_ega__Southern_yellow_bat__HLlasEga1A__GCA_058971415.1 Lasiurus ega Southern yellow bat Dasypterus ega,Nycticejus ega 258928 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Lasiurus HLlasEga1A GCA_058971415.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-09-01 48423497 134088245 14647 494 55 Murina_feae__Little_tube-nosed_bat__HLmurAurFea1__GCA_004026665.1 Murina feae Little tube-nosed bat Murina aurata feae 1453894 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Murina HLmurAurFea1 GCA_004026665.1 NCBI MurFea_v1_BIUU Scaffold 2019-01-16 Broad Institute 23400 26051 12647 839 1710 Murina_hilgendorfi__Hilgendorfs_tube-nosed_bat__HLmurHil1 Murina hilgendorfi Hilgendorfs tube-nosed bat Harpiocephalus hilgendorfi 685731 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Murina HLmurHil1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-25 62308 100625229 13275 716 1205 Myotis_daubentonii__Daubentons_bat__HLmyoDau2__GCF_963259705.1 Myotis daubentonii Daubentons bat Myotis daubentoni,Wasserfledermaus,Vespertilio daubentonii 98922 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoDau2 GCF_963259705.1 NCBI mMyoDau2.1 Chromosome 2023-08-20 WELLCOME SANGER INSTITUTE 3062752 102234773 14841 310 45 Myotis_daubentonii__Daubentons_bat__HLmyoDaub3A__GCA_963259705.2 Myotis daubentonii Daubentons bat Wasserfledermaus,Myotis daubentoni,Vespertilio daubentonii 98922 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoDaub3A GCA_963259705.2 NCBI mMyoDau2.hap1.2 Chromosome 2025-04-09 WELLCOME SANGER INSTITUTE 28718153 101535203 14908 270 18 Myotis_emarginatus__Geoffroys_bat__HLmyoEma1A__GCA_965115925.1 Myotis emarginatus Geoffroys bat Vespertilio emarginatus 109480 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoEma1A GCA_965115925.1 NCBI mMyoEma1.hap1.1 Chromosome 2025-01-24 WELLCOME SANGER INSTITUTE 2127843 96276321 14698 392 106 Myotis_emarginatus__Geoffroys_bat__HLmyoEma1B__GCA_965115945.1 Myotis emarginatus Geoffroys bat Vespertilio emarginatus 109480 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoEma1B GCA_965115945.1 NCBI mMyoEma1.hap2.1 Scaffold 2025-01-24 WELLCOME SANGER INSTITUTE 2102766 96450164 14192 662 342 Myotis_emarginatus__Geoffroys_bat__HLmyoEmar2A__GCA_965115925.2 Myotis emarginatus Geoffroys bat Vespertilio emarginatus 109480 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoEmar2A GCA_965115925.2 NCBI mMyoEma1.hap1.2 Chromosome 2025-04-14 WELLCOME SANGER INSTITUTE 48680186 99609134 14814 347 35 Myotis_findleyi__Findleys_myotis__HLmyoFin1__GCA_038630795.1 Myotis findleyi Findleys myotis 3085897 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoFin1 GCA_038630795.1 NCBI ASM3863079v1 Scaffold 2024-04-29 INSTITUTO POLITECNICO NACIONAL 60830 92497854 13268 849 1079 Myotis_lucifugus__little_brown_bat__HLmyoLuc1 Myotis lucifugus little brown bat 59463 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoLuc1 DNA Zoo Consortium DNA Zoo Consortium 2020-07-12 61531 95464383 11072 2836 1288 Myotis_myotis__greater_mouse-eared_bat__HLmyoMyo6__GCA_014108235.1 Myotis myotis greater mouse-eared bat 51298 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoMyo6 GCA_014108235.1 NCBI, Bat1K 2019-04-16 11795106 94448911 14837 323 36 Myotis_mystacinus__Whiskered_bat__HLmyoMys2A__GCA_964094495.2 Myotis mystacinus Whiskered bat Vespertilio mystacinus 109479 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoMys2A GCA_964094495.2 NCBI mMyoMys1.hap1.1 Chromosome 2024-06-12 WELLCOME SANGER INSTITUTE 2201046 99827109 14856 269 71 Myotis_mystacinus__Whiskered_bat__HLmyoMys2B__GCA_964195625.1 Myotis mystacinus Whiskered bat Vespertilio mystacinus 109479 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoMys2B GCA_964195625.1 NCBI mMyoMys1.hap2.1 Chromosome 2024-06-30 WELLCOME SANGER INSTITUTE 2254345 98765083 14344 286 566 Myotis_mystacinus__Whiskered_bat__HLmyoMyst3A__GCA_964094495.3 Myotis mystacinus Whiskered bat Vespertilio mystacinus 109479 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoMyst3A GCA_964094495.3 NCBI mMyoMys1.hap1.2 Chromosome 2025-10-26 WELLCOME SANGER INSTITUTE 28343623 100246715 14919 249 28 Myotis_nattereri__Natterers_bat__HLmyoNat1A__GCA_964212035.1 Myotis nattereri Natterers bat Myotis nattererii,Vespertilio nattereri,Myotis naterreri 109481 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoNat1A GCA_964212035.1 NCBI mMyoNat1.hap1.1 Chromosome 2024-08-02 WELLCOME SANGER INSTITUTE 2065327 101144875 14842 280 74 Myotis_nattereri__Natterers_bat__HLmyoNat1B__GCA_964212025.1 Myotis nattereri Natterers bat Vespertilio nattereri,Myotis nattererii,Myotis naterreri 109481 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoNat1B GCA_964212025.1 NCBI mMyoNat1.hap2.1 Scaffold 2024-08-02 WELLCOME SANGER INSTITUTE 2100158 97795217 14305 308 583 Myotis_nattereri__Natterers_bat__HLmyoNatt2A__GCA_964212035.2 Myotis nattereri Natterers bat Myotis nattererii,Myotis naterreri,Vespertilio nattereri 109481 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoNatt2A GCA_964212035.2 NCBI mMyoNat1.hap1.2 Chromosome 2025-03-28 WELLCOME SANGER INSTITUTE 44226636 99996439 14931 252 13 Myotis_nattereri__Natterers_bat__HLmyoNatt2B__GCA_964212025.2 Myotis nattereri Natterers bat Vespertilio nattereri,Myotis nattererii,Myotis naterreri 109481 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoNatt2B GCA_964212025.2 NCBI mMyoNat1.hap2.2 Scaffold 2025-03-28 WELLCOME SANGER INSTITUTE 47439000 99187516 14362 298 536 Myotis_nesopolus__Cucacao_Myotis__HLmyoNeso1A__GCA_054855985.1 Myotis nesopolus Cucacao Myotis 1163727 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoNeso1A GCA_054855985.1 NCBI mMyoNes1.hap1 Chromosome 2026-01-30 Bat1K Project 49124421 105520506 14801 366 29 Myotis_planiceps__flat-headed_Myotis__HLmyoPla1__GCA_036250175.1 Myotis planiceps flat-headed Myotis 1209081 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoPla1 GCA_036250175.1 NCBI ASM3625017v1 Scaffold 2024-01-29 INSTITUTO POLITECNICO NACIONAL 13500 83203680 6350 3065 5781 Myotis_pilosus__Ricketts_big-footed_Myotis__HLmyoRic2__GCA_036010255.1 Myotis pilosus Ricketts big-footed Myotis Myotis pilosus 203696 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoRic2 GCA_036010255.1 NCBI ASM3601025v1 Contig 2024-01-23 Chinese Academy of Sciences 79957542 79957542 14934 250 12 Myotis_septentrionalis__Northern_long-eared_myotis__HLmyoSep1 Myotis septentrionalis Northern long-eared myotis 258941 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoSep1 DNA Zoo Consortium DNA Zoo Consortium 2020-06-20 205441 96689946 13494 1263 439 Myotis_vivesi__fish-eating_bat__HLmyoViv1__GCA_035771395.1 Myotis vivesi fish-eating bat 233766 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoViv1 GCA_035771395.1 NCBI ASM3577139v1 Scaffold 2024-01-17 INSTITUTO POLITECNICO NACIONAL 68740 91830945 13983 475 738 Myotis_yumanensis__Yuma_myotis__HLmyoYum1A__GCA_028536395.1 Myotis yumanensis Yuma myotis Vespertilio yumanensis 159337 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoYum1A GCA_028536395.1 NCBI mMyoYum1.0.hap2 Scaffold 2023-02-07 UCLA 26795370 94205551 14656 519 21 Myotis_yumanensis__Yuma_myotis__HLmyoYum1B__GCA_028538775.1 Myotis yumanensis Yuma myotis Vespertilio yumanensis 159337 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoYum1B GCA_028538775.1 NCBI mMyoYum1.0.hap1 Scaffold 2023-02-10 UCLA 28025655 99144700 14131 552 513 Myotis_brandtii__Brandts_myotis_bat__myoBra1__GCF_000412655.1 Myotis brandtii Brandts myotis bat 109478 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis myoBra1 GCF_000412655.1 NCBI ASM41265v1 Scaffold 2013-06-28 BGI 23289 3225832 12083 1649 1464 Myotis_davidii__Davids_myotis_bat__myoDav1__GCF_000327345.1 Myotis davidii Davids myotis bat 225400 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis myoDav1 GCF_000327345.1 NCBI ASM32734v1 Scaffold 2012-12-20 BGI 15182 3454484 11186 2210 1800 Myotis_chinensis__large_myotis__HLmyoChi1 Myotis chinensis large myotis Vespertilio chinensis 225399 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoChi1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 31755 91380839 11749 1095 2352 Myotis_tricolor__Cape_hairy_bat__HLmyoTric2A__GCA_054824995.1 Myotis tricolor Cape hairy bat Vespertilio tricolor 233765 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoTric2A GCA_054824995.1 NCBI mMyoTri1.hap1 Chromosome 2026-01-29 Bat1K Project 59717690 101392957 14885 280 31 Myotis_nigricans__black_myotis__HLmyoNig1 Myotis nigricans black myotis 153286 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoNig1 Bat1K Bat1K 2021-09-10 59753591 109149422 14804 374 18 Myotis_pilosus__Ricketts_big-footed_Myotis__HLmyoPil1 Myotis pilosus Ricketts big-footed Myotis Myotis ricketti 203696 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoPil1 JBQVXG000000000 provided by Huabin Zhao; https://sciety.org/articles/activity/10.21203/rs.3.rs-7561642/v1 2024-04-15 41290618 107200660 14453 732 11 Myotis_auriculus__Southwestern_myotis__HLmyoAui1__GCA_056320785.1 Myotis auriculus Southwestern myotis Myotis evotis auriculus 321263 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoAui1 GCA_056320785.1 Manny and Elise for 21Fam 2024-08-24 80406180 99473469 14935 247 14 Myotis_californicus__California_Myotis__HLmyoCal2__GCA_056320955.1 Myotis californicus California Myotis Vespertilio californicus 257882 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoCal2 GCA_056320955.1 Manny and Elise for 21Fam 2024-08-21 94581416 101286765 14941 237 18 Myotis_evotis__long-eared_Myotis__HLmyoEvo1__GCA_056320405.1 Myotis evotis long-eared Myotis Vespertilio evotis 257883 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoEvo1 GCA_056320405.1 Manny and Elise for 21Fam 2024-09-10 100887357 100887357 14938 246 12 Myotis_occultus__Arizona_Myotis__HLmyoOcc1__GCA_056320795.1 Myotis occultus Arizona Myotis 2497118 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoOcc1 GCA_056320795.1 Manny and Elise for 21Fam 2024-08-24 88523079 98960009 14928 252 16 Myotis_pilosatibialis__Northern_hairy-legged_myotis__HLmyoPilo1A__GCA_057888715.1 Myotis pilosatibialis Northern hairy-legged myotis Myotis keaysi pilosotibialis 2940081 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoPilo1A GCA_057888715.1 NCBI mMyoPil1.hap1 Chromosome 2026-06-03 Bat1K Project 59709451 111979193 14868 306 22 Myotis_sodalis__Indiana_bat__HLmyoSoda1A__GCA_057945255.1 Myotis sodalis Indiana bat 385036 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoSoda1A GCA_057945255.1 NCBI mMyoSod1.hap1 Chromosome 2026-06-04 Vertebrate Genomes Project 55522871 101681551 14916 264 16 Myotis_thysanodes__Fringed_myotis__HLmyoThy2__GCA_056320715.1 Myotis thysanodes Fringed myotis 153287 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoThy2 GCA_056320715.1 Manny and Elise for 21Fam 2024-08-24 94109772 101229579 14921 257 18 Myotis_velifer__Cave_myotis___HLmyoVel1__GCA_056320415.1 Myotis velifer Cave myotis cave myotis,Vespertilio velifer 9435 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoVel1 GCA_056320415.1 Manny and Elise for 21Fam 2024-08-25 92311868 98831194 14845 345 6 Myotis_volans__Long-legged_myotis__HLmyoVol2__GCA_056320705.1 Myotis volans Long-legged myotis Vespertilio volans 159335 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoVol2 GCA_056320705.1 Manny and Elise for 21Fam 2024-08-20 95393848 100618793 14930 252 14 Myotis_lucifugus__little_brown_bat__HLmyoLuc2__GCA_048340685.1 Myotis lucifugus little brown bat Vespertilio lucifugus 59463 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoLuc2 GCA_048340685.1 Manny and Elise for 21Fam 2024-08-26 89327978 98951147 14929 255 12 Myotis_vivesi__fish-eating_bat__HLmyoViv2__GCA_985617425.1 Myotis vivesi fish-eating bat 233766 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis HLmyoViv2 GCA_985617425.1 TBG 2024-02-09 11392062 99964322 14769 387 40 Neoeptesicus_chiriquinus__Chiriquinan_serotine__HLneoChir1A__GCA_054100705.1 Neoeptesicus chiriquinus Chiriquinan serotine Eptesicus chiriquinus 3371121 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Neoeptesicus HLneoChir1A GCA_054100705.1 NCBI mEptChi1.hap1 Chromosome 2025-12-18 Bat1K Project 43086391 104867932 14776 372 48 Neoeptesicus_chiriquinus__Chiriquinan_serotine__HLneoChir1B__GCA_054099605.1 Neoeptesicus chiriquinus Chiriquinan serotine Eptesicus chiriquinus 3371121 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Neoeptesicus HLneoChir1B GCA_054099605.1 NCBI mEptChi1.hap2 Chromosome 2025-12-18 Bat1K Project 51935836 102867081 14212 419 565 Neoeptesicus_furinalis__Argentine_brown_bat__HLneoFuri1A__GCA_054644455.1 Neoeptesicus furinalis Argentine brown bat Vespertilio furinalis,Eptesicus furinalis 3371123 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Neoeptesicus HLneoFuri1A GCA_054644455.1 NCBI mEptFur1.hap1 Chromosome 2026-01-22 Bat1K Project 55411905 103997655 14876 297 23 Nyctalus_aviator__birdlike_noctule__HLnycAvi1__GCA_036971965.1 Nyctalus aviator birdlike noctule 187010 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Nyctalus HLnycAvi1 GCA_036971965.1 NCBI NENU_Navi_1.0 Chromosome 2024-03-06 Northeast Normal University 61249120 101856247 14770 368 58 Nyctalus_leisleri__Lesser_noctule__HLnycLei1A__GCA_964264875.1 Nyctalus leisleri Lesser noctule Vespertilio Leisleri 59465 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Nyctalus HLnycLei1A GCA_964264875.1 NCBI mNycLei1.hap1.1 Chromosome 2024-09-21 WELLCOME SANGER INSTITUTE 1871731 90881000 14650 418 128 Nyctalus_leisleri__Lesser_noctule__HLnycLei1B__GCA_964264895.1 Nyctalus leisleri Lesser noctule Vespertilio Leisleri 59465 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Nyctalus HLnycLei1B GCA_964264895.1 NCBI mNycLei1.hap2.1 Scaffold 2024-09-21 WELLCOME SANGER INSTITUTE 1846178 87604689 14134 449 613 Nyctalus_leisleri__Lesser_noctule__HLnycLeis2A__GCA_964264875.2 Nyctalus leisleri Lesser noctule Vespertilio leisleri 59465 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Nyctalus HLnycLeis2A GCA_964264875.2 NCBI mNycLei1.hap1.2 Chromosome 2025-04-03 WELLCOME SANGER INSTITUTE 26125689 95320580 14785 350 61 Nyctalus_leisleri__Lesser_noctule__HLnycLeis2B__GCA_964264895.2 Nyctalus leisleri Lesser noctule Vespertilio leisleri 59465 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Nyctalus HLnycLeis2B GCA_964264895.2 NCBI mNycLei1.hap2.2 Scaffold 2025-04-02 WELLCOME SANGER INSTITUTE 28373864 91354900 14246 381 569 Nycticeius_humeralis__evening_bat__HLnycHum2__GCA_007922795.1 Nycticeius humeralis evening bat 27670 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Nycticeius HLnycHum2 GCA_007922795.1 NCBI NycHum_v1_BIUU Scaffold 2019-08-08 Broad Institute 14267 15095 10219 1686 3291 Pipistrellus_abramus__Japanese_house_bat__HLpipAbr1__GCA_044885105.1 Pipistrellus abramus Japanese house bat Pipistrellys abramus,Vespertilio abramus 105295 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipAbr1 GCA_044885105.1 NCBI ASM4488510v1 Chromosome 2024-11-13 East China Normal University 60509936 184650038 14431 708 57 Pipistrellus_hanaki__Hanakis_dwarf_bat__HLpipHan1__GCA_964339955.1 Pipistrellus hanaki Hanakis dwarf bat 412090 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipHan1 GCA_964339955.1 NCBI mPipHan1.1 Chromosome 2024-11-14 Genoscope CEA 48700701 89115682 14528 597 71 Pipistrellus_kuhlii__Kuhls_pipistrelle__HLpipKuh2__GCA_014108245.1 Pipistrellus kuhlii Kuhls pipistrelle Pipistrellus kuhli 59472 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipKuh2 GCA_014108245.1 NCBI, Bat1K 2019-04-16 10239182 80237350 14667 430 99 Pipistrellus_nathusii__Nathusiuss_pipistrelle__HLpipNat1A__GCA_963693515.1 Pipistrellus nathusii Nathusiuss pipistrelle Pipistrellus nathusius,Vespertilio nathusii 59473 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipNat1A GCA_963693515.1 NCBI, Camila Mazzoni 2023-10-14 17739480 97242187 14801 337 58 Pipistrellus_nathusii__Nathusiuss_pipistrelle__HLpipNat1B__GCA_963693525.1 Pipistrellus nathusii Nathusiuss pipistrelle Pipistrellus nathusius,Vespertilio nathusii 59473 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipNat1B GCA_963693525.1 NCBI, Camila Mazzoni 2023-10-14 19092895 86738551 14261 371 564 Pipistrellus_nathusii__Nathusiuss_pipistrelle__HLpipNath2A__GCA_964656225.2 Pipistrellus nathusii Nathusiuss pipistrelle Vespertilio nathusii,Pipistrellus nathusius 59473 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipNath2A GCA_964656225.2 NCBI mPipNat1.hap1.2 Chromosome 2025-05-07 WELLCOME SANGER INSTITUTE 25164913 89973277 14709 405 82 Pipistrellus_pipistrellus__common_pipistrelle__HLpipPip1__GCA_004026625.1 Pipistrellus pipistrellus common pipistrelle Vespertilio pipistrellus 59474 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipPip1 GCA_004026625.1 NCBI PipPip_v1_BIUU Scaffold 2019-01-16 Broad Institute 26707 33992 11766 1150 2280 Pipistrellus_pipistrellus__common_pipistrelle__HLpipPip2__GCA_903992545.1 Pipistrellus pipistrellus common pipistrelle Vespertilio pipistrellus 59474 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipPip2 GCA_903992545.1 NCBI mPipPip1.1 Chromosome 2020-08-06 SC 4446752 94929986 12791 1979 426 Pipistrellus_pipistrellus__Common_pipistrelle__HLpipPipi3A__GCA_965203405.2 Pipistrellus pipistrellus Common pipistrelle Vespertilio pipistrellus 59474 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipPipi3A GCA_965203405.2 NCBI mPipPip2.hap1.2 Chromosome 2025-04-09 WELLCOME SANGER INSTITUTE 18707992 92154671 14658 448 90 Pipistrellus_pipistrellus__Common_pipistrelle__HLpipPipi3B__GCA_965204225.2 Pipistrellus pipistrellus Common pipistrelle Vespertilio pipistrellus 59474 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipPipi3B GCA_965204225.2 NCBI mPipPip2.hap2.2 Scaffold 2025-04-09 WELLCOME SANGER INSTITUTE 26588741 88235013 14682 415 99 Pipistrellus_pygmaeus__soprano_pipistrelle__HLpipPyg1__GCA_949987585.1 Pipistrellus pygmaeus soprano pipistrelle Vespertilio pygmaeus 246814 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipPyg1 GCA_949987585.1 NCBI mPipPyg2.1 Chromosome 2023-05-01 WELLCOME SANGER INSTITUTE 54047000 89507134 14770 379 47 Pipistrellus_javanicus__Javan_pipistrelle__HLpipJav1 Pipistrellus javanicus Javan pipistrelle Scotophilus javanicus 258947 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus HLpipJav1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 19989 2972882 9115 1974 4107 Plecotus_auritus__brown_big-eared_bat__HLpleAur1__GCA_963455305.1 Plecotus auritus brown big-eared bat Vespertilio auritus 61862 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Plecotus HLpleAur1 GCA_963455305.1 NCBI mPleAur1.1 Chromosome 2023-09-20 WELLCOME SANGER INSTITUTE 2948753 186501726 14882 286 28 Plecotus_auritus__brown_big-eared_bat__HLpleAur2 Plecotus auritus brown big-eared bat Vespertilio auritus 61862 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Plecotus HLpleAur2 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-23 45177 169840672 12337 970 1889 Scotomanes_ornatus__harlequin_bat__HLscoOrn1 Scotomanes ornatus harlequin bat Nycticejus ornatus 258957 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Scotomanes HLscoOrn1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 24631 23316691 10843 1464 2889 Scotophilus_kuhlii__Lesser_asiatic_yellow_house_bat__HLscoKuh1 Scotophilus kuhlii Lesser asiatic yellow house bat 153297 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Scotophilus HLscoKuh1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 28915 2683758 10585 1367 3244 Tylonycteris_robustula__Greater_bamboo_bat__HLtylRobu1__GCA_055860955.1 Tylonycteris robustula Greater bamboo bat 526822 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Tylonycteris HLtylRobu1 GCA_055860955.1 NCBI ASM5586095v1 Chromosome 2026-03-13 Chinese Academy of Sciences 43459562 181107895 14732 413 51 Tylonycteris_fulvida__Amber_Bamboo_Bat__HLtylFul1 Tylonycteris fulvida Amber Bamboo Bat Scotophilus fulvidus 1964258 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Tylonycteris HLtylFul1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 32060 3705047 10556 1551 3089 Tylonycteris_pachypus__Lesser_bamboo_bat__HLtylPach1__GCA_058224425.1 Tylonycteris pachypus Lesser bamboo bat Vespertilio pachypus 258959 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Tylonycteris HLtylPach1 GCA_058224425.1 NCBI KIZ_Tpa_1.1 Contig 2026-06-16 Kunming Institute of Zoology, CAS 25631324 25631324 13805 1142 249 Vespertilio_murinus__particolored_bat__HLvesMur1__GCA_963924515.1 Vespertilio murinus particolored bat 59485 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Vespertilio HLvesMur1 GCA_963924515.1 NCBI mVesMur1.1 Chromosome 2024-01-29 WELLCOME SANGER INSTITUTE 3319810 186292382 14722 412 62 Vespertilio_murinus__Particolored_bat__HLvesMuri2A__GCA_963924515.2 Vespertilio murinus Particolored bat 59485 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Vespertilio HLvesMuri2A GCA_963924515.2 NCBI mVesMur1.hap1.2 Chromosome 2025-04-09 WELLCOME SANGER INSTITUTE 48719070 187164881 14785 358 53 Vespertilio_murinus__Particolored_bat__HLvesMuri2B__GCA_963924695.2 Vespertilio murinus Particolored bat 59485 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Vespertilio HLvesMuri2B GCA_963924695.2 NCBI mVesMur1.hap2.2 Scaffold 2025-04-09 WELLCOME SANGER INSTITUTE 42377883 186628349 14269 391 536 Cynopterus_brachyotis__lesser_short-nosed_fruit_bat__HLcynBra1__GCA_009793145.1 Cynopterus brachyotis lesser short-nosed fruit bat 58060 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Cynopterinae; Cynopterus HLcynBra1 GCA_009793145.1 NCBI ASM979314v1 Scaffold 2019-12-23 National University of Singapore 16627 251278 9484 1683 4029 Cynopterus_sphinx__Indian_short-nosed_fruit_bat__HLcynSph1__GCA_030015415.1 Cynopterus sphinx Indian short-nosed fruit bat greater short-nosed fruit bat,Vespertilio sphinx 9400 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Cynopterinae; Cynopterus HLcynSph1 GCA_030015415.1 NCBI ASM3001541v1 Chromosome 2023-05-16 Wuhan University 84235024 145152962 14850 330 16 Cynopterus_sphinx__Indian_short-nosed_fruit_bat__HLcynSph2 Cynopterus sphinx Indian short-nosed fruit bat Vespertilio sphinx,greater short-nosed fruit bat 9400 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Cynopterinae; Cynopterus HLcynSph2 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 22469 90092534 10071 1866 3259 Hypsignathus_monstrosus__Hammer-headed_fruit_bat__HLhypMon1__GCA_985612075.1 Hypsignathus monstrosus Hammer-headed fruit bat 448084 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Epomophorinae; Epomophorini; Hypsignathus HLhypMon1 GCA_985612075.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-08-19 34580935 110205614 14788 397 11 Macroglossus_sobrinus__Long-tongued_fruit_bat__HLmacSob1__GCA_004027375.1 Macroglossus sobrinus Long-tongued fruit bat 326083 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Macroglossinae; Macroglossus HLmacSob1 GCA_004027375.1 NCBI MacSob_v1_BIUU Scaffold 2019-01-16 Broad Institute 338389 453401 14387 460 349 Eidolon_dupreanum__Malagasy_straw-colored_fruit_bat__HLeidDup1__GCA_028627145.1 Eidolon dupreanum Malagasy straw-colored fruit bat Eidolon dupraenum,Eidolon helvum dupraenum 58063 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Eidolon HLeidDup1 GCA_028627145.1 DNA Zoo Consortium 2020-10-15 108606 101563129 12849 856 1491 Eidolon_helvum__straw-colored_fruit_bat__HLeidHel2 Eidolon helvum straw-colored fruit bat 77214 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Eidolon HLeidHel2 DNA Zoo Consortium DNA Zoo Consortium 2019-02-06 12384 81966912 9010 3123 3063 Eidolon_dupreanum__Malagasy_straw-colored_fruit_bat__HLeidDupr2A__GCA_059749095.1 Eidolon dupreanum Malagasy straw-colored fruit bat Pteropus duprÀƒÆ’À‚©anus,Eidolon dupraenum,Eidolon helvum dupraenum 58063 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Eidolon HLeidDupr2A GCA_059749095.1 NCBI mEidDup1.hap1 Chromosome 2026-08-03 Vertebrate Genomes Project 52322063 129550246 14963 226 7 Pteropus_medius__Indian_flying_fox__HLpteGig1__GCA_902729225.1 Pteropus medius Indian flying fox greater Indian fruit bat,Pteropus medius 143291 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLpteGig1 GCA_902729225.1 NCBI Ma_sr-lr_union100 Scaffold 2020-04-15 CIRI-Inserm-U1111 255763 18871253 14142 707 347 Pteropus_pselaphon__Bonin_flying_fox__HLptePse1__GCA_014363405.1 Pteropus pselaphon Bonin flying fox 1496133 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLptePse1 GCA_014363405.1 NCBI P_pselaphon_scaffold_01 Scaffold 2020-08-23 Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies 394964 770409 14749 315 132 Pteropus_rodricensis__Rodriguez_flying_fox__HLpteRod1 Pteropus rodricensis Rodriguez flying fox 77216 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLpteRod1 DNA Zoo Consortium DNA Zoo Consortium 2022-05-16 322735 113379815 14485 338 373 Pteropus_rufus__Malagasy_flying_fox__HLpteRuf1__GCA_028533765.1 Pteropus rufus Malagasy flying fox 196297 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLpteRuf1 GCA_028533765.1 DNA Zoo Consortium 2020-07-09 213552 110476781 14125 445 626 Pteropus_rufus__Malagasy_flying_fox__HLpteRufu2A__GCA_056363885.1 Pteropus rufus Malagasy flying fox 196297 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLpteRufu2A GCA_056363885.1 NCBI mPteRuf1.hap1 Chromosome 2026-03-27 Vertebrate Genomes Project 50994562 120032851 14982 209 5 Pteropus_vampyrus__large_flying_fox__HLpteVam3 Pteropus vampyrus large flying fox 132908 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLpteVam3 DNA Zoo Consortium DNA Zoo Consortium 2021-02-02 19141 123279187 13881 606 709 Pteropus_alecto__black_flying_fox__pteAle1__GCF_000325575.1 Pteropus alecto black flying fox 9402 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus pteAle1 GCF_000325575.1 NCBI ASM32557v1 Scaffold 2013-12-04 BGI 31841 15954802 13417 1282 497 Pteropus_pselaphon__Bonin_flying_fox__HLptePsel2__GCA_056242155.1 Pteropus pselaphon Bonin flying fox 1496133 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus HLptePsel2 GCA_056242155.1 NCBI Pteropus_pselaphon_assembly02 Scaffold 2025-12-26 National Institute for Environmental Studies, Japan 62427956 81982708 14918 258 20 Eonycteris_spelaea__lesser_dawn_bat__HLeonSpe2A Eonycteris spelaea lesser dawn bat 58065 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Eonycteris HLeonSpe2A Bat1K 21 Families project; Morales et al. Nature 2026 Bat1K 21 Families project; Morales et al. Nature 2026 2021-10-15 40266976 117798616 14923 260 13 Rousettus_aegyptiacus__Egyptian_rousette__HLrouAeg4__GCA_014176215.1 Rousettus aegyptiacus Egyptian rousette Rousettus egyptiacus,Rousettus aegypticus 9407 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus HLrouAeg4 GCA_014176215.1 NCBI, Bat1K 2019-10-14 21756723 113811795 14892 285 19 Rousettus_leschenaultii__Leschenaults_rousette__HLrouLes1__GCA_015472975.1 Rousettus leschenaultii Leschenaults rousette Rousettus leschenaulti 9408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus HLrouLes1 GCA_015472975.1 NCBI rouLes_1.0 Scaffold 2020-10-30 Comparative Genomics Laboratory, Center for Information Biology, National Institute of Genetics 40477 32720144 14866 292 38 Rousettus_leschenaultii__Leschenaults_rousette__HLrouLesc2A__GCA_053538355.1 Rousettus leschenaultii Leschenaults rousette Pteropus leschenaultii, 1820),Rousettus leschenaultii (Desmarest 9408 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus HLrouLesc2A GCA_053538355.1 NCBI ASM5353835v1 Chromosome 2025-11-18 SOUTHERN MARINE SCIENCE AND ENGINEERING GUANGDONG LABORATORY (GUANGZHOU) 86068516 116991804 14912 275 9 Rousettus_madagascariensis__Madagascan_rousette__HLrouMad1__GCA_028533395.1 Rousettus madagascariensis Madagascan rousette 77223 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus HLrouMad1 GCA_028533395.1 DNA Zoo Consortium 2020-08-01 63376 85834856 12395 942 1859 Rousettus_madagascariensis__Madagascan_rousette__HLrouMada2A__GCA_059802055.1 Rousettus madagascariensis Madagascan rousette 77223 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus HLrouMada2A GCA_059802055.1 NCBI mRouMad1.hap1 Chromosome 2026-08-04 Vertebrate Genomes Project 97805667 116578547 14919 266 11 Craseonycteris_thonglongyai__hog-nosed_bat__HLcraTho1__GCA_004027555.1 Craseonycteris thonglongyai hog-nosed bat 208972 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Craseonycteridae; Craseonycteris HLcraTho1 GCA_004027555.1 NCBI CraTho_v1_BIUU Scaffold 2019-01-16 Broad Institute 23218 25762 13418 637 1141 Craseonycteris_thonglongyai__hog-nosed_bat__HLcraTho2A__GCA_985607335.1 Craseonycteris thonglongyai hog-nosed bat 208972 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Craseonycteridae; Craseonycteris HLcraTho2A GCA_985607335.1 Bat1K 21 Families project; Morales et al. Nature 2026 2023-06-06 52528329 146141414 14872 299 25 Aselliscus_stoliczkanus__Stoliczkas_trident_bat__HLaseSto2__GCA_043727835.1 Aselliscus stoliczkanus Stoliczkas trident bat Stoliczka's Asian trident bat 188568 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Aselliscus HLaseSto2 GCA_043727835.1 NCBI, Bat1K 2021-10-02 64984936 162130651 14906 285 5 Aselliscus_stoliczkanus__Stoliczkas_trident_bat__HLaseSto4__GCA_033961575.1 Aselliscus stoliczkanus Stoliczkas trident bat Stoliczka's Asian trident bat,Asellia stoliczkana 188568 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Aselliscus HLaseSto4 GCA_033961575.1 NCBI ASM3396157v1 Chromosome 2023-11-28 East China Normal University 73009000 162004500 14914 271 11 Doryrhina_cyclops__cyclops_roundleaf_bat__HLhipCyc2__GCA_043880285.1 Doryrhina cyclops cyclops roundleaf bat Hipposideros cyclops 249021 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Doryrhina HLhipCyc2 GCA_043880285.1 NCBI, Bat1K 2021-10-02 14255823 154073572 14906 265 25 Hipposideros_armiger__great_roundleaf_bat__HLhipArm1__GCA_001890085.1 Hipposideros armiger great roundleaf bat great leaf-nosed bat,great Himalayan leaf-nosed bat 186990 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipArm1 GCA_001890085.1 NCBI ASM189008v1 Scaffold 2016-12-06 SKLEC & IECR 39863 2328177 12552 616 2028 Hipposideros_galeritus__Cantors_roundleaf_bat__HLhipGal1__GCA_004027415.1 Hipposideros galeritus Cantors roundleaf bat 58069 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipGal1 GCA_004027415.1 NCBI HipGal_v1_BIUU Scaffold 2019-01-16 Broad Institute 33704 37985 13581 588 1027 Hipposideros_pendleburyi__Pendleburys_leaf-nosed_bat__HLhipPen1__GCA_021464545.1 Hipposideros pendleburyi Pendleburys leaf-nosed bat Hipposideros turpis pendelburyi 867831 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipPen1 GCA_021464545.1 NCBI ASM2146454v1 Scaffold 2022-01-14 National Science and Technology Development Agency 72646 15398518 14523 473 200 Hipposideros_armiger__great_roundleaf_bat__HLhipArm2 Hipposideros armiger great roundleaf bat great Himalayan leaf-nosed bat,great leaf-nosed bat,Rhinolophus armiger 186990 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipArm2 https://ngdc.cncb.ac.cn/gwh/Assembly/86073/show https://ngdc.cncb.ac.cn/gwh/Assembly/86073/show; Huabin Zhao 2024-04-26 52967232 174323644 14878 310 8 Hipposideros_swinhoii__Pratts_roundleaf_bat__HLhipSwi1 Hipposideros swinhoii Pratts roundleaf bat Hipposideros pratti 188569 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipSwi1 https://ngdc.cncb.ac.cn/gwh/Assembly/86074/show https://ngdc.cncb.ac.cn/gwh/Assembly/86074/show; Huabin Zhao 2024-04-28 58048914 175135807 14876 315 5 Hipposideros_abae__Aba_roundleaf_bat__HLhipAba1A__GCA_985612475.1 Hipposideros abae Aba roundleaf bat 249020 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipAba1A GCA_985612475.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-04-30 10926040 180827067 14808 309 79 Hipposideros_caffer__Sundevalls_roundleaf_bat__HLhipCaf1A__GCA_985611765.1 Hipposideros caffer Sundevalls roundleaf bat Rhinolophus caffer 302402 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipCaf1A GCA_985611765.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-05-01 20974076 172037936 14028 367 801 Hipposideros_caffer__Sundevalls_roundleaf_bat__HLhipCaf2A__GCA_985608535.1 Hipposideros caffer Sundevalls roundleaf bat Rhinolophus caffer 302402 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipCaf2A GCA_985608535.1 TBG 2024-04-30 33314000 181226822 14849 284 63 Hipposideros_jonesi__Joness_roundleaf_bat__HLhipJon1A__GCA_985610605.1 Hipposideros jonesi Joness roundleaf bat 584997 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros HLhipJon1A GCA_985610605.1 Bat1K 21 Families project; Morales et al. Nature 2026 2024-04-30 30697074 180836735 14978 205 13 Hipposideros_larvatus__Intermediate_roundleaf_bat__HLhipLar2__GCA_043727955.1 Hipposideros larvatus Intermediate roundleaf bat 175524 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros; Hipposideros larvatus sensu lato HLhipLar2 GCA_043727955.1 NCBI, Bat1K 2021-10-06 19276934 176501180 15001 184 11 Hipposideros_larvatus__Intermediate_roundleaf_bat__HLhipLar3 Hipposideros larvatus Intermediate roundleaf bat Rhinolophus larvatus 175524 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Hipposideridae; Hipposideros; Hipposideros larvatus sensu lato HLhipLar3 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-23 32329 118242423 12232 938 2026 Lyroderma_lyra__Indian_false_vampire__HLmegLyr2__GCA_004026885.1 Lyroderma lyra Indian false vampire Megaderma lyra, greater false vampire bat 3371112 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Megadermatidae; Lyroderma HLmegLyr2 GCA_004026885.1 NCBI MegLyr_v1_BIUU Scaffold 2019-01-16 Broad Institute 71674 96489 14369 408 419 Lyroderma_lyra__Indian_false_vampire__HLlyrLyr4 Lyroderma lyra Indian false vampire Megaderma lyra,greater false vampire bat 3371112 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Megadermatidae; Lyroderma HLlyrLyr4 https://ngdc.cncb.ac.cn/gwh/Assembly/86075/show https://ngdc.cncb.ac.cn/gwh/Assembly/86075/show 2025-02-23 24518538 94708092 14767 417 12 Macroderma_gigas__Australian_ghost_bat__HLmacGiga1__GCA_055471755.1 Macroderma gigas Australian ghost bat Megaderma gigas,Australian giant false vampire,Australian false vampire bat 9411 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Megadermatidae; Macroderma HLmacGiga1 GCA_055471755.1 NCBI mMacGig1.2_20250303 Scaffold 2026-02-24 The University of Sydney 37658598 100011104 14761 412 23 Megaderma_spasma__lesser_false_vampire_bat__HLmegSpa1__GCA_043880595.1 Megaderma spasma lesser false vampire bat 9414 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Megadermatidae; Megaderma HLmegSpa1 GCA_043880595.1 NCBI, Bat1K 2021-12-23 25520250 120949103 14500 684 12 Rhinolophus_affinis__intermediate_horseshoe_bat__HLrhiAff2__GCA_043728065.1 Rhinolophus affinis intermediate horseshoe bat 59477 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiAff2 GCA_043728065.1 NCBI, Bat1K 2021-10-03 65534120 85365043 15011 179 6 Rhinolophus_affinis__Intermediate_horseshoe_bat__HLrhiAff4__GCA_040057535.1 Rhinolophus affinis Intermediate horseshoe bat 59477 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiAff4 GCA_040057535.1 NCBI ASM4005753v1 Chromosome 2024-06-04 Shaanxi Normal University 201316 92909886 14092 753 351 Rhinolophus_clivosus__Geoffroys_horseshoe_bat__HLrhiCliv1A__GCA_054645015.1 Rhinolophus clivosus Geoffroys horseshoe bat 59478 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiCliv1A GCA_054645015.1 NCBI mRhiCli1.hap1 Chromosome 2026-01-22 Bat1K Project 68120538 93247554 15006 182 8 Rhinolophus_ferrumequinum__greater_horseshoe_bat__HLrhiFer5__GCA_014108255.1 Rhinolophus ferrumequinum greater horseshoe bat 59479 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiFer5 GCA_014108255.1 NCBI, Bat1K 2019-04-28 21749602 91996154 14922 227 47 Rhinolophus_ferrumequinum__greater_horseshoe_bat__HLrhiFer6__GCF_004115265.1 Rhinolophus ferrumequinum greater horseshoe bat 59479 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiFer6 GCF_004115265.1 NCBI mRhiFer1_v1.p Chromosome 2019-05-16 Vertebrate Genomes Project 31900497 88025743 14649 527 20 Rhinolophus_hipposideros__Lesser_horseshoe_bat__HLrhiHip1A__GCA_964194185.1 Rhinolophus hipposideros Lesser horseshoe bat Vespertilio hipposideros 77218 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiHip1A GCA_964194185.1 NCBI mRhiHip2.hap1.1 Chromosome 2024-06-28 WELLCOME SANGER INSTITUTE 2014157 88364482 14891 236 69 Rhinolophus_hipposideros__Lesser_horseshoe_bat__HLrhiHip1B__GCA_964194215.1 Rhinolophus hipposideros Lesser horseshoe bat Vespertilio hipposideros 77218 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiHip1B GCA_964194215.1 NCBI mRhiHip2.hap2.1 Scaffold 2024-06-27 WELLCOME SANGER INSTITUTE 1922115 89090646 14897 219 80 Rhinolophus_hipposideros__Lesser_horseshoe_bat__HLrhiHipp2A__GCA_964194215.2 Rhinolophus hipposideros Lesser horseshoe bat Vespertilio hipposideros 77218 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiHipp2A GCA_964194215.2 NCBI mRhiHip2.hap2.2 Chromosome 2025-04-12 WELLCOME SANGER INSTITUTE 44946000 89071765 14985 200 11 Rhinolophus_perniger_lanosus__Northern_woolly_horseshoe_bat__HLrhiLuc4__GCA_043748575.1 Rhinolophus perniger lanosus Northern woolly horseshoe bat Rhinolophus lanosus 337453 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiLuc4 GCA_043748575.1 NCBI, Bat1K 2021-10-04 53323821 154900566 14948 241 7 Rhinolophus_rex__king_horseshoe_bat__HLrhiRex1__GCA_041825415.1 Rhinolophus rex king horseshoe bat 188572 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiRex1 GCA_041825415.1 NCBI ASM4182541v1 Chromosome 2024-09-09 East China Normal University 75261663 94173463 15001 187 8 Rhinolophus_yonghoiseni__Yong_Hoi_Sens_woolly_horseshoe_bat__HLrhiSed2__GCA_043880425.1 Rhinolophus yonghoiseni Yong Hoi Sens woolly horseshoe bat Rhinolophus yonghoiseni 59480 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiSed2 GCA_043880425.1 NCBI, Bat1K 2021-10-03 28095277 181652838 14854 335 7 Rhinolophus_sinicus__Chinese_rufous_horseshoe_bat__HLrhiSin1__GCA_001888835.1 Rhinolophus sinicus Chinese rufous horseshoe bat Rhinolophus rouxii sinicus 89399 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiSin1 GCA_001888835.1 NCBI ASM188883v1 Scaffold 2016-12-04 SKLEC & IECR 37803 3754400 14388 539 269 Rhinolophus_sinicus__Chinese_rufous_horseshoe_bat__HLrhiSin4__GCA_036562045.1 Rhinolophus sinicus Chinese rufous horseshoe bat Rhinolophus rouxii sinicus 89399 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiSin4 GCA_036562045.1 NCBI ASM3656204v1 Chromosome 2024-06-26 Kunming Institute of Zoology, Chinese Academy of Sciences 42906106 166556632 14546 390 260 Rhinolophus_trifoliatus__Trefoil_horseshoe_bat__HLrhiTri2__GCA_043728145.1 Rhinolophus trifoliatus Trefoil horseshoe bat 430492 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiTri2 GCA_043728145.1 NCBI, Bat1K 2021-10-03 11115074 184920896 14784 381 31 Rhinolophus_pearsonii__Pearsons_horseshoe_bat__HLrhiPea1 Rhinolophus pearsonii Pearsons horseshoe bat Rhinolophus pearsoni 188571 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiPea1 https://ngdc.cncb.ac.cn/gwh/Assembly/86072/show https://ngdc.cncb.ac.cn/gwh/Assembly/86072/show; Huabin Zhao 2024-04-26 41003416 172778956 14806 379 11 Rhinolophus_pusillus__Least_horseshoe_bat__HLrhiPus1 Rhinolophus pusillus Least horseshoe bat 159858 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiPus1 Sciencedb https://doi.org/10.57760/sciencedb.11285 Sciencedb https://doi.org/10.57760/sciencedb.11285 2024-12-26 41071 69535741 12250 940 2006 Rhinolophus_sinicus__Chinese_rufous_horseshoe_bat__HLrhiSin3 Rhinolophus sinicus Chinese rufous horseshoe bat Rhinolophus rouxii sinicus 89399 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiSin3 https://ngdc.cncb.ac.cn/gwh/Assembly/86071/show https://ngdc.cncb.ac.cn/gwh/Assembly/86071/show; Huabin Zhao 2023-02-08 45677871 182896001 14906 282 8 Rhinolophus_darlingi__Darlings_horseshoe_bat__HLrhiDarl1A__GCA_057427945.1 Rhinolophus darlingi Darlings horseshoe bat Rhinolophus darlingii 49443 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiDarl1A GCA_057427945.1 NCBI mRhiDar1.hap1 Chromosome 2026-05-11 Bat1K Project 58163572 88923239 14996 191 9 Rhinolophus_blasii__Blasius_horseshoe_bat__HLrhiBlas1A__GCA_057428245.1 Rhinolophus blasii Blasius horseshoe bat 519037 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiBlas1A GCA_057428245.1 NCBI mRhiBla1.hap1 Chromosome 2026-05-11 Bat1K Project 40789523 88727219 15000 193 3 Rhinolophus_sinicus__Chinese_rufous_horseshoe_bat__HLrhiSini5__GCA_057876585.1 Rhinolophus sinicus Chinese rufous horseshoe bat Rhinolophus rouxii sinicus 89399 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiSini5 GCA_057876585.1 NCBI RSI-T2T Chromosome 2026-06-03 Kunming Institute of Zoology, Chinese Academy of Sciences 188912077 188912077 15006 182 8 Rhinolophus_lepidus__Blyths_horseshoe_bat__HLrhiLepi1__GCA_059469455.1 Rhinolophus lepidus Blyths horseshoe bat 188570 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiLepi1 GCA_059469455.1 NCBI ASM5946945v1 Scaffold 2026-07-16 Ashoka University 5109789 5296598 14349 390 457 Rhinolophus_foetidus__Great_woolly_horseshoe_bat__HLrhiLuc5__GCA_985608985.1 Rhinolophus foetidus Great woolly horseshoe bat Rhinolophus foetidus 337453 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus HLrhiLuc5 GCA_985608985.1 Bat1K 21 Families project; Morales et al. Nature 2026 2021-10-03 32782373 186530955 14855 311 30 Triaenops_persicus__Persian_trident_bat__HLtriPer1A__GCA_985607305.1 Triaenops persicus Persian trident bat 329870 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinonycteridae; Triaenops HLtriPer1A GCA_985607305.1 Bat1K 21 Families project; Morales et al. Nature 2026 2022-09-01 48582998 161736923 14925 261 10 Rhinopoma_cystops__Egyptian_mouse-tailed_bat__HLrhiCyst1A__GCA_055761895.1 Rhinopoma cystops Egyptian mouse-tailed bat Rhinopoma hardwickii cystops 1034335 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinopomatidae; Rhinopoma HLrhiCyst1A GCA_055761895.1 NCBI mRhiCys1.hap1 Chromosome 2026-03-10 Bat1K Project 31224982 160986869 14973 213 10 Rhinopoma_cystops__Egyptian_mouse-tailed_bat__HLrhiCyst1B__GCA_055761905.1 Rhinopoma cystops Egyptian mouse-tailed bat Rhinopoma hardwickii cystops 1034335 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinopomatidae; Rhinopoma HLrhiCyst1B GCA_055761905.1 NCBI mRhiCys1.hap2 Chromosome 2026-03-10 Bat1K Project 32762973 154095941 14471 214 511 Rhinopoma_microphyllum__Greater_mouse-tailed_bat__HLrhiMic1__GCA_043880545.1 Rhinopoma microphyllum Greater mouse-tailed bat 173903 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinopomatidae; Rhinopoma HLrhiMic1 GCA_043880545.1 NCBI, Bat1K 2021-10-19 33347918 146810189 14980 199 17 Rhinopoma_muscatellum__Small_mouse-tailed_bat__HLrhiMus1__GCA_985616865.1 Rhinopoma muscatellum Small mouse-tailed bat 173902 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinopomatidae; Rhinopoma HLrhiMus1 GCA_985616865.1 Bat1K 21 Families project; Morales et al. Nature 2026 2022-11-16 29866387 167296730 14995 192 9 Erinaceus_europaeus__western_European_hedgehog__HLeriEur3__GCF_950295315.1 Erinaceus europaeus western European hedgehog European hedgehog,common hedgehog 9365 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus HLeriEur3 GCF_950295315.1 NCBI mEriEur2.1 Chromosome 2023-05-01 WELLCOME SANGER INSTITUTE 999919 126757761 14128 600 468 Solenodon_paradoxus__Hispaniolan_solenodon__HLsolPar1__GCA_004363575.1 Solenodon paradoxus Hispaniolan solenodon 79805 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Solenodontidae; Solenodon HLsolPar1 GCA_004363575.1 NCBI SolPar_v1_BIUU Scaffold 2019-03-22 Broad Institute 236847 407682 14402 456 338 Crocidura_zimmermanni__Zimmermanns_shrew__HLcroZim1__GCA_965212715.1 Crocidura zimmermanni Zimmermanns shrew 387912 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Crocidura HLcroZim1 GCA_965212715.1 NCBI mCroZim1.1 Chromosome 2025-03-20 Genoscope CEA 28351139 127229103 14223 665 308 Crocidura_gueldenstaedtii__Guldenstadts_white-toothed_shrew__HLcroGuel1__GCA_965212715.2 Crocidura gueldenstaedtii Guldenstadts white-toothed shrew Sorex Gùˆldenstaedtii,Lesser white-toothed shrew,lesser shrew,Sorex suaveolens,Crocidura suaveolens gueldenstaedtii 458323 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Crocidura; Crocidura suaveolens HLcroGuel1 GCA_965212715.2 NCBI mCroZim1.2 Chromosome 2025-07-07 Genoscope CEA 28351139 127229103 14228 665 303 Scutisorex_somereni__Hero_shrew__HLscuSome1__GCA_054737625.1 Scutisorex somereni Hero shrew 150088 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Scutisorex HLscuSome1 GCA_054737625.1 NCBI ScuSom1 Scaffold 2026-01-26 Louisiana State University 3169756 109823726 13920 836 440 Suncus_etruscus__white-toothed_pygmy_shrew__HLsunEtr1__GCF_024139225.1 Suncus etruscus white-toothed pygmy shrew Sorex etruscus 109475 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Suncus HLsunEtr1 GCF_024139225.1 NCBI mSunEtr1.pri.cur Chromosome 2022-07-06 Vertebrate Genomes Project 5042816 131952995 13463 1386 347 Suncus_murinus__House_shrew__HLsunMuri1__GCA_055769025.1 Suncus murinus House shrew Sorex murinus,Asian house shrew 9378 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Suncus HLsunMuri1 GCA_055769025.1 NCBI Smur_1.0 Chromosome 2026-03-10 Guangzhou university 108479493 128092613 14127 744 325 Suncus_etruscus__White-toothed_pygmy_shrew__HLsunEtr2 Suncus etruscus White-toothed pygmy shrew Sorex etruscus 109475 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Suncus HLsunEtr2 Hiller lab, Senckenberg Hiller lab, Senckenberg 2024-11-09 4995335 127266172 14196 706 294 Blarina_brevicauda__Short-tailed_shrew__HLblaBrev1__GCA_051295465.1 Blarina brevicauda Short-tailed shrew northern short-tailed shrew,Sorex brevicaudus 9387 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Blarina HLblaBrev1 GCA_051295465.1 NCBI mBlaBre1_p1.1 Contig 2025-07-11 Canada's national platform for genome sequencing and analysis 2920142 2920142 13360 802 1034 Cryptotis_parvus__least_shrew__HLcryPar1__GCA_021461705.1 Cryptotis parvus least shrew Cryptotis parva,Sorex parvus 183661 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Cryptotis HLcryPar1 GCA_021461705.1 NCBI Cryptotis parva assembly 1.0 Contig 2022-01-13 National Institutes of Health 112257 112257 1072 10302 3822 Sorex_araneus__European_shrew__HLsorAra3__GCF_027595985.1 Sorex araneus European shrew Eurasian shrew 42254 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorAra3 GCF_027595985.1 NCBI mSorAra2.pri Chromosome 2023-01-09 Vertebrate Genomes Project 4024507 374364821 14313 631 252 Sorex_cinereus__cinereus_shrew__HLsorCin1__GCA_026122425.1 Sorex cinereus cinereus shrew Sorex arcticus cinereus 36803 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorCin1 GCA_026122425.1 NCBI SC2_V1 Scaffold 2022-11-10 Trent University 52203 2625934 10450 1050 3696 Sorex_fumeus__smoky_shrew__HLsorFum1__GCF_029834395.1 Sorex fumeus smoky shrew 62283 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorFum1 GCF_029834395.1 NCBI SorFum_2.1 Contig 2023-04-17 Trent University 42400022 42400022 14285 642 269 Sorex_hoyi__Pygmy_shrew__HLsorHoyi1__GCA_051176035.1 Sorex hoyi Pygmy shrew 9384 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorHoyi1 GCA_051176035.1 NCBI mSorHoy1_p1.1 Contig 2025-07-02 Canada's national platform for genome sequencing and analysis 7586340 7586340 13814 534 848 Sorex_maritimensis__Maritime_shrew__HLsorMar1__GCA_030324115.1 Sorex maritimensis Maritime shrew Sorex arcticus maritimensis 395025 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorMar1 GCA_030324115.1 NCBI SorMar_1.0 Scaffold 2023-06-22 Trent University 39490 105017 9783 993 4420 Sorex_ornatus__Ornate_shrew__HLsorOrn1A__GCA_041430695.1 Sorex ornatus Ornate shrew 126318 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorOrn1A GCA_041430695.1 NCBI mSorOrn1.0.p Scaffold 2024-08-22 UCLA 15899521 115205878 14382 638 176 Sorex_ornatus__Ornate_shrew__HLsorOrn1B__GCA_041430635.1 Sorex ornatus Ornate shrew 126318 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorOrn1B GCA_041430635.1 NCBI mSorOrn1.0.a Scaffold 2024-08-22 UCLA 19322863 113643214 14398 573 225 Sorex_monticolus__Montane_shrew__HLsorMont1__GCA_059051765.1 Sorex monticolus Montane shrew 62903 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex HLsorMont1 GCA_059051765.1 NCBI mSorMot1_p1.1 Scaffold 2026-07-07 Canada's national platform for genome sequencing and analysis 20409050 111567860 13921 601 674 Condylura_cristata__star-nosed_mole__conCri1__GCF_000260355.1 Condylura cristata star-nosed mole 143302 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Condylura conCri1 GCF_000260355.1 NCBI ConCri1.0 Scaffold 2012-05-01 Broad Institute 46163 55520359 13501 737 958 Desmana_moschata__Insectivores__HLdesMos1__GCA_965120235.1 Desmana moschata Insectivores Castor moschata 182682 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Desmana HLdesMos1 GCA_965120235.1 NCBI Dmo_genome Scaffold 2025-02-07 Research Centre in Biodiversity and Genetic Resources - InBIO Associate Laboratory 28485 55067 13496 553 1147 Galemys_pyrenaicus__Pyrenean_desman__HLgalPyr1__GCA_019455555.1 Galemys pyrenaicus Pyrenean desman Pyrenean desman 202257 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Galemys HLgalPyr1 GCA_019455555.1 NCBI Gpyr_1.0 Scaffold 2021-08-05 Institute of Evolutionary Biology (CSIC-UPF) 64544 8503682 14752 273 171 Mogera_wogura__Japanese_mole__HLmogWogu2__GCA_054767415.1 Mogera wogura Japanese mole Talpa wogura 62295 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Mogera HLmogWogu2 GCA_054767415.1 NCBI Mwogura_1.0 Scaffold 2025-04-11 Hokkaido University 105512 40941171 13354 1094 748 Scalopus_aquaticus__eastern_mole__HLscaAqu1__GCA_004024925.1 Scalopus aquaticus eastern mole 71119 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Scalopus HLscaAqu1 GCA_004024925.1 NCBI ScaAqu_v1_BIUU Scaffold 2019-01-15 Broad Institute 72421 94879 14172 410 614 Scaptochirus_moschatus__Short-faced_mole__HLscaMos1__GCA_042919465.1 Scaptochirus moschatus Short-faced mole 446353 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Scaptochirus HLscaMos1 GCA_042919465.1 NCBI ASM4291946v1 Chromosome 2024-10-15 Qufu Normal University 67659624 110510357 14877 277 42 Talpa_europaea__European_mole__HLtalEur1A__GCA_964194135.1 Talpa europaea European mole Talpa sp. PPW-2003 9375 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa HLtalEur1A GCA_964194135.1 NCBI mTalEur1.hap1.1 Chromosome 2024-06-28 WELLCOME SANGER INSTITUTE 3421604 136888642 14837 289 70 Talpa_europaea__European_mole__HLtalEur1B__GCA_964194205.1 Talpa europaea European mole Talpa sp. PPW-2003 9375 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa HLtalEur1B GCA_964194205.1 NCBI mTalEur1.hap2.1 Scaffold 2024-06-27 WELLCOME SANGER INSTITUTE 3507589 136515677 14844 279 73 Talpa_occidentalis__Iberian_mole__HLtalOcc1__GCA_014898055.1 Talpa occidentalis Iberian mole 50954 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa HLtalOcc1 GCA_014898055.1 NCBI MPIMG_talOcc4 Scaffold 2020-10-19 Max Planck Institute for Molecular Genetics 2611709 119847213 14267 860 69 Uropsilus_gracilis__gracile_shrew_mole__HLuroGra1__GCA_004024945.1 Uropsilus gracilis gracile shrew mole 182669 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Eulipotyphla; Talpidae; Uropsilus HLuroGra1 GCA_004024945.1 NCBI UroGra_v1_BIUU Scaffold 2019-01-15 Broad Institute 43618 55035 11514 977 2705 Equus_asinus__ass__HLequAsi3__GCA_016077325.1 Equus asinus ass African wild ass,donkey,African ass,Somali wild ass,domestic ass 9793 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequAsi3 GCA_016077325.1 NCBI EquAsi1.0 Chromosome 2020-12-15 Dairy Cattle Research Center, Shandong Academy of Agricultural Sciences 25075547 98598843 13558 1610 28 Equus_asinus__Ass__HLequAsin4__GCF_041296235.1 Equus asinus Ass African wild ass,African ass,Somali wild ass,domestic ass,donkey 9793 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequAsin4 GCF_041296235.1 NCBI EquAss-T2T_v2 Chromosome 2024-12-12 University of Kentucky 102829910 101318199 15128 65 3 Equus_asinus__Donkey__HLequAsin5__GCA_052445885.1 Equus asinus Donkey ass,African ass,domestic ass,Somali wild ass,African wild ass 9793 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequAsin5 GCA_052445885.1 NCBI ASM5244588v1 Chromosome 2025-09-04 Inner Mongolia University 99746532 99746532 15132 60 4 Equus_caballus__Horse__HLequCaba4__GCF_041296265.1 Equus caballus Horse Equus przewalskii f. caballus,equine,Equus przewalskii forma caballus,domestic horse 9796 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequCaba4 GCF_041296265.1 NCBI TB-T2T Chromosome 2024-08-16 University of Kentucky 99223387 99223387 15126 66 4 Equus_caballus__Horse__HLequCaba5__GCA_052818215.1 Equus caballus Horse Equus przewalskii f. caballus,equine,domestic horse,Equus przewalskii forma caballus 9796 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequCaba5 GCA_052818215.1 NCBI T2T-horse1.0 Complete Genome 2025-09-24 China Agricultural University 100959084 100959084 15128 66 2 Equus_kiang__Kiang__HLequKian1__GCA_052150635.1 Equus kiang Kiang 94398 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequKian1 GCA_052150635.1 NCBI ASM5215063v1 Complete Genome 2025-08-19 Inner Mongolia University 107027433 107027433 15130 64 2 Equus_przewalskii__Przewalskis_horse__HLequPrze2__GCF_037783145.1 Equus przewalskii Przewalskis horse Equus caballus przewalskii,Equus ferus przewalskii,Przewalski horse 9798 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequPrze2 GCF_037783145.1 NCBI EquPr2 Chromosome 2024-04-01 University of Minnesota 25995503 85145959 15062 119 15 Equus_quagga__plains_zebra__HLequQua2__GCF_021613505.1 Equus quagga plains zebra Equus burchellii quagga 89248 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequQua2 GCF_021613505.1 NCBI UCLA_HA_Equagga_1.0 Chromosome 2022-01-31 University of California Los Angeles 427941 122556673 14857 277 62 Equus_zebra__mountain_zebra__HLequZeb1 Equus zebra mountain zebra 9791 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequZeb1 DNA Zoo Consortium DNA Zoo Consortium 2021-02-19 182436 150600390 14727 231 238 Equus_caballus__horse__equCab3__GCF_002863925.1 Equus caballus horse Equus przewalskii f. caballus,equine,domestic horse,Equus przewalskii forma caballus 9796 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus equCab3 GCF_002863925.1 NCBI EquCab3.0 Chromosome 2018-01-05 University of Louisville 1502753 87230776 15033 146 17 Equus_przewalskii__Przewalskis_horse__equPrz1__GCF_000696695.1 Equus przewalskii Przewalskis horse Equus ferus przewalskii,Przewalski horse,Equus caballus przewalskii 9798 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus equPrz1 GCF_000696695.1 NCBI Burgud Scaffold 2014-06-05 College of Animal Science, Inner Mongolian Agricultural University, China 57610 513800 12769 1758 669 Equus_grevyi__Grevys_zebra__HLequGrev1A__GCA_057876975.1 Equus grevyi Grevys zebra 9792 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus HLequGrev1A GCA_057876975.1 NCBI mEquGre1.hap1 Chromosome 2026-06-03 Vertebrate Genomes Project 56690318 132067815 15036 111 49 Equus_asinus_asinus__ass__HLequAsiAsi2__GCA_003033725.1 Equus asinus asinus ass domestic ass,donkey,African ass,Somali wild ass,African wild ass 83772 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus asinus HLequAsiAsi2 GCA_003033725.1 NCBI ASM303372v1 Scaffold 2018-04-04 Centre for GeoGenetics 134070 15144613 14283 616 297 Equus_quagga_quagga__quagga__HLequQua1 Equus quagga quagga quagga Equus quagga,Burchell's zebra,Equus quagga quagga,-,Equus quagga burchellii,plains zebra 89252 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus quagga HLequQua1 DNA Zoo Consortium DNA Zoo Consortium 2021-04-12 89245 114504116 14245 383 568 Equus_quagga_boehmi__Grants_zebra__HLequQuaBoe1 Equus quagga boehmi Grants zebra Equus quagga boehmi,Burchell's zebra,Equus burchelli boehmi,plains zebra 89250 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus quagga HLequQuaBoe1 DNA Zoo Consortium DNA Zoo Consortium 2020-08-01 89245 114504116 14243 384 569 Ceratotherium_simum_cottoni__northern_white_rhinoceros__HLcerSimCot2__GCA_021442165.1 Ceratotherium simum cottoni northern white rhinoceros square-lipped rhinoceros,white rhinoceros,northern square-lipped rhinoceros,Rhinoceros simus 310713 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Ceratotherium; Ceratotherium simum HLcerSimCot2 GCA_021442165.1 NCBI ASM2144216v1 Chromosome 2022-01-12 Max Planck Institute for Molecular Genetics 16022912 65935509 14721 448 27 Ceratotherium_simum_simum__Southern_white_rhinoceros__HLcerSimuSim3__GCA_023653735.1 Ceratotherium simum simum Southern white rhinoceros Rhinoceros simus,white rhinoceros,square-lipped rhinoceros,southern square-lipped rhinoceros 73337 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Ceratotherium; Ceratotherium simum HLcerSimuSim3 GCA_023653735.1 NCBI ASM2365373v1 Chromosome 2022-06-29 Northwest A&F University 50391373 67555069 15055 130 11 Dicerorhinus_sumatrensis_sumatrensis__Sumatran_rhinoceros__HLdicSum1__GCA_002844835.1 Dicerorhinus sumatrensis sumatrensis Sumatran rhinoceros 310712 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Dicerorhinus; Dicerorhinus sumatrensis HLdicSum1 GCA_002844835.1 NCBI ASM284483v1 Scaffold 2017-12-19 Marshall University Genomic Core Facility 89455 614498 14796 222 178 Dicerorhinus_sumatrensis_harrissoni__Sumatran_rhinoceros__HLdicSumHar2__GCA_014189135.1 Dicerorhinus sumatrensis harrissoni Sumatran rhinoceros 310711 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Dicerorhinus; Dicerorhinus sumatrensis HLdicSumHar2 GCA_014189135.1 NCBI NRM_Dsumatrensis_v1.fasta Scaffold 2020-08-14 Swedish Museum of Natural History 70892 54482381 14730 358 108 Dicerorhinus_sumatrensis_sumatrensis__Sumatran_rhinoceros__HLdicSumaSum3A__GCA_060039915.1 Dicerorhinus sumatrensis sumatrensis Sumatran rhinoceros Rhinoceros sumatrensis 310712 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Dicerorhinus; Dicerorhinus sumatrensis HLdicSumaSum3A GCA_060039915.1 NCBI mDicSum1.hap1 Chromosome 2026-08-12 Vertebrate Genomes Project 23513502 67012138 15055 132 9 Diceros_bicornis_minor__black_rhinoceros__HLdicBicMin2__GCA_020826845.1 Diceros bicornis minor black rhinoceros Rhinoceros bicornis 77932 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Diceros; Diceros bicornis HLdicBicMin2 GCA_020826845.1 NCBI mDicBic1.mat.cur Chromosome 2021-11-10 Vertebrate Genomes Project 28468213 65026825 14991 195 10 Rhinoceros_unicornis__greater_Indian_rhinoceros__HLrhiUni1 Rhinoceros unicornis greater Indian rhinoceros Indian rhinoceros 9809 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Rhinoceros HLrhiUni1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-01 105321 56870999 14397 303 496 Tapirus_indicus__Asiatic_tapir__HLtapInd1__GCA_004024905.1 Tapirus indicus Asiatic tapir Malayan tapir 9802 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Tapiridae; Tapirus HLtapInd1 GCA_004024905.1 NCBI TapInd_v1_BIUU Scaffold 2019-01-15 Broad Institute 225792 308930 14806 156 234 Tapirus_indicus__Asiatic_tapir__HLtapInd2 Tapirus indicus Asiatic tapir Malayan tapir 9802 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Tapiridae; Tapirus HLtapInd2 DNA Zoo Consortium DNA Zoo Consortium 2020-09-02 155433 111226585 14478 296 422 Tapirus_indicus__Asiatic_tapir__HLtapIndi3A__GCA_031878655.1 Tapirus indicus Asiatic tapir Malayan tapir 9802 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Tapiridae; Tapirus HLtapIndi3A GCA_031878655.1 NCBI mTapInd1.hap1 Chromosome 2023-09-25 Vertebrate Genomes Project 52012120 129321892 15099 92 5 Tapirus_indicus__Asiatic_tapir__HLtapIndi3B__GCA_031878705.1 Tapirus indicus Asiatic tapir Malayan tapir 9802 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Tapiridae; Tapirus HLtapIndi3B GCA_031878705.1 NCBI mTapInd1.hap2 Chromosome 2023-09-25 Vertebrate Genomes Project 56553937 129754520 15095 91 10 Tapirus_terrestris__Brazilian_tapir__HLtapTer1__GCA_004025025.1 Tapirus terrestris Brazilian tapir South American tapir,lowland tapir 9801 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Tapiridae; Tapirus HLtapTer1 GCA_004025025.1 NCBI TapTer_v1_BIUU Scaffold 2019-01-15 Broad Institute 164193 186384 14576 287 333 Tapirus_terrestris__Brazilian_tapir__HLtapTer2 Tapirus terrestris Brazilian tapir South American tapir,lowland tapir 9801 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Perissodactyla; Tapiridae; Tapirus HLtapTer2 DNA Zoo Consortium DNA Zoo Consortium 2021-04-13 45588 47139982 13543 621 1032 Manis_javanica__Malayan_pangolin__HLmanJav3__GCA_024605085.1 Manis javanica Malayan pangolin Sunda pangolin,Javan pangolin 9974 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Pholidota; Manidae; Manis HLmanJav3 GCA_024605085.1 NCBI ASM2460508v1 Contig 2022-08-09 Guangxi University 15813259 15813259 14524 565 107 Manis_javanica__Malayan_pangolin__HLmanJava4__GCF_040802235.1 Manis javanica Malayan pangolin Sunda pangolin,Javan pangolin 9974 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Pholidota; Manidae; Manis HLmanJava4 GCF_040802235.1 NCBI MJ_LKY Chromosome 2024-07-22 Northeast Forestry University 61244301 141798549 14728 460 8 Manis_pentadactyla__Chinese_pangolin__HLmanPen4__GCF_030020395.1 Manis pentadactyla Chinese pangolin 143292 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Pholidota; Manidae; Manis HLmanPen4 GCF_030020395.1 NCBI mManPen7.hap1 Chromosome 2023-05-23 Vertebrate Genomes Project 25547713 149551276 14708 449 39 Phataginus_tricuspis__Tree_pangolin__HLmanTri1__GCA_004765945.1 Phataginus tricuspis Tree pangolin Manis tricuspis 358128 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Pholidota; Manidae; Phataginus HLmanTri1 GCA_004765945.1 NCBI ManTri_v1_BIUU Scaffold 2019-04-09 Broad Institute 23755 25241 13247 888 1061 Phataginus_tricuspis__Tree_pangolin__HLphaTri2 Phataginus tricuspis Tree pangolin Manis tricuspis 358128 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Pholidota; Manidae; Phataginus HLphaTri2 DNA Zoo Consortium DNA Zoo Consortium 2020-07-05 110271 46351422 13884 852 460 Smutsia_gigantea__Giant_pangolin__HLsmuGig1__GCA_032199065.1 Smutsia gigantea Giant pangolin Manis gigantea 1559511 Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Pholidota; Manidae; Smutsia HLsmuGig1 GCA_032199065.1 NCBI SGIG_CAM011_5_02_2020 Scaffold 2023-09-29 Universite Toulouse III - Paul Sabatier 229536 230024 12597 1035 1564 Tolypeutes_matacus__southern_three-banded_armadillo__HLtolMat1__GCA_004025125.1 Tolypeutes matacus southern three-banded armadillo 183749 Mammalia; Theria; Eutheria; Xenarthra; Cingulata; Chlamyphoridae; Tolypeutes HLtolMat1 GCA_004025125.1 NCBI TolMat_v1_BIUU Scaffold 2019-01-15 Broad Institute 9441 10217 3538 1167 10491 Tolypeutes_matacus__southern_three-banded_armadillo__HLtolMata2__GCA_026826555.1 Tolypeutes matacus southern three-banded armadillo 183749 Mammalia; Theria; Eutheria; Xenarthra; Cingulata; Chlamyphoridae; Tolypeutes HLtolMata2 GCA_026826555.1 NCBI mTolMat1 Scaffold 2022-12-12 University of California, Davis 129379 12561802 14763 296 137 Dasypus_novemcinctus__nine-banded_armadillo__HLdasNov4__GCF_030445035.1 Dasypus novemcinctus nine-banded armadillo 9361 Mammalia; Theria; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus HLdasNov4 GCF_030445035.1 NCBI mDasNov1.hap2 Chromosome 2023-07-13 Vertebrate Genomes Project 14295626 130056132 14742 405 49 Dasypus_novemcinctus__Nine-banded_armadillo__HLdasNove5A__GCF_030445035.2 Dasypus novemcinctus Nine-banded armadillo Dasypus fenestratus 9361 Mammalia; Theria; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus HLdasNove5A GCF_030445035.2 NCBI mDasNov1.1.hap2 Chromosome 2023-07-13 Vertebrate Genomes Project 13963394 127081865 14743 403 50 Bradypus_torquatus__Maned_three-toed_sloth__HLbraTor4__GCA_963992745.1 Bradypus torquatus Maned three-toed sloth 227087 Mammalia; Theria; Eutheria; Xenarthra; Pilosa; Folivora; Bradypodidae; Bradypus HLbraTor4 GCA_963992745.1 NCBI, CollOmic 2023-11-26 4748776 156600181 14783 328 85 Choloepus_didactylus__southern_two-toed_sloth__HLchoDid2__GCF_015220235.1 Choloepus didactylus southern two-toed sloth Choloepus brasiliensis Fitzinger 1871,Choloepus brasiliensis 27675 Mammalia; Theria; Eutheria; Xenarthra; Pilosa; Folivora; Megalonychidae; Choloepus HLchoDid2 GCF_015220235.1 NCBI mChoDid1.pri Chromosome 2020-11-03 Vertebrate Genomes Project 20994632 146178362 14654 521 21 Choloepus_hoffmanni__Hoffmanns_two-fingered_sloth__HLchoHof3 Choloepus hoffmanni Hoffmanns two-fingered sloth Hoffmann's two-toed sloth 9358 Mammalia; Theria; Eutheria; Xenarthra; Pilosa; Folivora; Megalonychidae; Choloepus HLchoHof3 DNA Zoo Consortium DNA Zoo Consortium 2020-07-10 62424 140950122 14297 555 344 Myrmecophaga_tridactyla__giant_anteater__HLmyrTri2 Myrmecophaga tridactyla giant anteater 71006 Mammalia; Theria; Eutheria; Xenarthra; Pilosa; Vermilingua; Myrmecophagidae; Myrmecophaga HLmyrTri2 DNA Zoo Consortium DNA Zoo Consortium 2022-07-13 1101534 111305850 15016 129 51 Tamandua_tetradactyla__southern_tamandua__HLtamTet2__GCA_023851605.1 Tamandua tetradactyla southern tamandua 48850 Mammalia; Theria; Eutheria; Xenarthra; Pilosa; Vermilingua; Myrmecophagidae; Tamandua HLtamTet2 GCA_023851605.1 NCBI mTamTet1.pri Chromosome 2022-06-22 Vertebrate Genomes Project 9869167 174634624 15081 111 4 Antechinus_flavipes__yellow-footed_antechinus__HLantFla1__GCA_016432865.1 Antechinus flavipes yellow-footed antechinus 38775 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus HLantFla1 GCA_016432865.1 NCBI AdamAnt Chromosome 2020-12-29 Nanjing Normal University 51843704 636717922 -1 -1 -1 Antechinus_stuartii__brown_antechinus__HLantStu1__GCA_016696395.1 Antechinus stuartii brown antechinus 9283 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus HLantStu1 GCA_016696395.1 NCBI USYD_AStu_M Scaffold 2021-01-15 University of Sydney 77883 72733491 -1 -1 -1 Dasyuroides_byrnei__Kowari__HLdasByrn1__GCA_053524995.1 Dasyuroides byrnei Kowari Dasycercus byrnei 32544 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Dasyuroides HLdasByrn1 GCA_053524995.1 NCBI mDasByr.1.2_20251403 Scaffold 2025-11-18 University of Sydney 4141739 620710154 12071 1580 1545 Dasyurus_maculatus__Spotted-tailed_quoll__HLdasMacu1__GCA_048593285.1 Dasyurus maculatus Spotted-tailed quoll Viverra maculata 9281 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Dasyurus HLdasMacu1 GCA_048593285.1 NCBI ASM4859328v1 Chromosome 2025-03-17 University of Connecticut 93424779 622380813 11767 1617 1812 Dasyurus_viverrinus__eastern_quoll__HLdasViv1__GCA_020854095.1 Dasyurus viverrinus eastern quoll 9279 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Dasyurus HLdasViv1 GCA_020854095.1 NCBI UniMelb_DasViv_v1.0 Chromosome 2021-11-12 The University of Melbourne 13753271 628486596 -1 -1 -1 Sarcophilus_harrisii__Tasmanian_devil__HLsarHarr4__GCF_902635505.1 Sarcophilus harrisii Tasmanian devil Ursinus harrisii,Sarcophilus laniarius (Owen, 1838),Sarcophilus laniarius 9305 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus HLsarHarr4 GCF_902635505.1 NCBI mSarHar1.11 Chromosome 2019-11-07 SC 62339597 611347268 11724 1867 1605 Sminthopsis_crassicaudata__fat-tailed_dunnart__HLsmiCra1 Sminthopsis crassicaudata fat-tailed dunnart Phascogale crassicaudata 9301 Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis HLsmiCra1 DNA Zoo Consortium DNA Zoo Consortium 2022-07-12 8654000 578922139 -1 -1 -1 Myrmecobius_fasciatus__numbat__HLmyrFas1 Myrmecobius fasciatus numbat 55782 Mammalia; Theria; Metatheria; Dasyuromorphia; Myrmecobiidae; Myrmecobius HLmyrFas1 DNA Zoo Consortium DNA Zoo Consortium 2022-05-23 18380 321462950 -1 -1 -1 Thylacinus_cynocephalus__Tasmanian_wolf__HLthyCyno2__GCA_007646695.3 Thylacinus cynocephalus Tasmanian wolf thylacine,Tasmanian tiger,Didelphis cynocephala 9275 Mammalia; Theria; Metatheria; Dasyuromorphia; Thylacinidae; Thylacinus HLthyCyno2 GCA_007646695.3 NCBI UniMelb_ThyCyn2.0_hybrid_assembly Chromosome 2022-04-04 The University of Melbourne 15023 629085701 10178 1738 3280 Didelphis_virginiana__North_American_opossum__HLdidVir1 Didelphis virginiana North American opossum Didelphis marsupialis virginiana,Virginia opossum 9267 Mammalia; Theria; Metatheria; Didelphimorphia; Didelphidae; Didelphinae; Didelphis HLdidVir1 DNA Zoo Consortium DNA Zoo Consortium 2020-09-03 36692 245356608 -1 -1 -1 Gracilinanus_agilis__Agile_Gracile_Mouse_Opossum__HLgraAgi1__GCA_016433145.1 Gracilinanus agilis Agile Gracile Mouse Opossum 191870 Mammalia; Theria; Metatheria; Didelphimorphia; Didelphidae; Didelphinae; Gracilinanus HLgraAgi1 GCA_016433145.1 NCBI AgileGrace Chromosome 2020-12-29 Nanjing Normal University 73170 683521856 -1 -1 -1 Monodelphis_domestica__gray_short-tailed_opossum__HLmonDom6__GCF_027887165.1 Monodelphis domestica gray short-tailed opossum Didelphys domestica 13616 Mammalia; Theria; Metatheria; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis HLmonDom6 GCF_027887165.1 NCBI mMonDom1.pri Chromosome 2023-01-18 Vertebrate Genomes Project 3910714 538302405 -1 -1 -1 Lagorchestes_hirsutus__rufous_hare-wallaby__HLlagHir1__GCA_028533205.1 Lagorchestes hirsutus rufous hare-wallaby 65632 Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes HLlagHir1 GCA_028533205.1 DNA Zoo Consortium 2022-07-13 56982 401333761 -1 -1 -1 Macropus_fuliginosus__western_gray_kangaroo__HLmacFul1__GCA_028583105.1 Macropus fuliginosus western gray kangaroo 9316 Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Macropus HLmacFul1 GCA_028583105.1 DNA Zoo Consortium 2020-09-15 29932 341276260 -1 -1 -1 Macropus_giganteus__eastern_gray_kangaroo__HLmacGig1__GCA_028627215.1 Macropus giganteus eastern gray kangaroo 9317 Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Macropus HLmacGig1 GCA_028627215.1 DNA Zoo Consortium 2020-09-04 41233 392871110 -1 -1 -1 Notamacropus_eugenii__Tammar_wallaby__HLnotEuge4__GCF_028372415.1 Notamacropus eugenii Tammar wallaby Macropus eugenii,Kangurus eugenii 9315 Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Notamacropus HLnotEuge4 GCF_028372415.1 NCBI mMacEug1.pri_v2 Chromosome 2023-02-06 Vertebrate Genomes Project 15255043 489668034 NULL NULL NULL Gymnobelideus_leadbeateri__Leadbeaters_possum__HLgymLea2 Gymnobelideus leadbeateri Leadbeaters possum 38618 Mammalia; Theria; Metatheria; Diprotodontia; Petauridae; Gymnobelideus HLgymLea2 DNA Zoo Consortium DNA Zoo Consortium 2021-02-02 493667 317956571 -1 -1 -1 Petaurus_breviceps_papuanus__Sugar_glider__HLpetBrevPap1__GCF_028583685.1 Petaurus breviceps papuanus Sugar glider Australian sugar glider,Petaurista breviceps,Petaurus sp. CYF-2022,Petaurus sp. PSGF00001 3040969 Mammalia; Theria; Metatheria; Diprotodontia; Petauridae; Petaurus; Petaurus breviceps HLpetBrevPap1 GCF_028583685.1 NCBI PetGlider_PUasm1.0 Scaffold 2023-02-10 Princeton University 69635 28187009 11807 1250 2139 Phalanger_gymnotis__ground_cuscus__HLphaGym1__GCA_028646595.1 Phalanger gymnotis ground cuscus 65615 Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Phalanger HLphaGym1 GCA_028646595.1 DNA Zoo Consortium 2020-08-24 27735 353051754 -1 -1 -1 Trichosurus_vulpecula__common_brushtail__HLtriVul1__GCA_011100635.1 Trichosurus vulpecula common brushtail common brush-tailed possum,silver-gray brushtail possum 9337 Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Trichosurus HLtriVul1 GCA_011100635.1 NCBI mTriVul1.pri Chromosome 2020-03-10 Vertebrate Genomes Project 4314688 442560073 -1 -1 -1 Phascolarctos_cinereus__Koala__HLphaCine3__GCA_003287225.2 Phascolarctos cinereus Koala Lipurus cinereus 38626 Mammalia; Theria; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos HLphaCine3 GCA_003287225.2 NCBI phaCin_HiC Scaffold 2022-12-12 The Earlham Institute 11399805 428240489 NULL NULL NULL Bettongia_gaimardi__Tasmanian_bettong__HLbetGaim1A__GCA_050230965.1 Bettongia gaimardi Tasmanian bettong Kangurus gaimardi 223568 Mammalia; Theria; Metatheria; Diprotodontia; Potoroidae; Bettongia HLbetGaim1A GCA_050230965.1 NCBI bettong.v1.2.hap1 Scaffold 2025-05-07 The University of Sydney 87363 2927997 11260 1121 2815 Bettongia_penicillata_ogilbyi__woylie__HLbetPenOgi1__GCA_023548195.1 Bettongia penicillata ogilbyi woylie brush-tailed bettong 881300 Mammalia; Theria; Metatheria; Diprotodontia; Potoroidae; Bettongia; Bettongia penicillata HLbetPenOgi1 GCA_023548195.1 NCBI mBetpen1.pri.20210916 Scaffold 2022-05-25 The University of Sydney 1995330 6939976 -1 -1 -1 Potorous_gilbertii__Gilberts_potoroo__HLpotGil1__GCA_028658325.1 Potorous gilbertii Gilberts potoroo Potorous gilberti 173936 Mammalia; Theria; Metatheria; Diprotodontia; Potoroidae; Potorous HLpotGil1 GCA_028658325.1 DNA Zoo Consortium 2022-07-14 45777 557804701 -1 -1 -1 Pseudocheirus_occidentalis__Western_ringtail_oppossum__HLpseOcc1__GCA_028646575.1 Pseudocheirus occidentalis Western ringtail oppossum Pseudocheirus peregrinus occidentalis,Ngwayir 656515 Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Pseudocheirus HLpseOcc1 GCA_028646575.1 DNA Zoo Consortium 2020-09-15 24154 213462136 -1 -1 -1 Pseudochirops_corinnae__golden_ringtail_possum__HLpseCor1__GCA_028646515.1 Pseudochirops corinnae golden ringtail possum 65629 Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Pseudochirops HLpseCor1 GCA_028646515.1 DNA Zoo Consortium 2020-09-07 26628 209248263 -1 -1 -1 Pseudochirops_cupreus__coppery_ringtail_possum__HLpseCup1__GCA_028627135.1 Pseudochirops cupreus coppery ringtail possum Pseudocheirus cupreus 37702 Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Pseudochirops HLpseCup1 GCA_028627135.1 DNA Zoo Consortium 2020-09-15 27606 425237964 -1 -1 -1 Vombatus_ursinus__common_wombat__HLvomUrs1__GCA_900497805.2 Vombatus ursinus common wombat coarse-haired wombat 29139 Mammalia; Theria; Metatheria; Diprotodontia; Vombatidae; Vombatus HLvomUrs1 GCA_900497805.2 NCBI bare-nosed wombat genome assembly Scaffold 2018-12-10 MRC Institute of Genetics and Molecular Medicine, University of Edinburgh 113054 28503419 -1 -1 -1 Dromiciops_gliroides__monito_del_monte__HLdroGli1__GCF_019393635.1 Dromiciops gliroides monito del monte Dromiciops australis 33562 Mammalia; Theria; Metatheria; Microbiotheria; Microbiotheriidae; Dromiciops HLdroGli1 GCF_019393635.1 NCBI mDroGli1.pri Chromosome 2021-08-03 Vertebrate Genomes Project 38230856 670775900 -1 -1 -1 Notoryctes_typhlops__Marsupial_mole__HLnotTyph2__GCA_048126345.2 Notoryctes typhlops Marsupial mole Psammoryctes typhlops 37699 Mammalia; Theria; Metatheria; Notoryctemorphia; Notoryctidae; Notoryctes HLnotTyph2 GCA_048126345.2 NCBI mNotTyp1.pri Chromosome 2026-01-23 Oz Mammals Genomics 84282059 357300764 12046 1574 1576 Lestoros_inca__Incan_shrew_opossum__HLlesInca1A__GCA_054644205.1 Lestoros inca Incan shrew opossum Orolestes inca 42731 Mammalia; Theria; Metatheria; Paucituberculata; Caenolestidae; Lestoros HLlesInca1A GCA_054644205.1 NCBI mLesInc1.hap1 Chromosome 2026-01-22 Vertebrate Genomes Project 11940304 853182845 12330 1425 1441 Macrotis_lagotis__Bilby__HLmacLag1__GCF_037893015.1 Macrotis lagotis Bilby Perameles lagotis 92651 Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Macrotis HLmacLag1 GCF_037893015.1 NCBI bilby.v1.9.chrom.fasta Chromosome 2024-04-04 The University of Sydney 1227456 343853051 NULL NULL NULL Perameles_gunnii__Eastern_barred_bandicoot__HLperGunn1__GCA_056321495.1 Perameles gunnii Eastern barred bandicoot 37737 Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Perameles HLperGunn1 GCA_056321495.1 NCBI mPerGun1.2_20251003 Chromosome 2026-03-25 University of Sydney 2668961 722434515 11383 1936 1877 Caretta_caretta__Loggerhead_turtle__HLcarCare1A__GCF_965140235.1 Caretta caretta Loggerhead turtle Testudo caretta,loggerhead,red sea turtle 8467 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta HLcarCare1A GCF_965140235.1 NCBI rCarCar1.hap1 Chromosome 2025-02-13 Vertebrate Genomes Project 124322749 137541926 NULL NULL NULL Chelonia_mydas__Green_sea_turtle__HLcheMyd3__GCF_015237465.2 Chelonia mydas Green sea turtle green seaturtle,Chelonia midas,Testudo mydas,Chelonia mydas caranigra 8469 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia HLcheMyd3 GCF_015237465.2 NCBI rCheMyd1.pri.v2 Chromosome 2021-07-15 Vertebrate Genomes Project 39415510 134428053 -1 -1 -1 Eretmochelys_imbricata__Hawksbill_sea_turtle__HLereImbr1A__GCF_965152235.1 Eretmochelys imbricata Hawksbill sea turtle hawksbill turtle,Testudo imbricata,Chelone imbricata 27787 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Eretmochelys HLereImbr1A GCF_965152235.1 NCBI rEreImb1.hap1 Chromosome 2025-04-10 Vertebrate Genomes Project 80323000 136542973 NULL NULL NULL Lepidochelys_kempii__Atlantic_ridley__HLlepKemp1A__GCA_965140285.1 Lepidochelys kempii Atlantic ridley Lepidochelys kempi,Thalassochelys kempii,Kemp's ridley sea turtle 8472 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Lepidochelys HLlepKemp1A GCA_965140285.1 NCBI rLepKem1.hap1 Chromosome 2025-03-26 Vertebrate Genomes Project 52784435 136730895 NULL NULL NULL Lepidochelys_olivacea__Pacific_ridley__HLlepOliv1A__GCA_965140295.1 Lepidochelys olivacea Pacific ridley olive ridley sea turtle,Chelonia olivacea 27788 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Lepidochelys HLlepOliv1A GCA_965140295.1 NCBI rLepOli2.hap1 Chromosome 2025-02-13 Vertebrate Genomes Project 91320439 137258246 NULL NULL NULL Natator_depressus__Flatback_sea_turtle__HLnatDepr1A__GCF_965152275.1 Natator depressus Flatback sea turtle Australian flatback,Chelonia depressa 27790 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Natator HLnatDepr1A GCF_965152275.1 NCBI rNatDep2.hap1 Chromosome 2025-02-16 Vertebrate Genomes Project 77014821 134157645 NULL NULL NULL Dermochelys_coriacea__leatherback_sea_turtle__HLderCor2__GCF_009764565.3 Dermochelys coriacea leatherback sea turtle Testudo coriacea 27794 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys HLderCor2 GCF_009764565.3 NCBI rDerCor1.pri.v4 Chromosome 2021-08-25 G10K 7029801 137568771 -1 -1 -1 Chelydra_serpentina__Common_snapping_turtle__HLcheSerp3__GCA_037349315.2 Chelydra serpentina Common snapping turtle snapping turtle,Testudo serpentina,Chelydra serpentina serpentina 8475 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Chelydridae; Chelydra HLcheSerp3 GCA_037349315.2 NCBI rCheSer1_p1.2 Scaffold 2025-07-18 Canada's national platform for genome sequencing and analysis 49649935 138873281 NULL NULL NULL Macrochelys_suwanniensis__Suwannee_snapping_turtle__HLmacSuwa1A__GCA_033296515.1 Macrochelys suwanniensis Suwannee snapping turtle 3026461 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Chelydridae; Macrochelys HLmacSuwa1A GCA_033296515.1 NCBI rMacSuw1.hap1 Chromosome 2023-11-06 Vertebrate Genomes Project 43882550 139680232 NULL NULL NULL Dermatemys_mawii__Hickatee__HLderMaw2__GCA_007922305.1 Dermatemys mawii Hickatee 55550 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Dermatemydidae; Dermatemys HLderMaw2 GCA_007922305.1 NCBI Dermatemys_mawii-1.0 Scaffold 2019-08-05 McDonnell Genome Institute - Washington University School of Medicine 183958 34365009 -1 -1 -1 Dermatemys_mawii__Hickatee__HLderMawi3A__GCA_054099655.1 Dermatemys mawii Hickatee 55550 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Dermatemydidae; Dermatemys HLderMawi3A GCA_054099655.1 NCBI rDerMaw1.hap1 Chromosome 2025-12-18 Vertebrate Genomes Project 57121583 112986257 NULL NULL NULL Staurotypus_triporcatus__Mexican_musk_turtle__HLstaTrip1__GCA_044707075.1 Staurotypus triporcatus Mexican musk turtle Terrapene triporcata 55537 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Kinosternidae; Staurotypus HLstaTrip1 GCA_044707075.1 NCBI ASM4470707v1 Chromosome 2024-11-13 Iowa State University 16372 111335768 NULL NULL NULL Sternotherus_odoratus__Common_musk_turtle__HLsteOdor1__GCA_032164245.1 Sternotherus odoratus Common musk turtle Testudo odorata,Kinosternon odoratus 142480 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelydroidea; Kinosternidae; Sternotherus HLsteOdor1 GCA_032164245.1 NCBI rSteOdo2_p1.0 Scaffold 2023-09-29 Canada's Genomic Enterprise 17031157 108345705 NULL NULL NULL Actinemys_marmorata__Northwestern_pond_turtle__HLactMarm2__GCA_022086475.1 Actinemys marmorata Northwestern pond turtle Emys marmorata,Clemmys marmorata,Western pond turtle 335395 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Actinemys HLactMarm2 GCA_022086475.1 NCBI rActMar1.p Scaffold 2022-02-09 UCLA 75081387 146229595 NULL NULL NULL Actinemys_pallida__Southwestern_pond_turtle__HLactPall1__GCA_023634205.1 Actinemys pallida Southwestern pond turtle Clemmys marmorata pallida,Actinemys marmorata pallida,Emys marmorata pallida,Emys pallida 1485138 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Actinemys HLactPall1 GCA_023634205.1 NCBI rActPal1.0.p Scaffold 2022-06-01 UCLA 93983910 140349533 NULL NULL NULL Chrysemys_picta_bellii__Western_painted_turtle__HLchrPictBel5__GCF_011386835.1 Chrysemys picta bellii Western painted turtle Chrysemys picta subsp. bellii,Trachemys picta,Chrysemys bellii,Painted turtle,Testudo picta 8478 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys; Chrysemys picta HLchrPictBel5 GCF_011386835.1 NCBI ASM1138683v2 Chromosome 2023-09-08 St. Louis University 13370154 133555881 NULL NULL NULL Chrysemys_picta_marginata__Midland_painted_turtle__HLchrPictMar5__GCA_037418315.2 Chrysemys picta marginata Midland painted turtle Trachemys picta,Testudo picta,Painted turtle,Chrysemys picta subsp. marginata 391339 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys; Chrysemys picta HLchrPictMar5 GCA_037418315.2 NCBI rChrPic1_p1.2 Chromosome 2025-08-18 Canada's Genomic Enterprise 51334297 146520651 NULL NULL NULL Clemmys_guttata__Spotted_turtle__HLcleGutt1__GCA_040208395.2 Clemmys guttata Spotted turtle Testudo guttata 85608 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Clemmys HLcleGutt1 GCA_040208395.2 NCBI rCleGut1_p1.2 Scaffold 2025-07-24 Canada's national platform for genome sequencing and analysis 108421626 147840555 NULL NULL NULL Deirochelys_reticularia_miaria__Western_chicken_turtle__HLdeiRetiMia1__GCA_048301635.1 Deirochelys reticularia miaria Western chicken turtle Testudo reticularia 2804327 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Deirochelys; Deirochelys reticularia HLdeiRetiMia1 GCA_048301635.1 NCBI ASM4830163v1 Contig 2025-03-03 Purdue University 83018800 83018800 NULL NULL NULL Emydoidea_blandingii__Blandings_turtle__HLemyBlan1__GCA_036785055.1 Emydoidea blandingii Blandings turtle Cistudo blandingii,Emys blandingii 85613 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Emydoidea HLemyBlan1 GCA_036785055.1 NCBI rEmyBla1_p1.0 Scaffold 2024-02-23 Canada's Genomic Enterprise 43111614 148530947 NULL NULL NULL Emys_orbicularis__European_pond_turtle__HLemyOrbi1A__GCF_028017835.1 Emys orbicularis European pond turtle Testudo orbicularis 82168 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Emys HLemyOrbi1A GCF_028017835.1 NCBI rEmyOrb1.hap1 Chromosome 2023-01-30 Vertebrate Genomes Project 91255289 146456333 NULL NULL NULL Glyptemys_insculpta__Wood_turtle__HLglyInsc1__GCA_032172135.1 Glyptemys insculpta Wood turtle Clemmys insculpta,Testudo insculpta 335392 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Glyptemys HLglyInsc1 GCA_032172135.1 NCBI rGlyIns1_p1.0 Scaffold 2023-09-28 Canada's Genomic Enterprise 95749198 144216551 NULL NULL NULL Graptemys_geographica__Map_turtle__HLgraGeog1__GCA_037349215.2 Graptemys geographica Map turtle Testudo geographica 8481 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Graptemys HLgraGeog1 GCA_037349215.2 NCBI rGraGeo1_p1.2 Chromosome 2025-07-18 Canada's national platform for genome sequencing and analysis 83656063 145729234 NULL NULL NULL Malaclemys_terrapin_centrata__Diamondback_terrapin__HLmalTerrCen2__GCA_037113585.1 Malaclemys terrapin centrata Diamondback terrapin Testudo centrata,terrapin,Testudo terrapin 1087311 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Malaclemys; Malaclemys terrapin HLmalTerrCen2 GCA_037113585.1 NCBI ASM3711358v1 Chromosome 2024-03-13 Hainan Normal University 63948927 143749486 NULL NULL NULL Malaclemys_terrapin_pileata__Diamondback_terrapin__HLmalTerrPil2A__GCF_027887155.1 Malaclemys terrapin pileata Diamondback terrapin terrapin,Emys pileata,Testudo terrapin 2991368 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Malaclemys; Malaclemys terrapin HLmalTerrPil2A GCF_027887155.1 NCBI rMalTer1.hap1 Chromosome 2023-01-18 Vertebrate Genomes Project 75591180 144565223 NULL NULL NULL Terrapene_carolina_triunguis__Three-toed_box_turtle__HLterCarTri1__GCF_002925995.2 Terrapene carolina triunguis Three-toed box turtle Terrapene triunguis,Cistudo triunguis,Cistudo carolina,common box turtle,Testudo carolina,Terrapene mexicana triunguis,Emys kinosternoides 2587831 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene HLterCarTri1 GCF_002925995.2 NCBI T_m_triunguis-2.0 Scaffold 2018-09-21 McDonnell Genome Institute - Washington University School of Medicine 76614 24249581 -1 -1 -1 Trachemys_scripta_elegans__red-eared_slider_turtle__HLtraScrEle1__GCF_013100865.1 Trachemys scripta elegans red-eared slider turtle dime-store turtle,Chrysemys scripta elegans,red-eared slider,Pseudemys scripta,Testudo scripta,Pseudemys scripta elegans,Emys elegans,slider turtle,Chrysemys scripta 31138 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys; Trachemys scripta HLtraScrEle1 GCF_013100865.1 NCBI CAS_Tse_1.0 Chromosome 2020-05-15 California Academy of Sciences 204575 140411086 -1 -1 -1 Pangshura_tecta__Indian_roofed_turtle__HLpanTect1A__GCA_045781095.1 Pangshura tecta Indian roofed turtle Emys tecta,Kachuga tecta 260642 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Batagurinae; Pangshura HLpanTect1A GCA_045781095.1 NCBI rPanTec1.hap1 Chromosome 2024-12-06 Vertebrate Genomes Project 54152134 136649681 NULL NULL NULL Cuora_amboinensis__Amboina_box_turtle__HLcuoAmb1__GCA_004028625.2 Cuora amboinensis Amboina box turtle 74909 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Cuora HLcuoAmb1 GCA_004028625.2 NCBI ASM402862v2 Scaffold 2019-03-22 McDonnell Genome Institute - Washington University School of Medicine 47152 247606 -1 -1 -1 Cuora_mccordi__McCords_box_turtle__HLcuoMcc1__GCA_003846335.1 Cuora mccordi McCords box turtle 241437 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Cuora HLcuoMcc1 GCA_003846335.1 NCBI ASM384633v1 Scaffold 2018-11-28 McDonnell Genome Institute - Washington University School of Medicine 74338 32628679 -1 -1 -1 Mauremys_mutica__Yellowpond_turtle__HLmauMuti1__GCF_020497125.1 Mauremys mutica Yellowpond turtle Emys muticus,Geoclemmys mutica 74926 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys HLmauMuti1 GCF_020497125.1 NCBI ASM2049712v1 Chromosome 2021-10-14 Institute of Zoology, Guangdong Academy of Science 15010728 135065811 NULL NULL NULL Mauremys_reevesii__Reevess_turtle__HLmauRee1__GCF_016161935.1 Mauremys reevesii Reevess turtle Chinemys reevesi,Geoclemys reevesii,Mauremys reevesi,Chinemys reevesii,Geoclemys reevessi,Emys reevesii 260615 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys HLmauRee1 GCF_016161935.1 NCBI ASM1616193v1 Chromosome 2020-12-22 Anhui normal university 33352699 130473029 -1 -1 -1 Rhinoclemmys_areolata__Furrowed_wood_turtle__HLrhiAreo1__GCA_044758505.1 Rhinoclemmys areolata Furrowed wood turtle Emys areolata 260652 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Rhinoclemmys HLrhiAreo1 GCA_044758505.1 NCBI ASM4475850v1 Scaffold 2024-11-10 Iridian Genomes 12160 117835617 NULL NULL NULL Vijayachelys_silvatica__Cochin_Forest_cane_turtle__HLvijSilv1A__GCA_060712455.1 Vijayachelys silvatica Cochin Forest cane turtle Heosemys silvatica,Geoemyda silvatica 332089 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Vijayachelys HLvijSilv1A GCA_060712455.1 NCBI rVijSil1.1.hap1 Chromosome 2026-09-01 University of Copenhagen 47898820 144247588 NULL NULL NULL Platysternon_megacephalum__big-headed_turtle__HLplaMeg1__GCA_003942145.1 Platysternon megacephalum big-headed turtle Platysternon macrocephalus 55544 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Platysternidae; Platysternon HLplaMeg1 GCA_003942145.1 NCBI ASM394214v1 Scaffold 2018-12-12 Novogene 213602 7221511 -1 -1 -1 Platysternon_megacephalum__Big-headed_turtle__HLplaMega2A__GCA_057946115.1 Platysternon megacephalum Big-headed turtle Platysternon macrocephalus 55544 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Platysternidae; Platysternon HLplaMega2A GCA_057946115.1 NCBI rPlaMeg1.hap1 Chromosome 2026-06-04 Vertebrate Genomes Project 72833130 144819021 NULL NULL NULL Aldabrachelys_gigantea__Aldabra_giant_tortoise__HLaldGiga1__GCA_026122505.1 Aldabrachelys gigantea Aldabra giant tortoise Geochelone gigantea,Testudo gigantea,Aldabra tortoise,Dipsochelys dussumieri,Aldabrachelys dussumieri,Aldabrachelys elephantina 167804 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Aldabrachelys HLaldGiga1 GCA_026122505.1 NCBI AldGig_1.0 Chromosome 2022-11-15 University of Zurich 58656949 148569599 NULL NULL NULL Chelonoidis_abingdonii__Abingdon_island_giant_tortoise__HLcheAbi1__GCF_003597395.1 Chelonoidis abingdonii Abingdon island giant tortoise Chelonoidis nigra abingdonii,Geochelone nigra abingdoni,Geochelone nigra ephippium,Testudo abingdonii,Geochelone nigra abigdonii,Chelonoidis abingdoni 106734 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis; Chelonoidis nigra species complex HLcheAbi1 GCF_003597395.1 NCBI ASM359739v1 Scaffold 2018-09-25 Universidad de Oviedo 73186 1277207 -1 -1 -1 Gopherus_agassizii__Agassizs_desert_tortoise__HLgopAga1__GCA_002896415.1 Gopherus agassizii Agassizs desert tortoise Gopherus agassizi,desert tortoise,Gopherus polyphemus agassizii,Xerobates agassizii 38772 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus HLgopAga1 GCA_002896415.1 NCBI ASM289641v1 Scaffold 2018-01-24 Arizona State University 43735 228109 -1 -1 -1 Gopherus_evgoodei__Goodes_thornscrub_tortoise__HLgopEvg1__GCF_007399415.2 Gopherus evgoodei Goodes thornscrub tortoise 1825980 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus HLgopEvg1 GCF_007399415.2 NCBI rGopEvg1_v1.p Chromosome 2019-07-25 Vertebrate Genomes Project 13026736 147425149 -1 -1 -1 Gopherus_flavomarginatus__Mexican_gopher_tortoise__HLgopFlav1__GCF_025201925.1 Gopherus flavomarginatus Mexican gopher tortoise 286002 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus HLgopFlav1 GCF_025201925.1 NCBI rGopFla2.mat.asm Chromosome 2022-09-15 Vertebrate Genomes Project 6917139 162938067 NULL NULL NULL Indotestudo_elongata__Elongated_tortoise__HLindElon1A__GCA_050000095.2 Indotestudo elongata Elongated tortoise Yellow-headed tortoise,Geochelone elongata,Testudo elongata 74920 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Indotestudo HLindElon1A GCA_050000095.2 NCBI rIndElo1.hap1 Chromosome 2025-08-19 Vertebrate Genomes Project 107311172 146925146 NULL NULL NULL Testudo_graeca__Mediterranean_spur-thighed_tortoise__HLtesGrae1__GCA_040782865.1 Testudo graeca Mediterranean spur-thighed tortoise 86975 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Testudo HLtesGrae1 GCA_040782865.1 NCBI ASM4078286v1 Chromosome 2024-07-19 Miguel Hernandez University 133608 130162285 NULL NULL NULL Carettochelys_insculpta__Pitted-shelled_turtle__HLcarInsc4__GCF_033958435.1 Carettochelys insculpta Pitted-shelled turtle 44489 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Carettochelyidae; Carettochelys HLcarInsc4 GCF_033958435.1 NCBI ASM3395843v1 Chromosome 2023-11-27 Northwestern Polytechnical University 126464372 130115908 NULL NULL NULL Apalone_spinifera__Spiny_softshell_turtle__HLapaSpin2__GCA_030068395.2 Apalone spinifera Spiny softshell turtle spiny softshell,Trionyx spiniferus 55534 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Apalone HLapaSpin2 GCA_030068395.2 NCBI ASM3006839v2 Chromosome 2025-05-20 Iowa State University 14642 120034057 NULL NULL NULL Apalone_spinifera__Spiny_softshell_turtle__HLapaSpin3__GCA_055691355.1 Apalone spinifera Spiny softshell turtle Trionyx spiniferus,spiny softshell 55534 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Apalone HLapaSpin3 GCA_055691355.1 NCBI ASM5569135v1 Chromosome 2026-03-05 Anhui normal university 79167384 133328498 NULL NULL NULL Chitra_chitra__Asian_narrow-headed_softshell_turtle__HLchiChit1__GCA_052575445.1 Chitra chitra Asian narrow-headed softshell turtle 171799 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Chitra HLchiChit1 GCA_052575445.1 NCBI rChiChi1.pri Chromosome 2025-09-12 Vertebrate Genomes Project 78634236 131477372 NULL NULL NULL Palea_steindachneri__Wattle-necked_softshell_turtle__HLpalStei1__GCA_054135685.1 Palea steindachneri Wattle-necked softshell turtle Trionyx steindachneri,Pelea steindachneri,Amyda steindachneri 161718 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Palea HLpalStei1 GCA_054135685.1 NCBI ASM5413568v1 Chromosome 2025-12-23 Anhui normal university 123794365 131416804 NULL NULL NULL Pelochelys_cantorii__Cantors_giant_softshell_turtle__HLpelCant1__GCA_032595735.1 Pelochelys cantorii Cantors giant softshell turtle frog-faced softshell turtle 171793 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelochelys HLpelCant1 GCA_032595735.1 NCBI ASM3259573v1 Chromosome 2023-10-12 Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences 41440143 120169148 NULL NULL NULL Pelodiscus_sinensis__Chinese_soft-shelled_turtle__HLpelSine2A__GCA_051311755.1 Pelodiscus sinensis Chinese soft-shelled turtle Chinese softshell turtle,Trionyx sinensis 13735 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus HLpelSine2A GCA_051311755.1 NCBI rPelSin1.hap1 Scaffold 2025-07-14 Vertebrate Genomes Project 69200595 128057952 NULL NULL NULL Pelodiscus_sinensis__Chinese_soft-shelled_turtle__HLpelSine3__GCA_052426305.1 Pelodiscus sinensis Chinese soft-shelled turtle Chinese softshell turtle,Trionyx sinensis 13735 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus HLpelSine3 GCA_052426305.1 NCBI ASM5242630v1 Complete Genome 2025-09-03 Hunan Agricultural University 132537830 132537830 NULL NULL NULL Rafetus_swinhoei__Swinhoes_soft-shelled_turtle__HLrafSwi1__GCA_019425775.1 Rafetus swinhoei Swinhoes soft-shelled turtle Oscaria swinhoei,Rafetus leloii,Pelochelys maculatus,Rafetus vietnamensis,Pelochelys taihuensis,Yuen maculatus,Rafetus swinhoe 904230 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Rafetus HLrafSwi1 GCA_019425775.1 NCBI ASM1942577v1 Chromosome 2021-07-30 Center for Ecological and Environmental Sciences 30963999 131976892 -1 -1 -1 Trionyx_triunguis__African_softshell_turtle__HLtriTriu1__GCA_977009205.1 Trionyx triunguis African softshell turtle 101491 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Trionyx HLtriTriu1 GCA_977009205.1 NCBI rTriTgu1.1 Chromosome 2025-10-19 NBIS (National Bioinformatics Infrastructure Sweden) 80362655 137054899 NULL NULL NULL Chelodina_parkeri__Parkers_snake-necked_turtle__HLchePar1 Chelodina parkeri Parkers snake-necked turtle Macrochelodina parkeri 571342 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Chelodina HLchePar1 MPI-CBG MPI-CBG 2021-03-28 46528440 120435958 -1 -1 -1 Elseya_novaeguineae__New_Guinea_snapping_turtle__HLelsNov1A Elseya novaeguineae New Guinea snapping turtle Myuchelys novaeguineae,Emydura novae-guineae,Platemys novae-guineae 904238 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Elseya HLelsNov1A MPI-CBG MPI-CBG 2022-10-10 36337756 122738801 -1 -1 -1 Elseya_novaeguineae__New_Guinea_snapping_turtle__HLelsNov1B Elseya novaeguineae New Guinea snapping turtle Platemys novae-guineae,Emydura novae-guineae,Myuchelys novaeguineae 904238 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Elseya HLelsNov1B MPI-CBG MPI-CBG 2022-10-31 42328884 122474839 -1 -1 -1 Emydura_subglobosa__Red-bellied_short-necked_turtle__HLemySub1__GCA_007922225.1 Emydura subglobosa Red-bellied short-necked turtle Euchelymys subglobosa 251359 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Emydura HLemySub1 GCA_007922225.1 NCBI Emydura_subglobosa-1.0 Scaffold 2019-08-05 McDonnell Genome Institute - Washington University School of Medicine 350989 44759016 -1 -1 -1 Emydura_subglobosa__Red-bellied_short-necked_turtle__HLemySubg2__GCA_054346155.1 Emydura subglobosa Red-bellied short-necked turtle Euchelymys subglobosa 251359 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Emydura HLemySubg2 GCA_054346155.1 NCBI ASM5434615v1 Chromosome 2026-01-05 Anhui normal university 99727220 122085354 NULL NULL NULL Emydura_macquarii_macquarii__Murray_river_turtle__HLemyMacqMac1__GCF_026122565.2 Emydura macquarii macquarii Murray river turtle Emys macquaria macquaria,Emydura macquarrii,Chelymys macquaria,Emydura signata,Emys macquaria 1129001 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Emydura; Emydura macquarii HLemyMacqMac1 GCF_026122565.2 NCBI CSIRO-AGI_Emac_v2 Contig 2024-07-25 CSIRO Applied Genomics Initiative 17066353 17066353 NULL NULL NULL Hydromedusa_tectifera__Argentine_snake-necked_turtle__HLhydTec1 Hydromedusa tectifera Argentine snake-necked turtle 61327 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Hydromedusa HLhydTec1 MPI-CBG MPI-CBG 2021-06-08 63372439 118569001 -1 -1 -1 Mesoclemmys_tuberculata__Tuberculate_toadhead_turtle__HLmesTub1__GCA_007922155.1 Mesoclemmys tuberculata Tuberculate toadhead turtle Batrachemys tuberculata,Rhinemys tuberculata,Mesoclemmys tuberculatus 904206 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Mesoclemmys HLmesTub1 GCA_007922155.1 NCBI Mesoclemmys_tuberculata-1.0 Scaffold 2019-08-05 McDonnell Genome Institute - Washington University School of Medicine 146430 46415247 -1 -1 -1 Myuchelys_georgesi__Bellinger_river_turtle__HLmyuGeor1__GCA_040894355.2 Myuchelys georgesi Bellinger river turtle Wollumbinia georgesi,Elseya georgesi,Bellinger River snapping turtle 1041117 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Chelidae; Myuchelys HLmyuGeor1 GCA_040894355.2 NCBI rMyuGeo1.pri Chromosome 2025-02-07 The University of Sydney 56181416 123447689 NULL NULL NULL Pelomedusa_somalica__Somali_helmeted_turtle__HLpelSom1 Pelomedusa somalica Somali helmeted turtle Pelomedusa sp. CK-2014f 1488670 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Pelomedusidae; Pelomedusa HLpelSom1 MPI-CBG MPI-CBG 2021-09-06 65562768 217994614 -1 -1 -1 Pelomedusa_subrufa__African_helmeted_turtle__HLpelSubr1__GCA_044758295.1 Pelomedusa subrufa African helmeted turtle Testudo subrufa,Pelomedusa galeata damarensis 44522 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Pelomedusidae; Pelomedusa HLpelSubr1 GCA_044758295.1 NCBI ASM4475829v1 Scaffold 2024-11-10 Iridian Genomes 11604 103230343 NULL NULL NULL Pelusios_castaneus__West_African_mud_turtle__HLpelCas1__GCA_007922175.1 Pelusios castaneus West African mud turtle Pelusios subniger castaneus,Emys castanea 367368 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Pelomedusidae; Pelusios HLpelCas1 GCA_007922175.1 NCBI Pelusios_castaneus-1.0 Scaffold 2019-08-01 McDonnell Genome Institute - Washington University School of Medicine 74864 14055032 -1 -1 -1 Erymnochelys_madagascariensis__Madagascan_big-headed_turtle__HLeryMad1 Erymnochelys madagascariensis Madagascan big-headed turtle Dumerilia madagascariensis 44520 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Podocnemididae; Erymnochelys HLeryMad1 MPI-CBG MPI-CBG 2021-03-28 68097831 314632115 -1 -1 -1 Peltocephalus_dumerilianus__big-headed_amazon_river_turtle__HLpelDum1 Peltocephalus dumerilianus big-headed amazon river turtle Peltocephalus durmerilliana,Emys dumeriliana,Peltocephalus durmerilianus,Peltocephalus dumeriliana 329145 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Podocnemididae; Peltocephalus HLpelDum1 MPI-CBG MPI-CBG 2021-07-29 56472560 389996799 -1 -1 -1 Podocnemis_expansa__Arrau_turtle__HLpodExpa2A__GCA_045364815.1 Podocnemis expansa Arrau turtle Emys expansa 44507 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Podocnemididae; Podocnemis HLpodExpa2A GCA_045364815.1 NCBI rPodExp1 haplotype 2 Chromosome 2024-12-02 Genomics of Brazilian Biodiversity 24087131 300517188 NULL NULL NULL Podocnemis_expansa__Arrau_turtle__HLpodExpa2B__GCA_045364785.1 Podocnemis expansa Arrau turtle Emys expansa 44507 Sauropsida; Sauria; Archelosauria; Testudinata; Testudines; Pleurodira; Podocnemididae; Podocnemis HLpodExpa2B GCA_045364785.1 NCBI rPodExp1 haplotype 1 Chromosome 2024-12-02 Genomics of Brazilian Biodiversity 21396530 300404079 NULL NULL NULL Anabas_testudineus__Climbing_perch__HLFanaTest1__GCA_900324465.3 Anabas testudineus Climbing perch Amphiprion testudineus,Antias testudineus,Anthias testudineus 64144 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Anabantoidei; Anabantidae; Anabas HLFanaTest1 GCA_900324465.3 NCBI fAnaTes1.3 Chromosome 2021-04-24 Wellcome Sanger Institute 7055436 25063394 NULL NULL NULL Betta_splendens__Siamese_fighting_fish__HLbetSpl1__GCF_900634795.4 Betta splendens Siamese fighting fish 158456 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Macropodinae; Betta HLbetSpl1 GCF_900634795.4 NCBI fBetSpl5.4 Chromosome 2023-03-10 Wellcome Sanger Institute 2574972 19821211 -1 -1 -1 Macropodus_opercularis__Paradise_fish__HLFmacOper1__GCA_030770545.1 Macropodus opercularis Paradise fish Labrus opercularis 158451 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Macropodinae; Macropodus HLFmacOper1 GCA_030770545.1 NCBI macOpe2 Chromosome 2023-08-21 National Human Genome Research Institute 19217602 19217602 NULL NULL NULL Channa_argus__Northern_snakehead__HLFchaArgu1__GCF_033026475.1 Channa argus Northern snakehead snakehead,Ophiocephalus argus,Ophicephalus argus 215402 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa HLFchaArgu1 GCF_033026475.1 NCBI Channa argus male v1.0 Chromosome 2023-10-25 Pearl River Fisheries Research Institute Chinese Academy of Fishery Sciences 16561385 27733855 NULL NULL NULL Channa_asiatica__Small_snakehead__HLFchaAsia1__GCA_040939885.1 Channa asiatica Small snakehead Gymnotus asiaticus 188929 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa HLFchaAsia1 GCA_040939885.1 NCBI ASM4093988v1 Chromosome 2024-07-29 Wuhan Onemore-tech Co 30602493 32140052 NULL NULL NULL Channa_maculata__Blotched_snakehead__HLFchaMacu1__GCA_020496755.1 Channa maculata Blotched snakehead Ophiocephalus maculatus,Bostrychus maculatus 188791 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa HLFchaMacu1 GCA_020496755.1 NCBI ASM2049675v1 Chromosome 2021-10-14 Chinese Academy of Sciences 21727292 28367461 NULL NULL NULL Channa_striata__Snakehead_murrel__HLFchaStri1__GCA_033026295.1 Channa striata Snakehead murrel chevron snakehead,striped snakehead,banded snakehead,Ophicephalus striatus,Channa stratus 64152 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa HLFchaStri1 GCA_033026295.1 NCBI C.striata _1.0 Chromosome 2023-10-25 Pearl River Fisheries Research Institute, Chinese Academy of Fishery Sciences 13087542 27363151 NULL NULL NULL Mastacembelus_armatus__Zig-zag_eel__HLFmasArma1__GCA_900324485.3 Mastacembelus armatus Zig-zag eel Macrognathus armatus 205130 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Anabantaria; Synbranchiformes; Mastacembeloidei; Mastacembelidae; Mastacembelus HLFmasArma1 GCA_900324485.3 NCBI fMasArm1.3 Chromosome 2021-04-24 Wellcome Sanger Institute 8014513 25090313 NULL NULL NULL Opsanus_beta__Gulf_toadfish__HLFopsBeta1__GCA_040802735.1 Opsanus beta Gulf toadfish Batrachus tau beta 95145 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Batrachoidaria; Batrachoidiformes; Batrachoididae; Batrachoidinae; Opsanus HLFopsBeta1 GCA_040802735.1 NCBI UM_OBeta_2.1 Chromosome 2024-07-22 University of Miami Rosenstiel School of Marine and Atmospheric Science 40030226 98402768 NULL NULL NULL Lates_calcarifer__Barramundi_perch__HLFlatCalc1__GCF_001640805.2 Lates calcarifer Barramundi perch barramundi,Asian seabass,Holocentrus calcarifer 8187 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangaria incertae sedis; Centropomidae; Lates HLFlatCalc1 GCF_001640805.2 NCBI TLL_Latcal_v3 Chromosome 2022-08-01 Temasek Life Sciences Laboratory 1379868 25538952 NULL NULL NULL Eleutheronema_tetradactylum__Indian_salmon__HLFeleTetr1__GCA_046255195.1 Eleutheronema tetradactylum Indian salmon blue threadfin,blue salmon,Polynemus tetradactylus,blind tassel-fish 210139 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangaria incertae sedis; Polynemidae; Eleutheronema HLFeleTetr1 GCA_046255195.1 NCBI ASM4625519v1 Chromosome 2024-12-23 GuangDong Ocean University 21329324 23892743 NULL NULL NULL Polydactylus_sextarius__Blackspot_threadfin__HLFpolSext1__GCA_016801845.1 Polydactylus sextarius Blackspot threadfin Polynemus sextarius 435218 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangaria incertae sedis; Polynemidae; Polydactylus HLFpolSext1 GCA_016801845.1 NCBI ASM1680184v1 Chromosome 2021-02-04 Center for Ecological and Environmental Sciences 18418211 22256062 NULL NULL NULL Toxotes_jaculatrix__Banded_archerfish__HLFtoxJacu1__GCF_017976425.1 Toxotes jaculatrix Banded archerfish northern rifle-fish,Sciaena jaculatrix 941984 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangaria incertae sedis; Toxotidae; Toxotes HLFtoxJacu1 GCF_017976425.1 NCBI fToxJac2.pri Chromosome 2021-04-15 Vertebrate Genomes Project 15555772 26859436 NULL NULL NULL Toxotes_chatareus__Largescale_archerfish__HLFtoxChat1__GCA_016801885.1 Toxotes chatareus Largescale archerfish Coius chatareus 270537 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangaria incertae sedis; Toxotidae; Toxotes HLFtoxChat1 GCA_016801885.1 NCBI ASM1680188v1 Chromosome 2021-02-04 Center for Ecological and Environmental Sciences 8430381 23928265 NULL NULL NULL Decapterus_maruadsi__Japanese_scad__HLFdecMaru1__GCA_030347415.2 Decapterus maruadsi Japanese scad Caranx maruadsi 58220 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangiformes; Carangidae; Decapterus HLFdecMaru1 GCA_030347415.2 NCBI ASM3034741v2 Chromosome 2023-10-17 Xiamen University 13623203 32347610 NULL NULL NULL Seriola_aureovittata__Yellowtail_amberjack__HLFserAure1__GCF_021018895.1 Seriola aureovittata Yellowtail amberjack Seriola lalandi aureovittata 2871759 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangiformes; Carangidae; Seriola HLFserAure1 GCF_021018895.1 NCBI ASM2101889v1 Chromosome 2021-12-02 Yellow Sea Fisheries Research Institute 17994190 28520646 NULL NULL NULL Trachinotus_ovatus__Derbio__HLFtraOvat1__GCA_022709315.2 Trachinotus ovatus Derbio Gasterosteus ovatus 173339 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangiformes; Carangidae; Trachinotus HLFtraOvat1 GCA_022709315.2 NCBI Tov_assembly_3.0 Chromosome 2024-08-13 Chinese Academy of Fishery Sciences 26488240 28467530 NULL NULL NULL Trachurus_trachurus__Atlantic_horse_mackerel__HLFtraTrac1__GCA_905171665.2 Trachurus trachurus Atlantic horse mackerel Scomber trachurus 36212 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangiformes; Carangidae; Trachurus HLFtraTrac1 GCA_905171665.2 NCBI fTraTra1.2 Chromosome 2021-11-26 Wellcome Sanger Institute 6490592 35447499 NULL NULL NULL Echeneis_naucrates__Live_sharksucker__HLFechNauc1__GCA_900963305.2 Echeneis naucrates Live sharksucker 173247 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangiformes; Echeneidae; Echeneis HLFechNauc1 GCA_900963305.2 NCBI fEcheNa1.2 Chromosome 2021-04-24 Wellcome Sanger Institute 12371513 23287306 NULL NULL NULL Remorina_albescens__White_suckerfish__HLFremAlb1__GCA_034769265.1 Remorina albescens White suckerfish Echeneis albescens,Remora albescens 641296 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Carangiformes; Echeneidae; Remorina HLFremAlb1 GCA_034769265.1 NCBI ASM3476926v1 Chromosome 2023-12-29 Ocean University of China 23122051 25658447 NULL NULL NULL Istiophorus_platypterus__Indo-Pacific_sailfish__HLFistPlat1__GCA_016859345.1 Istiophorus platypterus Indo-Pacific sailfish Xiphias platypterus 13575 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Istiophoriformes; Istiophoridae; Istiophorus HLFistPlat1 GCA_016859345.1 NCBI ASM1685934v1 Chromosome 2021-02-12 Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences 11851605 26283175 NULL NULL NULL Xiphias_gladius__Swordfish__HLFxipGlad1__GCF_016859285.1 Xiphias gladius Swordfish 8245 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Istiophoriformes; Xiphiidae; Xiphias HLFxipGlad1 GCF_016859285.1 NCBI ASM1685928v1 Chromosome 2021-02-12 Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences 5252707 29220096 NULL NULL NULL Paralichthys_olivaceus__Japanese_flounder__HLFparOliv1__GCF_024713975.1 Paralichthys olivaceus Japanese flounder bastard halibut,Hippoglossus olivaceus,Paralichthyidae sp. KYJ-2011,false halibut,olive flounder 8255 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys HLFparOliv1 GCF_024713975.1 NCBI ASM2471397v2 Chromosome 2022-08-25 Yellow Sea fisheries Research Institution 24354382 26045262 NULL NULL NULL Hippoglossus_hippoglossus__Atlantic_halibut__HLFhipHipp1__GCF_009819705.1 Hippoglossus hippoglossus Atlantic halibut Pleuronectes hippoglossus 8267 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus HLFhipHipp1 GCF_009819705.1 NCBI fHipHip1.pri Chromosome 2019-12-31 Vertebrate Genomes Project 7020318 26312018 NULL NULL NULL Hippoglossus_stenolepis__Pacific_halibut__HLFhipSten1__GCF_022539355.2 Hippoglossus stenolepis Pacific halibut 195615 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus HLFhipSten1 GCF_022539355.2 NCBI HSTE1.2 Chromosome 2022-03-10 International Pacific Halibut Commission 4638087 27288303 NULL NULL NULL Limanda_limanda__Common_dab__HLFlimLima1__GCF_963576545.1 Limanda limanda Common dab Liopsetta limanda,dab,Pleuronectes limanda 27771 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Limanda HLFlimLima1 GCF_963576545.1 NCBI fLimLim1.1 Chromosome 2023-11-03 WELLCOME SANGER INSTITUTE 3420448 28632645 NULL NULL NULL Platichthys_flesus__European_flounder__HLFplaFles1__GCF_949316205.1 Platichthys flesus European flounder Platicthys flesus,Pleuronectes flesus 8260 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Platichthys HLFplaFles1 GCF_949316205.1 NCBI fPlaFle2.1 Chromosome 2023-04-05 WELLCOME SANGER INSTITUTE 2078972 26770804 NULL NULL NULL Platichthys_stellatus__Starry_flounder__HLFplaStel1__GCA_047651785.1 Platichthys stellatus Starry flounder Pleuronectes stellatus,Platicthys stellatus 195632 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Platichthys HLFplaStel1 GCA_047651785.1 NCBI ASM4765178v1 Chromosome 2025-02-11 Yellow Sea Fisheries Research Institute 10002397 26190500 NULL NULL NULL Pleuronectes_platessa__European_plaice__HLFplePlat1__GCF_947347685.1 Pleuronectes platessa European plaice plaice 8262 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pleuronectes HLFplePlat1 GCF_947347685.1 NCBI fPlePla1.1 Chromosome 2022-11-29 WELLCOME SANGER INSTITUTE 1477112 26648505 NULL NULL NULL Pseudopleuronectes_americanus__Winter_flounder__HLpseAmer2A__GCA_054850875.1 Pseudopleuronectes americanus Winter flounder 1792),Pleuronectes americanus,Pseudopleuronectes americanus (Walbaum 8265 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Pseudopleuronectes HLpseAmer2A GCA_054850875.1 NCBI fPseAme1.hap1 Chromosome 2026-01-30 Vertebrate Genomes Project 2168314 25873033 NULL NULL NULL Verasper_variegatus__Spotted_halibut__HLFverVari1__GCA_026259375.1 Verasper variegatus Spotted halibut Platessa variegata 82366 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Verasper HLFverVari1 GCA_026259375.1 NCBI ASM2625937v1 Chromosome 2022-11-23 Yellow Sea fisheries Research Institution 22761669 24817500 NULL NULL NULL Scophthalmus_maximus__Turbot__HLFscoMaxi1__GCF_022379125.1 Scophthalmus maximus Turbot Rhombus maximus,Pleuronectes maximus,Psetta maxima 52904 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus HLFscoMaxi1 GCF_022379125.1 NCBI ASM2237912v1 Chromosome 2022-02-24 Yellow Sea fisheries Research Institution 25762658 25762658 NULL NULL NULL Solea_senegalensis__Senegalese_sole__HLFsolSene1__GCF_019176455.1 Solea senegalensis Senegalese sole 28829 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea HLFsolSene1 GCF_019176455.1 NCBI IFAPA_SoseM_1 Chromosome 2021-07-09 IFAPA 1188264 26091242 NULL NULL NULL Solea_solea__Common_sole__HLFsolSol1__GCF_958295425.1 Solea solea Common sole Pleuronectes solea,Solea vulgaris 90069 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea HLFsolSol1 GCF_958295425.1 NCBI fSolSol10.1 Chromosome 2023-07-06 WELLCOME SANGER INSTITUTE 2587297 29068826 NULL NULL NULL Lateolabrax_maculatus__Spotted_sea_bass__HLFlatMacu1__GCA_031216445.1 Lateolabrax maculatus Spotted sea bass Labrax maculatus,Holocentrum maculatum 315492 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Acropomatiformes; Lateolabracidae; Lateolabrax HLFlatMacu1 GCA_031216445.1 NCBI YSFRI_Lmacu_1.1 Chromosome 2023-09-07 Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences 27954791 27954791 NULL NULL NULL Pempheris_schomburgkii__Glassy_sweeper__HLFpemScho1A__GCA_054100275.1 Pempheris schomburgkii Glassy sweeper Pempheris schomburgki 1182198 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Acropomatiformes; Pempheridae; Pempheris HLFpemScho1A GCA_054100275.1 NCBI fPemSco2.hap1 Chromosome 2025-12-19 Vertebrate Genomes Project 6822809 29112985 NULL NULL NULL Micropterus_dolomieu__Smallmouth_bass__HLFmicDolo1__GCF_021292245.1 Micropterus dolomieu Smallmouth bass Micropterus velox,smallmouth blackbass 147949 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus HLFmicDolo1 GCF_021292245.1 NCBI ASM2129224v1 Chromosome 2022-01-11 Cornell University 46775 34173225 NULL NULL NULL Enoplosus_armatus__Old_wife__HLFenoArma1A__GCF_043641665.1 Enoplosus armatus Old wife Chaetodon armatus 215367 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Centrarchiformes; Centrarchoidei; Enoplosidae; Enoplosus HLFenoArma1A GCF_043641665.1 NCBI fEnoArm2.hap1 Chromosome 2024-10-30 Ocean Genomes 17101116 25576037 NULL NULL NULL Siniperca_chuatsi__Mandarin_fish__HLFsinChua1__GCF_020085105.1 Siniperca chuatsi Mandarin fish Chinese bass,Chautsi bass,Chinese perch,Perca chuatsi 119488 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca HLFsinChua1 GCF_020085105.1 NCBI ASM2008510v1 Chromosome 2021-09-24 Chinese Academy of Sciences 20478450 30013189 NULL NULL NULL Siniperca_roulei__Slender_mandarinfish__HLFsinRoul1__GCA_047228765.1 Siniperca roulei Slender mandarinfish Coreosiniperca roulei 358392 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca HLFsinRoul1 GCA_047228765.1 NCBI ASM4722876v1 Chromosome 2025-01-28 Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences 30253703 30253703 NULL NULL NULL Siniperca_scherzeri__Leopard_mandarin_fish__HLFsinSche1__GCA_027580175.1 Siniperca scherzeri Leopard mandarin fish Korean perch 228252 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca HLFsinSche1 GCA_027580175.1 NCBI ASM2758017v1 Chromosome 2023-01-09 Sun Yat-sen University 16036871 30486584 NULL NULL NULL Chaetodon_auriga__Threadfin_butterflyfish__HLFchaAuri1A__GCF_051107435.1 Chaetodon auriga Threadfin butterflyfish 39042 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Chaetodontiformes; Chaetodontidae; Chaetodon HLFchaAuri1A GCF_051107435.1 NCBI fChaAug3.hap1 Chromosome 2025-06-26 Vertebrate Genomes Project 25954998 26948870 NULL NULL NULL Chaetodon_trifascialis__Chevron_butterflyfish__HLFchaTrif1A__GCF_039877785.1 Chaetodon trifascialis Chevron butterflyfish 109706 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Chaetodontiformes; Chaetodontidae; Chaetodon HLFchaTrif1A GCF_039877785.1 NCBI fChaTrf1.hap1 Chromosome 2024-05-29 Vertebrate Genomes Project 21327470 29139200 NULL NULL NULL Chelmon_rostratus__Copperband_butterflyfish__HLFcheRost1__GCF_017976325.1 Chelmon rostratus Copperband butterflyfish Chaetodon rostratus 109905 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Chaetodontiformes; Chaetodontidae; Chelmon HLFcheRost1 GCF_017976325.1 NCBI fCheRos1.pri Chromosome 2021-04-15 Vertebrate Genomes Project 16959746 27778429 NULL NULL NULL Cheilinus_undulatus__Humphead_wrasse__HLFcheUndu1__GCF_018320785.1 Cheilinus undulatus Humphead wrasse 241271 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Cheilinus HLFcheUndu1 GCF_018320785.1 NCBI ASM1832078v1 Chromosome 2021-05-12 Shanghai Ocean University 16477222 51466935 NULL NULL NULL Choerodon_schoenleinii__Blackspot_tuskfish__HLFchoScho1__GCA_047301625.1 Choerodon schoenleinii Blackspot tuskfish Cossyphus schoenleinii 241275 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Choerodon HLFchoScho1 GCA_047301625.1 NCBI ASM4730162v1 Chromosome 2025-01-30 Guangdong Ocean University 37536982 38173469 NULL NULL NULL Labroides_dimidiatus__Bluestreak_cleaner_wrasse__HLFlabDimi1__GCA_030710495.1 Labroides dimidiatus Bluestreak cleaner wrasse Cossyphus dimidiatus 241309 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Labroides HLFlabDimi1 GCA_030710495.1 NCBI ASM3071049v1 Chromosome 2023-08-21 The University of Hong Kong 9709478 33588937 NULL NULL NULL Labrus_bergylta__Ballan_wrasse__HLFlabBerg1__GCF_963930695.1 Labrus bergylta Ballan wrasse 56723 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Labrus HLFlabBerg1 GCF_963930695.1 NCBI fLabBer1.1 Chromosome 2024-01-31 WELLCOME SANGER INSTITUTE 2715806 31261685 NULL NULL NULL Labrus_mixtus__Cuckoo_wrasse__HLFlabMixt1__GCF_963584025.1 Labrus mixtus Cuckoo wrasse 508554 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Labrus HLFlabMixt1 GCF_963584025.1 NCBI fLabMix1.1 Chromosome 2023-11-05 WELLCOME SANGER INSTITUTE 2678957 30403003 NULL NULL NULL Notolabrus_celidotus__New_Zealand_spotty__HLFnotCeli1__GCF_009762535.1 Notolabrus celidotus New Zealand spotty spotty,Labrus celidotus 1203425 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Notolabrus HLFnotCeli1 GCF_009762535.1 NCBI fNotCel1.pri Chromosome 2019-12-18 Vertebrate Genomes Project 3748462 37090664 NULL NULL NULL Tautogolabrus_adspersus__Cunner__HLFtauAdsp1__GCA_020745685.1 Tautogolabrus adspersus Cunner Labrus adspersus 34787 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Tautogolabrus HLFtauAdsp1 GCA_020745685.1 NCBI fTauAds1.pri.cur Chromosome 2021-11-05 Vertebrate Genomes Project 7919333 31691308 NULL NULL NULL Thalassoma_bifasciatum__Bluehead__HLFthaBifa1A__GCA_054084025.1 Thalassoma bifasciatum Bluehead bluehead wrasse,Labrus bifasciatus 76338 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Thalassoma HLFthaBifa1A GCA_054084025.1 NCBI fThaBif1.hap1 Chromosome 2025-12-17 Vertebrate Genomes Project 23038093 34718116 NULL NULL NULL Xyrichtys_novacula__Pearly_razorfish__HLFxyrNova1__GCA_962446985.1 Xyrichtys novacula Pearly razorfish Coryphaena novacula,Hemipteronotus novacula 13765 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Labriformes; Labridae; Xyrichtys HLFxyrNova1 GCA_962446985.1 NCBI fXyrNov1.1 Chromosome 2023-08-19 IMEDEA 21535717 34328652 NULL NULL NULL Datnioides_polota__Four-banded_tigerfish__HLFdatPolo1A__GCA_054851445.1 Datnioides polota Four-banded tigerfish Chaetodon quadrifasciatus,four-banded triple-tail,four-barred tigerfish,Datnioides quadrifasciatus,Coius polota 428446 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Lobotiformes; Datnioididae; Datnioides HLFdatPolo1A GCA_054851445.1 NCBI fDatPol1.hap1 Chromosome 2026-01-30 Vertebrate Genomes Project 16295134 25086582 NULL NULL NULL Antennarius_maculatus__Warty_frogfish__HLFantMacu1__GCA_013358685.2 Antennarius maculatus Warty frogfish Phymatophryne maculata,Chironectes maculatus,warty anglerfish,largespotted angler 882753 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Lophiiformes; Antennarioidei; Antennariidae; Antennarius HLFantMacu1 GCA_013358685.2 NCBI fAntMac1.pri Chromosome 2026-04-01 Vertebrate Genomes Project 10114706 22928215 NULL NULL NULL Anthias_anthias__Swallowtail_seaperch__HLFantAnth1__GCA_964269795.2 Anthias anthias Swallowtail seaperch Labrus anthias 327821 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Anthiadidae; Anthias HLFantAnth1 GCA_964269795.2 NCBI fAntAnt1.2 Chromosome 2024-11-09 Genoscope CEA 17256112 34740752 NULL NULL NULL Anoplopoma_fimbria__Sablefish__HLFanoFimb1__GCF_027596085.1 Anoplopoma fimbria Sablefish Gadus fimbria 229290 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Anoplopomatales; Anoplopomatidae; Anoplopoma HLFanoFimb1 GCF_027596085.1 NCBI Afim_UVic_2022 Chromosome 2023-02-16 University of Victoria 2569385 26734982 NULL NULL NULL Cottus_gobio__Bullhead__HLFcotGob1__GCA_023566465.1 Cottus gobio Bullhead 100952 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus HLFcotGob1 GCA_023566465.1 NCBI ASM2356646v1 Chromosome 2022-05-31 The Max Planck Institute of Molecular Cell Biology and Genetics 10505243 28016991 NULL NULL NULL Myoxocephalus_scorpius__Shorthorn_sculpin__HLFmyoScor1A__GCA_054668685.1 Myoxocephalus scorpius Shorthorn sculpin short spined sea scorpion,father lasher,scorpion fish,daddy sculpin,Cottus scorpius 8097 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Myoxocephalus HLFmyoScor1A GCA_054668685.1 NCBI fMyoSco1.hap1 Chromosome 2026-01-23 Vertebrate Genomes Project 2948135 37154042 NULL NULL NULL Taurulus_bubalis__Longspined_bullhead__HLFtauBuba1__GCA_910589615.1 Taurulus bubalis Longspined bullhead Cottus bubalis 61643 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Taurulus HLFtauBuba1 GCA_910589615.1 NCBI fTauBub2.1 Chromosome 2021-07-07 WELLCOME SANGER INSTITUTE 13037006 29138660 NULL NULL NULL Cyclopterus_lumpus__Lumpfish__HLFcycLump1__GCF_009769545.1 Cyclopterus lumpus Lumpfish lumpsucker 8103 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Cottales; Cyclopteridae; Cyclopterinae; Cyclopterus HLFcycLump1 GCF_009769545.1 NCBI fCycLum1.pri Chromosome 2019-12-23 Vertebrate Genomes Project 4950682 23863342 NULL NULL NULL Liparis_tanakae__Tanakas_snailfish__HLFlipTana1__GCA_036178185.1 Liparis tanakae Tanakas snailfish Liparis tanakai,Cyclogaster tanakae 230148 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Liparis HLFlipTana1 GCA_036178185.1 NCBI Tanakav1 Chromosome 2024-01-31 Northwestern Polytechnical University 5908986 23043945 NULL NULL NULL Pseudoliparis_swirei__Mariana_snailfish__HLFpseSwir1__GCF_029220125.1 Pseudoliparis swirei Mariana snailfish 2059687 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Cottales; Liparidae; Pseudoliparis HLFpseSwir1 GCF_029220125.1 NCBI NWPU_hadal_v1 Chromosome 2023-03-16 Northwestern Polytechnical University 4219354 25738204 NULL NULL NULL Apeltes_quadracus__Fourspine_stickleback__HLFapeQuad1__GCA_021346845.1 Apeltes quadracus Fourspine stickleback Gasterosteus quadracus 240154 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Apeltes HLFapeQuad1 GCA_021346845.1 NCBI UniBe_ApeQuad_1.0 Chromosome 2022-01-03 University of Bern 5710868 18096870 NULL NULL NULL Gasterosteus_aculeatus__Three-spined_stickleback__HLFgasAcul3A__GCF_964276395.1 Gasterosteus aculeatus Three-spined stickleback three spined stickleback 69293 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus HLFgasAcul3A GCF_964276395.1 NCBI fGasAcu3.hap1.1 Chromosome 2024-10-28 WELLCOME SANGER INSTITUTE 2544530 21933526 NULL NULL NULL Pungitius_pungitius__Ninespine_stickleback__HLFpunPung1__GCF_949316345.1 Pungitius pungitius Ninespine stickleback Gasterosteus pungitius 134920 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius HLFpunPung1 GCF_949316345.1 NCBI fPunPun2.1 Chromosome 2023-04-08 WELLCOME SANGER INSTITUTE 1362288 21005440 NULL NULL NULL Pungitius_sinensis__Amur_stickleback__HLFpunSine1__GCA_049949165.1 Pungitius sinensis Amur stickleback Gasterosteus sinensis 497904 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Pungitius HLFpunSine1 GCA_049949165.1 NCBI ASM4994916v1 Chromosome 2025-04-28 Zhejiang University 21937384 22433866 NULL NULL NULL Spinachia_spinachia__Sea_stickleback__HLFspiSpin1A__GCA_048126635.1 Spinachia spinachia Sea stickleback Gasterosteus spinachia 206126 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Spinachia HLFspiSpin1A GCA_048126635.1 NCBI SpiSpi1_v1.hap1 Chromosome 2025-02-27 University of Copenhagen 6606641 19449660 NULL NULL NULL Spinachia_spinachia__Sea_stickleback__HLFspiSpin1B__GCA_048127205.1 Spinachia spinachia Sea stickleback Gasterosteus spinachia 206126 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Spinachia HLFspiSpin1B GCA_048127205.1 NCBI SpiSpi1_v1.hap2 Chromosome 2025-02-27 University of Copenhagen 6418828 19296231 NULL NULL NULL Anisarchus_medius__Stout_eelblenny__HLFaniMedi1__GCA_046127435.1 Anisarchus medius Stout eelblenny Lumpenus medius,Clinus medius 980385 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Zoarcales; Stichaeidae; Lumpeninae; Anisarchus HLFaniMedi1 GCA_046127435.1 NCBI ASM4612743v1 Chromosome 2024-12-17 Fujian Agriculture and Forestry University 11045112 30207471 NULL NULL NULL Lycodopsis_pacificus__Blackbelly_eelpout__HLFlycPaci1A__GCA_028021495.1 Lycodopsis pacificus Blackbelly eelpout Lycodes pacificus 1772091 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Zoarcales; Zoarcidae; Lycodinae; Lycodopsis HLFlycPaci1A GCA_028021495.1 NCBI fLycPai1.hap1 Scaffold 2023-01-26 Vertebrate Genomes Project 4650094 28110170 NULL NULL NULL Zoarces_viviparus__Viviparous_blenny__HLFzoaViv1__GCA_040110945.1 Zoarces viviparus Viviparous blenny Blennius viviparus,Zoarces americanus viviparus 48416 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Cottioidei; Zoarcales; Zoarcidae; Zoarcinae; Zoarces HLFzoaViv1 GCA_040110945.1 NCBI Zoavi_1_2 Chromosome 2024-06-12 University of Trier 10929469 26101846 NULL NULL NULL Pseudochaenichthys_georgianus__South_Georgia_icefish__HLFpseGeor1__GCF_902827115.2 Pseudochaenichthys georgianus South Georgia icefish 52239 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys HLFpseGeor1 GCF_902827115.2 NCBI fPseGeo1.2 Chromosome 2022-11-04 Wellcome Sanger Institute 656910 42832159 NULL NULL NULL Eleginops_maclovinus__Patagonian_blennie__HLFeleMacl1__GCF_036324505.1 Eleginops maclovinus Patagonian blennie Eleginus maclovinus 56733 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Notothenioidei; Eleginopidae; Eleginops HLFeleMacl1 GCF_036324505.1 NCBI JC_Emac_rtc_rv5 Chromosome 2024-02-01 catchenlab_notothenioids 7582354 26674500 NULL NULL NULL Sander_vitreus__Walleye__HLFsanVitr1__GCA_031162955.1 Sander vitreus Walleye Perca vitrea,Stizostedion vitreum 283036 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander HLFsanVitr1 GCA_031162955.1 NCBI sanVit1 Chromosome 2023-09-07 IGB Leibniz-Institute of Freshwater Ecology and Inland Fisheries 6206245 33333317 NULL NULL NULL Sander_lucioperca__pike-perch__HLsanLuc1__GCF_008315115.2 Sander lucioperca pike-perch Lucioperca lucioperca,Stizostedion lucioperca,Perca lucioperca 283035 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Sander HLsanLuc1 GCF_008315115.2 NCBI SLUC_FBN_1.2 Chromosome 2020-08-14 Leibniz Institute for Farm Animal Biology (FBN) 6663498 41060379 -1 -1 -1 Zingel_zingel__Zingel__HLFzinZin1__GCA_023566125.1 Zingel zingel Zingel Aspro zingel,Perca zingel 210855 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Percoidei; Percidae; Luciopercinae; Zingel HLFzinZin1 GCA_023566125.1 NCBI ASM2356612v1 Chromosome 2022-05-31 The Max Planck Institute of Molecular Cell Biology and Genetics 10133874 37573842 NULL NULL NULL Gymnocephalus_cernua__Ruffe__HLFgymCern1__GCA_023631565.1 Gymnocephalus cernua Ruffe Perca cernua,Gymnocephalus cernuus,Acerina cernua 57865 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Gymnocephalus HLFgymCern1 GCA_023631565.1 NCBI fGymCer.pri Chromosome 2022-06-02 The Max Planck Institute of Molecular Cell Biology and Genetics 10943015 38241521 NULL NULL NULL Sebastes_fasciatus__Acadian_redfish__HLFsebFasc1__GCF_043250625.1 Sebastes fasciatus Acadian redfish 394691 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Scorpaenoidei; Sebastidae; Sebastinae; Sebastes HLFsebFasc1 GCF_043250625.1 NCBI fSebFas1.pri Chromosome 2024-10-17 Vertebrate Genomes Project 7769413 36314571 NULL NULL NULL Sebastes_mentella__Deepwater_redfish__HLFsebMent1A__GCA_054850865.1 Sebastes mentella Deepwater redfish 394696 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Scorpaenoidei; Sebastidae; Sebastinae; Sebastes HLFsebMent1A GCA_054850865.1 NCBI fSebMen1.hap1 Chromosome 2026-01-30 Vertebrate Genomes Project 7391707 36014244 NULL NULL NULL Sebastes_umbrosus__Honeycomb_rockfish__HLFsebUmbr1__GCF_015220745.1 Sebastes umbrosus Honeycomb rockfish Sebastichthys umbrosus 72105 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Scorpaenoidei; Sebastidae; Sebastinae; Sebastes HLFsebUmbr1 GCF_015220745.1 NCBI fSebUmb1.pri Chromosome 2020-11-03 Vertebrate Genomes Project 11445908 34912176 NULL NULL NULL Sebastes_schlegelii__Schlegels_black_rockfish__HLFsebSchl1__GCA_014673565.1 Sebastes schlegelii Schlegels black rockfish Korean rockfish,Korean black rockfish,black rockfish,Sebastes schlegeli 214486 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Scorpaenoidei; Sebastidae; Sebastinae; Sebastes HLFsebSchl1 GCA_014673565.1 NCBI ASM1467356v1 Chromosome 2020-09-21 Qingdao Agricultural University 5473395 7939220 NULL NULL NULL Synanceia_verrucosa__Stonefish__HLFsynVerr1__GCA_029721515.1 Synanceia verrucosa Stonefish reef stonefish 51996 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Scorpaenoidei; Synanceiidae; Synanceiinae; Synanceia HLFsynVerr1 GCA_029721515.1 NCBI BGI_Synver_1.0 Chromosome 2023-04-18 BGI-SZ 12009665 27113652 NULL NULL NULL Cephalopholis_sonnerati__Tomato_hind__HLFcepSonn1__GCA_043388385.1 Cephalopholis sonnerati Tomato hind Serranus sonnerati 160708 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Cephalopholis HLFcepSonn1 GCA_043388385.1 NCBI ASM4338838v1 Complete Genome 2024-10-21 Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences 44092975 44092975 NULL NULL NULL Cromileptes_altivelis__Humpback_grouper__HLFcroAlti1__GCA_013133815.1 Cromileptes altivelis Humpback grouper Epinephelus altivelis,Chromileptes altivelis,Serranus altivelis 304459 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Cromileptes HLFcroAlti1 GCA_013133815.1 NCBI SYSU_Calt_1.1 Chromosome 2020-05-21 Sun Yat-sen University 18269829 43466551 NULL NULL NULL Epinephelus_bruneus__Longtooth_grouper__HLFepiBrun1__GCA_041684075.1 Epinephelus bruneus Longtooth grouper 323802 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus HLFepiBrun1 GCA_041684075.1 NCBI ASM4168407v1 Chromosome 2024-09-03 Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai) 37846384 44327078 NULL NULL NULL Epinephelus_polyphekadion__Camoflage_grouper__HLFepiPoly1__GCA_041411175.1 Epinephelus polyphekadion Camoflage grouper Serranus polyphekadion 241181 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus HLFepiPoly1 GCA_041411175.1 NCBI OUC_Epol_1.0 Chromosome 2024-08-23 Sanya Oceanographic Institution 40804240 47393752 NULL NULL NULL Epinephelus_tukula__Potato_grouper__HLFepiTuku1__GCA_021130775.1 Epinephelus tukula Potato grouper 327770 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus HLFepiTuku1 GCA_021130775.1 NCBI ASM2113077v1 Chromosome 2021-12-09 Yellow Sea Fisheries Research Institute 5367377 44727000 NULL NULL NULL Epinephelus_awoara__Yellow_grouper__HLFepiAwoa1__GCA_035609425.1 Epinephelus awoara Yellow grouper Serranus awoara 152218 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus HLFepiAwoa1 GCA_035609425.1 NCBI E.awoara.final_Chr_v1 Chromosome 2024-01-12 Sun Yat-sen University 39766707 41385296 NULL NULL NULL Epinephelus_cyanopodus__Specked_blue_grouper__HLFepiCyan1__GCA_026686955.1 Epinephelus cyanopodus Specked blue grouper Serranus cyanopodus 308565 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus HLFepiCyan1 GCA_026686955.1 NCBI XMU_epcya_1.0 Chromosome 2022-12-06 Xiamen University 5850290 41979993 NULL NULL NULL Epinephelus_fuscoguttatus__Brown-marbled_grouper__HLFepiFusc1__GCF_011397635.1 Epinephelus fuscoguttatus Brown-marbled grouper Perca summana fuscoguttata 293821 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus HLFepiFusc1 GCF_011397635.1 NCBI E.fuscoguttatus.final_Chr_v1 Chromosome 2020-02-20 Epinephelus fuscoguttatus 13857438 44419306 NULL NULL NULL Centropristis_striata__Black_sea_bass__HLFcenStri1__GCF_030273125.1 Centropristis striata Black sea bass Labrus striatus,black seabass 184440 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Serranoidei; Serranidae; Serraninae; Centropristis HLFcenStri1 GCF_030273125.1 NCBI C.striata_1.0 Chromosome 2023-06-20 Northeastern University 9508883 39023748 NULL NULL NULL Chelidonichthys_spinosus__Red_gurnard__HLFcheSpin1__GCA_029853015.1 Chelidonichthys spinosus Red gurnard Trigla spinosa 450224 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Perciformes; Triglioidei; Triglidae; Chelidonichthys HLFcheSpin1 GCA_029853015.1 NCBI ASM2985301v1 Chromosome 2023-04-21 Institute of Oceanology, Chinese Academy of Sciences 13767766 28108104 NULL NULL NULL Hyperoplus_lanceolatus__Great_sand-eel__HLFhypLanc1__GCA_026929865.2 Hyperoplus lanceolatus Great sand-eel Ammodytes lanceolatus 508657 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Uranoscopiformes; Ammodytidae; Hyperoplus HLFhypLanc1 GCA_026929865.2 NCBI TBG_H_lanceolatus_asm_v1.1 Chromosome 2023-01-31 Senckenberg Nature Research Society 31308663 33676134 NULL NULL NULL Bostrychus_sinensis__Four-eyed_sleeper__HLFbosSine1__GCA_020698575.1 Bostrychus sinensis Four-eyed sleeper Bostrichthys sinensis 86224 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Gobiiformes; Eleotroidei; Eleotridae; Butinae; Bostrychus HLFbosSine1 GCA_020698575.1 NCBI ASM2069857v1 Chromosome 2021-11-02 Zhejiang Ocean University 28280916 39188678 NULL NULL NULL Oxyeleotris_marmorata__Marble_goby__HLFoxyMarm1__GCA_040285405.1 Oxyeleotris marmorata Marble goby Bostrichthys marmoratus,Eleotris marmorata 86250 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Gobiiformes; Eleotroidei; Eleotridae; Butinae; Oxyeleotris HLFoxyMarm1 GCA_040285405.1 NCBI O_marmorata v1.0 Chromosome 2024-06-25 Perl River Fisheries Research Institute, Chinese Academy of Fishery Sciences 13717020 45089902 NULL NULL NULL Odontamblyopus_rebecca__Bony_fishes__HLFodoRebe1__GCA_030686955.1 Odontamblyopus rebecca Bony fishes 714203 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Amblyopinae; Odontamblyopus HLFodoRebe1 GCA_030686955.1 NCBI ASM3068695v1 Chromosome 2023-08-08 Northwestern Polytechnical University 24516954 41673572 NULL NULL NULL Odontamblyopus_lacepedii__Warasubo__HLFodoLace1__GCA_034769755.1 Odontamblyopus lacepedii Warasubo Amblyopus lacepedii 714202 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Amblyopinae; Odontamblyopus HLFodoLace1 GCA_034769755.1 NCBI ASM3476975v1 Chromosome 2023-12-29 Zhejiang Ocean University 12122453 42702054 NULL NULL NULL Proterorhinus_semilunaris__Tubenose_goby__HLFproSemi1__GCA_021464625.1 Proterorhinus semilunaris Tubenose goby Gobius semilunaris 322563 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Benthophilinae; Ponticolini; Proterorhinus HLFproSemi1 GCA_021464625.1 NCBI fProSem1.pri.20201207 Chromosome 2022-01-18 The Max Planck Institute of Molecular Cell Biology and Genetics 7924916 39007679 NULL NULL NULL Periophthalmus_magnuspinnatus__Mudskipper__HLFperMagn1__GCF_009829125.3 Periophthalmus magnuspinnatus Mudskipper 409849 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Gobiiformes; Gobioidei; Gobiidae; Oxudercinae; Periophthalmus HLFperMagn1 GCF_009829125.3 NCBI fPerMag1.2.pri Chromosome 2023-03-21 Vertebrate Genomes Project 2301275 32865169 NULL NULL NULL Apogon_imberbis__Cardinalfish__HLFapoImbe1__GCA_964211915.2 Apogon imberbis Cardinalfish Mullus imberbis,king of the mullets,cardinal fish 357811 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Apogon; Apogon HLFapoImbe1 GCA_964211915.2 NCBI fApoImb1.1 Chromosome 2024-11-15 Genoscope CEA 40310727 40310727 NULL NULL NULL Bassozetus_sp._2_HX-2024__cusk_eel_species_two__HLFbasSpet1__GCA_048564805.1 Bassozetus sp. 2 HX-2024 cusk eel species two 3239379 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ophidiaria; Ophidiiformes; Ophidioidei; Ophidiidae; Neobythitinae; Bassozetus; unclassified Bassozetus HLFbasSpet1 GCA_048564805.1 NCBI ASM4856480v1 Chromosome 2025-03-12 IDSSE 11401552 30310941 NULL NULL NULL Odontesthes_bonariensis__Pejerrey__HLFodoBona1A__GCA_027942865.1 Odontesthes bonariensis Pejerrey Atherina bonariensis 219752 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Atheriniformes; Atherinopsidae; Atherinopsinae; Odontesthes HLFodoBona1A GCA_027942865.1 NCBI fOdoBon6.hap1 Chromosome 2023-01-24 Vertebrate Genomes Project 9831534 39252737 NULL NULL NULL Melanotaenia_boesemani__Boesemans_rainbowfish__HLFmelBoes1__GCF_017639745.1 Melanotaenia boesemani Boesemans rainbowfish 1250792 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Atheriniformes; Melanotaeniidae; Melanotaenia HLFmelBoes1 GCF_017639745.1 NCBI fMelBoe1.pri Chromosome 2021-03-30 Vertebrate Genomes Project 9299978 37878235 NULL NULL NULL Neostethus_bicornis__Two-horned_Priapiumfish__HLFneoBico1__GCA_902685375.1 Neostethus bicornis Two-horned Priapiumfish 300306 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Atheriniformes; Phallostethidae; Neostethus HLFneoBico1 GCA_902685375.1 NCBI fNeoBic2.1 Chromosome 2019-11-26 SC 23089617 29119677 NULL NULL NULL Cololabis_saira__Pacific_saury__HLFcolSair1__GCF_033807715.1 Cololabis saira Pacific saury Scomberesox saira 129043 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Beloniformes; Belonoidei; Belonidae; Cololabis HLFcolSair1 GCF_033807715.1 NCBI fColSai1.1 Chromosome 2023-11-22 National Insitute of Genetics 8087617 47710000 NULL NULL NULL Xenentodon_cancila__Freshwater_garfish__HLFxenCanc1__GCA_014839995.1 Xenentodon cancila Freshwater garfish Esox cancila,Asian needlefish,silver needlefish 129108 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Beloniformes; Belonoidei; Belonidae; Xenentodon HLFxenCanc1 GCA_014839995.1 NCBI fXenCan1.pri Chromosome 2020-10-02 Vertebrate Genomes Project 2195850 28679447 NULL NULL NULL Nothobranchius_furzeri__Turquoise_killifish__HLFnotFurz3__GCF_043380555.1 Nothobranchius furzeri Turquoise killifish 105023 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Nothobranchiidae; Nothobranchius HLFnotFurz3 GCF_043380555.1 NCBI NfurGRZ-RIMD1 Chromosome 2024-10-21 Squalomix Extra 9298000 76394082 NULL NULL NULL Nothobranchius_furzeri__turquoise_killifish__HLnotFur2__GCF_027789165.1 Nothobranchius furzeri turquoise killifish 105023 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Nothobranchiidae; Nothobranchius HLnotFur2 GCF_027789165.1 NCBI UI_Nfuz_MZM_1.0 Scaffold 2023-01-12 University of Idaho at Moscow 707518 42375988 -1 -1 -1 Nematolebias_whitei__Rio_pearlfish__HLFnemWhit1__GCF_014905685.2 Nematolebias whitei Rio pearlfish Cynolebias whitei,Simpsonichthys whitei 451745 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Rivulidae; Nematolebias HLFnemWhit1 GCF_014905685.2 NCBI NemWhi1 Chromosome 2021-03-24 Michigan State University 19984 49984095 NULL NULL NULL Anableps_anableps__Largescale_foureyes__HLFanaAnab1__GCA_014839685.1 Anableps anableps Largescale foureyes Cobitis anableps,four eyed fish 195821 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Anablepidae; Anablepinae; Anableps HLFanaAnab1 GCA_014839685.1 NCBI fAnaAna1.pri Chromosome 2020-10-02 Vertebrate Genomes Project 17460000 39321252 NULL NULL NULL Cyprinodon_diabolis__Devils_Hole_pupfish__HLFcypDiab1__GCA_030533445.1 Cyprinodon diabolis Devils Hole pupfish 69136 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Cyprinodontidae; Cyprinodontinae; Cyprinodontini; Cyprinodon HLFcypDiab1 GCA_030533445.1 NCBI UCB_CyDiab_1.0 Chromosome 2023-07-25 UC Berkeley 12045327 48018592 NULL NULL NULL Cyprinodon_nevadensis_mionectes__Amargosa_pupfish__HLFcypNeva1__GCA_030533455.1 Cyprinodon nevadensis mionectes Amargosa pupfish 69241 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Cyprinodontidae; Cyprinodontinae; Cyprinodontini; Cyprinodon; Cyprinodon nevadensis HLFcypNeva1 GCA_030533455.1 NCBI UCB_CyNevMio_1.0 Chromosome 2023-07-25 UC Berkeley 7641286 46318508 NULL NULL NULL Fundulus_diaphanus__Banded_killifish__HLFfunDiap1A__GCA_037039145.1 Fundulus diaphanus Banded killifish Hydrargira diaphana 54267 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus HLFfunDiap1A GCA_037039145.1 NCBI fFunDia1.hap1 Chromosome 2024-03-06 Vertebrate Genomes Project 11036555 57717734 NULL NULL NULL Girardinichthys_multiradiatus___Dark-edged_Splitfin__HLFgirMult1__GCF_021462225.1 Girardinichthys multiradiatus Dark-edged Splitfin Characodon multiradiatus 208333 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Goodeidae; Girardinichthys HLFgirMult1 GCF_021462225.1 NCBI DD_fGirMul_XY1 Chromosome 2022-02-24 Max Planck Institute of Molecular Cell Biology and Genetics 13818222 47419401 NULL NULL NULL Gambusia_affinis__Western_mosquitofish__HLFgamAffi1__GCF_019740435.1 Gambusia affinis Western mosquitofish Heterandria affinis 33528 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Gambusia HLFgamAffi1 GCF_019740435.1 NCBI SWU_Gaff_1.0 Chromosome 2021-08-25 Southwest University 12906370 29761488 NULL NULL NULL Poecilia_picta__Swamp_guppy__HLFpoePict1__GCA_033032245.1 Poecilia picta Swamp guppy Micropoecilia picta,Poecilia (Micropoecilia) picta 69234 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poecilia HLFpoePict1 GCA_033032245.1 NCBI UBC_Ppic_1.0 Chromosome 2023-10-27 University of British Columbia 7297303 33053486 NULL NULL NULL Xiphophorus_birchmanni__Sheepshead_swordtail__HLFxipBirc1__GCA_036418095.1 Xiphophorus birchmanni Sheepshead swordtail 32469 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus HLFxipBirc1 GCA_036418095.1 NCBI xbir-COAC-16-VIII-22-M_v2023.1 Chromosome 2024-02-07 Stanford University 26085954 32557555 NULL NULL NULL Xiphophorus_couchianus__Monterrey_platyfish__HLFxipCouc1__GCF_001444195.1 Xiphophorus couchianus Monterrey platyfish Limia couchiana 32473 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus HLFxipCouc1 GCF_001444195.1 NCBI X_couchianus-1.0 Chromosome 2018-09-19 McDonnell Genome Institute - Washington University School of Medicine 15315838 30550352 NULL NULL NULL Xiphophorus_maculatus__Southern_platyfish__HLFxipMacu2__GCF_002775205.1 Xiphophorus maculatus Southern platyfish Platypoecilus maculatus 8083 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus HLFxipMacu2 GCF_002775205.1 NCBI X_maculatus-5.0-male Chromosome 2017-12-07 The Genome Institute, Washington University at St. Louis 9181372 31535491 NULL NULL NULL Xiphophorus_malinche__Highland_swordtail__HLFxipMali1__GCA_041429825.1 Xiphophorus malinche Highland swordtail 32476 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus HLFxipMali1 GCA_041429825.1 NCBI ASM4142982v1 Chromosome 2024-08-23 Stanford University 20992352 32265334 NULL NULL NULL Xiphophorus_cortezi__Delicate_swordtail__HLFxipCort1__GCA_041380905.1 Xiphophorus cortezi Delicate swordtail Xiphophorus montezumae cortezi 32472 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus HLFxipCort1 GCA_041380905.1 NCBI ASM4138090v1 Chromosome 2024-08-21 University of California, Los Angeles 28355538 32220398 NULL NULL NULL Xiphophorus_hellerii__Green_swordtail__HLFxipHell1__GCF_003331165.1 Xiphophorus hellerii Green swordtail Xiphophorus helleri 8084 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus HLFxipHell1 GCF_003331165.1 NCBI Xiphophorus_hellerii-4.1 Chromosome 2019-12-05 McDonnell Genome Institute - Washington University School of Medicine 7084538 32404057 NULL NULL NULL Valencia_hispanica__Valencia_toothcarp__HLFvalHisp1__GCA_963556495.2 Valencia hispanica Valencia toothcarp Hydrargyra hispanica 195855 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Valenciidae; Valencia HLFvalHisp1 GCA_963556495.2 NCBI fValHis1.1_MT Chromosome 2023-12-06 Centro Nacional de AnĂ¡lisis GenĂ³mico 38296799 56937854 NULL NULL NULL Chromidotilapia_guntheri__Guenthers_mouthbrooder__HLFchrGunt1__GCA_040805835.1 Chromidotilapia guntheri Guenthers mouthbrooder Hemichromis guntheri,Chromidotilapia guentheri 762751 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Chromidotilapiini; Chromidotilapia HLFchrGunt1 GCA_040805835.1 NCBI ASM4080583v1 Chromosome 2024-07-22 University of Maryland 33939210 34972419 NULL NULL NULL Haplochromis_burtoni__Burtons_mouthbrooder__HLFhapBurt2A__GCA_054883305.1 Haplochromis burtoni Burtons mouthbrooder Chromis burtoni,Astatotilapia burtoni 8153 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Haplochromis HLFhapBurt2A GCA_054883305.1 NCBI fHapBur2.hap1 Chromosome 2026-01-30 Vertebrate Genomes Project 9972013 41410517 NULL NULL NULL Labeotropheus_trewavasae__Scrapermouth_mbuna__HLFlabTrew1__GCA_047663975.1 Labeotropheus trewavasae Scrapermouth mbuna 120210 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Labeotropheus HLFlabTrew1 GCA_047663975.1 NCBI ASM4766397v1 Chromosome 2025-02-12 University of Maryland 37729116 39702102 NULL NULL NULL Neolamprologus_multifasciatus__Multi__HLFneoMult1__GCA_963576455.2 Neolamprologus multifasciatus Multi Lamprologus multifasciatus 420107 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Lamprologini; Neolamprologus HLFneoMult1 GCA_963576455.2 NCBI fNeoMul1.2 Chromosome 2024-07-23 WELLCOME SANGER INSTITUTE 6446225 37578393 NULL NULL NULL Sarotherodon_galilaeus__Mango_tilapia__HLFsarGali1__GCA_046562855.1 Sarotherodon galilaeus Mango tilapia Sparus galilaeus,Tilapia galilaea 8144 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Sarotherodon HLFsarGali1 GCA_046562855.1 NCBI ASM4656285v1 Chromosome 2025-01-08 Shanghai Ocean University 31058222 41203619 NULL NULL NULL Pelmatolapia_mariae__Spotted_tilapia__HLFpelMari1__GCF_036321145.2 Pelmatolapia mariae Spotted tilapia Tilapia mariae 158779 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Pelmatolapiini; Pelmatolapia HLFpelMari1 GCF_036321145.2 NCBI Pm_UMD_F_2 Chromosome 2024-04-17 University of Maryland 31656669 42111825 NULL NULL NULL Archocentrus_centrarchus__Flier_cichlid__HLFarcCent1__GCF_007364275.1 Archocentrus centrarchus Flier cichlid Cichlasoma centrarchus,Heros centrarchus,Amphilophus centrarchus 63155 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; New World cichlids; Cichlasomatinae; Heroini; Archocentrus HLFarcCent1 GCF_007364275.1 NCBI fArcCen1 Chromosome 2019-08-01 Vertebrate Genomes Project 2146538 35590001 NULL NULL NULL Parachromis_managuensis__Guapote_tigre__HLFparMana1__GCA_040437545.1 Parachromis managuensis Guapote tigre Parachromis managuense,Heros managuensis,Herichthys managuense,Cichlasoma managueuse,Nandopsis managuensis 172535 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; New World cichlids; Cichlasomatinae; Heroini; Parachromis HLFparMana1 GCA_040437545.1 NCBI ASM4043754v1 Chromosome 2024-07-02 Perl River Fisheries Research Institute, Chinese Academy of Fishery Sciences 5144572 38189600 NULL NULL NULL Petenia_splendida__Bay_snook__HLFpetSple1__GCA_040437555.1 Petenia splendida Bay snook 96998 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; New World cichlids; Cichlasomatinae; Heroini; Petenia HLFpetSple1 GCA_040437555.1 NCBI P_splendida v1.0 Chromosome 2024-07-02 Perl River Fisheries Research Institute, Chinese Academy of Fishery Sciences 31459000 38806050 NULL NULL NULL Pholidichthys_leucotaenia__Convict_Blenny__HLFphoLeuc1__GCA_020510985.1 Pholidichthys leucotaenia Convict Blenny 390368 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Cichlomorphae; Cichliformes; Pholidichthyidae; Pholidichthys HLFphoLeuc1 GCA_020510985.1 NCBI fPhoLeu1.pri Chromosome 2021-10-15 G10K 5867598 435632707 NULL NULL NULL Mugil_cephalus__Flathead_mullet__HLFmugCeph1__GCF_022458985.1 Mugil cephalus Flathead mullet Mugil japonicus,Mugil galapagensis,Formosan grey mullet,Mugil cephalotus,Formosan gray mullet 48193 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Mugilomorphae; Mugiliformes; Mugilidae; Mugil HLFmugCeph1 GCF_022458985.1 NCBI CIBA_Mcephalus_1.1 Chromosome 2022-03-04 ICAR - Central Institute of Brackishwater Aquaculture 20153794 28326520 NULL NULL NULL Parambassis_ranga__Indian_glassy_fish__HLFparRang1__GCA_900634625.2 Parambassis ranga Indian glassy fish Ambassis ranga,Chanda ranga,Pseudambassis ranga 210632 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Ovalentaria incertae sedis; Ambassidae; Parambassis HLFparRang1 GCA_900634625.2 NCBI fParRan2.2 Chromosome 2020-07-31 SC 5080925 22993012 NULL NULL NULL Acanthochromis_polyacanthus__Spiny_chromis__HLFacaPoly1__GCF_021347895.1 Acanthochromis polyacanthus Spiny chromis Acanthochromis polyacathus,spiny damselfish,Dascyllus polyacanthus 80966 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Ovalentaria incertae sedis; Pomacentridae; Acanthochromis HLFacaPoly1 GCF_021347895.1 NCBI KAUST_Apoly_ChrSc Chromosome 2022-01-11 King Abdullah University of Science and Technology 5524274 41709588 NULL NULL NULL Amphiprion_ocellaris__Clown_anemonefish__HLFampOcel1__GCF_022539595.1 Amphiprion ocellaris Clown anemonefish Amphiprion ocellaris 'black' 80972 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Ovalentaria incertae sedis; Pomacentridae; Amphiprion HLFampOcel1 GCF_022539595.1 NCBI ASM2253959v1 Chromosome 2022-03-10 Okinawa Institute of Science and Technology 812338 36880113 NULL NULL NULL Scomberomorus_guttatus__Indo-Pacific_king_mackerel__HLFscoGutt1__GCA_038419695.1 Scomberomorus guttatus Indo-Pacific king mackerel Scomberomorus guttatum,Scomber guttatus 99343 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Scomberomorini; Scomberomorus HLFscoGutt1 GCA_038419695.1 NCBI ASM3841969v1 Chromosome 2024-04-23 Shantou University 8837785 32882740 NULL NULL NULL Scomber_japonicus__Chub_mackerel__HLFscoJapo1__GCF_027409825.1 Scomber japonicus Chub mackerel Pneumatophorus japonicus,Spanish mackerel 13676 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Scombrini; Scomber HLFscoJapo1 GCF_027409825.1 NCBI fScoJap1.pri Chromosome 2022-12-28 Vertebrate Genomes Project 4898551 34636535 NULL NULL NULL Scomber_scombrus__Atlantic_mackerel__HLFscoScom1__GCF_963691925.1 Scomber scombrus Atlantic mackerel Scomber scomber 13677 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Scombrini; Scomber HLFscoScom1 GCF_963691925.1 NCBI fScoSco1.1 Chromosome 2023-12-07 WELLCOME SANGER INSTITUTE 1496448 31095048 NULL NULL NULL Euthynnus_affinis__Eastern_little_tuna__HLFeutAffi1__GCA_029490765.1 Euthynnus affinis Eastern little tuna island bonito,island skipjack,kawakawa,Thynnus affinis 8227 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Thunnini; Euthynnus HLFeutAffi1 GCA_029490765.1 NCBI ASM2949076v1 Chromosome 2023-04-06 Chinese Academy of Fishery Sciences 11935974 33806689 NULL NULL NULL Katsuwonus_pelamis__Skipjack_tuna__HLFkatPel1__GCA_041053085.1 Katsuwonus pelamis Skipjack tuna Euthynnus pelamis,bonito,Scomber pelamis 8226 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Thunnini; Katsuwonus HLFkatPel1 GCA_041053085.1 NCBI ASM4105308v1 Chromosome 2024-08-05 Sun Yat-sen University 11187421 32733951 NULL NULL NULL Thunnus_maccoyii__Southern_bluefin_tuna__HLFthuMacc1__GCF_910596095.1 Thunnus maccoyii Southern bluefin tuna Thynnus maccoyii 8240 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Thunnini; Thunnus HLFthuMacc1 GCF_910596095.1 NCBI fThuMac1.1 Chromosome 2021-07-07 Wellcome Sanger Institute 26803536 33761101 NULL NULL NULL Thunnus_thynnus__Atlantic_bluefin_tuna__HLFthuThyn1__GCF_963924715.1 Thunnus thynnus Atlantic bluefin tuna bluefin tuna,Scomber thynnus,northern bluefin tuna 8237 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Thunnini; Thunnus HLFthuThyn1 GCF_963924715.1 NCBI fThuThy2.1 Chromosome 2024-01-29 WELLCOME SANGER INSTITUTE 2956553 34318521 NULL NULL NULL Thunnus_albacares__Yellowfin_tuna__HLFthuAlba1__GCA_914725855.2 Thunnus albacares Yellowfin tuna Neothunnus macropterus,Scomber albacares 8236 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Scombridae; Scombrinae; Thunnini; Thunnus HLFthuAlba1 GCA_914725855.2 NCBI fThuAlb1.2 Chromosome 2023-10-06 WELLCOME SANGER INSTITUTE 26795544 34622995 NULL NULL NULL Pampus_argenteus__Silver_pomfret__HLFpamArge1__GCA_036937835.1 Pampus argenteus Silver pomfret Stromateoides argenteus,zobaidy,Ishikawa nozawae,Stromateus argenteus,Pampus nozawae 206143 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Stromateidae; Pampus HLFpamArge1 GCA_036937835.1 NCBI ASM3693783v1 Chromosome 2024-03-06 Ningbo University 24748353 24748353 NULL NULL NULL Lepturacanthus_savala__Savalani_hairtail__HLFlepSava1__GCA_030544235.1 Lepturacanthus savala Savalani hairtail Trichiurus savala 435161 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Trichiuridae; Trichiurinae; Lepturacanthus HLFlepSava1 GCA_030544235.1 NCBI ASM3054423v1 Chromosome 2023-08-08 Guangdong Ocean University 19013249 32774443 NULL NULL NULL Trichiurus_japonicus__Largehead_hairtail__HLFtriJapo1__GCA_046254865.1 Trichiurus japonicus Largehead hairtail 235211 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Pelagiaria; Scombriformes; Trichiuridae; Trichiurinae; Trichiurus HLFtriJapo1 GCA_046254865.1 NCBI ASM4625486v1 Chromosome 2024-12-23 Shanghai Ocean University 6074046 39190577 NULL NULL NULL Synchiropus_splendidus__Mandarinfish__HLFsynSple1__GCF_027744825.2 Synchiropus splendidus Mandarinfish Pterosynchiropus splendidus,Callionymus splendidus 270530 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Callionymoidei; Callionymidae; Synchiropus HLFsynSple1 GCF_027744825.2 NCBI RoL_Sspl_1.0 Chromosome 2023-01-13 University of Idaho at Moscow 26259131 26259131 NULL NULL NULL Synchiropus_picturatus__Picturesque_dragonet__HLFsynPict1__GCA_044231675.1 Synchiropus picturatus Picturesque dragonet Pterosynchiropus picturatus,Callionymus picturatus 586865 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Callionymoidei; Callionymidae; Synchiropus HLFsynPict1 GCA_044231675.1 NCBI ASM4423167v1 Chromosome 2024-11-04 University of Copenhagen 17238139 23137118 NULL NULL NULL Mullus_barbatus__Red_mullet__HLFmulBarb1__GCA_049638725.1 Mullus barbatus Red mullet 37007 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Mulloidea; Mullidae; Mullus HLFmulBarb1 GCA_049638725.1 NCBI fMulBar1.1 Chromosome 2025-04-15 European Reference Genome Atlas 12673905 23702079 NULL NULL NULL Parupeneus_biaculeatus__Ray-finned_fishes__HLFparBiac1__GCA_042823925.3 Parupeneus biaculeatus Ray-finned fishes Upeneus biaculeatus 2862834 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Mulloidea; Mullidae; Parupeneus HLFparBiac1 GCA_042823925.3 NCBI ASM4282392v3 Chromosome 2025-03-26 Guangdong Ocean University 9351352 28908071 NULL NULL NULL Aulostomus_maculatus__Trumpetfish__HLFaulMacu1__GCA_048301465.1 Aulostomus maculatus Trumpetfish 150449 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathiformes incertae sedis; Aulostomidae; Aulostomus HLFaulMacu1 GCA_048301465.1 NCBI ASM4830146v1 Chromosome 2025-03-03 University of Copenhagen 6127553 28137510 NULL NULL NULL Fistularia_commersonii__Bluespotted_cornetfish__HLFfisComm1__GCA_046529025.1 Fistularia commersonii Bluespotted cornetfish 215343 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathiformes incertae sedis; Fistulariidae; Fistularia HLFfisComm1 GCA_046529025.1 NCBI IHB_Fcom_v1 Chromosome 2025-01-07 University of Chinese Academy of Sciences 15678885 18690012 NULL NULL NULL Hippocampus_zosterae__Dwarf_seahorse__HLFhipZost1__GCF_025434085.1 Hippocampus zosterae Dwarf seahorse 109293 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampinae; Hippocampus HLFhipZost1 GCF_025434085.1 NCBI ASM2543408v3 Chromosome 2022-09-29 University of Idaho at Moscow 22513697 26043804 NULL NULL NULL Hippocampus_abdominalis__Big-belly_seahorse__HLFhipAbdo1__GCA_018466805.1 Hippocampus abdominalis Big-belly seahorse 109274 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampinae; Hippocampus HLFhipAbdo1 GCA_018466805.1 NCBI ZJU1.0 Chromosome 2021-05-25 Zhejiang University 8410403 21766359 NULL NULL NULL Hippocampus_trimaculatus__Longnose_seahorse__HLFhipTrim1__GCA_043880055.1 Hippocampus trimaculatus Longnose seahorse 109291 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampinae; Hippocampus HLFhipTrim1 GCA_043880055.1 NCBI ASM4388005v1 Chromosome 2024-10-28 BGI 18815405 23853725 NULL NULL NULL Corythoichthys_intestinalis__Scribbled_pipefish__HLFcorInte1__GCF_030265065.1 Corythoichthys intestinalis Scribbled pipefish Syngnatus intestinalis 161448 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Corythoichthys HLFcorInte1 GCF_030265065.1 NCBI ASM3026506v1 Chromosome 2023-06-20 University of Idaho at Moscow 56274649 59287289 NULL NULL NULL Doryrhamphus_excisus__Bluestripe_pipefish__HLFdorExci1__GCF_030265055.1 Doryrhamphus excisus Bluestripe pipefish 161450 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Doryrhamphus HLFdorExci1 GCF_030265055.1 NCBI RoL_Dexc_1.0 Chromosome 2023-06-30 University of Idaho at Moscow 18835985 21699758 NULL NULL NULL Dunckerocampus_dactyliophorus__Ringed_pipefish__HLFdunDact1__GCF_027744805.1 Dunckerocampus dactyliophorus Ringed pipefish Syngnathus dactyliophorus,Doryrhamphus dactyliophorus 161453 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Dunckerocampus HLFdunDact1 GCF_027744805.1 NCBI RoL_Ddac_1.1 Chromosome 2023-01-13 University of Idaho at Moscow 26519775 32514960 NULL NULL NULL Entelurus_aequoreus__Snake_pipefish__HLFentAequ1__GCF_033978785.1 Entelurus aequoreus Snake pipefish Syngnathus aequoreus 161455 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Entelurus HLFentAequ1 GCF_033978785.1 NCBI RoL_Eaeq_v1.1 Chromosome 2023-12-01 University of Idaho at Moscow 2039131 75786231 NULL NULL NULL Nerophis_ophidion__Straightnose_pipefish__HLFnerOphi1__GCF_033978795.1 Nerophis ophidion Straightnose pipefish Syngnathus ophidion 159077 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Nerophis HLFnerOphi1 GCF_033978795.1 NCBI RoL_Noph_v1.0 Chromosome 2023-12-01 University of Idaho at Moscow 4791538 66953617 NULL NULL NULL Phycodurus_eques__Leafy_seadragon__HLFphyEque1__GCF_024500275.1 Phycodurus eques Leafy seadragon Glauert's sea-dragon,Phyllopteryx eques,leafy sea dragon 693459 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Phycodurus HLFphyEque1 GCF_024500275.1 NCBI UOR_Pequ_1.1 Chromosome 2022-08-03 University of Oregon 16851628 30018624 NULL NULL NULL Phyllopteryx_taeniolatus__Common_seadragon__HLFphyTaen1__GCF_024500385.1 Phyllopteryx taeniolatus Common seadragon Syngnatus taeniolatus 161469 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Phyllopteryx HLFphyTaen1 GCF_024500385.1 NCBI UOR_Ptae_1.2 Chromosome 2022-08-03 University of Oregon 9935855 31005324 NULL NULL NULL Syngnathoides_biaculeatus__Alligator_pipefish__HLFsynBiac1__GCF_019802595.1 Syngnathoides biaculeatus Alligator pipefish Syngnathus biaculeatus 300417 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Syngnathoides HLFsynBiac1 GCF_019802595.1 NCBI ASM1980259v1 Chromosome 2021-09-09 South China Sea Institute of Oceanology, Chinese Academy of Sciences 18018000 31867959 NULL NULL NULL Syngnathus_typhle__Broad-nosed_pipefish__HLFsynTyph1__GCF_033458585.1 Syngnathus typhle Broad-nosed pipefish 161592 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Syngnathus HLFsynTyph1 GCF_033458585.1 NCBI RoL_Styp_1.0 Chromosome 2023-11-13 University of Idaho at Moscow 9083732 14905450 NULL NULL NULL Syngnathus_scovelli__Gulf_pipefish__HLFsynScov1__GCF_024217435.2 Syngnathus scovelli Gulf pipefish Siphostoma scovelli 161590 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Syngnathus HLFsynScov1 GCF_024217435.2 NCBI RoL_Ssco_1.2 Chromosome 2022-10-17 University of Idaho at Moscow 15551623 17337441 NULL NULL NULL Syngnathus_acus__Greater_pipefish__HLFsynAcus1__GCF_901709675.1 Syngnathus acus Greater pipefish Syngnathus rubescens,Syngnathus acus rubescens 161584 Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathinae; Syngnathus HLFsynAcus1 GCF_901709675.1 NCBI fSynAcu1.2 Chromosome 2020-07-31 SC 11959915 14974571 NULL NULL NULL