>rnd-1_family-63#LINE/L1 ( RepeatScout Family Size = 129, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCAGTCCGCCATTACCGAGGCAGTCCGCCATTACCGAGGCAGTCCGCCA
TTACCGAGGCAGTCCGCCATTACCGAGGCAGTCCGCCATTACNGAGGCAG
TCCGCCATTACTGAGGCAGACCGCCATTACCGAGGCAGTTCTAACCNTAC
CTCTGTAAACAAAACCGCAAGGAAGTTCACACAGCAGCTGGGCAGAGCCC
GCGGCAGCTCAGCAACGCCTCTGCTGGCAGACTGTGACTAGACTACCTCC
TCGCTGGGCAGGGCATCTCTGAAAAAAGGCAGCAGCACGTCAGGGACTTA
TAAATAAAGCCCCACCTTCCCGGGACAGAGCACCTGGGAAAAGGGGCGGT
TGTGAGTTCCGCTGCAGCAGACTTAAACGTNCCTGCCCGGCAGCTCTGAA
CGGAACAACGGAGCTCCCAGCACAGCACTTGAGCTCCTATAAGGGACAGA
CTGCCTCCTCAAGCGGCTCCCTGACCCCCGTATATCCAAAGAGACACCTC
ATANAGGAGAGCTCNGGCTGACATCTGGCGGGTACCCTTCTGGGACGAAG
NTANCAGAGGAAGAAACNGGCAGCAACCCTTGCTGTTCTGCAGCCNCCGC
GGGTGATCCCCAGGCAAGCAGGGTCTGGAGTGGACCTCCAGCAGTCCTGC
AGCAGAGGGGCCTGACTGTTAGAAGGAAAACTAANAAACAGAAAGAAATA
GCTTCAACATCAACAAAAAGGACGTCCACTCAGAGACCCCATCCGAAAGT
CACCAACTNCAAAGACCANAGGTAGATAAATCCACGAAGATGGGAAGAAA
CCAGCGCAAAAAGGNTGAAAACCAGAATGCCTCTCCTCCTCCAAGGGATC
ACAACTCCTCACCAGCAAGGGAACAAAGCTGGATGGAGAATGAGTCTGAT
GAATTGACAGAAGCAGGCTTCAGAAGGTGGGTAATAACAAACTTCTCTGA
GCTAAAGGAGCATGTTCTAACCCAATGCAAAGAAACTAAGAACCTTGAAA
AAAGGTTAGACGAAATGCTAACTAGAATAANCAGCTTAGAGAAGAACATA
AATGACTTGATGGAGCTGAAAAACACAGCACGAGAACTTCGCGAAGCATA
CACAAGTTTCAATAGCCGAATCGACCAAGCGGAAGAAAGGATATCAGAGA
TTGAAGATCAACTCAATGAAATAAAA
>rnd-1_family-42#LINE/L1 ( RepeatScout Family Size = 221, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAGATGGCGCTGTAGGAGCAGCTCAGGATTGCAGCTCCCAGTGAAAGCGC
AGAGGGTGAGTGGACGCCGCATTTCCAGACGGATCTTTATTGCCCACAGA
CCGGGAGATTCCCAGGTGTAGGAGCCCCACGGGNCGCCAGCGCGGCTGTT
TCGGCCGGCGCGGCCGTTTCGGCCGGCGCCGCAGCGCAGCGGCACTCCGT
ACAAAATACACTGGTCTGGTTGCCCTGTTAAACCGGCAATTNGAGATCCG
GGAAGGCAGATTAGCACATTCATCTGATTAAACGGGACTTAAACAGNGAG
CCAGGCCAGGAGATTCCCGGGCAGCGGCTGTTTCAGCCGGCGCAGTGGGT
CGCCGCACGGGAAATCACACAGATCCCGGCGCCCTTTCAGCAGGCGACTG
GAACACCTGGGAGAGAGTCAACCGTTCAACTTAAAAAAAAAAAAGGGCTC
TGAGGCAGGGAGCCAGGTGATCAGGCTCGGCGGGTCCCACCCCCACAAAG
ACAAACAAAACAGCAATTNGAAACGCTCGGGGTTGAGAGTTTCACGGCAA
GCACAGCTGAACCCGGGACGGTGCAGCTCGGTGGGGGAGGGGCGTCCGCC
ATTACCGAGGCANTCCGCCCCTACGGAGGTAGTCCGCCATTGCTGAGGCA
GCCCGCCGTTGCCGAGGCAACCCGCCATAACAGAGAGAGTCCGCCATTAC
AGAGGCGGGCCACCATCGCCGAGGCAGTTCTAACCACACCCATATAAACA
GGACTGCAGGGAAGTNCAACACGGCAGAGCAGGGCGGAGCCCACGGCAGC
AGGGCGGAGCCCACGGCAGCAGGGCGGAGCCTCTGGCAGGCAGACAGTGA
CTAGGCTGCCTCCTTGCTGGGCAGGACAGCGCAACGGATACTCATAAATA
AAGCCCTAACTCCCCGGGACAGAGCACCTGAGGAAAAAAAGGGGTTTTAT
GAGTTCTGCTGCAGCAGACTTAAACGTACCTGCCTAGCAGCCCTGAATGA
ACAACGGAGCTCACAGCTCAGCACTTGAGCTCCTATAAAGNACAGACCGT
CTCCTCAAGCAGCTCCCTGACCCCCGTATATCCAAAGAGTCACCTCACAA
AGGACTGATCAGACTGACATTTGGCGGGCATCATTCTGGGACAAAGATAG
CAGAAGAAGAAACTGGTAGCAACCCTCACTGTTCCGCAGCTGCTACAGGT
GNTCCCCAGGCAAGCAGGGCCTGGAGTGGACCTCAGCAGTCCTACAGCAG
AGGGGCCAGACTGTTAGAAGGAAAACTAAGAAACAGAAATAACTTCATCA
TCAACAATCTGGACGTCCACTCAGAGACCCAATCNGAAAGTCAGCAACTA
CNCAGACGACAGGTGGATAAATCCACAAAGATGGGAAGAAACCAGCGCAA
AAAGGAGGAAAACACCCGAAACCAGAACACCTCNCCTCCTACAAGGGATC
ACAACTCCTCACCAGCAAGGGAACAAAGCTGGACGGAGAATGAGTGTGAT
GAAATGACGGAATCAGACTTCAGAAGGTGGGTAATGAGAAACTTCCGTGA
GCTAAAAGAACATGTTCTAACTCAATGCAAAGAAACTAAGAACCTTGAAA
AAAGATTTGANGAAATGATAACGAGAATGGACAACTTAGAGAGGAATATG
AATGAATTGATGGAGCTGAAAAACACAACACGAGAACTTCGCGAAGCATG
CACAAGTTTCAACAGCCGAATCGACCAAGCAGAAGAAAGGATATCAGAGG
TCGAAGATCAACTCAATGAAATAAAACGAGAAGGCAAGATTAGAGAAAAA

>rnd-1_family-24#LTR/ERVL-MaLR ( RepeatScout Family Size = 382, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TAATCCCCACGTGTCGAGGGAGGGACCTGGTGGGAGGTGATTGGATCATG
GGGGCGGTTTCCCCCATGCTGTTCTCGTGATAGTGAGTGAGTTCTCACGA
GATCTGATGGTTTAAAAGGTGTTGGCANTTCCCCCTTCGCTCNCCTCTCT
CTCTCCTGCCGCCATGTGAAGAAGGTGCTTGCTTCCCCTTCGCCTTCCGC
CATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACTGTGAGTC
AATTAAACCTCTTTTCTTTATAAATTACCCAGTCTCAGGTAGTTCTTTAT
AGCAGTGTGAAAACGGACTAATACAGT
>rnd-1_family-56#LINE/L1 ( RepeatScout Family Size = 161, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAATGATAAGTATGTGAGGTGATGNATATGTTAATTAGCTTGATTTAGCC
ATTCCACAATGTATACATATNTCAAAACATCACGTTGTACACCATAAATA
TATACAATTTTATTTGTCAATTAAAAATAAA
>rnd-1_family-61#LINE/L1 ( RepeatScout Family Size = 132, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TCAATGGAACAGAATNGAGAGTCCAGAAATAGACCCACACATATATGGTC
AATTGATTTTCGACAAAGGTGCCAAGGCAATTCAATGGAGAAAGGATAGT
CTTTCAACAAATGGTGCTGGAACAACTGGATATCCACATGCAAAAAA
>rnd-1_family-44#LINE/L1 ( RepeatScout Family Size = 219, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAAAGAACGAAATCATGTCCTTTGCAGCAACATGGATGNAGCTGGAGG
CCATTATCCTAAGCGAATTAACGCAGGAACAGAAAACCAAATACCGCATG
TTCTCACTTATAAGTGGGAGCTAAACATTGGGTACACATGGACATAAAGA
TGGGAACAATAGACACTGGGGACTACTAGAGGGGGAGGGAGGAAGAGGGG
CAAGGGTTGAAAAACTACCTATTGGGTACTATGCTCACTACCTGGGTGAC
GGGATCATCCGTACCCCAAACCTCAGCATCACGCAATATACCCATGTAAC
AAACCTGCACATGTACCCCCTGAATCTAAAATAAAAGTTGAAANTTAAAA
TNAAAAAAAAA
>rnd-1_family-46#LINE/L1 ( RepeatScout Family Size = 204, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGGAACGATCCAAGATGGCCGATCGCTAACATCTCGGGATTGCAGCTCGC
AGTTAAAGCTCATAGAACTAGAGGACGCCACACTTTCAGACAAATTCTGG
TCGCTCAGGAGCAGAAGATTCCCAGTGGAGGAGCCACGCGGGGCAGCGGT
TTCGCCGGCACCGCGGCGCAGCGGTTTCGCCGGCACCTCCGCACGGCAGC
TCTCGGAGCTGACTAGGCGGGGCTGGCTCCCCTTCTGACCGAGGTTTGGA
GGAGCCGCGCGGGTTCCCAGCGCTGACTCCTGAGGCCGGCGCAGCAGTTG
TGCCGGCACCTCGGCGCAGAGTGAACGCGACTGGTTCCCCTTCTGACCGA
GGTTTGGAGCTCCGGGAAGGCAGACTCGCCTATTACGGACACAAGAAGGA
AGCCAGACAGGAGAAGCCTGGGCAGAAAAACACCATCAGTCTTAACGCCG
CTGTTCCTGGCCCTGGGAACTAACATCTTGGACGTCCACTCAAGAGACCT
ACTGAAAGCTGGTAATTTCAAAGACGACAGGAGGATAAATTTACAATGAT
GGGAAGAAACCAGCGTAAAAAGGCTGAGAATACTCAAAATCAGAACGCCT
CTCCCTCTAAAGATGATCACAGTTCCTCATCAACAATGGAACAAGGCTTG
ATGGAGAACGAGCGCATCCCAATAACAGAATCAGGCTTCAGGGTATGGAT
AATAAGAAACTTCCGTGAGTTAAAAGAACATGTTGTAGCCCAACGTAAAG
AAACTAAGAACTTTGAAAAAAGGTTTGACGAAATCCTAATGAGAATAGAC
AACTTAGAGAGGAATATAA
>rnd-1_family-43#LTR/ERVL-MaLR ( RepeatScout Family Size = 221, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CAGCCATGCGGAACTGTGAGTCCAATTAAACCTCTTTCCTTTATAAATTA
CCCAGTCTCGGGTATGTCTTTATCAGCAGCGTGAAAACGGACTAATACAG
TAAATTGGTACCAGGAGTGGGGCGCTGCTGTAAAGATACCCGAAAATGTG
GAAGCGACTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTTGGAGG
GCTCAGAAGAAGACAGGAAGATGTGGGAAAGTTTGGAACTTCCTAGAGAC
TTGTTGAATGGCTTTGACCAAAATGCTGATAGTGATATGGACAATGAAGT
CCAGGCTGAGGTGGTCTCAGATGGAGATGAGGAACTTGTTGGGAACTGGA
GCAAAGGTNACTCTTGCTATGCTTTAGCAAAGAGACTGGCGGCATTTTGC
CCCTGCCCTAGAGATCTGTGGAACTTTGAACTTGAGAGAGATGATTTAGG
GTATCTGGCGGAAGAAATTTCTAAGCAGCAAAGCATTCAAGAGGTGACCT
GGGTGCTGTTAAAGGCATTCAGTTTTAAAAGGGAAGCAGAGCATAAAAGT
TTGGAAAATTTGCAGCCTGACGATGCGATAGAAAAGAAAANCCCATTTTC
TGGGGAGAAATTCAAGCCGGCTGCAGAAATTTGCATAAGTAACGAGGAGC
CGAATGTTAATCGCCAAGACAATGGGGAAAATGTCTCCAGGGCATGTCAG
AGACCTTCGCGGCAGCCCCTCCCATCACAGGCCCGGAGGCCTAGGAGGAA
AAAATGGTTTCGTGGGCCGGGCCCAGGGCCCCGCTGCTNTGTGCAGCCTC
GGGACTTGGTGCCCTGCGTCCCAGCCGCTCCAGCCGTGGCTAAAAGGGGC
CAAGGTACAGCTCGGGCCGTNGCTTCAGAGGGTGCAAGCCCCAAGCCTTG
GCAGCTTCCACGTGGTGTTGAGCCTGCGGGTGCACAGAAGTCAAGAATTG
AGGTTTGGGAACCTCCGCCTAGATTTCAGAGGATGTATGGAAACGCCTGG
ATGTCCAGGCAGAAGTCTGCTGCAGGGGCGGAGCCCTCATGGAGAACCTC
TGCTAGGGCAGTGCGGAAGGGAAATGTGGGGTTGGAGCCCCCACACAGAG
TCCCCACTGGGGCACTGCCTAGTGGAGCTGTGAGAAGAGGGCCACCGTCC
TCCAGACCCCAGAATGGTAGATCCACCGACAGCTTGCACCGTGCGCCTGG
AAAAGCCGCAGACA
>rnd-1_family-76#Satellite ( RepeatScout Family Size = 101, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TAGATAATAGAAATATAAATGTACATATTGCACACATGATGTACATTTAC
ATTATTGTGATATTACGATATGTTCACATGTACATGTACATTTTACACGT
GTACATCATGTACCCATTATGTACAGATGTGCAATATGTGCACGTGTACA
TATGTGTGCACAGTGTGCACATATGTACGCTGTGTACACGTACGTACATA
GNCTGTAGATATGTACCTGCTGTACACGAATCCATAGTATGCACAATATG
TACATGTTTAAACNANGTACACACATCGGTGTACACCCACTTTGGTACCC
GCAGTAATTTCTATNTGATATGTTGAAAGCAGTATTCCCGAATGTACTCA
TAATGTGTACATTTGTTGGTATATTACAATAAATGTATAAAATAGGTACA
ATCTGGACATTNCTGTGCTATACATATGTGTACACAATACACAGGTAGAA
AAAATATACGTAATCCGTTTTATACGTACGTTTATANTTCTATAACGTGT
ACACAGGCATAGGTACATCATGTGTACACTATGCACATTTCTTCAAATAT
CAGTGATAACATATGTATCATCACAATAATACATGTNTATATCACGTGGT
ATCCCANAAANGCACATATTGCACACGGTACGTACGTATTAAGATATGTT
TACGTGTGTATCGTGCACATGTTATGTACGTTTATATTTATCGCGATAAT
ACCATATGTACACGTGTACAGATATNTGCCCACTATGTAAGCTATGTGCA
CATGTTGAAATAGGGGCACAACCAAGTACCTATGCANGGCACGCTATTCC
CACAGCCGCCACCAGAGGGCCCGNAGCAGCCCCCAGGCCCNCCCTGGCTG
CTTAGGGACCCTCTGGCTAGGGCGCCGTGCCCACAGCTACTGGGACCCGG
CTCTCTTGAAAATGACGTGTAATATGATACTGGCAACCGTATCAGACGGA
AATGATAA
>rnd-1_family-54#LINE/L1 ( RepeatScout Family Size = 165, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CTAACAGACATTTACAGAACACTCCACCCAACAACAGCAGAATACACATT
CTTTTCAAGTGCACATGGAACATTCNCCAAGATAGACCATATNCTGGGCC
ATAAAACAAGTCTCAACAAATTTAAAAGGATTGAAATCATACAAAGTATN
TTCTCTGACCACAATGGAATNAAACTAGAAATCAATAACAGAAAGANANC
TGGAAAATTCNCAAATATNTGGAAATTAAACACACTTCTAAATAACCNAT
GGGTCAAAGAAGAA
>rnd-1_family-13#SINE/Alu ( RepeatScout Family Size = 777, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCC
GAGGCGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAAC
ATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGG
TGGCGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATC
GCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTGC
ACTCCAGCCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAA
>rnd-1_family-52#DNA/hAT-Charlie ( RepeatScout Family Size = 171, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGGACATTTGGCAATGTCTGGAGACATTTTTGGTTGTCACAACTGGGAAG
GGGTGCTACTGGCATCTAGTGGGTAGAGGCCAGGGATGCTG
>rnd-1_family-68#LINE/L1 ( RepeatScout Family Size = 117, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAGACAATTCAATGGAGAAAGGATAGTCTTTTCAACAAATGGTGCTGGA
ACAACTGGATATCCACATGCAAAAAAATAAANTTGAACCTTACCTCACAC
CATATACAAAAATTAACTCAAAATGGATCATAGACCTAAATGTAAAANCT
AAAACTATAAAACTTCTAGAAGAAAACATAGGAGA
>rnd-1_family-65#LTR/ERVL ( RepeatScout Family Size = 122, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TGTGATGGTTAATACTGAGTGTCAACTTGATTGGATTGAAGGATGCAAAG
TATTGNTCCTGGGTGTGTCTGTGAGGGTGTTGCCAAAGGAGATTAACATT
TGAGTCAGTGGACTGGGGAAGGCAGACCCACCCTCAATCTGGGTGGGCAC
CATCTAATCAGCTGCCAGCGCGGCTAGAATATAAAGCAGGCAGAAAAACG
TGAAAAGGCAGACTGGCCTAGCCTCCCAGCCTNCATCTTTCTCCCGTGCT
GGATGCTTCCTGCCCTCGAACATCAGACTCCAAGTTCTTCGGCTTTGGGA
CTCGGACTGGCTCTCCTTGCTCCTCAGCTTGCAGACGGCCTATTGTGGGA
CCTTGTGATCGTGTGAGTTAATACTTAATAAA
>rnd-1_family-78#DNA/hAT-Charlie ( RepeatScout Family Size = 100, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCTGTTAGGAACCGGGCCGCACAGCAGGAGGTGAGCGGCGGGCGAGCG
AGCATTACCGCCTGAGCTCCGCCTCCTGTCAGATCAGCGGCGGCATTAGA
TTCTCATAGGAGCGCGAACCCTATTGTGAACTGCGCATGCGAGGGATCTA
GGTTGCGCGCTCCTTATGAGAATCTAATGCCTGATGATCTGAGGTGGAAC
AGTTTCATCCCGAAACCATCCCC
>rnd-1_family-33#LINE/L1 ( RepeatScout Family Size = 286, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAAAAATAGTTAGAAAGAATGAATAAGACCTAGTATTTGATAGCACAA
CAGGGTGACTATAGTCAATAATAACTTAATTGTACATTTTAAAATAACTA
AAAGAGTATAATTGGATTGTTTGTAACACAAAGGATAAATGCTTGAGGGG
ATGGATACCCCATTCTCCATGATGTGATTATTACGCATTGCATGCCTGTA
TCAAAACATCTCATGTACCCCATAAATATATACACCTACTATGTACCCAC
AAAAATT
>rnd-1_family-62#LINE/L1 ( RepeatScout Family Size = 132, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAGAAGAAACTTCATCAAAATTAAAAACTTNTCTGTGCATCCGAAAGACA
CTATCAAGAGAATGAAAAGACAACCCACAGANTGGGAGAAAATATTTGCA
AATCATATATCTGATAAAGGACTNGTATCCAGAATATATAAAGAACTCTT
ANAACTCAACA
>rnd-1_family-16#LTR/ERVL-MaLR ( RepeatScout Family Size = 589, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
ACAGAGGAAAGACCATGTGAAGACACAGGGAGAAGGCGGCCATCTGCAAG
CCAAGGAGAGAGGCCTCAGAAGAAACCAACCCTGCCGACACCTTGATCTC
GGACTTCCAGCCTCCAGAACTGTGAGAAAATAAATTTCTGTTGTTTAAGC
CACCCAGTCTGTGGTACTTTGTTATGGCAGCCCTAGCAAACTAATACA
>rnd-1_family-12#SINE/Alu ( RepeatScout Family Size = 813, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAATATATTTAAAAAATAANNTACTTNANGGCCGGGCGCGGTGGCTCA
CGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGNGGATCACTTGAG
GTCAGGAGTTCGAGACCA
>rnd-1_family-19#SINE/MIR ( RepeatScout Family Size = 493, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CTGTGTGACCTTGGGCAAGTTACTTAACCTCTCTGTGCCTCAGTTTCCTC
ATCTGTAAA
>rnd-1_family-73#LINE/L1 ( RepeatScout Family Size = 112, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TTAGGGCAGTGAAACTATTCTGTATGATACTATAATGGTGGATACATGTC
ATTATACATTTGTCAAAACCCATAGAATGTACAACACCAAGAGTGAACCC
TAATGTAAACTATGGACTTTGGGTGATAATGATGTGTCAATGTAGGTTCA
TCGATTGTAACAAATGTACCACTCTGGTGNGGGATGTTGA
>rnd-1_family-66#DNA/TcMar-Tigger ( RepeatScout Family Size = 119, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TAATACCGTATTTTTACTGTACCTTTTCTATGTTTAGATACACAAATACT
TACCATTGTGTTACAATTGCCTACAGTATTCAGTACAGTAACATGCTGTA
CAGGTTTGTAGCCTAGGAGCAATAGGCTATACCATATAGCCTAGGTGTGT
AGTAGGCTATACCATCTAGGTTTGTGTAAGTACACTCTATGATGTTCGCA
C
>rnd-1_family-57#LINE/L1 ( RepeatScout Family Size = 157, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
ACTGGAACTCTCATACATTGCTGGTGGGAATGTAAAATGGTACAGCCACT
TTGGAAAACAGTTTGGCAGTTTCTCANAAAGTTAAACATAGANTTACCAT
ATGACCCAGCAATTCCACTCCTAGGTAT
>rnd-1_family-26#LINE/L1 ( RepeatScout Family Size = 356, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GAACTNAAAACAGAACTACCATTCGACCCAGCAATCCCATTACTGGGTAT
ATACCCAAAGGAATATAAATCGTTCTACCATAAAGACACATGCACGCGTA
TGTTCATTGCAGCACTATTCACAATAGCAAAGACATGGAATCAACCTAAA
TGCCCATCAATGGTAGACTGGATAAAGAAAATGTGGTACATATACACCAT
GGAATACTATGCAGCCATAAAAAAGAACGAGATCATGTCCTTTGCAGGGA
CATGGATGGAGCTGGAGGCCATTATCCTCAGCAAACTAACGCAGGAACAG
AAAACCAAACACCGCATGTTCTCACTTATAAGTGGGAGCTGAACGATGAG
AACACATGGACACAGGGAGGGGAACAACACACACTGGGGCCTATGTGAGG
GTGGGGGGCGGGGGGAGGGAGAGCATCAGGAAAAATANCTAATGCGTGCT
GGGCTTAATACCTGGGTGACGGGNTGATCNGTGCAGCAAACCACCATGGC
ACACGTTTACCTATGTAACAAACCTGCACTCCTGCACATGTACCCCNGAA
CTTAAAGTAAAATAAAAATAAAAAAAAA
>rnd-1_family-4#LINE/L1 ( RepeatScout Family Size = 1496, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAGAAACAAAGAAATAGCTTCANCATCAACAAAAAGGACGTCCACTCAGA
GACCCCATCCGAAAGTCACCAACTACAAAGACCANAGGTAGATAAATCCA
CGAAGATGGGAAGAAACCAGCGCAAAAAGGATGAAAACACCAAAAACCAG
AACGCCTCTCCTCCTCCAAGGGATCACAACTCCTCACCAGCAAGGGAACA
AAGCTGGACGGAGAATGAGTNTGATGAATTGACAGAAGCAGGCTTCAGAA
GGTGGGTAATAACAAACTTCTCTGAGCTAAAAGAACATGTTCTAACCCAA
TGCAAAGAAACTAAGAACCTTGAAAAAAGGTTNGACGAAATGCTAACNAG
AATAANCAGCTTAGAGAAGAACATAAATGACTTGATGGAGCTGAAAAACA
CAGCACGAGAACTTCGCGAAGCATACACAAGTTTCAATAGCCGAATCGAC
CAAGCAGAAGAAAGGATATCAGAGATTGAAGATCAACTCAATGAAATAAA
ACGAGAAGGCAAGATTAGAGAAAAAAGAGTGAAAAGAAATGAACAAAGCC
TCCAAGAAATATGGGATTATGTGAAAAGACCTAATCTACGTTTGATNGGT
GTACCTGAATGTGACGGGGAGAATGAATCCAAGCTGGAAAACACTCTTCA
GGATATTATCCAGGAGAACTTCCCCAACCTAGCAAGGCAGGCCAACATTC
AAGTCCAGGAAATACAGAGAACACCACAAAGATATTCCTCAAGAAGAGCA
ACCCCAAGGCACATAATCGTCAGATTCACCAGGGTTGAAATGAAGGAAAA
AATGCTAAGGGCAGCCAGAGAGAAAGGTCGGGTTACCCACAAAGGGAAGC
CCATCAGACTCACAGCGGATCTCTCGGCAGAAACCCTACAAGCCAGAAGA
GAGTGGGGGCCAATATTCAACATCCTTAAAGAAAAGAACTTTCAACCCAG
AATTTCATATCCAGCCAAACTAAGCTTCATAAGCGAAGGAGAAATAAAAT
CCTTTACGGACAAGCAATTGCTGAGAGATTTCGTCACCACCAGGCCTGCC
TTACAAGAGCTCCTGAAAGAAGCACTAAACATGGAAAGGAACAACCAGTA
CCAGCCACTNCAAAAACGTACCAAATGGTAAAGACCATCGACACAATGAA
GAAACTGCATCAACTAACGGGCAAAACAACCAGCTAGCATCAAAATGGCA
GGATCAAATTCACACATAACAATATTAACCTTAAATGTAAATGGGCTAAA
TGCCCCAATCAAAAGACACAGACTGGCAAATTGGATAAAAAGTCAAGACC
CATCGGTGTGCTGTATTCAGGAAACCCATCTCACGTGCAAGGACACACAT
AGGCTCAAAATAAAGGGATGGAGGAAGATTTACCAAGCAAATGGAGAGCA
AAAAAAAAAAAAGCAGGAGTTGCAATCCTAGTCTCTGATAAAATAGACTT
TAAACCAACAAAGATCAAAAGAGACAAAGAAGGGCATTACATAATGGTAA
AAGGATCAATGCAACAAGAAGAGCTAACGATCCTAAATATATACGCACCC
AATACAGGAGCACCCAGATACATAAAGCAAGTTCTTAATGACCTACAAAG
AGACTTAGACTCCCACACAATAATAGTGGGAGACTTTAACACTCCACTGT
CAATATTAGACAGATCAACGAGACAGAAAATTAACAAGGATATCCAGGAC
TTGAACTCAGATCTGGACCAAGCGGACCTAATAGACATCTACAGAACTCT
CCACCCCAAATCCACAGAATATACATTCTTCTCAGCACCACATCGCACCT
ACTCTAAAATTGACCACATAATTGGAAGTAAATCACTCCTCAGCAAATGC
AAAAGAACGGAAATCATAACAAACAGTCTCTCAGACCACAGTGCAATCAA
ATTAGAACTCAGGATTAAGAAACTAACTCAGAACCGCACAACTTCATGGA
AACTGAACAACCGGCTCCTGAATGTCGACTGGATAAACAATGAAATGAAG
GCAGAAATAAAGATGTTCTTCGAAACCAACGAGAACGAAGACACAACGTA
CCAGAATCTCTGGGACACATTTAAAGCAGTGTCTAGAGGGAAATTTATAG
CAATAAATGCCCACATGAGAAGCGAGGAAAGATCTAAAATCGACACCCTA
TCATCAAAATTGAAAGAGCTAGAGGAGCAAGATCAAAAAAACTCAAAAGC
TAGCAGAAGACAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGATAG
AGACACAAAAAACCTTCAAAAAAAATCAATAAATCCAGGAGCTGGTTTTT
TGAAAAGATCAACAAAATAGACCACTAGCCAGACTAATAAAAAAGAAAAG
AGAAGAATCAAATAGATGCAATAAAAAACGATAAAGGGATATCACCACCG
ATTCCACAGAAATACAAACTACCATCAGAGATTACTACAAACAACTCTAT
GCACATAAACCAGTAAACCTGGAAGAAATGGATAAATTCCTGGACACTTG
CACCCTCCCAAGNCTAAACCAGGAAGAAGTCGAAACCCTGAATAGACCAA
TAACAAGGTCTGAAGTTGAGGCAGCAATTAATAGCCTACCAACCAAAAAA
AGCCCAGGTCCAGACGGGTTCACAGCCGAATTCTACCAGACGTACAAAGA
GGAGCTGGTACCATTCCTTCTGAAACTATTCCAAACAATACAAAAAGAGG
GAATCCTCCCCAANTCATTTTATGAGACCAACATCATCCTGATACCAAAA
CCCGGCAGAGACTCAACAAAAAAAGAAAACTTCAGGCCAATATCCATGAT
GAACATAGATGCAAAAATCTTCAATAAAATACTGGCAAACCGATTGCAAC
AGCACATCAAAAAGCTTATCCATCACGATCAAGTAGGCTTCATCCCGGGG
ATGCAAGGCTGGTTCAACATACGCAAGTCTATAAACGTAATCCACCACAT
AAACAGAACCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAGA
AGGCCTTCGACAAAATTCAACAGCCCTTTATGCTAAAAACTCTCAATAAA
CTAGGTATCGATGGAACGTATCTCAAAATAATAAAAGCTATTTACGACAA
ACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTT
TGAAATCTGGCACTAGACAAGGATGCCCTCTCTCACCACTCCTATTCAAT
ATAGTATTGGAAGTTCTAGCCAGAGCAATCAGGCAAGAAAAAGAAATAAA
GGGTATTCAATTAGGAAAGGAGGAAGTCAAATTGTCTCTATTTGCAGACG
ACATGATTGTATATTTAGAAGACCCCATCGTCTCAGCCCAAAATCTCCTN
AAACTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCA
GAAATCACAAGCATTCCTATACACCAATAACAGACTNAAAGAGAGCCAAA
TCANGAGCGAACTCCCATTCACAATTGCTACAAA
>rnd-1_family-77#DNA/hAT-Charlie ( RepeatScout Family Size = 101, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TAGAGCAGCGGTCCCCAACCTTTTTGGCACCAGGGACCGGTTTCGTGGAA
GACAATTTTTCCACGGACCGGGGTTGGGGGTGTGGGAGGGGATGGTTTCG
GGATGATTCAAGCGCATTACATTTATTGTGCACTTTATTTCTATTATTAT
TACATTGTAATATATAATGAAATAATTATACAACTCACCATAATGTAGAA
TCAGTGGGAGCCCTGAGCTTGTTTTCCTGCAACTAGACGGTCCCATCTGG
GGGTGATGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGA
GCGCGCAACCTAGATCCCTCGCATGCGCAGTTCACAATAGGGTTCGCGCT
CCTATGAGAATCTAATGCCGCCGCTGATCTGACAGGAGG
>rnd-1_family-38#LTR/ERVL-MaLR ( RepeatScout Family Size = 246, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CCCCCAAAATTCATATGTTGAAGTCCTAACCCCAGTACCTCAGAATGTGA
CCGTATTTGGAGATAGGGTCTTTACAGAGGTAATTAAGTTAAAATGAGGT
CATTAGGGTGGGCCCTAATCCAATATGACTGGTGTCCTTATAAGAAGAGG

>rnd-1_family-40#LINE/L1 ( RepeatScout Family Size = 236, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TTGTATATTTCAAAATAGCTAGAAGAGAGGATTTGGAATGTTCCCAACAC
AAAGAAATGATAAATGTTTGAGGTGATGGATATCCCAATTACCCTGATTT
GATCATTACACATTGTATGCATGTATCAAAATATCACATGTACCCCATAA
ATATGTACAATTATTATGTATCAATAA
>rnd-1_family-30#LINE/L1 ( RepeatScout Family Size = 300, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGTGATGAAAATGTTCTAAAATTGATTGTGGTGATGGTTGCACAACTCTG
TGAATATACTAAAAACCACTGAATTGTACACTTTAAATGGGTGAATTNTA
TGGTAT
>rnd-1_family-1#SINE/Alu ( RepeatScout Family Size = 3939, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGG
GCGGATCGCTTGAGNTCAGGAGTTCGAGACCAGCCTGGNCAACATGGCGA
AACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCACG
CGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCGGGAGAATCGCTTGAA
CCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACTCCAG
CCTGGGCGACAGAGCGAGACCCTGTCTCAAAAAAAAAAAAAAA
>rnd-1_family-2#SINE/Alu ( RepeatScout Family Size = 3188, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCGGGCGCGGTGGCTCANGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGGTGGATCACGAGGTCAAGAGATCGAGACCATCCTGGTCAACATGG
TGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGC
GCGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCCT
GAACCCAGGAGGCGGAGGTTGCGGTGAGCCGAGATCGCGCCATTGCACTC
CAGCCTGGGTAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAA
>rnd-1_family-41#DNA/hAT-Charlie ( RepeatScout Family Size = 230, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AGCATCAGCATCACCTGGGAGCTTGTTAGAAATGCAGANTCTCGGGCCCC
ACCCCAGACCTACTGAATCAGAA
>rnd-1_family-3#LINE/L1 ( RepeatScout Family Size = 2833, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CAATTAGGAAAGGAGGAAGTCAAATTGTCTCTATTTGCAGACGACATGAT
TGTATATTTAGAAGACCCCATCGTCTCAGCCCAAAATCTCCTTAAACTGA
TAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTGCAGAAATCA
CAAGCATTCCTATACACCAATAACAGACTAANAGAGAGCCAAATCANGAG
CGAACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGGAATAC
AACTAACAAAGGATGTAAAGGACCTCTTCAAGGAGAACTACAAACCACTG
CTCAAGGAAATAAGAGAGGACACAAACAGATGGAAAAACATTCCATGCTC
ATGGTTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAAGTAA
TTTATAGATTCAATGCTATCCCCATCAAGCTACCAATGACCTTCTTCACA
GAACTGGAAAAAACCACCTTAAACTTCATATGGAACCAAAAGAGAGCCCG
CATAGCCAAGACAATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCACGC
TACCTGACTTCAAACTATACTACAAGGCTACAGTAATCAAAACAGCATGG
TACTGGTACCAAAACAGAGATATAGACCAATGGAACAGAACAGAGGCCTC
GGAGGCAACGCCACACATCTACAACCATCTGATCTTTGACAAACCTGACA
AAAACAAGCAATGGGGAAAGGATTCCCTGTTTAATAAATGGTGTTGGGAA
AACTGGCTAGCCATGTGCAGAAAGCAGAAACTGGACCCCTTCCTGACACC
TTACACTAAAATTAACTCCAGATGGATTAAAGACTTAAACATAAGACCTA
ACACCATAAAAACCCTAGAAGAAAACCTAGGCAAAACCATTCAGGACATA
GGCATAGGCAAGGACTTCATGACTAAAACACCAAAAGCANTGGCAACAAA
AGCCAAAATAGACAAATGGGATCTAATTAAACTCCAGAGCTTCTGCACAG
CAAAAGAAACAATCATTAGAGTGAACCGGCAACCAACAGAATGGGAAAAA
TTTTTGCAATCTACCCATCTGACAAAGGGCTAATATCCAGAATCTACAAA
GAACCAAACAGATTTACGGGAAAAAATTTTTGCAATCTACCCATCTGACA
AAGGGCTAATATCCAGAATCTACAAAGAACTAAAACAGATTTACAAGAAA
AAAACAAACAAACCCATTCAAAAGTGGGCGAAGGATATGAACAGACACTT
TTCAAAAGAAGACATATATGAGGCCAACAAACATATGAAAAAATGCTCAT
CATCACTGGTCATTAGAGAAATGCAAATCAAAACCACATTGAGATACCAT
CTCACGCCAGTTAGAATGGCGATCATTAAAAAATCTGGAGACAACAGATG
CTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGAGT
GTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGAC
CTAGAAATAGAAATTCCATTTGACCCAGCAATCCCATTACTGGGTATATA
CCCAAAGGATTATAAATCGTTCTATTATAAAGACACATGCACACGTATGT
TCATTGCGGCACTGTTTACAATAGCAAAGACCTGGAACCAACCCAAATGC
CCATCGATGATAGACTGGACAAGGAAAATGTGGCACATATACACCATGGA
ATACTATGCAGCCATAAAAAACGATGAGTTCGTGTCCTTTGTAGGGACAT
GGATGAATCTGGAAACCATCATTCTCAGCAAACTGACACAAGAACAGAAA
ACCAAACACCGCATGTTCTCACTCATAGGCGGGTGTTGAACAATGAGAAC
ACATGGACACAGGGAGGGGAGCATCACACACTGGGGTCTGTTGGGGGGTG
GGGGCTAGGGGAGGGACAGCGGGGGGTGGGGAGGTTGGGGAGGGATAACA
TGGGGAGAAATGCCAGATGTAGGTGACGGGGGGATGGAGGCAGCAAACCA
CNNTGCCATGTGTGTACCTATGCAACAATCCTGCATGATCTGCACATGTA
CCCCAGAACCTAAAGTACAATAAAAAAAATGNTAAAAA
>rnd-1_family-27#LTR/ERVL-MaLR ( RepeatScout Family Size = 316, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAAATGGTTTCGTGGGCCGGGCCCAGGGCCCCGCTGCTNTGTGCAGCC
TCGGGACTTGGTGCCCTGCGTCCCAGCCGCTCCAGCCGTGGCTAAAAGGG
GCCAAGGTACAGCTCGGGCCGTNGCTTCAGAGGGTGCAAGCCCCAAGCCT
TGGCAGCTTCCACGTGGTGTTGAGCCTGCGGGTGCACAGAAGTCAAGAAT
TGAGGTTTGGGAACCTCCGCCTAGATTTCAGAGGATGTATGGAAACGCCT
GGATGTCCAGGCAGAAGTCTGCTGCAGGGGCGGAGCCCTCATGGAGAACC
TCTGCTAGGGCAGTGCGGAAGGGAAATGTGGGGTCGGAGCCCCCACACAG
AGTCCCCACTGGGGCACTGCCTAGTGGAGCTGTGAGAAGAGGGCCACCGT
CCTCCAGACCCCAGAATGGTAGATCCACCGACAGCTTGCACCGTGCGCCT
GGAAAAGCCGCAGACACTCAACGCCAGCCCGTGAAAGCAGCCGGGAGGGG
GGCTGTACCCTGCAAAGCCACAGGGGCGGAGCTGCCCAAGGCCATGGGAG
CCCACCTCTTGCATCAGCGTGACCTGGATGTGAGACATGGAGTCAAAGGA
GATCATTTTGGAGCTTTAAGATTTGACTGCCCCGCTGGATTTCGGACTTG
CATGGGGCCTGTAGCCCCTTTGTTTTGGCCAATTTCTCCCATTTGGAATG
GNTGTATTTACCCAATGCCTGTACCCCCATTGTATCTAGGAAGTAACTAA
CTTGCTTTTGATTTTACAGGCTCATAGGCGGAAGGGACTTGCCTTGTCTC
AGATGAGACTTTGGACTGTGGACTTTTGAGTTAATGCTGAAATGAGTTAA
GACTTTGGGGGACTGTTGGGAAGGCATGATTGGTTTTGAAATGTGAGGAC
ATGAGATTTGGGAGGGGCCAGGGGCGGAATGATATGGTTTGGCTGTGTCC
CCACCCAAATCTCATCTTGAATTCCCACGTGTCGTGGGAGGGACCCGGTG
GGAGGTAATTGAATCATGGGGGCGGTCTTTCCCGTGCTGTTCTCGTGATA
GTGAGTAAGTCTCACGAGATCTGATGGTTTTA
>rnd-1_family-53#LINE/L1 ( RepeatScout Family Size = 168, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TGGTTGCACAACAATGTGAATGTACTTAACGCCACTGAACTGTACACTTA
AAAATGGTTAAAATGGTAAATTTTATGT
>rnd-1_family-28#LINE/L1 ( RepeatScout Family Size = 311, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGGGAAATGGGGAGATGTTGGTCAAAGGGTACAAAGTTTCAGTTAGACAG
GAGGAATAAGTTCTGGAGATCTATTGTACAGCATGGTGACTATAGTTAAT
AATAATGTATTGTATACTTGAAANTTGCTAAGAGA
>rnd-1_family-25#LINE/L1 ( RepeatScout Family Size = 370, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TCAAACTAAACATANACTTACCATATGACCCAGCAATTCCACTCCTAGGT
ATTTACCCAAGAGAAATGAAAACNTATGTCCACACAAAAACTTGTACACG
AATGTTCATAGCAGCNTTATTCATAATAGCCAAAAACTGGAAACAACCCA
AATGTCCATCAACNGGTGAATGGATAAACAAANTGTGGTATATCCATACA
ATGGAATACTA
>rnd-1_family-71#DNA/TcMar-Tigger ( RepeatScout Family Size = 115, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAACAATACAGTATAACAACTATTTACATAGCATTTACATTGTATTAGGT
ATTATAAGTAATCTAGAGATGATTTAAAGTATACGGGAGGATGTGCGTAG
GTTATATGCAAATACTACGCCATTTTATATAAGGGACTTGAGCATCCGCG
GATTTTGGTATC
>rnd-1_family-31#SINE/Alu ( RepeatScout Family Size = 295, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTG
AAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCGCG
CGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAA
CCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCGTTGCACTCCAG
CCTGGGCGACAAGAGCGAAACTCTGTCTCAAAAAAAAAAA
>rnd-1_family-21#LINE/L1 ( RepeatScout Family Size = 426, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAGAAAAAAACAACCCNATTAAAAAATGGGCAAAGGACNTGAACAGACAT
TTCTCNAAAGAAGACATACAAACGGCCAATAAGCATATGAAAAGATGCTC
AACATCACTAGTCATTAGGGAAATGCAAATCAAAACCACAATGAGATACC
ACCTCACACCNGTTAGAATGGCTATNATTAAAAAAATCAGAAACAACAAA
TGCTGGCGAGGATGTGGAGAAACNGGAACNCTCGTACACTGCTGGTGGGA
ATGTAAANTGGTACA
>rnd-1_family-8#SINE/Alu ( RepeatScout Family Size = 918, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGG
TGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGCA
CGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTG
AACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCC
AGCCTGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAA
>rnd-1_family-60#SINE/Alu ( RepeatScout Family Size = 133, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GCTGGCCGGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGC
CGAGGCGGGCGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGGCAA
CATGGTGAAACCCCGTCTCTACTAAAA
>rnd-1_family-67#SINE/Alu ( RepeatScout Family Size = 118, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG
GCGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCC
GATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAG
CGGGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAA
ACGGAGCAGGTCAAAACTCCCGTGCTGATCAGTAGTGGGATCGCGCCTGT
GAATAGCCACTGCACTCCAGCCTGGGCAACANAGCGAGACCCCGTCTCTA
AAAAAAAAAAAAAAAA
>rnd-1_family-20#SINE/Alu ( RepeatScout Family Size = 490, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCTGGCCAACATGG
TGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGC
GCGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCCT
GAACCCGGGAGGCGGAGGTTGCGGTGAGCCGAGATCGCGCCATTGCACTC
CAG
>rnd-1_family-36#SINE/Alu ( RepeatScout Family Size = 252, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGGTGGATCACGAGGTCAAGAGATCGAGACCATCCTGGTCAACATGG
TGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGT
>rnd-1_family-39#LTR/ERVL-MaLR ( RepeatScout Family Size = 240, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TGATATGGTTTGGATGTTTGTCCCCTCCAAATCTCATGTTGAAATGTGAT
CCCCAGTGTTGGAGGTGGGCCTGGTGGGAGGTGNTTGGATCATGGGGGCG
GATCCCTCATGAATGGCTTAGCGCCATCCCCTTGGTGATGAGTGAGTTCT
CGCTCTGTTAGTTCNCGCGAGATCTGGTTGTTTAAAA
>rnd-1_family-69#LTR/ERVL ( RepeatScout Family Size = 117, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TTCAGCTTTTGGACTCTNGGACTTACACCAGTGGTTTGCCAGGGGCTCTC
GGGCCTTCGGCCNCAGACTGAAGGCTGCACCGTCGGCTTCCCTGNTTTTG
AGGCTTTGGGACTCGGACTGACGGCTCTTCCTTGCTCCTCAGCTTGCAGA
CGGCCTATTGTGGGACTTCNCCTTGTGATCGTGTGAGCCAATNCTCCTTA
ATAAACTCCCTTTTATATATATATTCTATCATATATCCTATTAGTTCTGT
CCCTCTAGAGAACCCT
>rnd-1_family-35#LTR/ERVL-MaLR ( RepeatScout Family Size = 264, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TTGATCTTGGACTTCCCAGCCTCCAGAACTGTGAGAAATAAATTTCTGTT
GTTTATAAGCCACCCAGTCTATGGTATTTTGTTATAGCAGCCCGAACGGA
CTAAGACA
>rnd-1_family-72#DNA/TcMar-Tigger ( RepeatScout Family Size = 115, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CTATACCATCTAGGTTTGTGTAAGTACACTCTATGATGTTCGCACAACGA
CGAAATCGCCTAACGACGCATTTCTCAGAACGTATCCCCGTCGTTAAGCG
ACGCATGACT
>rnd-1_family-51#LINE/L1 ( RepeatScout Family Size = 176, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TTGTAGGCGGTGAGGTGTTCTGGTTTCGGGTGTTTTCCTCCTTTTTGCGC
TGGTTTCTTCCCATCTTTGTGGATTTATCCACCTGTCGTCTGAGTAGTTG
CTGATTTTTCGATTGGGTCTCTGAGTAGAGGCCCAGATTGTTGATGATGA
AGTATTTCTGTTTCTTAGTTTTCCTTCTAACAGTCTAGCCCCTCTGCTGT
AAGACTGCTGAGGTGCACTCCGGGCCCTGCTTGCCTGGGGTACACCTGTA
GCAGCTGCGGAACAGTGAGGGATGCTACCAGTTTCTTCTTCTATCTTTGT
CCCAGAATGATGCCCGCCAAATGTCAGTCTGATCAGTCCTTTTTGAGGTG
ATTCTTTGGGTATACGGGGGTCAGGGAGCTGCTTGAGGAGACGATCTGTA
CTTTATAGGAGCTCAAGTGCTGNTCTGTGAGCTCCGTTGTTCATTCAGTG
TTGCTAGGCAAGTACGTTTAAGTCTGTTGCGGCAGAACTCATGAAACCGG
TTTTTTCCTCAGATGCTCTGTCTCGGGGAGTTAGGGCTTTATTTGTGAGT
ATCCGTTGCGCTGTCCTGCCCAGCTAGGAGGCAGTCTAGTCACTATTTGG
CTGCCGAGGCTCCGCCCTGCTGGCGTGAGGTCCGCCCTTTTGCTGTGGGC
TCCGTCCTGCTGTTTTGGGCTCCGCCCTGCTGACGTAGGCTCCGCCCTGC
TGATGTGGGCTCTGCCCTGTTGGCGGAGTCTCTCTGTTATTGCGGGTTGC
CTCGGCAACGGCTGACTGCGTCAGCAATGGGCGGGTACCTCAGTAGGGGC
NGAAGCTCTCGGCAATGGCGGACGCCCCTCCCCCACCGAGCTGCACAGTC
GTGGGTTCAGCTGTTCCCGCAGTGGAACTCTCAACCCCGGGCACTCCGAA
TCGCCGTATTGCTTGTCCCTGTGGGGGTGGGACCCGTCGAGCCTGATCAC
TTGGCTCCCTGCCTCCGAGCCTTTTTGCTTTTTTTTTTTTTTTTTTTAAG
TTGTAGGGTTGACTCTCTCCCAGGTGCCTCAGCCGCCGGCCGAAAGGGCA
CCGGGATCTGTGTGATTTCCCGTGCAGCGACCCGCTGCGCTGGTTCACAA
TTCACCTCCCAGAAATCTCCTGGTCTGGTTCACCGTCCAAAACCCGTTCA
ATCAGATGAACATGGCAATCTGCCCTCCCAAGTCTCAAATTGCCGGTTTA
ACAGGGCGCCCAGACCCGTGTGTTTTGTGCGCCGTGCCGCTGCGCTGCGG
CGCCGGCTGCCTGGCCGCGCCAGCGGAGAGCGCTGCGCTTGNGTCCTGCG
TGCCTCTTACACCTGGGCTTTTCCCCCGCTCTGTGGGCTATAAAGATCCG
TCTGGAAATGCGGTGTTTGAACTCACCCTCTGCGTCTTGACTGAGAGCTG
CAGTCGTGAGTTGCTTCTAGAGCGCCATCTTCCTCCCTCCC
>rnd-1_family-79#LINE/L1 ( RepeatScout Family Size = 100, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TTAACCAAGGAGGTGNAAGACCTNTACACTGAAAACTACAAAACATTGNT
GAAAGAAATTAAAGAAGACCTTAAATAAATGGAAAGATATNCCATGTTCA
TGGATTGGAAGACTTAATATTGTTAAGATGTCAATNCTNCCCAAANTGAT
CTACAGATTCAATGCAATCCCNATCAAAATCCCAATGGACCNTTTTTNTA
GAAATAGAAAA
>rnd-1_family-17#LTR/ERVL-MaLR ( RepeatScout Family Size = 496, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GATATGGTTTGGCTGTGTCCCCACCCAAATCTCATCTTGAATTGTAGCTC
CCATAATTCCCACGTGTCGTGGGAGGGACCCGGTGGGAGGTAATTGAATC
ATGGGGGCGGTTTCCCCCATGCTGTTCTCGTGGTAGTGAATAAGTCTCAC
GAGATCTGATGGTTTTATAAGGGGNNNCCCCTTTCGCTTGGCTCTCATTC
TCTCTTGCTGCCGCCATGTAAGACGTGCCTTTCGCCTTCCGCCATGATTG
TGAGGCCTCCCCAGCCACGTGGAACTGTGAGTCCATTAAACCTCTTTTTC
TTTATAAATTACCCAGTCTCGGGTATGTCTTTATCAGCAGCGTGAAAACG
GACTAATACA
>rnd-1_family-7#SINE/Alu ( RepeatScout Family Size = 1199, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG
GCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGT
GAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTGGTGGCGC
ACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGA
ACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCA
GCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAA
>rnd-1_family-37#LINE/L1 ( RepeatScout Family Size = 250, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAAAAAANAACAAGTGTTGGCGAGGATGTGGAGAAANNGGAACCCTTG
TACACTGTTGGTGGGAATGTAAANTGGTACAGCCACTATGGAAAACAGTA
TGGNGGTTCCTCAAAAAATTAAAAATAGAACTACCATATGATCCAGCAAT
CCCACTNCTGGGTATATACCCAAAAGAAATGAAATCAGTATNTCGAAGAG
ATATCTGCACNCCCATGTTCATTGCAGCATTATTCACAATAGCCAAGATA
TGGAANCAACCTAA
>rnd-1_family-29#SINE/Alu ( RepeatScout Family Size = 305, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GCCGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG
GCGGGAGGATCGCTTGAGNCCAGGAGTTCGAGACCAGCCTGGGCAACATA
GTGAGACCCCGTCTCTACAAAAAAT
>rnd-1_family-0#SINE/Alu ( RepeatScout Family Size = 9847, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGGTGGATCACGAGGTCAAGAGATCGAGACCATCCTGGTCAACATGG
TGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGC
GCGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCCT
GAACCCAGGAGGCGGAGGTTGCGGTGAGCCGAGATCGCGCCATTGCACTC
CAGCCTGGGTAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA
AAA
>rnd-1_family-48#LTR/ERVL ( RepeatScout Family Size = 195, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TGTGATGGTTAATTTTATGTGTCAACTTGACTGGGCCACGGGGTGCCCAG
ATATTTGGTNAAACATTATTCTGGGTGTGTCTGTGAGGGTGTTTCCGGAT
GAGATTAACATTTGAATCGGTAGACTGAGTAAAGCAGATTGCCCTCCCCA
ATGTGGGTGGGCNTCATCCAATCNGTTGAAGGCCTGAATAGAACAAAAAG

>rnd-1_family-55#LINE/L1 ( RepeatScout Family Size = 162, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TACATATATACNATGGAATACTACTCAGCCATAAAAAGGAATGAAATAAT
GGCATTCGCAGCAACCTGGATGGAACTGGAGACTATTATTCTAAGTGAAG
TAACTCAGGAATGGAAAACCAAACATCGTATGTTCTCACTCATAAGTGGG
AGCTAAGCTATGAGGACGCAAAGGCATAAGAATGATACAATGGACTTTGG
GGACTCGGGGGAAAGGGTGGGAGGGGGTGAGGGATAAAAGACTACANATT
GGGTACAGTGTACACTGCTCGGGTGATGGGTGCACCAAAATCTCAGAAAT
CACCACTAAAGAACTTACTCATGTAACCAAACACCACCTGTTCCCCAAAA
ACCTATTGAAATAAAAAATAAAATAAAATTTAAAAA
>rnd-1_family-47#DNA/hAT-Charlie ( RepeatScout Family Size = 203, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TACAACGGCAGAGTTGAGTAGTTGCGACAGAGACCGTATGGCCCGCAAAG
CCTAAAATATTTACTATCTGGCCCTTTACAGAAAAAGTTTGCCGACCCCT
GNTCTA
>rnd-1_family-70#LINE/L1 ( RepeatScout Family Size = 117, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TAGTATATCCAGCGAAANTATCCTTCAAAATGAAGGAGAAATAAAGACTT
TCCCAGACAAACAAAAGCTGAGGGAATTCGTCACCACCAGACCTGCCCTA
CAAGAAATGCTAAAGGGAGTTCTTCAANCNGAAAGAAAAGGACGTTAATG
AGCAATAAAAAATCATA
>rnd-1_family-50#DNA/hAT-Charlie ( RepeatScout Family Size = 192, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CTGTTTTTGTAAATAAAGTTTTATTGGAACACAGCCACGCCCATTCGTTT
ACGTATTGTCTATGGCTGCTTTCGCGCTACAACGGCAGAGTTGAGTAGTT
GCGACAGAGACCGTATGGCCCGCAAA
>rnd-1_family-59#DNA/TcMar-Mariner ( RepeatScout Family Size = 147, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGGGGCTGTCCTGTGCATTGTAGGATGTTTAGCAGCATCCCTGGCCTCTA
CCCACTAGATGCCAGTA
>rnd-1_family-34#LTR/ERVL-MaLR ( RepeatScout Family Size = 273, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CCCACTCTCTCTCTCTTGCTCCTGCTCTCGCCATGTGACGTGCCTGCTCC
CCCTTCGCCTTCCGCCATGATTGNAAGCTTCCTGAGGCCTCCCCAGAAGC
CGAGCAGATGCCGGCGCCATGCTTCCTGTACAGCCTGCAGAACCGTGAGC
CAATTAAACCTCTTTTCTTTATAAATTACCCAGTCTCAGGTATTTCTTTA
TAGCAATGCAAGAACGGACTAATACA
>rnd-1_family-23#SINE/Alu ( RepeatScout Family Size = 386, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAAATTAGCCGGGCGTGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGG
GAGGCTGAGGCGGGAGGATCGCTTGAGCCCGGGAGNTCGAGGCTGCAGTG
AGCTATGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACCCT
GTCTCAAAAAAAAAAAA
>rnd-1_family-10#LINE/L1 ( RepeatScout Family Size = 882, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
CAAAAGAAGACATTTATGCGGCCAACAAACATATGAAAAAAAGCTCATCA
TCACTGGTCATTAGAGAAATGCAAATCAAAACCACATTGAGATACCATCT
CACGCCAGTTAGAATGGCGATCATTAAAAAATCAGGAGACAACAGATGCT
GGAGAGGATGTGGAGAAATAGGAACGCTTTTACACTGTTGGTGGGAGTGT
AAATTAGTTCAACCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCT
AGAANTAGAAATACCATTTGACCCAGCAATCCCATTACTGGGTATATACC
CAAAGGATTATAAATCATTCTATTATAAAGACACATGCACACGTATGTTC
ATTGCGGCACTGTTTACAATAGCAAAGACTTGGAACCAACCCAAATGCCC
ATCAATGATAGACTGGATAAAGAAAATGTGGCACATATACACCATGGAAT
ACTATGCAGCCATAAAAAAGGATGAGTTCATGTCCTTTGCAGGGACATGG
ATGAAGCTGGAAACCATCATTCTCAGCAAACTGACACAAGAACAGAAAAC
CAAACACCGCATGTTCTCACTCATAAGTGGGTGTTGAACAATGAGAACAC
ATGGACACAGGGAGGGGAACATCACACACCGGGGCCTGTTGGGGGGTGGG
GGGCTAGGGGAGGGATAGCAGGGGGTGGGGAGATTGGGGAGGGATAACAT
TGGGAGAAATACCTAATGTAGATGACGGGGNGATGGATGCAGCAAACCAC
CATGGCACGTGTATACCTATGTAACAAACCTGCACGNTCTGCACATGTAC
CCCAGAACTTAAAGTATAATTTAAAAAAAAAAAA
>rnd-1_family-15#LTR/ERVL-MaLR ( RepeatScout Family Size = 598, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GAATGTTTGTGTCCCCCCCAAAATTCATATGTTGAAACCTAACCCCCAAT
GTGATGGTATTAGGAGGTGGGGCCTTTGGGAGGTGATTAGGTCATGAGGG
CGGAGCCCTCATGAATGGGATTAGTGCCCTTATAAAAGAGGCCCCAGAGA
GCTCCCTTGCCCCTTCCGCCATGTGAGGACACAGCGAGAAGACGGCCGTC
TGCGAACCAGGAAGCGGGCCCTCACCAGACACCGAATCTGCCGGCGCCTT
GATCTTGGACTTCCCAGCCTCCAGAACTGTGAGAAATAAATTTCTGTTGT
TTATAAGCCACCCAGTCT
>rnd-1_family-9#LINE/L1 ( RepeatScout Family Size = 896, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AAAAAAATTAAAAATAGAACTACCATATGATCCAGCAATCCCACTTCTGG
GTATATATCCAAAGGAANTGAAATCAGNATCTCGAAGAGATATCTGCACT
CCCATGTTCATTGCAGCATTATTCACAATAGCCAAGATATGGAANCAACC
TAAGTGTCCATCGACGGATGAATGGATAAAGAAATGTGGTATATACACAC
AATGGAATATTATTCAGCCTTAAAAAAGAAGGAATCCTGNCATTTGCGAC
AACATGGATGAACCTGGAGGACATTATGCTAAGTGAAATAAGCCAGNCAC
AGAAAGACAAATACTGCATGATCTCACTTATATGTGGAATCTAAAANAGT
CAAACTCATAGAAGCAGAGAGTAGAATGGTGGTTGCCAGGGGCTGGAGGG
G
>rnd-1_family-11#SINE/Alu ( RepeatScout Family Size = 831, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
TCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC
CGAGGCGGGCGGATCACTTGAGNTCAGGAGTTCGAGACCAGCCTGGNCAA
CATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCGTGG
TGGCACGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATT
GCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATCGCGCCACTGC
ACTCCAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAA
>rnd-1_family-45#LINE/L1 ( RepeatScout Family Size = 215, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AGAACAGTNTGGAGGTTCCTCAAAAAACTAAAAATAGAACTACCATATGA
TCCAGCAATCCCACTGCTGGGTATATACCCAAAAGAAAGGAAATCAGTAT
ATCGAAGAGATATCTGCACTCCCATGTTTATTGCAGCACTATTCACAATA
GCCAAGATNTGGAANCAACCTAAGTGTCCATCAACAGATGAATGGATAAA
GAAAATGTGGTACATATACACAATGGAGTACTATTCAGCCATAAAAAGAA
TGAGATCCTGTCATTTGCAACAACATGGATGGAACTGGAGGTCATTATGT
TAAGTGAAATAAGCCAGGCACAGAAAGACAAACATCGCATGTTCTCACTT
ATNTGTGGGAGCTAAAAATTAAAACAATTGAACTCATGGAGATAGAGAGT
AGAANGATGGTTACCAGAGGCTGGGAAGGGTAGTGGGG
>rnd-1_family-18#SINE/Alu ( RepeatScout Family Size = 495, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
AGCCGGGCGCGGTGGCTCACGCCTGTAGTCCCAGCTACTTGGGAGGCTGA
GGCGGGAGGATCGCTTGAGCCCAGGAGTTCGAGGCTGCAGTGAGCTATGA
TCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACCCTGTCTCTAA
AAAAAAAAAANAAA
>rnd-1_family-6#SINE/Alu ( RepeatScout Family Size = 1220, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGGTGGATCACGAGGTCAAGAGATCGAGACCATCCTGGTCAACATGGTGA
AACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGGTGGCGCG
TGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCCTGAA
CCCAGGAGGCGGAGGTTGCGGTGAGCCGAGATCGCGCCATTGCACTCCAG
CCTGGGTAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAA
>rnd-1_family-22#SINE/Alu ( RepeatScout Family Size = 394, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG
GCGGGAGGATCGCTTGAGGCCAGGAGTTCGAGACCAGCCTGGGCAACATA
GCGAGACCCCGTCTCTACAAAAAAA
>rnd-1_family-5#SINE/Alu ( RepeatScout Family Size = 1448, Final Multiple Alignment Size = 100, Localized to 2976 out of 4939 contigs )
GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGG
TGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGC
GCGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTT
GAACCCGGGAGGCGGAGGTTGCGGTGAGCCGAGATCGCGCCACTGCACTC
CAGCCTGGGCAACAAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAA
AAAA
>rnd-1_family-32#SINE/MIR ( RepeatScout Family Size = 290, Final Multiple Alignment Size = 99, Localized to 2976 out of 4939 contigs )
ACTTAACCTCTCTGAGCCTCAGTTTCCTCATCTGTAAAATGGGGATAATA

>rnd-1_family-75#SINE/Alu ( RepeatScout Family Size = 103, Final Multiple Alignment Size = 99, Localized to 2976 out of 4939 contigs )
TTCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAG
GCTG
>rnd-1_family-58#SINE/Alu ( RepeatScout Family Size = 149, Final Multiple Alignment Size = 99, Localized to 2976 out of 4939 contigs )
ACTAAAAATACAGAAAATTAGCCGGGCACGGTGGCTCACGCCTGTAATCC
CAGCACTTGGGAGGCCGAGGCGGGAGGATCGCTTGAGCCCAGGAGGCGGA
GGTTGCGGTGAGCTGAGATCGCGCCACTGCACTCCCAGCACT
>rnd-1_family-64#LTR/ERVL-MaLR ( RepeatScout Family Size = 123, Final Multiple Alignment Size = 99, Localized to 2976 out of 4939 contigs )
TGAGATGGGGAGATTATCCTGGATTATCCGGGTGGGCCCAATGTAATCAC
AAGGGTCCTTATAAGAGAGA
>rnd-1_family-14#SINE/Alu ( RepeatScout Family Size = 754, Final Multiple Alignment Size = 98, Localized to 2976 out of 4939 contigs )
CTAAAAATATACAAAAAATTNNNGGCCGGGCGCGGTGGCTCACGCCTGTA
ATCCCAGCACTTTGGGAGGCCGAGGCGGGNGGATCACTTGAGNCCAGGAG

>rnd-1_family-81#LTR/ERVL-MaLR ( RepeatScout Family Size = 98, Final Multiple Alignment Size = 98, Localized to 2976 out of 4939 contigs )
CTGGCACCTTGATCTTGGACTTCCCAGCCTCCAGAACTGTGAGAAATAAA
TTTCTGTTNTTTATAAGTTACCCAGTCTATGGTATTTTGTTATAGCAGCC
CGAACAGACTAAGACA
>rnd-1_family-80#LINE/L1 ( RepeatScout Family Size = 98, Final Multiple Alignment Size = 97, Localized to 2976 out of 4939 contigs )
AAAAGGCTACATACTGTATGATTCCANTTATATGACATTCTGGAAAAGGC
AAAACTATAGAGACAGNAAANAGATCAGTGGTTGCCAGGGTTGG
>rnd-1_family-74#LINE/L1 ( RepeatScout Family Size = 112, Final Multiple Alignment Size = 97, Localized to 2976 out of 4939 contigs )
AAATAAATAAATAAATAAATAAAAAGCAGGAGNTGCAACTCTCGTATCGG
GTAAAATAGATTTTAAAGCAACAAAGATACAGTGGTAAAAGGATCAATGC
AACAACAAGAGCTAACGATCCTAACACCCAGATACATAGAGACTTAGATT
CAATGAGACAGAAAATTAATAAGGATATCAAGGACTCGAACTCAGATCCG
GAACAAGTAAACTTAATAAATATTTACAGAGCTCTCCACTTCAAATACAC
AAAATATACATTCTTGTCAATACCACATCACACCTACTCATAGGTTTAAA
TGAAACATTGATTGGTCATTATTAATACCCATTTTTTTTCAGAATAAAGC
AATATTTCCGTTCACCCTCCCTCTTTCTCTTCCTCTTTCTTCCTCTCCTT
TACTCATTTTTTTTTCTTTCTTTCCTTCTCTCAAAAAAAGAAAGAAATCA
ACTTGTAAACCTCTAGATCCAGGTCGGCAATGTCTCTCTCATTGCTTGAT
TTCCTTCCTTCCCTTCCCTCCCTCCCTCCCTTCCTCCCTTCCTCCCTTCC
TTCCTTCCTTCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTTCCTCCCTT
CCTCCCTTCCT
>rnd-1_family-49#SINE/Alu ( RepeatScout Family Size = 192, Final Multiple Alignment Size = 96, Localized to 2976 out of 4939 contigs )
TCTCATTACAAATAAATGAAAAATGGGCCGGGCGCGGTGGCTCACGCCTG
TAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACTTGAGGTCAGG
AGTTCGAGACCAGCCTGGCCAACAT
>rnd-1_family-82#LTR/ERVL-MaLR ( RepeatScout Family Size = 94, Final Multiple Alignment Size = 94, Localized to 2976 out of 4939 contigs )
ATTAGGGTGGGCCCTAATCCAATATGACTGGTGTCCTTATAAGAAGGGGA
AATTTGGACACACAGAGACACACA
>rnd-1_family-83#LINE/L1 ( RepeatScout Family Size = 93, Final Multiple Alignment Size = 93, Localized to 2976 out of 4939 contigs )
AAAAAAAAAGCAGGAGTTGCAACTCTCGTCTCTGACAAAATAGACTTTAA
TAGCAACAAAGACCAAAAGAGACAAAGAAGGACATTACATAATGGTAAAA
GGATCAATGCAACAAGAGGAGCCAACGATCNTAAATATATATGCACCCAA
TATAGGAGCACCCAGATACATAAGACAAGTTCTTAATGACTTATAAAGAG
ACTTGGACTCCCGCACAATAATAGCGGGAGACTTTGACACCACATTGTTA
ATATTCGACGGATCAACGAGACAGAAAATTAACAGGGACATCCANGACTT
GAACTCAGACCTGGAACAAGTAAACTCAGTGAACATTTATAGAACTCTCC
ACCCCAGGTCCACAGAACATACATTTTTCTCAGTATCACATCACACCTAT
TTTGAAAGTGACCACATAATTGGAAGTAAATCACTCTTCAGCANTTGCAT
AGCATTTCACAGGTTTAAATGAAATATTGGTTGGCTGCTTGTTTGTTATT
TTCTTCCCTTATTCCTTCCTGTCTCCGCTGTTAAGCACAATTATCGGCAT
AAAAGAGGTTTTTAATACCTATTTTTAGACTGCACTCCAGCCTGGGCAAC
AGAGCAAGACTCCCGTTCTCTCTCCCTCTTTCTCTTTCTCTTTCTTTCTC
TCTTT
>rnd-1_family-84#LINE/L1 ( RepeatScout Family Size = 92, Final Multiple Alignment Size = 92, Localized to 2976 out of 4939 contigs )
AAATTGATCTATAGATTCAATGCAATCCCAATCAAAATCCTCAGCAGGTN
TTTTTTGTAGAAATTGACAAGCTGATTCTAAAATTTATATGGAAATGCAA
AGGACCTAGAATAGCCAAAACAATCTTGAAAA
>rnd-1_family-86#LTR/ERVL-MaLR ( RepeatScout Family Size = 91, Final Multiple Alignment Size = 91, Localized to 2976 out of 4939 contigs )
TTGCTGGCTTTGAAGATGGAGGAAGGGGCCACGAGCCAAGGAATGCGGGC
GGCCTCTAGAAGCTGGAAAAGGCAAGGAAA
>rnd-1_family-88#LINE/L1 ( RepeatScout Family Size = 89, Final Multiple Alignment Size = 89, Localized to 2976 out of 4939 contigs )
TGGAGGAGCCCCACGGGTCGCCAGCGCGACTCTTGTGGCCGGCGCAGCGG
TTTTGCCGGCGCCTCGGCGCGGCAGCTCTTGGTGCAGAGTAAACGGGACT
GGTTCCCCTTCTGACCGACGTTTGGAGCTCCGGGAAGGCAGAGTCGCCTA
TTACGGACTCAAGAAGGAAGCCAGACCGGAGATTCCCGGGCAGAAGAGCA
CCATCAGTCTTAACGCCGCTGTTTTGGCCGGCGCAGTGGGTTGCTCGGAT
TCCGGCGCTGGGAATCAACAAGTTGGACGTCCACTCAGAGACCTAATTNG
AAAGNCGGTAATTGCAAAGACGACAGGTGGATAAATTTACAACGANGGGA
AGAAACCAGCNTAAAAAGGCTGAGAATACCCAAAATCAGAACGCCTCTCC
CTCTACAGGGGATCACAGTTCCTCATCAGCAANGGAACAAGGCCTGATGG
AGAANGAGTGCGTCCCATTAACAGAATTAGGCTTCAGAAGGTGGATGATA
AGAAACTTCTGNGAGTTAAAAGAACNTGTTCTAGCCCAATGTAAAGAAAC
TAAGAACTTTGAAAAAAGGTTTGACGAAATNCTAACGAGAATAGACAATN
TAGAGAGGAATATAAGTGAATTAACGGAACTGAAGAATACAATACGAGAA
CTCCGCGAAGTATGCACAGGTTTNAACAGCCGAATTGATCAAGCAGAAGA
AAGGATATCAGAGGTCGAAGACCAACTTAATGAAATAAAACGAGAAGACA
AGANTAGAGAAAAAAGGATAAAAAGGAATGAGCAAAGTCTCCAAGAAATA
TGGGACTATGTGAAAAGACCTAATTTACGTTTGATAGGTGTACCTGAATG
CGACGAAGAGAATGAATCCAAGCTGGAAAATACTCTTCAGGATATTATTC
AGGAAAACTTTCCTAACCTAGCAAAGCAGGACAATATTCAACCCCAGGTA
ATACAGAGAACACCACAAAGATATTCCTCAAGAAGAGCAACCCCAAGGCA
CATAATCGTTAGATTCACCAGGGTTGAAATGAAGGAGAAAATACTAAGGG
CAGC
>rnd-1_family-89#LINE/L1 ( RepeatScout Family Size = 88, Final Multiple Alignment Size = 88, Localized to 2976 out of 4939 contigs )
AGGGCAAATCTAAGAGTTATTGGCCTTAAAGAGGAGGTAGAGAAAGAGAN
AGGGGTAGAAAGTTTATTCAAAGAAATAATAGCNGAAAACTTCCCAAACC
TAGAGAAAGATATNAATATCCAGGTACAAGAAGGTCANAGAACACCAAGC
AGATTTAACCCAAAGAAGACTACCCCAAGGCATATNATAATCAAACTCCC
AAAGGTCAAAGACAAAGAAAGAATCCTAAAAGCAGCAAGAGAAAAGAAAC
AAATNACATACAANGGAGCTCCAATACGNCTGGCAGCAGACTTCTCAGCG
GAAACCTTACAGGCCAGGAGAGAGTGGNATGACATATTCAAAGTGCTGAA
GGAAAAAAA
>rnd-1_family-87#DNA/TcMar-Tigger ( RepeatScout Family Size = 89, Final Multiple Alignment Size = 87, Localized to 2976 out of 4939 contigs )
ATACAGTCATGCGCCGCATAACGACGTTTCGGTCAACGACGGACCGCATA
TACGACGGTGGTCCCATAAGATTATAAT
>rnd-1_family-90#LTR/ERVL-MaLR ( RepeatScout Family Size = 85, Final Multiple Alignment Size = 85, Localized to 2976 out of 4939 contigs )
TATGGTTTGAATGTGTCCCCCAAAATTCATGTGTTGGAAACTTAATCCCC
AATGCGACAGTGTTGAGAGGTGGGGCCTTTAAGAGGTGATTAGGTCATGA
GGGCTCTGCCCTCATGAATGGATTAATGCCATTAT
>rnd-1_family-91#DNA/TcMar-Tigger ( RepeatScout Family Size = 83, Final Multiple Alignment Size = 83, Localized to 2976 out of 4939 contigs )
CATTAAGAACATTCGTGATTCATGGGAGGAGGTCAAAATATCAACATTAA
CAGGAGTTTGGAAGAAGTTGATTCCAACCCTCATGGATGACTTTGAGGGG
TTCAAGACTTCAGTGGAGGAAGTAACTGCAGATGTGGTGGAAATAGCAAG
AGAACTAGAATTAGAAGTGGAGCCTGAAGATGTGACTGAATTGCTGCAAT
CTCATGATAAAACTTGAACGGATGAGGAGTTGCTTCTTATGGATGAGCAA
AGAAAGTGGTTTCTTGAGATGGAATCTACTCCTGGTGAAGATGCTGTGAA
CATTGTTGAAATGACAACAAAGGATTTAGAATATTACATAAACTTAGTTG
ATAAAGCAGCGGCAGGGTTTGAGAGGATTGACTCCAATTTTGAAAGAAGT
TCTACTGTGGGTAAAATGCTATCAAACAGCATCGCATGCTACAGAGAAAT
CTTTCGTGAAAGGAAGAGTCAATCGATGCGGCAAACTTCATTGTTGTCTT
ATTTTAAGAAATTGCCACAGCCACCCCAACCTTCAGCAACCACCACCCTG
ATCAGTCAGCAGCCATCAACATCGAGGCAAGACCCTCCACCAGCAAAAAG
ATTACGACTCGCTGAAGGCTCAGATGATCGTTAGCATTTTTTAGCAATAA
AGTATTTTAAAT
>rnd-1_family-92#LINE/L1 ( RepeatScout Family Size = 80, Final Multiple Alignment Size = 80, Localized to 2976 out of 4939 contigs )
GAACAAGCAAGTACTCAGAGATTTTATTACCACCAGGCCNGCTTTACAAG
AGCTTCTGAAAGAAGCATTACACATAGAAAGGAACAACCAGTATTAGCCT
TTCTAAAAATATACCAAAAAGTAAAGAGCATCAACATAAAGAAGAATTTA
CATCAACGAATGGATAAAACAGCCAGTTAACATCAAATGGCAGTAACCCT
AAATTTAAATCGACTAAATCCCCCAATCAAAAGATACAGCCAAAACCTAA
CGGTATGCTACATCCAGACCCATTTCACATCCAAAGATACACAAAGACTC
AAAACAAAGGGATGGAGAAAGATTTACCAACCAAATGGAGAGCAAAAATA
AATAAATAAAAAGCAGGAGTTGCAATTCTCGCATCTGATAAAATAGATTT
CAAAGCAACAAAGATATAGTGGTAAAAGGATCAATGCAACAATAAGAGCT
AACGATCCTAACACCCAGATACATAAGACCCATAAAGAGATTTAGACTCA
ACGAGACAGAAAATTAATAAGGATATCCAGGACTTGAACTCAGATCCGGA
ACAAGTAAACTTAATAAATATTTATAGAGCTCTCCACTTTAAATACACAA
AATATACATTCTCCACCTTAAATACACAAAATATTGATCGGCCATTATTA
ATACCCATTTTTAGAATAAAGCAACATTCCCGTTCTCTCTCCCTCTTTTT
CTTCCTCTTTCTTCCTCTCCTTCACTCCTTTTTT
>rnd-1_family-93#DNA/TcMar-Tigger ( RepeatScout Family Size = 79, Final Multiple Alignment Size = 79, Localized to 2976 out of 4939 contigs )
AAAAAACAGTATATATAGGGTTCGGTACTATCCGCGGTTTCAGGCATCCA
CTGGGGGTCTTGGAACGTATCCCCCGCGGATAAGGGGGGACTACTGTA
>rnd-1_family-94#LINE/L1 ( RepeatScout Family Size = 79, Final Multiple Alignment Size = 79, Localized to 2976 out of 4939 contigs )
AAATGGATCANAGACCTAAATGTAAAANCTAAAACTATAAAACTCCTAGA
AGAAAACATAGGAGAAAATCTTCGTGACCTTGGATTNGGCAATGATTTCT
TAGATATGACACCAAAAGCACAAGCAACAAAAGAAAAAA
>rnd-1_family-95#LTR/ERV1 ( RepeatScout Family Size = 78, Final Multiple Alignment Size = 78, Localized to 2976 out of 4939 contigs )
CCCCACCCAAAATCACTAAGCCAAAGGGAAAAGTCAAGCTGGGAACTGCT
TAGGGCAAACCTGCCTCCCATTCTATTCAAAGTCATCCCTCTGCTCACTG
AGATAAATGCATATCTGATTGCCTCCTTTGGAAAGGCTAATCAGAAACTC
AAAAGAATGCAACCGTTTGTCTCTTATCTACCTATGACCTGGAAGCCCCC
TCCCCGCTTCGAGTTGTCCCGCCTTTCCGGACCGAACCAATGTACATCTT
ACATGTATTGATTGATGTCTCATGTCTCCTAAAATGTATAAAACCAAGCT
GTGCCCCGACCACCTTGGGCACATGTTCTCAGGACCTCCTGAGGCTGTGT
CA
>rnd-1_family-97#SINE/Alu ( RepeatScout Family Size = 75, Final Multiple Alignment Size = 75, Localized to 2976 out of 4939 contigs )
TGGGAGGCTGAGGCAGGAGGATCGCTTGAGCCCGGGAGGCGGAGGCTGCA
GTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGAC
CCTGTCTCAAAAAAAAAAAANAAAGAAA
>rnd-1_family-99#LTR/ERV1 ( RepeatScout Family Size = 75, Final Multiple Alignment Size = 75, Localized to 2976 out of 4939 contigs )
GTTTACAAATGCCATGGCAACGTCAGGAAGTTACCCTATATGGTCTAAAA
AGGGGAGGCATGAATAATCCACCCCTTGTTTAGCATATAATCAAGAAATA
ACCATAAAAATGGGCAACCAGCAGCCCTCGGGGCTGCTCTGCCTATGGAG
TAGCCATTCTTTTATTCCTTTACTTTCTTAATAAACTTGCTTTCACTTTA
CTCTGTGGACTCGCCCTGAATTCTTTCTTGCGCGAGATCCAAGAACCCTC
TCTTGGGGTCTGGATCGGGACCCCTTTCCGGTAACA
>rnd-1_family-96#LTR/ERVL-MaLR ( RepeatScout Family Size = 76, Final Multiple Alignment Size = 75, Localized to 2976 out of 4939 contigs )
TTCTCCCCTAGAGCCTCCAGAAGGAACGCAGCCCTGCCGACACCTTGATT
TTAGCCCAGTGAGAC
>rnd-1_family-98#snRNA ( RepeatScout Family Size = 75, Final Multiple Alignment Size = 73, Localized to 2976 out of 4939 contigs )
GTGCTCGCTTCGGCAGCACNTACACTAAAATCGGGACGATACAGAGAAGG
CCGGCGTGGCCGCNGCGCAAGGATGACACGCAAATNNGTGCAGCGTTCCG
TATTT
>rnd-1_family-102#LTR/ERVL ( RepeatScout Family Size = 73, Final Multiple Alignment Size = 73, Localized to 2976 out of 4939 contigs )
ATATATACATATATCCTATTGGTTCTGTCCCTCTGGAGAACCCTGACTAA
TACA
>rnd-1_family-101#LINE/L1 ( RepeatScout Family Size = 74, Final Multiple Alignment Size = 71, Localized to 2976 out of 4939 contigs )
TCCTGCCAAAAACGCATAACCTGAATCTAATCATGAGGAAACATCAGACA
AACCAAATTGAGGGACATTCTACAAAATAA
>rnd-1_family-103#LTR/ERV1 ( RepeatScout Family Size = 71, Final Multiple Alignment Size = 71, Localized to 2976 out of 4939 contigs )
TGTCAGAGGCGTTTGAACCAGAGCGACTCCATCTTGAATAGGGGCTGGGT
AAAATGAGGCTGAGACCTACTGGGCTGCATTCCCAGGAGGTTAAGGCATT
CTAAGTCACAGGATGAGATAGGAGGTCGGCACAAGATACAGGTCATAAAG
ACCTTGCTGATAAAACAGGNTGCGGTAAAGAAGCCGGCCAAAACCCACCA
AAACCAAGATGGCGACGAGAGTGACCTCTGGTCGTCCTCACTGCTACACT
CCCACCAGCGCCATGACAGTTTACAAATGCCATGGCAACGTCAGGAAGTT
ACCCTATATGGTCTAAAAAGGGGAGGCATGAATAATCCACCCCTTGTTTA
GCATATAATCAAGAAATAACCATAAAAATGGGCAACCAGCAGC
>rnd-1_family-105#LINE/L1 ( RepeatScout Family Size = 69, Final Multiple Alignment Size = 69, Localized to 2976 out of 4939 contigs )
AATTAAACAACATACTTCTAAATAACCNATGGGTCAAAGAAGAAATCANA
AGGGAAATTAAAAATATTTTGAGACGAATGAAAATGAAAACACAACATAC
CAAAACTTGTGGGATGCAGCAAAAGCAGTGCTNAGAGGGAAATTTATAGC
NNTAAATGCCTACATTAAAGAAGAAAAATCTCAAATNAACAACCTAACTT
TNTACCTTAAGAAACTAGAAAA
>rnd-1_family-106#Satellite ( RepeatScout Family Size = 69, Final Multiple Alignment Size = 69, Localized to 2976 out of 4939 contigs )
GATGATACAGTTGTGATTATGACATCATTGTGATATCACAATAAATGTAC
ATGTTGTACACATGACGTACATACCTATCGTGTACACGTTATGTACATGT
ANATGTACATATAGTACAGATTACGTACCTTTATCGTACCTCGGTTTTGT
GCACACATATGTACATCACAGTCAACGTACATATGGTACATACTCTGTGC
CTTGTAATATCCCAATAAGTGTACAGCTTATGAGTATATTCTGGGATACG
ATTTTAAGTATATTACATAAAAATTACTTCCAATGTCAAAGTGGGTACAC
ACCCACGTGTGTCCATTTTGTGATATTATCCATCATATTTTAAGTAGGTA
TTCCTCTCACTGTGAAAGCAAGTGTACACTCTGTGATTGTTCCAATATCA
CAGACGAAGTGCAACGCTTCTGTGATGNAGTTCCTAATATCCTGGGGACG
GAGGATGATTATACCCTGAATATCGCAGGAAGTGTACACCACCACCGTCG
TANTGTTTCTAATATCCAAAAACGAAGACGATATTCTTCCAAATATCTCA
GAAGGCGCACAACCCCACGTGATACTGTTCCNAATAACTAAGGGATCACA
GAGGACATTACTCACGATGTGACTGGAACTGTACGCCGGTCCTGAGATAT
TGCTTCTAATATTCAGGGAAGGAGGGGAGAATGTTGCTGCCCAGAGGGAA
ATACTCTCAATACGGCAAGAGGTGTCCACCAGGCTCTGANATGGTCACTA
GAGTANAAAACACAACGAGTAAATTGAATTAAACATTGCCAGGGGTGAAA
CCCCCCTATGCTTTCCATTCTAATGTCAATGGGGTTGAGGATGACATTTT
TGTCAATATGGCAGAGGTGTATCTGGAGCTATTGCCTAATATATAAAAAA
CCAGAATAACGTTATCATTNCGGTCTGATACGGTTGCCAGTATCATATTA
CACGTCATTTTCAAGAGAGCCGGGTCCCAGTAGCTGTGGGCACGGCGCCC
TAGCCAGAGGGTCCCTAAGCAGCCAGGGTGGGCCTGGGGGCTGCTACGGG
CCCTCTGGTGGCGGCTGCGGGAATAGCGTGCCGTGCATAGGTACTTGGTG
TGCCCCTATTTCAACATGTGCACATAGCTTACATAGTGGGCAAATATCTG
TACACGTGTACNTATGGTAT
>rnd-1_family-104#LINE/L1 ( RepeatScout Family Size = 70, Final Multiple Alignment Size = 69, Localized to 2976 out of 4939 contigs )
CCTGAAGGGAAGGACNCAGGCCTGGCNGGNTTCGCCACCTGCTGACTGAA
GAGCCCTNGGGCCTTGAGTAAACATCGGCGGTAGCCAGGTAGTGGTTACA
GCGGGCCTTGGGCGAGACCCAGNGCTGTGCTGGCTTCAGGTCTGACCCAG
CACAGTCCCAGCGGTGGTGGCCACAGGGGT
>rnd-1_family-85#SINE/Alu ( RepeatScout Family Size = 92, Final Multiple Alignment Size = 69, Localized to 2976 out of 4939 contigs )
CTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCAT
CCTGGTCAACATGGTGAAACC
>rnd-1_family-107#LINE/L1 ( RepeatScout Family Size = 68, Final Multiple Alignment Size = 68, Localized to 2976 out of 4939 contigs )
GGCAAGATGGCCGAATAGGAACAGCTCCGGTNTGCAGCTCCCAGCGAGAN
CGACGCAGAAGGCGGGTGATTTCCGCATTTCCAACTGAGGTACCAGGTTC
ATCTCATTGGGACTGGTTGGACAGTGGGTGCAGCCCACGGAGGGCGAGCC
GAAGCAGGGTGGGGCGTCGCCTCACCCGGGAAGCGCAAGGGGCCAGGGGA
ACTCCCTCCCCTAGCCAAGGGAAGCCGTGAGGGACTGTNCCGGAGACGGT
GCACTCCGGCCCAGATACTGCGCTTTTCCCACGGTCTTCGCAACCCGCAG
ACCAGGAGATTCCCTCNGGTGCCTACGCCACCAGGGCCCTGGGTTTCAAG
CACAAAACTGGGCGGCCGTTTGGGCAGACACCGAGCTAGCTGCAGGAGTT
TTTTTTTCATACCCCAGTGGCGCCTGGAACGCCAGCGAGACAGAACCGTT
CACTCCCCTGGAAAGGGGGCTGAAGCCAGGGAGCCAAGTGGTCTGGCTCG
GCGGGTCCCACCCCCACGGAGCCCAGCAAGCTAAGATCCACTGGCTTGAA
ATTCTCGCNGCCAGCACAGCAGTCTGAGGTCGACCTGGGACGNTCGAGCT
TGGTGGGGGGAGGGGCGTCCGCCATTGCTGAGGCTCGAGTAGGCGGTTTT

>rnd-1_family-108#DNA/TcMar-Tigger ( RepeatScout Family Size = 68, Final Multiple Alignment Size = 68, Localized to 2976 out of 4939 contigs )
TAACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGTAGAAGCTGCAG
CAAGTTATCCAGAAGATCTAGCTAAGATCATTGATGAAGGTGGCTACACT
AAACAACAGATTTTCAATGTAGACGAAACAGCCTTCTATTGGAAGAAGAT
GCCATCTAGGACTTTCATAGCTAGAGAGGAGAAGTCAATGCCTGGCTTCA
AAGCTTCAAAGGACAGGCTGACTCTTGTTAGGGCTAATGCAGCTGGTGAC
TTTAAGTTGAAGCCAATGCTCATTTACCATTCCGAAAATCCTAGGGCCCT
TAAGAATTATGCTAAATCTACTCTGCCTGTGCTCTATAAATGGAACAAAG
CCTGGATGACAGCACATCTGTTTACAGCATGGTTTACTGAATATTTTAAG
CCCACTGTTGAGAACCTACTGCTCAGAAAAAAAGATTCCTTTCAAAATAT
TACTGCTCATTGACAATGCACCTGGTCACCCAAGAGCTCTGATGGAGATG
TACAAGGAGATTAATGTTGTTTTCATGCCTGCTAACA
>rnd-1_family-110#LINE/L1 ( RepeatScout Family Size = 66, Final Multiple Alignment Size = 66, Localized to 2976 out of 4939 contigs )
TGCTAAGTGAAAGAAGCCAGACACAAAAGACCACATATTGTATGATTCCA
TTTATATGAAATGTCCAGAATAGGCAAATCTATAGAGACAGAAA
>rnd-1_family-109#LINE/L1 ( RepeatScout Family Size = 67, Final Multiple Alignment Size = 66, Localized to 2976 out of 4939 contigs )
CCTGGGCCAGAAGGGAACCCGCTGCCCTGAAGGGAAGGACCCAGNCCTGG
CAGCATTCACCACCTGCTGACTGAAGAGCCCTTGGGCCTTGAATGANCAG
CAGCGGTANCCAGGTA
>rnd-1_family-111#DNA/TcMar-Tigger ( RepeatScout Family Size = 65, Final Multiple Alignment Size = 65, Localized to 2976 out of 4939 contigs )
CCATCTCTCTCCCTCTCCTCGGGCCTCCCTATTCCCTGAGACACAACAAT
ATTGAAATTAGGCCAATTAATAACCCTACAATGGCCTCTAAGTGTTCAAG
TGAAAGGAAGAGTCGCACGTCTCTCACTTTAAATCAAAAGCTAGAAATGA
TTAAGCTTAGTGAGGAAGGCATGTCGAAAGCCGAGATAGGCCGAAAGCTA
GGCCTCTTGCGCCAAACAGCTAGCCAAGTTGTGAATGCAAAGGAAAAGTT
CTTGAAGGAAATTAAAAGTGCTACTCCAGTGAACACACGAATGATAAGAA
AGCGAAACAGCCTTATTGCTGATATGGAGAAAGTTTGAGTGGTCTGGATA
GAAGATCAAACCAGCCACAACATTCCCTTAAGCCAAAGCCTAATCCAGAG
CAAGGCCCTAACTCTCTTCAATTCTGTGAAGGCTGAGAGAGGTGAGGAAG
CTGCAGAAGAAAAGTTTGAAGCTAGCAGAGGTTGGTTCATGAGGTTTAAG
GAAAGAAGCCATCTCCATAACATAAAAGTGCAAGGTGAAGCAGCAAGTGC
TGATGTAGAAGCTGCAGCAAGTTATCCAGAAGAT
>rnd-1_family-100#Unknown ( RepeatScout Family Size = 74, Final Multiple Alignment Size = 64, Localized to 2976 out of 4939 contigs )
TGTGGCCCCAGTCATCATGAGCNATGTCCGAAAGAATTAATCACATTTCA
TATGCNAGCATGCTCTCTGTTTGACTGTGCTGTTGTTTTTAANGAGAGCA
TCATTGACAATGCTTTAACCTGATAGCCCTGCCTAATTGTGTTCTATGTA
ATAATGCGTGGGCTTGAGGAGGAGGCAGGGTTGGGGGAGAAGGAGGGAGA
ATGGACATGTGAATTAGGGAAAGGTGTNTCTTCCTTTGGAGCATGGATGG
GTTCAAATCCCTCCTCATACTACTAAGTATTCAGCTGGACACTACCAGTT
CGTGTGTCCAGACCCACTAATNTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGT
>rnd-1_family-112#SINE/Alu ( RepeatScout Family Size = 65, Final Multiple Alignment Size = 64, Localized to 2976 out of 4939 contigs )
TTTAGGCCGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGG
CCGAGGCGGGCGGATC
>rnd-1_family-113#DNA/TcMar-Tigger ( RepeatScout Family Size = 63, Final Multiple Alignment Size = 63, Localized to 2976 out of 4939 contigs )
TCCTTTCAAAATATTACTGCTCATTGACAATGCACCTGGTCACCCAAGAG
CTCTGATGGAGATGTACAAGGAGATTAATGTTGTTTTCATGCCTGCTAAC
ACAACATCCATTCTGCAGCCCATGGATCAAGGAGTAATTTTGACTTTCAA
GTCTTATTATTTAAGAAATACATTTCGTAAGGCTATAGCTGCCATAGATA
GTGATTCCTCTGATGGATCTGGGCAAAGTAAATTGAAAACCTTCTGGAAA
GGATTCACCATTCTAGATGCCATTAAGAACATTCGTGATTCATGGGAGGA
GGTCAAAATATCAACATTAACAGGAGTTTGGAAGAAGTTGATTCCAACCC
TCATGGATGACTTTGAGGGGTTCAAGACTTCAGTGGA
>rnd-1_family-114#LINE/L1 ( RepeatScout Family Size = 62, Final Multiple Alignment Size = 62, Localized to 2976 out of 4939 contigs )
GAGGATCCAAGATGGCCGAATAGGAACAGCTCCGGAGTGCAGTTCCCAGC
GAGAACGCAGAGGGTGAGTGNTCACCGCATTTCCAAACGAATTTTTACTG
CCCACAGACCAGGAGATTCCCGGGCGGAAAAGCGCCATGAGTCTCCAGCA
CGGCTGTTTCAGCCGGCGCAGCGGGTCGCCGCACAGAAACTCACACAAAT
CTGGGCGCCGTTTCAACTGGCGCCTGGAACGCCTGGGAGACAGAGCCGCC
CATTCAACTGAAAGAGAGGGGCTGAGACAGGGAGCCAGGTGATCTGGCTC
GGCGGGTCCCACCCCCACAAAGACNAGCAATCTGAAACGCTCTGGATTGA
GAGTTTCGCAGCAAGCGCAGCTGGACCCAGGACGGTCCAGCTCGGTGGGG
GGAAGGGCGTCCGCCATTACCGAGGCAGTCCGCCACTACCGAGGCAGTCC
GCCATTACCGAGGCAGTCCGCCATTACCGAGGCAGTCCGCCATNACAGAG
ANAGTCCGCCATTACNGAGGCAGTCCGCCATTACCGAGGCAGTCCGCCAT
TACTGAGGCAGTCCACCATTACTGAAGCAG
>rnd-1_family-116#DNA/TcMar-Tigger ( RepeatScout Family Size = 60, Final Multiple Alignment Size = 60, Localized to 2976 out of 4939 contigs )
ATACAGTTGACCCTTGAACAACACGGGTTTGAACTGCGCGGGTCCACTTA
TACGCGGATTTTCTTC
>rnd-1_family-118#LINE/L1 ( RepeatScout Family Size = 60, Final Multiple Alignment Size = 60, Localized to 2976 out of 4939 contigs )
AAAAGAAAACTACAGACCAATATCCCTCATGAACATAGATGCAAAAATCC
TCAACAAAATATTAGCAAACCGAATCCAGCAACATATNAAAAGGATNATA
CATCATGACCAAGTGGGATTTATCCCAGGAATGCAAGGNTGGTTCAACAT
NCGAAAATCAATCAATGTAATNCACCATATTAACAGAATAAAGGANAAAA
ACCACATGATCATCTCAATAGATGCAGAAAAAGCATTTGACAAAATT
>rnd-1_family-115#DNA/TcMar-Tigger ( RepeatScout Family Size = 61, Final Multiple Alignment Size = 59, Localized to 2976 out of 4939 contigs )
TACAGTCGGCCCTCCGTATCCGTGGGTTCCGCATCCGTGGATTCAACCAA
CCGCGGATCGAAAATA
>rnd-1_family-117#LTR/ERVL-MaLR ( RepeatScout Family Size = 60, Final Multiple Alignment Size = 59, Localized to 2976 out of 4939 contigs )
TTGTTGTTTTAAGCCACTAAGTTTTGGGGTAGTTTGTTACGCAGCAATAG
ATAACTAATACA
>rnd-1_family-119#SINE/Alu ( RepeatScout Family Size = 58, Final Multiple Alignment Size = 58, Localized to 2976 out of 4939 contigs )
TTGGGAGGCTGAGGCAGGAGGATCGCTTGAGCCCAGGAGTTCGAGACCAG
CCTGGGCAACATAGCGAGACCCCGTCTCTAAAAAAAAAAAAA
>rnd-1_family-120#LINE/L1 ( RepeatScout Family Size = 57, Final Multiple Alignment Size = 57, Localized to 2976 out of 4939 contigs )
CAAAACAAAGGGTTGGAGAAAGATTTACCAACCAAATGGAGAGCAAAAAT
AAAGAAATAAACAAAAAGCAGGAGTTGCAATTCTCGCATTTTATAAAATA
GATTTCAAAGCAACAAAGATACAGTGGTAAAAGGATCAATGCAACAATAA
GAGCTAACGATCCTAACACCCAGATACATAAGACCCATAAAGAGATTTAG
ACTCAACGAGACAGAAAATTAATAAGGATATCCAGGACTTGAATTCAGAT
CCGGAACAAGTAAACTTAATAAATATGTATAGCGCTCTCCACTTTAAATA
CACAAAATATACATTCTCCACTTTCAATACACAAAATATTGATCAGCCAT
TATTAATAACCATTCTTAGAATTAAGCAATATTCCTGTTCTCTCTCCCTC
TTTTTCTTCCTCTTTCTTCCTCTCCTTCTCTCCTTTTNTTTTTTTAAAAA
AA
>rnd-1_family-121#DNA/hAT-Charlie ( RepeatScout Family Size = 57, Final Multiple Alignment Size = 57, Localized to 2976 out of 4939 contigs )
TTTTTTTTAAGCTCATCAGCTATCGTTAGTGTTAGTGTATTTTATGTGTG
GCCCAAGACAATTCTTCTTCCAATGTGGCCCAGGGAAGCCAAAAGATTGG
ACACCCCTGCTCTA
>rnd-1_family-122#LINE/L1 ( RepeatScout Family Size = 56, Final Multiple Alignment Size = 56, Localized to 2976 out of 4939 contigs )
AAGACTACAATAAATACCTAACTCTTCAATGCCCAGACACCGACGAACAT
CCACAAGCATCAAGACCATCCAGGAAAACATGACCTCACCAAACGAACTA
AATAAGGCACCAGNGACCAATCCTGGAGAAACGGAGATATGTGACCTTTC
AGACAGAGAATTCAAAATAGCTGTTTTGAGGAAACTCAANGAAATTCAAG
ATAACACAGAGAAGGAATTCAGAATTCTATCAGATAAATTTAACAAAGAG
ATTGAAATAATTTAAAAAGAATCAAGCAGAAATTCTGGAGCTGAAAAATG
CAATTGACATACTGAAGAATGCATCAGAGTCTCTCAACAGCAGAATTGAT
CAAGCAGAAGAAAGAATTAGTGAGCTCGAAGACAGGCTATTTGAAAATAC
A
>rnd-1_family-123#LTR/ERV1 ( RepeatScout Family Size = 56, Final Multiple Alignment Size = 56, Localized to 2976 out of 4939 contigs )
CCTTTGTAGGACTAACAAATTAGCCACAAGATTAGAAATTACGGTTTAGG
AGTCATGCAGCTGGAGGCTACAAGATTCTGACCCTCCCTAAACTGCTCCT
AAGATCAGTGCTTGAGATATTTTGCAGACCCTGCACTTGATGGATCAGCT
GGCACCACCCAGATCGATAAACTGGCTCANCTGGTCCTGTGGCCCCCACC
CAGGAACTGACTCAGCGCAAGAAGACAGCTTCGACTCCCTATGATTTCAT
CCCCGACCAATCAGCACTCCCGACTCNCTGGCTTCCCCCGCCCACCAAAT
TATCCTTAAAAACCCTGNTCCCCGAATNCTCGGGGAGACTGATTTGAGTA
ATAATAAAACTCCGGTCTCC
>rnd-1_family-124#DNA/TcMar-Tigger ( RepeatScout Family Size = 55, Final Multiple Alignment Size = 55, Localized to 2976 out of 4939 contigs )
TATTAAATGCATTTTCGACTTACGATATTTTCAACTTACGATGGGTTTAT
CGGGACGTAACCCCATCGTAAGTCGAGGAGCATCTGTAT
>rnd-1_family-126#DNA/TcMar-Tigger ( RepeatScout Family Size = 53, Final Multiple Alignment Size = 53, Localized to 2976 out of 4939 contigs )
TTTGTATGTTATATGTATTATATACTGTATTCTTACAATAAAGTAAGCTA
GAGAAAAGAAAATGTTATTAAGAAAATCATAAGGAAGAGAAAATATATTT
ACTATTCATTAAGTGGAAGTGGATCATCATAAAGGTCTTCATCCTCGTCG
TCTTCACGTTGAGTAGGCTGAGGAGGAGGA
>rnd-1_family-127#DNA/TcMar-Tigger ( RepeatScout Family Size = 53, Final Multiple Alignment Size = 53, Localized to 2976 out of 4939 contigs )
TGTGATCAGTGATCTTTGATGTTACTATTGTAATTGTTTTGGGGCGCCAC
GAACCGCGCCCATATAAGACGGCGAACTTAATCGATAAATGTGTGTGTTC
TGACTGCTCCACCGACCGGCCGTTCCCCATCTCTCTCCCTCTCCTCGGGC
CTCCCTATTCCCTGAGACACAACAATATTGAAATTAGGCCAATTAATAAC
CCTACAATGGCCTCTAAGTGTTCAAGTGAAAGGAAGAGTCGCACGTCTCT
CACTTTAAATCAAAAGCTAGAAATGATTAAGCTTAGTGAGGAAGGC
>rnd-1_family-125#LTR/ERVL ( RepeatScout Family Size = 54, Final Multiple Alignment Size = 53, Localized to 2976 out of 4939 contigs )
TAGGATGACCCGTTCTGTGGACACCACTCAGCCTCTTTCCCCAGCCACCC
CTGTCATCGCCCAATGGGCCCATGAACAAAGTGGCCATGGTGGCAGGGAT
GGAGGCTACGCATGGGCTCAGCAACATGGACTTCCACTCACCAAGGCTGA
CCTGGCTACGGCCGCTGCTGAGTGCCCAACCTGCCAGCAGCAGAGACCAA
CGCTGAGCCCTCGATATGGCACCGTTCCTTCGGAGTGGATCAGCCAGCTA
CCTGGTGGCAGGTTGATTACATTGGACCNCTTCCATCATGGAAAGGGCAG
NGGTTTGTCCTCACTGGAATAGACACTTACTCCGGATATGGGTTTGCCTT
TCCTGCNCGCAGTGCTTCTGCCAANACTACCATCCGTGGACTCACAGAAT
GCCTTATCCACCGTCATGGTATTCCACACAGCATTGCCTCTGA
>rnd-1_family-128#DNA/TcMar-Tigger ( RepeatScout Family Size = 51, Final Multiple Alignment Size = 51, Localized to 2976 out of 4939 contigs )
ATGCTATTGCACACTTAATAGACTACAGTATAGTGTAAACATAACTTTTA
TATGCACTGGGAAACCAAAAAATTCGTGTGACTCGCTTTATTGCGATATT
CGCTTTA
>rnd-1_family-130#DNA/hAT-Charlie ( RepeatScout Family Size = 51, Final Multiple Alignment Size = 51, Localized to 2976 out of 4939 contigs )
CAAGCTTGTCCAACCCGCGGCCCGCGGGCCGCATGCGGCCCAGGACGGCT
TTGAATGCGGCCCAACACAAATTCGTAAACTTTCTTAAAACATTATGAGA
TTTTTTTTTTTGCGATTTTTTTT
>rnd-1_family-131#DNA/TcMar-Tigger ( RepeatScout Family Size = 50, Final Multiple Alignment Size = 50, Localized to 2976 out of 4939 contigs )
TTTTTACAAATTGAAGGTTTGTGGCAACCCTGCGTCGAGCAAGTCTATCG
GCGCCATTTTTCCAACAGCATGTGCTCACTTCGTGTCTCTGTGTCACATT
TTGGTAATTCTCGCAATATTTCA
>rnd-1_family-129#LTR/ERVL-MaLR ( RepeatScout Family Size = 51, Final Multiple Alignment Size = 50, Localized to 2976 out of 4939 contigs )
ACCTGTGAATGTGACCTTATTTGGAAANAGGGTCTTTGCAGATGTAATTA
AGTTAAG
>rnd-1_family-132#LTR/ERV1 ( RepeatScout Family Size = 49, Final Multiple Alignment Size = 49, Localized to 2976 out of 4939 contigs )
CTTCGAGTTGTCCCGCCTTTCCGGACCGAACCAATGTACATCTTACATAT
ATTGATTGATGTCTCATGTCTCCCTAAAATGTATAAAACCAAGCTGTGCC
CCGACCACCTTGGGCACATGTCGTCAGGACCTCCTGAGGCTGTGTCACGG
GCGCGCGTCCTCAACCTTGGCAAAATAAACTTTCTAAATTGACTGAGACC
TGTCTCAGAT
>rnd-1_family-133#LINE/L1 ( RepeatScout Family Size = 49, Final Multiple Alignment Size = 48, Localized to 2976 out of 4939 contigs )
GGGAGGAGGGAGAGGATCAGGAAAAATAACTAATGGGTACTAGGCTTAAT
ACCTGGGTGATGAAATAATCTGTACAACAAACCCCCATGACACGAGTTTA
CCTATGTAACAAACCTGCACATGTACCCCTGAACCTAAAATAAAAGTTAA
AAAAA
>rnd-1_family-134#LTR/ERV1 ( RepeatScout Family Size = 48, Final Multiple Alignment Size = 48, Localized to 2976 out of 4939 contigs )
TTTGTTAAGCCCTATCCTATGTAGCTGTTAGACATGCCATGCTTACAGGC
ACGTAGTACATTCTATGTCCTTGTACTTTAACCAAGATATCTGTGCTGGA
CGTGCTCACAGGCATGTCCCAGCTCTCCATTGCCTTTACCTGTTTAGAAA
AGTTTTAAGTTGTTAGCCAATCGGGTTTTAGTTTAGATTGTGAGGTCCGG
CTCCAGCCAATGGAGATCAGACACAGCAGTAAGGACGACCCCAAATGCGT
AAGGGATAAATGTGCCTGTTTTCCTTTGTTCATTGTACTCTCGTGGCAAG
ATGGCTAGCGAGAGTACCCTTCCTGCAGTCGGAAGTAAAAATTGCCTTGC
TGAGAGATCCTTTGTCTCAGTGCTGATTTTTCTTTGCGGCACCGAGCATC
TATTTCCAACA
>rnd-1_family-135#DNA/TcMar-Tigger ( RepeatScout Family Size = 47, Final Multiple Alignment Size = 47, Localized to 2976 out of 4939 contigs )
TCTTCCGCCTCTGCCACCCCTGAGACAGCAAGACCAACCCCTCCTCTTCC
TCTCCTCCTCCTCCTCAGCCTACTCAACGTGAAGACGAGGATGAAGACCT
TTATGATGATCCACTTCCACTTAATGAATAGTAAATATATTTTCTCTT
>rnd-1_family-136#DNA/TcMar-Tigger ( RepeatScout Family Size = 47, Final Multiple Alignment Size = 47, Localized to 2976 out of 4939 contigs )
TTTAGTGTAGCCTAAGTGTACAGTGTTTATAAAGTCTACAGTAGTGTACA
GTAATGTCCTAGGCCTTCACATTCACTCACCACTCACTGACTCACCCAGA
GCAACTTCCAGTCCTGCAAGCTCCATTCATGGTAAGTGCCCTATACAGGT
GTACCATTTTTTATCTTTTAT
>rnd-1_family-137#DNA/TcMar-Tigger ( RepeatScout Family Size = 47, Final Multiple Alignment Size = 46, Localized to 2976 out of 4939 contigs )
AAATCCGAAACACTTCTGGTCCCAAGCATTTCGGATAAGGGATACTCAAC
CTGTA
>rnd-1_family-138#SINE/Alu ( RepeatScout Family Size = 47, Final Multiple Alignment Size = 46, Localized to 2976 out of 4939 contigs )
ATGGGCTGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGC
CAAGG
>rnd-1_family-140#LTR/ERVL ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2976 out of 4939 contigs )
GAAGCAATTTGCCTTCAGCTGGCAAGGCCAGCAATACACCTTCACTGTCC
TACCTCAGGGNTATATCAACTCTCCGGCCCTGTGTCATAATCTAGTTCGC
AGAGATCTTGATCGCCTTTCNCTTCCACAAGATATCACACTGGTCCATTA
CATTGATGACATCATGCTGATTGGATCCAGTGAGCAAGAAGTAGCAANCA
CNCTGGACTTATTGGTAAGACATTTGCATGCCAGAGGGTGGGAAATAAAT
CCNACTAAAATTCAGGGACCTTCTACCTCAGTGAAATTTCTAGGGGTCCA
GTGGTGTGGGGCATGTCGAGATATTCCTTCTAAGGTGAAGGATAAGTTGC
TGCATTTGGCCCCTCCTACAACCAAGAAAGAGGCACAATGCCTAGTGGGC
CTCTTTGGATTTTGGAGGCAACACATTCCNCACTTGGGTGTGTTACTCCG
GCCCATTTACCGAGTGACCCGAAAGGCTGCCAGTTTTGAGTGGGGCCCAG
AACAGGAGAAGGCTCTGCAGCAGGTCCAGGCTGCTGTGCAAGCTGCTCTG
CCACTT
>rnd-1_family-141#LTR/ERV1 ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2976 out of 4939 contigs )
TGAAACCGCCTTTGCAAAATTATGACTGAGAAAATGAGACAGTGAAAGAG
ATCTGACCTAACCGACTCCATCTTGCTTCTAACCTCCAAGCTGTCCTTGT
TCATTCCTGGGCGTAGGCCGAACTAACTTTGGGAGGAACTTAGTTTATAG
TTTAAAACAAAGA
>rnd-1_family-142#SINE/Alu ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2976 out of 4939 contigs )
GGGCCGGGTGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCA
AGGCAGGNGGA
>rnd-1_family-143#LTR/ERV1 ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2976 out of 4939 contigs )
CCACCCACCAAATTATCCTTAAAAACTCTGGCCCCCGAATNCTCGGGGAG
ACTGATTTGAGTAATAATAAAACTCCGGTCTCCCGCACGGCCGGCTCTGC
GTGAATTACTCTTTCTCTATTGCAATTCCCCTGTCTCGATAAATCGGCTC
TGTCTAGGCAGCGGGCAAGGTGAACCCGTTGGGCGGTTA
>rnd-1_family-145#LTR/ERV1 ( RepeatScout Family Size = 44, Final Multiple Alignment Size = 44, Localized to 2976 out of 4939 contigs )
ACTGAGGGAATGTGTTCTCTTTCCGGGTCCACGAGGGGGCGTAGTTTCAA
GGGCAAGAACTTCCCAGCGCCATGCCCCCCTCCCATCTCTCTCCATCCGG
GAGATTTAACGGTTTNTGTTTGAATTTCGCGGGCGCGGGAAGAAACTAAG
AGTCAATCACTCCAGCGGAAGTTCTAAGGAACTCCTTTCATTGGCCNGGG
GNCTTAGAGAAGGTGGGGGTTCCTCCCAGGTTAAAAGTCCCCTTCTTCCA
CACCCCTTCGGACTCCATGTTTGGATCCCCTTCCA
>rnd-1_family-139#LINE/L1 ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 44, Localized to 2976 out of 4939 contigs )
ATATTGTATGATTCCATTTATATGAAATGTCCAGAATAGGCAAATCCATA
GAGACAGAAAGTAGATTAGTGGTTGCCAGGGGCTGGGG
>rnd-1_family-144#LTR/ERV1 ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 44, Localized to 2976 out of 4939 contigs )
ACAGGAGACAGGAGGCAGGGAAATNCTGGGTAGAAGAGGGCGGTTCCCCG
GCGAAGGCCCCACCCTCAAGCCTGAGAAACCCACGGCCCTAAGTGAGAAC
AGGCATTCCTGTTTTCGCGCCCAAAA
>rnd-1_family-146#LINE/L1 ( RepeatScout Family Size = 43, Final Multiple Alignment Size = 43, Localized to 2976 out of 4939 contigs )
GTACTGGAAGTTCTAGCCAGAGCAATNAGGCAAGAAAAAGAAATAAAAGG
CATCCAAATNGGAAAGGAGGAAGTCAAATTGTCTCTATTTGCAGATGACA
TGATCNTATATNTAGAAAACCCCA
>rnd-1_family-147#DNA/TcMar-Tigger ( RepeatScout Family Size = 43, Final Multiple Alignment Size = 43, Localized to 2976 out of 4939 contigs )
AAATCCGAAATGCTCCAAAATCCGAAACTTTTTGAGCGCCGACATGACGC
TCAAAGGAAATGCTCATTGGA
>rnd-1_family-149#LTR/ERVL ( RepeatScout Family Size = 42, Final Multiple Alignment Size = 42, Localized to 2976 out of 4939 contigs )
GAATGCCTTATCCACCGTCATGGTATTCCACACAGCATTGCCTCTGACCA
AGGNACTCACTTTACGGCNAAAGAAGTGCGGCAGTGGGCTCATGCTCATG
GAATTCACTGGTCTTACCATGTTCCCCATCATCCTGAAGCAGCTGGCTTG
ATAGAACGGTGGAATGGCCTTTTGAAGNCACAATTACAGCGCCAGCTAGG
NGACAATACCTTGCAGGGCTGGGGCGANGTTCTCCAGAAGGCCGTGTATG
CTCTGAATCAGCGNCCAATATATGGTACTGTTTCTCCCATAGCCAGGATT
CACGGGTCCAGGAATCAAGGGGTGGAAGTGGAAGTGGCACCACTCACCAT
CA
>rnd-1_family-151#LINE/L1 ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 41, Localized to 2976 out of 4939 contigs )
GGTAGAGCACCAAGCGGGCTCTTGGGGTCCCCGATTCCAGGCCTTGGCTC
TTGGACGGCATTTCTGGACCTGCCCTGGGCCAGAGGGGA
>rnd-1_family-152#DNA/TcMar-Tigger ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 41, Localized to 2976 out of 4939 contigs )
TACAGGTTGAGCATCCCTAATCCGAAAATCCGAAATCCGAAATGCTCCAA
AAT
>rnd-1_family-148#DNA/TcMar-Tigger ( RepeatScout Family Size = 42, Final Multiple Alignment Size = 41, Localized to 2976 out of 4939 contigs )
TTGCGATATTCGCTTTATTGCGGTGGTCTGGAACCGAACCCGCAATATCT
CCGAGGTATGCCT
>rnd-1_family-153#LTR/ERV1 ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 41, Localized to 2976 out of 4939 contigs )
CCTGCCTGCGGAGAGGAGCTACCCACTGCGGGTCTCCTCTCTGCTGAGAG
CTGTTCTGTCGCTCAATAAAGCTCCTCTCCGCCTTGCTCACCCTCCANTT
GTCCGCGTAACCTCATTCTTCCTGGA
>rnd-1_family-150#LTR/ERVL ( RepeatScout Family Size = 42, Final Multiple Alignment Size = 41, Localized to 2976 out of 4939 contigs )
TCAATCAGTATGCCTACGTAATGAAGCCTCCATAAAAACCCAAAAGGACG
GGGTTCGGAGAGCTTCCGGATNGCTGAACACGTGGAGGT
>rnd-1_family-154#DNA/TcMar-Tigger ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 41, Localized to 2976 out of 4939 contigs )
TTGTTGTTAATCTCTTACTGTGCCTAATTTATAAATTAAACTTTATCATA
GGTATGTATGTATAGGAAAAA
>rnd-1_family-155#LTR/ERV1 ( RepeatScout Family Size = 40, Final Multiple Alignment Size = 40, Localized to 2976 out of 4939 contigs )
GTTGCGGACCAAGCAGCCAATCCGGTATCAGAGTCAAAGATCAATCACTC
CAGAGGAAGTTTGAAAGAACTCCTCTCATTGGACGAGAACATGAATGGGG
CGGGAATAACTCCAGGGTTAAAACTCCACTGCTCCNTACCTGCGCGGATT
TCCCCTCTGGANTCCCCTCCCACGGCAGCGTGGGAGCTCTGTCTCTCCTT
CTCTCTTTCTCTCTCTCTCTC
>rnd-1_family-156#LINE/L1 ( RepeatScout Family Size = 39, Final Multiple Alignment Size = 39, Localized to 2976 out of 4939 contigs )
GAAAGGGGGCTGAAGCCAGGGAGCCAAGTGGTCTGGCTCGGCGGGTCCCA
CCCCCACGGAGNCCAGCAAGCTAAGATCCACTGGCTTGAAATTCTCGCNG
CCAGCACAGCAGTCTGAGGTCGACCTGGGACGCTCGAGCTTGGTGGGGGG
AGGGGCGTCCGCCATTGCTGAGGCTCGAGTAGGCGGTTTTNCCCTCACAG
TGTAAACAAAGCCGCCGGGAAGTTCGAACTGGGCGGAGCCCACNGCAGCT
CAGCAAGGCCA
>rnd-1_family-158#DNA/TcMar-Tigger ( RepeatScout Family Size = 38, Final Multiple Alignment Size = 38, Localized to 2976 out of 4939 contigs )
TTACAGTAAGCTAAGGTTAATTTATTACTGAAGAAAGAAAAANTTTTTAA
ATAAATTTAGTGTAGCCTAAGTGTACAGTGTTTATAAAGTCTACAGTAGT
GTACAGTAATGTCCTAGGCCTTCA
>rnd-1_family-157#LTR/ERVL ( RepeatScout Family Size = 39, Final Multiple Alignment Size = 38, Localized to 2976 out of 4939 contigs )
ATGTGACCTGAACTGCCCATCATGAACTGGGTGCTTTCTGACCCACCNAG
CCATAAAGTCGGGCGTGCACAGCAGCANTCCATCGTNAAATGGAAGTGGT
ATATACGNGATCGGGCTGAGCAGGTCCTGAAGGCACAAGTAAGTTACATG
AGNAAGTGGCCCAGATNCCCATGGTCTCCACTCCTGCCGCNCTGCCTTCT
CTCCCCCAGCCTGCACCTATGGCCTCATGGGGAGTTCCCTACGATCAGTT
GACAGAGGAAGAGAAGACTNGGGCCTGGTTCACAGATGGTTCTGCATGAT
ATGCGGGCACCACCCGAAAGTGGACAGCTGCAGCACTACAGCCCCTTTCT
AGGACATCCCTGAAGGACAGCGGTGAAGG
>rnd-1_family-159#DNA/TcMar-Tigger ( RepeatScout Family Size = 38, Final Multiple Alignment Size = 38, Localized to 2976 out of 4939 contigs )
CCCATACAACCATTCTGTTTTTCACTTTCAGTACAGTATTCAATAAATTA
CATGAGATATTCAACACTTTATTATAAAATAGGCTTTGTGTTAGATGATT
TTGCCCAACTGTAGGCTAATGTAAGTGTTCTGAGCACGTTTAAGGTAG
>rnd-1_family-160#LTR/ERV1 ( RepeatScout Family Size = 38, Final Multiple Alignment Size = 38, Localized to 2976 out of 4939 contigs )
AACAAAGATGATAACAGCCCTTTCCCAAAACAAACCTCCTTCTTGCCTGG
GGACTAGACTGCCTTTGTAGGACTAACAAATTAGCCACAAGATTAGAAAT
TATGGTTTAGGAGTCATGCAGCTGGAGGCTACA
>rnd-1_family-161#LTR/ERV1 ( RepeatScout Family Size = 38, Final Multiple Alignment Size = 38, Localized to 2976 out of 4939 contigs )
GATAAGAAACATTTACAATCTATTCTCTCTGAAGCCTGCTACCTGGAGGC
TTCATCTGCATAANAGAACCTTGGTCTCCACAACCCCTTATCTTAACCCA
GACATTCCTTTCTATTGATTCCAGGTCTTTAGATAAACT
>rnd-1_family-162#LINE/L1 ( RepeatScout Family Size = 37, Final Multiple Alignment Size = 37, Localized to 2976 out of 4939 contigs )
ATTCAATAAATGGTGCTGGGAAAACTGGATAGCCACATGCAGAAGAATGA
AACTGGACCCCTATCTCTCACCGTATACAAAAATCAACTCAAGATGGATT
AAAGACTTAAATGTAAGACCCGAAAC
>rnd-1_family-163#LTR/ERVL ( RepeatScout Family Size = 37, Final Multiple Alignment Size = 37, Localized to 2976 out of 4939 contigs )
TTCAGGATGGGGGCTGGTCGCCAGAAAGACCAAGGCATGATTAGAGGGTT
GGAACTTTCAGCCCCA
>rnd-1_family-164#LTR/ERVL ( RepeatScout Family Size = 36, Final Multiple Alignment Size = 36, Localized to 2976 out of 4939 contigs )
AGGCACAACGCCTAGTGGGCCTCTTTGGATTTTGGAGGCAACACATTCCT
CACTTGGGTGTGTTACTCTAGCCCATTTACCGAGTGACCCGAAAGGCTGC
CAGTTTTGAGTGGGGCCCAGAACAGGAGAAGGCTCTGCAGCAGGTCCAGG
CTGCTGTGCAAGCTGCTCTGCCACTTGGGCCATATGACCCAGCAGATCCA
ATGGTGCTTGAGGTGTCAGTGGCAGATAGG
>rnd-1_family-165#LTR/ERVL ( RepeatScout Family Size = 35, Final Multiple Alignment Size = 35, Localized to 2976 out of 4939 contigs )
AAATCAAAAACAATACCGCATCCCTGGAGGAATTGCAGAGATTAGTGCCA
CCATCAAGGACTTGAAAGATGCAGGGGTGGTGATTCCCACCACATCCCCA
TTCAACTCGCCTATTTGGCCCGTGCAGAAGACAGATGGATCTTGGAGAAT
GACAGTGGATTATCGTAAACTTAACCAAGTGGTGACTCCAATTGCAGCTG
CTGTACCAGATGTGGTTTCATTGCTNGAGCAAATTAACACATCTCCTGGT
ACCTGGTATGCAGCCATTGATCTGGCAAATGCNTTTTTCTCCATT
>rnd-1_family-166#LTR/ERVL ( RepeatScout Family Size = 35, Final Multiple Alignment Size = 35, Localized to 2976 out of 4939 contigs )
AGTGGAAGTGGCACCACTCACCATCACCCCTAGTGACCCACTAGCAAAAT
TTTGCTTCCTGTTCCCGCGACNCTACGTTCTGCTGGCCTAGAGGTCTTAG
TTCCAGAGGGAGGAACGCTTCCACCAGGAGACACAACAACGATTCCATTG
AACTGGAAGTTAAGATTGCCACCTGGNCACTTGGGCTCCTCCTACCTTTA
AGTCAACAGGCNAAGAAGGGAGTTACAGTGTTGGCTGGGGTGATTGACCC
NGACTATCAAGATGAAATCGGTCTGCTACTCCACAACGGAGGTAAGGAAG
AGTATGCNTGGAATACAGGAGATCCNTTAGG
>rnd-1_family-167#LTR/ERVL-MaLR ( RepeatScout Family Size = 35, Final Multiple Alignment Size = 35, Localized to 2976 out of 4939 contigs )
TGTTGTTTTAAGCCACTAAGTTTGTGGTAATTTGTTACAGCAGCAATAGA
AAACTAATACA
>rnd-1_family-168#DNA/TcMar-Tigger ( RepeatScout Family Size = 34, Final Multiple Alignment Size = 34, Localized to 2976 out of 4939 contigs )
AAAAATTCCAGAAATAAACAATTCATAAGTTTTAAATTGCGCGCCGTTCT
GAGTAGCGTGATGAAATC
>rnd-1_family-169#LTR/ERVL ( RepeatScout Family Size = 34, Final Multiple Alignment Size = 34, Localized to 2976 out of 4939 contigs )
AGTATTACCATGCCCTGTGATTAAGGTCAATGGGAAACTACAACAGCCCA
ATCCAGGCAGGACTACNAATGGCCCAGACCCTTCAGGAATGAAGGTTTGG
GTCACCCCACCAGGAAAGAACCACGACCNGCTGAGGTGCTTGCTGAAGGC
AAAGGGAATACGGAATGGGTAGTAGAAGAAGGTAGTCATAAATACCAGCT
ACGACCACGTGACCAGCTGCAGAAACGAGGACTGTAATTGTCATGAGTAT
TTCCTCCTTCTTTTGTTAAAAACATGTTTGTGCATGTATACACTTG
>rnd-1_family-170#DNA/TcMar-Tigger ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2976 out of 4939 contigs )
AAAAAGTTAACTGTAAAACAGCCTCAGGCAGGTCCTTCAGGAGGTATTCC
AGAAGAAGGCATTGTTATCATAGGA
>rnd-1_family-171#LINE/L1 ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2976 out of 4939 contigs )
AAGAGTAAAGAGGACTTTGTCTTGCANCTTGGATACCAGCTCAGCCACAG
CA
>rnd-1_family-172#LINE/L1 ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2976 out of 4939 contigs )
ATTAAAAATCTTCCCACAAAGAAAACTCCAGGCCCAGATGGCTTCACTGG
TGAATTCTACCAAACATTTAAAGAAGAAATAATA
>rnd-1_family-173#LTR/ERV1 ( RepeatScout Family Size = 32, Final Multiple Alignment Size = 32, Localized to 2976 out of 4939 contigs )
TTTCTCTCTCCTGGATTTCCCCTCTGGAGTCCCCTTCCACACACTCTTCG
TGGAAGCCTGTCTTCCCCTCCTGGACTCCATCTCTCTCTATTCCCTTCCA
CTCAGTGTGGAAGCTGCTTTCCTTCTCCTGGATTCCATCTTTCTGGATTC
TCTCACTCAGTGTGAGAGTTAGCTGTTTCTTTCTCTCTCCTCCTCCTGTT
TCTCTCTCTCT
>rnd-1_family-174#LINE/L1 ( RepeatScout Family Size = 32, Final Multiple Alignment Size = 32, Localized to 2976 out of 4939 contigs )
GGTATCCACGGCTGAGAGACCCGNAGACGGNTCACATCACAGGACTCTGT
GCAGACANCCCCCAGTACCAGCCCGGAGCCTGGTAGNCCCGCTGGGTGGC
TAGACCCAGAAGAGAGACAACAATCACTGCAGTTCGGCTCTCAGGAAGCC
ACATCCNTAGGAAAAGGGGGAGAGCACCACATCAAGGGAACACCCCGTGG
GACAAAAGAATCTGAACAGCAGCCTTGAGCCCCAGACCTTCCCTCTGACA
GAGCCTACCCAAATGAGAAGGAACCAGAAAACCAACTCTGGTAATATGAC
AAAACAAGGTTCTTTAACACACCCCCAAAATCACACTAGCTCACCAGCAA
TGGATCCAAACCAAGAAGAAATCCCTGANTTACCNGAAAAAGAATTCAGG
AGGTTAATTATTAAGCTAATCAGGGAGGCACCAGAGAAAGGCGAAGCCCA
ATGCAAGGAAATCCAAAAAATGATACAAGAAGTGAAGGGAGAAATATTCA
ANGAAATAGATAGCATAAAGAAAA
>rnd-1_family-175#DNA/TcMar-Tigger ( RepeatScout Family Size = 31, Final Multiple Alignment Size = 31, Localized to 2976 out of 4939 contigs )
TGTCCCACTGGAAGGTCTTCAGGGGCAATAACACGCATGGAGCTGTCATC
TCCTATGA
>rnd-1_family-176#LTR/ERV1 ( RepeatScout Family Size = 31, Final Multiple Alignment Size = 31, Localized to 2976 out of 4939 contigs )
ATGACAGATAGCAGGCCCTGAAGGAAATCAAAATATTTTACCCCAAAATA
TATTTCTTTGACATATTTTGAAATGGCCCTGCAAAGCTGTCTCTTGTGGG
GAAAATCTACATTCTGTAGAGAATC
>rnd-1_family-178#LTR/ERV1 ( RepeatScout Family Size = 31, Final Multiple Alignment Size = 31, Localized to 2976 out of 4939 contigs )
ACCAAACCAATGTATATCTTACATGTATTGATTGATGTCTCATGCCTCCC
TAAAATGTATAAAACCAAGCTGTANCCCGACCACCTTGGGCACATGTTCT
CAGGACCTCCTGAGGGCTGTGTCACGGGCCATGGTCACTCATATTTGGCT
CAGAATAAATCTCTTCAAATATTTTACAGAGTTTGACTCTTTTCGTCGAC
A
>rnd-1_family-180#LINE/L1 ( RepeatScout Family Size = 30, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
AAATAAAATCAGAAATGAAAGAGGAGACATTACAACTGATACCACAGAAA
TANAAAGGATCATNAGAGACTACTATGAACAACTATATGCCAACAAATTN
GANAATCTAGAAGAAATGGATAAATTCCTAGANACATACAACCTACCAAG
ATTGAATCAGGAAGAAATAGAAAACCTGAACAGACCA
>rnd-1_family-181#LTR/ERV1 ( RepeatScout Family Size = 30, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
ACTTGTAATAAGTAACTAAGGTCTGTAATTTCCACCCTACCCAGACAATG
TGTAAACTAACGCTTATCTTGACTTCTGTGAACCACTTAAGTAACAATCG
GAATGTCAAAAGTCCCCTGGCCCTCGGAATGTCCGGAGCCCCTCACCCTC
ATCTCCGCCCAGGAGGTGATTTACAG
>rnd-1_family-177#LTR/ERV1 ( RepeatScout Family Size = 31, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
ACTGTAACTGATCTTACTCTGTAACTTTCCACTGCCCACCCCAAACCTAT
AAAACCAACTCCTATCCCACCGCCCTTCGCTGACGCCCTTTTCGGCCTCA
GCCCACCTGCACCCAGGTGAATAAACAGCCATGTTGCTCACACAAAGCCT
GTTTGGGGGGTCTCTTCATTCAGAGCGTGCAT
>rnd-1_family-182#LINE/L1 ( RepeatScout Family Size = 30, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
TTTGTTTGGGAGAAAGTAAGGGAAGAGAACAAGAGTCTCTGCCTGGTAAT
CCAGAGAATTCTTCCGGATCTTATCCAAGACCACCAAGGCGGTACCTCTA
CGAGTCTGCAAGAAC
>rnd-1_family-183#LTR/ERV1 ( RepeatScout Family Size = 30, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
TAAAGTATACTCCTGTGAACAAAATTTGGAGCATATTTGTTTCTCTCTGC
CTGGTTTCTCCAGAATTTGGAAACTATTTGTGAGTATTCTTAACTTATGG
CAATATAGTTATTTGCATAAGTGCAATAAGAATCCGTTTTCTTTTGCAAC
AGGACACAATTGGAGAAACTGGTTATTTTACCAAGGCTTTGACTGGAATG
GTATGCTTCCCTTTAAGGCAGATTCCATTTAAGGAATCAAGCTTGACTTG
TAGAGCCAATAAAAGCCCCTTGGGAAAACTGGCCTCGTACCTTGTCTACA
CAGTCCCTGTACAGGGTTCCTGACCTGTGGTAAGTAAAGAATGTCACTTT
CTGACAGGCCCAGGAGCCCCAAGTTATCTTGGGACCTCAAGAGGAGAGGA
ATTCACCCAACTCATAGGTATTTGAGGGTACAAATCCATGGCTGGGCTCG
GCTTTAAA
>rnd-1_family-184#LTR/ERV1 ( RepeatScout Family Size = 30, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
CTCTCTCTCTCTCTCTCTGCCTAATAAATCGCTCTCCGCAAAACTCTTTG
GGTCCACGATATTTATTCGAACGGTAAGCTCACCGTGCCTCCGGGGCCCC
TTCCCCATTCTTGGGGTNAGAGAGGCCAAGAACCT
>rnd-1_family-179#LTR/ERV1 ( RepeatScout Family Size = 31, Final Multiple Alignment Size = 30, Localized to 2976 out of 4939 contigs )
TGACAGCGGCAGGAGGCAGACAGATTCCTAGGCGGANAGGGGCGGGTCCC
CGGTGAAACCCCACCTTCAAG
>rnd-1_family-185#LINE/L1 ( RepeatScout Family Size = 29, Final Multiple Alignment Size = 29, Localized to 2976 out of 4939 contigs )
ATGGAGGGAGCATTTAGACCAGCCCTAGCCAGAGGGGAATCGCCCATCCC
AGCGGTCGGAACTTGAGTTCCCGCAAGCCTCGCCACCGCGGGCTAAAGTG
CTCTGGGTCCTAAATAAACTTGAAAGGCAGTCTAGGCCACAAGGACTGCA
ATTCCTAGGCAAGTCCTAGTGCTGAACTGGGCCCAGAGCCAGTGGA
>rnd-1_family-186#LINE/L1 ( RepeatScout Family Size = 29, Final Multiple Alignment Size = 29, Localized to 2976 out of 4939 contigs )
CTAGAGAAAATTACCATNTGACCCAGCAATCCCACTACTGGGTATNTACC
CAAAGGANTATAAANNGTCATATGTCTATCANAAAGACACCTGCACACGN
ATGTTCATNGCAGCACTGTTCACAATAGCAAAGANNTGGAANCAACCCAA
ATGCCCATCAATGATAGANTGGATAAAGAAAATGTGGCACATATACACCA
TGGAATACTATGCAGCCATAAAAAACGATGAGTTCATGTCCTTTGTAGAG
ACATGGATGAANCTGGAAACCATCATTCTCAGCAAACTGACACAGGAACA
GAAAACCAAATACCGCATGTTCTCACTCATAGGTGGGTGNTGAACAATGA
GAACACNTGGGCACAGGGAAGGGAACAACACTCACTGGGCTAAGTGGGGG
GGTGGAGGGGGGGGGAGGGGAGGGACAGCGGGGGGTAGGGAGGATGGGGA
GGGATAACACNGGGAGAAATGCCNGATGTAGGCGACGGGG
>rnd-1_family-187#LTR/ERVL ( RepeatScout Family Size = 29, Final Multiple Alignment Size = 29, Localized to 2976 out of 4939 contigs )
GAGAGGGCATGGAAGCTCCGCGCCCCTTCCCCCATACCTCGCCCTATGCA
TCTCTTC
>rnd-1_family-189#LINE/L1 ( RepeatScout Family Size = 28, Final Multiple Alignment Size = 28, Localized to 2976 out of 4939 contigs )
TCCAGATACAGGAAGCTCAAAGAGCTNCAAGCAGATANAACTCAAAAAGA
TCTACNCCAAGACACATNATAATCAAACTGCCAAAAGTCAAAGACAAAGA
GAAAATCCTGAAAGCAGCAAGAGAAAAGCAACTNATCACGTACAAGGGAA
CCCTAATAAGATTAACAGCNGATTTCTCAGCAGAAACCNTGNAGGCCAGG
AGGGAGTGGGATGACATATTCAAAGTGCTGAAAGAAAA
>rnd-1_family-190#LTR/ERV1 ( RepeatScout Family Size = 28, Final Multiple Alignment Size = 28, Localized to 2976 out of 4939 contigs )
GGAATGTCCGAAGCCCCTCACCCCCATCCCCACCCCTCACCCTCACCCCC
GAGGTGGTTTACGGGTATAAAAAGGTCTTGNCACCCTCCTTTCGGGGCCA
CGGGTTGGAGAGACGCGAGTCCTCCGTGGCCGCCGGCAATAAAGACCCTG
CAATTTGGCATACTTTTGTCTTGGTGTTGACTTTCTGTGCTCGCTCCGGT
ACAACA
>rnd-1_family-188#LTR/ERVL-MaLR ( RepeatScout Family Size = 29, Final Multiple Alignment Size = 28, Localized to 2976 out of 4939 contigs )
CTTCCCAGCCTCCAGAACTGTGAGCCAAATAAATTTCTTTTCTTTATAAA
TTACCCAGTCTCAGGTATTTCTTTATAGCAGCGTGAAAACGGACTAA
>rnd-1_family-191#LINE/L1 ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2976 out of 4939 contigs )
GGGGAGGGATAACATGGGGAGAAATGCCAGATATAGTATGCACCTAAAGT
AAAA
>rnd-1_family-192#LTR/ERVL-MaLR ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2976 out of 4939 contigs )
TGACTGTATTTGGAGATAGGGTCTTTAAGGAGGTAATTAAGGTTAAATGA
GGTCATAAGGGTGGGGCCCTAATCCAATAGGACTGGTGTCCTTATAAGAA
GAG
>rnd-1_family-193#LTR/ERV1 ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2976 out of 4939 contigs )
CACTGAGCTGGTTAACACTTAAGCCGTCTGCGGATGGCAAAGCTAAAAGA
GCACTGTAACAC
>rnd-1_family-194#LINE/L1 ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2976 out of 4939 contigs )
TAAGAGGCAGCTCCGGAACGCAGCTCCCAGCGAGAGAGACGCAGAAGNCG
AGAGGTCTCCACAGTTCCAAACGAGGTACCAGGTTCATTTCAGTGGGTCT
GGTCGGACGGTGGGNATAGCCCAAGNAGGGCGAGCCGAGGCAGGGCGGGG
CGCTGCCCCACCCGGGAAGTGCGATGCAACTCGACCGGAGGGTCGGGGGT
CTCCCCCTCTGGNACTCCGGTTCGGATACAGCGCTTCACCCAAGCCCTCN
GCAACCCACAGAACAGGAGATCTTCGCCGGGCTGAAAACGACTCAGCGAG
CTGCCTGAACAGGGCTGAACAGCAACTCCGGCCGGTGCCGGGGCTGTCAG
CACAGACCTGGGCGGAAGCACTGGCTGACGCCAGAAAGCCAGAAAGCCGG
CGGGACGGAGCTACCCGCCCCCCAGAAAGAGGGGGAGCTGAAAGCAGGGA
AACAGGCCATANGGCAGGATG
>rnd-1_family-195#LINE/L1 ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2976 out of 4939 contigs )
GATGAGAAATTACTTAATGGGTACAATGTACACTATTCGGGTGATGGNTA
CACTAAAAGCCCAGACTTCACCACTACGCAATATATCCATGTAACAAAAC
TGCACTTGTACCCCTTAAATTTATTTAA
>rnd-1_family-196#LINE/L1 ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2976 out of 4939 contigs )
GGGAACGATCCAAGATGGCCGATCGCTAACATCTCGGGATTGCAGCTCGC
AGTTAAAGCTCATAGAACTAGAGGACGCCACACTTTCAGACAAATTCTGG
TCGCTCAGGAGCAGAAGATTCCCAGTGGAGGAGCCACGCGGGGCAGTAGT
TTCGCCGGCACCTCCGCACGGCAGCTCTCGG
>rnd-1_family-197#LTR/ERVL-MaLR ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2976 out of 4939 contigs )
CTTCCTCTCTCGCCATGTGATCTCTGCACACGCCGGCTCCCCTTCGCCTT
CCGCCATGAGTGGAAGCAGCCTGAGGCCCTCACCAGAAGCAGATGCCGGC
GCCATGCTTCTTGTACAGCCTGCAGAACCGTGAGCCAAATAAACCTCTTT
TCTT
>rnd-1_family-199#LINE/L1 ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 25, Localized to 2976 out of 4939 contigs )
TGGGAGCTGGGTGAGGCCTGTGACTGCCGGCTTTCCCCCACTTCCCTGAC
AACCTGCATGACNCAGCAGAGGCAGCCATAATCCTCCTAGGAACATAACT
CCATTGACCTGGGAACCNCACCCCATCCCCCACAGCAGCCGCAGCAAGNC
CCGCCCAAGGAGAGTCTGAGCTCAGACACGCCTAGCCCTGCCCCCACCTG
ATGGTCCTTCCCTACCCACCCTGGTAGCCGAAGACAAAGGGCATATACTC
TTGGGAGTTCTAGGGCCCCGCCCACCACCAGTCCCTCTCCATACTACCAC
AGCTGATGCTCTCTTGAAAGCGCCACCTCCTGGCNGGAGGCCAACCAGCA
CAAAANCAGNGCATTAAACCACCAAAGCTAAGGAC
>rnd-1_family-200#LINE/L1 ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 25, Localized to 2976 out of 4939 contigs )
AAAACTTCAGGAAACANTGGACACACTTATAGAAATGCAAAATGCTCTGG
AAAGTCTCAGCAGTAGAATCGANCAAGCAGAAGAAAGAATTTCAGAGCTC
GAAGACAAGGTCTTCAAATTAATNCAATCAAACAAAGACAAAGAAAAAAG
AATNNAAAAAAATGAACAAAGCCTCCAAGAAATNTGGGATTATGTNAAAC
GACCAAACCTANGANTNATCGGCGTTCCTGAGGAAGAAGAGAAATCTAAA
AGTTTGGAAAACGTATTTGGG
>rnd-1_family-198#SINE/Alu ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 24, Localized to 2976 out of 4939 contigs )
GGCTGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGA
GGCAGGAGGATCGCTTGAGCCCAGGA
>rnd-1_family-201#LTR/ERVK ( RepeatScout Family Size = 24, Final Multiple Alignment Size = 24, Localized to 2976 out of 4939 contigs )
CCCCTTCGCTGCGCACGGCCCACCTCCNNGCCTNGGTGACCTAATGGGGG
TGGACCCCTTGTTTTACTGCTCACGACCCTATCACTANCCTTAAAGATGA
TTTCACTCACTGCCCTGCCCCCTANCCTGTACNCAATAAATACTCATGCT
TCCGGACACTCGGGGCCTCGCCTGACTCCGCTTATAGGTGGCGTGGCCCC
CTGAGCCCAGCTGCNTTTTCCTTGTACTTCTGTGTCCTGTCTCTTTATTT
CTCGGATCCTGCGCCTCAGCACAGCATAAGGNACACCCCA
>rnd-1_family-202#LTR/ERVL-MaLR ( RepeatScout Family Size = 24, Final Multiple Alignment Size = 24, Localized to 2976 out of 4939 contigs )
CCTTCCACCATGTGAGGACACAGCAAGAAGGCACCATCTGTGAACCAGGA
AGCGGGCCCTCGCCAGACACCGAATCTGCCGGCACCTTGATCTTGGACTT
CCCAGCCTCCAGAACTGTGAGAAATAAATTCCTTTTGT
>rnd-1_family-203#Unknown ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
ATGCTGGGATTGTAGTCCTGCAGCCCTGTGACCAAAGGGCTGGGAGTGTT
TATGAGACTACATCTCCCAGCAAGCC
>rnd-1_family-204#LINE/L1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
TCTCTGTATTATTTCTTACAACTGCATGTGAATCTACAATTATCTCAAAA

>rnd-1_family-205#LINE/L1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
ATCAGCTTAAAATAATGGGTTATAAGATAGTATTTGCAAGCCTCATGGTA
ACCTCAA
>rnd-1_family-206#LTR/ERV1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
TCCAGACCCTACGACCCCCTCCCAGCTTGCAAAAACCGCCCTAAACTGTA
ACTTCTGTAACTTTCCACTGCCCACCCCAAACCTATAAAACCAACTCCTA
TCCCACCGCCCTCCGCTGACTCTCTTTTCGGACTCAGCCCGCCCGCACCC
GGGTGAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGGGGG
>rnd-1_family-207#LINE/L1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
TGGCCAGACTGCTTCTTTAAGTNGGGCCCCGATCCGTCCCTCCTCACTGG
GCGGGGCCTCCCTGCAGGGACTCCAGCAACTCCAGCCAGGGGCTTACGGA
CAGAGCTCCGATCTCTCCCTGGGACGGAGCTCCCGGGGGGAGGGGCGGCC
GCCATCTCTGCGGTTCAGCAGACTTAGCCGTTCCTGCCTGCTAGCTCTGG
AGAGTCCAGGCAGCCAGGATGAGGGGTCTCCCCCAGCGCAGCGCANCCGC
TCTACCAAAAAGCGGCCAGACTGCTTCTTTAAGCGGGTCCCTGATCCCGT
TCCTCCTNACTGGGTGAGACCTCCCAACGGGGTCTCCAGCCACCTCCTAC
AGGNGCGTTCCGGCCGGCANCAGGTCNGCGCCCCCCTGGGACGGAGCTCC
CAGAGGGAGGGGCAGGCCGCCATCTTTGCTGTTTCGCAGCCTTCGCTGGT
GACACCTCCAGGCACTGGAGAATCCGAGGCGACTAGGGNCTGGAGCGGAC
CCCCAGCAAACCGCAGCAGCCCTACAGAAGA
>rnd-1_family-208#LTR/ERV1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
CCCTCCCTAATTCCTGTTTTCCCGCACGCGGTTACATTTCTTCCCTGCTA
TATAAACCCCTAATTTTAGTCGGTCGAGGGATGGATTGAGACTGATCTCC
CGTCTCCTCGGCTGCAGCACCCGATTAAAGCCTTCTTCCCTGGCAATACT
CATTGTCTCAGTGATTGGCTTTCTGTGCGGTGA
>rnd-1_family-209#LTR/ERV1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
CTTCATTTACATAGGGCGTACACCAAGTAACCAATGGGAAACCTCTAGAG
GGTATTTAAACCCCAGAAAATTCTGTAACCGGGCCCTTGAGCCGCTTGCT
CGGGCCGCTCCCACNCTGTGGAGTGTACTTTCATTTTCAATAAATCTCTG
CTTTTGTTGCCT
>rnd-1_family-210#LTR/ERV1 ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2976 out of 4939 contigs )
TTGGCCCTCTTCCAAGTGTACTTTACTTCCTTTCGTTCCTGCTCTAAAAC
TTTTTAATAAACTTTCACTCCTGCTCTAAAACTTGCCTCGGTCTCTCNCT
CTGCCTTATGCCCCTCGGTCGAATTCTTTCTTCCGAGGAGGCAAGAATTG
AGTTGCTGCAGACC
>rnd-1_family-211#LTR/ERV1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
GCTCGCTCACACACCCCTCGCCGCTCCGCGCCTGGCTCGCCCTTGGCAGG
CGTGGGATCCAGGCCGGTAGCGCGAGCCGAGCGCAGCCTGCCAGGCCGAG
TGGGCGGAACGAGCCCAGCGGGCCCGAGCAAAACTCGGGCAAAGGCGCCA
CCGGCCACAGAGGTTTCCGGCCGGAAAAGCGACACCCCAAAGATCCCGTG
AC
>rnd-1_family-212#LTR/ERV1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
TTCTTTCCTTGCTTTGTTTGTGCGTTTTGTCCAATTCTTTGTTCAAAACG
CCAAGAACCTGGACACCCTCCA
>rnd-1_family-213#LTR/ERVL ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
TCAATTTCCAGACTTGAGCCAGTTTACAGACCCAGAACCCNTTGAATGAA
GGGGAGGCCGGGTCCCCTTGAGGAAGGACCCCGCTACACTACCGACAATN
TATACNGTNAATCTTTCTCCCATCCTTCCCCAAAGGGACCTNCGGCCTTT
TACCAGGGTAACTGTGCACTGGGGAAAGGGAAATAATCAGACNTTTCGGG
GACTACTGGACACTGGCTCTGAGCTGA
>rnd-1_family-215#LTR/ERV1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
TTCTCTTCTTCTTTCCTTCTCTTTTCTCTACCTAAATAAAATCACCTTTC
TGCAACACTTCTTGGGTCCGGTATTTACTTTTACGAGCATACNGCGCACC
TGCAGTGGTCCCCTCTCTCATTCTTGAGAGGNCGGAGACCA
>rnd-1_family-216#LTR/ERV1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
CCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCGGTTGTTAAACTG
TCTCTCTAAAATAATAATTGGTCGCAGCCGGCGCCAGGGAAAGGCAGTCT
CCCAATAGA
>rnd-1_family-217#LTR/ERV1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
TATGTAAATGNCACACCTGGTCNAACCAATCTNTCGGGCCCTATGTAAAT
CAGACACCGCCTCCTCAAGCCCGTCTATAAAA
>rnd-1_family-218#LINE/L1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2976 out of 4939 contigs )
TGAACTTTTGCTCCAGAACGACTGCAGGAACANACCAGGAAAGCCGAGAG
GACCCACAGACCCTCTGAAGGAAGCGGACTGCTCCTGCAGGACCCGGGAG
ACACCCCAAATACTGTGAGTGCCCAAACTGCGGAAGTGGG
>rnd-1_family-219#LTR/ERV1 ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2976 out of 4939 contigs )
AAAAAGCCCGCNAAAAGCTCTGGGAGGAGGGGGCTCTGTTGCGGGCCNAG
CAGCCAATCCGGTATCAGAGTCAAAGATCAATCACTCCAGAGGAAGTTTG
AAAGAACTCCTCTCATTGGACGAGAACATGAATGGGGCGGGAATAACTCC
AGGGTTAAAANCCCACTGCNCCTTACCTGT
>rnd-1_family-220#LTR/ERV1 ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2976 out of 4939 contigs )
TGATCAGCAGCTTCCCGATAAGATCTCAGGAGTTGGGCGAGTGGGCTCAA
GCATGCGCACTAAGAGGCAAAATGG
>rnd-1_family-214#LINE/L1 ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 20, Localized to 2976 out of 4939 contigs )
AACAAATAACAAAATGGCAGNAGTAAGTCCTTACTTATCAGTAATAACNT
TGAATGTAAATGGACTAAACTCTCCAATCAAAAGACATAGA
>rnd-1_family-221#LTR/ERV1 ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2976 out of 4939 contigs )
GCCTGCACTCCCCATAAAACCCCACGCCCCGAGNAGTCGGGCGCGACTTC
TCTGGCCCCCTTTCCCTNGGACCACNGAACCTCGCCCGGGAGCTGAATAA
ATTGGCTTCTCATTTTCTTATACTGGCCTCAGTTTCCTCATTTTAAACTC
GGCAATAAACCTTACA
>rnd-1_family-222#LTR/ERVL ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2976 out of 4939 contigs )
AAGGATAGTTGTATTATGTTAGGCGTAATTATGACCTTGTTATTGTCTTT
ATTTGAAGATTANGTATGATCTCAGGAGATGTNTATGGGTTCAAGTTGAC
AAGGGGTGGACTTGTGATGGTTAATACTGAGTGTCAACTTGACTGGATTG
AAGGATACAAAGTATTGNTCCTGGGTGTGTCTGTGAGGGTGTTGCCAAAG
GAGATTAACATTTGAGTCAGTGGACTGGGNAAGGCAGACCCACCCTT
>rnd-1_family-223#LINE/L1 ( RepeatScout Family Size = 19, Final Multiple Alignment Size = 19, Localized to 2976 out of 4939 contigs )
TTTTCAGATTGGCTTCTTTCACTTAGTAATATGCATTTAAGNTTCCTCCA
TGTCTTTTCATGGCTTGATAGCTCATTT
>rnd-1_family-224#scRNA ( RepeatScout Family Size = 19, Final Multiple Alignment Size = 19, Localized to 2976 out of 4939 contigs )
GCTGGTCCGAGTGCAGTGGTGTTTACAACTAATTGATCACAACCAGTTAC
AGATTTCTTTGTTCCTTCTCCACTCCCACTGCTTCACTTGACTAGCCTTA
AAAAAAAAAAAAAA
>rnd-1_family-225#LTR/ERVL-MaLR ( RepeatScout Family Size = 19, Final Multiple Alignment Size = 19, Localized to 2976 out of 4939 contigs )
TGTCCCTCCTCAAAATTCATATGTTGAAGCGCTAACCCCCAATGTGACGG
TATTTGGAGGTAGGGCCTTTAGGGAGGTAAT
>rnd-1_family-226#LTR/ERV1 ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2976 out of 4939 contigs )
CCAAAATATATTTCTTTGACATATTTTGAAATGGCCCTGCAAAGCTGTCT
CTTGTGGGGGAAATCTACATTCTGTAGAGAATCCCCTTCCCTTTCCAGGT
CTTTTCC
>rnd-1_family-227#LTR/ERV1 ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2976 out of 4939 contigs )
GCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCGGAAGCTAAGC
AGGGTCGGGCCTGGTTAGTACTTGGATGGGAGA
>rnd-1_family-229#LTR/ERV1 ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2976 out of 4939 contigs )
TGTGGGAAGTAGAAAAGTTCCTTTTTAAAGTTTCCTTTCTTGTTAAAGAA
TAAGT
>rnd-1_family-230#LINE/L1 ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2976 out of 4939 contigs )
TACTGATACATGCTACAACGTGGATGAACCTTGAAAACATTATGCTAAGT
GAAAGAAGCCAGACACAAA
>rnd-1_family-231#LTR/ERVL-MaLR ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2976 out of 4939 contigs )
TGATATGGTTTGGCTCTGTGTCCCCACCCAAATCTCATGTCGAATTGTAA
TCCCCAGTGTTGAGGGAGGGGCCTGGTGGGAGGTGACTGGATCATG
>rnd-1_family-232#LTR/ERV1 ( RepeatScout Family Size = 17, Final Multiple Alignment Size = 17, Localized to 2976 out of 4939 contigs )
AATAGGGTCTGGAGGCAGGGAACCTAAGGCCGATTCACGCTGACTTCCTA
GAACTAAATCGAAAGGAAAACCCCAACTTTCCACGCCCAAGTAACAAAAG
GACCAGAGGCTACTC
>rnd-1_family-233#LTR/ERVL-MaLR ( RepeatScout Family Size = 17, Final Multiple Alignment Size = 17, Localized to 2976 out of 4939 contigs )
CTGATGGTTTTTAAAGAATGGGAGTTCCCCTGCACANGCTCTCTTTTTGC
CTGCTGCCATCCATGTAAGACGTGACTTGCTCCCCCTTTCGCCTTCCGCC
ATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTGAGTCCATTAAACCT
CTTTCTTTTATAAATTACCCAGTCTCAGGTATGTCTTTATCAGCAGCGTG
AAAA
>rnd-1_family-234#LTR/ERV1 ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2976 out of 4939 contigs )
TGTTAAATCAAGTTTAGCCTAAAGCTGCCTCCTTACATATTTTAAGTTCG
GCCTAAAGGTTTCTCCGTACATNGTGAACTGTAAC
>rnd-1_family-235#LTR/ERV1 ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2976 out of 4939 contigs )
CAACCANCTGAATGGACCCCTCCTCTCGGCCAAGGGCATTCCAAAGTTAA
CCTGA
>rnd-1_family-236#LTR/ERV1 ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2976 out of 4939 contigs )
ACAGGTGCTCTTAAATGCAGGTTTCTGATAACTTTGGAGATTGTGACATT
GGAATAGAGGAAAAACGTTCAGGACTCATGAAGAGCTGAAATGTTCATGA
ATATCAAGCAGAA
>rnd-1_family-228#SINE/Alu ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 16, Localized to 2976 out of 4939 contigs )
TGGGAAAGAGGATGAGATTTCAGTTTGATATCAGAATATGTATAGTCCTG
GGCAACATAGTGAGACCCCGTCTCTACNAAAAAAAAAAAAA
>rnd-1_family-237#LINE/L1 ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2976 out of 4939 contigs )
GAACATGGATGGAACTGGAGGCCATCATCCTNAGCAAACTGACGCAGGAA
CAGAAAGCCAAATACCGCACGTTCTCACTTATAAGTGGGAGCNGAACGAT
GAGAACACATGGACACAGGGAGGGGAACANCACACACCGAGGCCTGGTGG
TGGGGATTAGGGGAGGAGAATAGCAGGGGGTGGGAGGATTGGGGAGGGAT
AGCATTAGGAGAAATACCTAATGTAGATGATGGGGCGACGGATGCAGCAA
ACCACCACCATGGCACGTGTATACCTATGTAACAAACCTGCACGATCTGC
ACATGTACCCCAGAACTTAAAGTATAATAA
>rnd-1_family-239#LINE/L1 ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
AATCATCTGAAGGTACAAAACTCACTGGTAATAGTAAGTACACAGAAAAA
CACAGAA
>rnd-1_family-240#LINE/L1 ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
AGTTGGAGGACTCACACTACCCGATTTCAAAACTTACTATAAAGCTACAG
TAATCAAGACAGTG
>rnd-1_family-241#LTR/ERVL ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
AGGATTTTGGAGCAAGGCCCTGCCATCTTCTGCAGATAACTACTCTCCTT
TTGAGAGACAGCTCTTGGCCTGTT
>rnd-1_family-242#LTR/ERVL ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
AGACATACTTAGCAGCTGGCAGAACCCCCACATTGGCTCCCTGACCTGTA
GGGTGAGGGCTATTATGGTGGGAAAGGCCAAATGGAAGCCATTAGAGCTG
CCTCTACCTAGAAAA
>rnd-1_family-238#SINE/Alu ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
AAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCAGCTACTCGGGA
GGCCGAGGCAGGAGGATCGCTTGAGCCCGGGAGGTNGAGGCTGCAGTGAG
CCGCGACGGCGCCACTGCACTCCAGCCTGGGCGACAGAAACAAATAAATA
CAATATATTAAAAATAAATAAAA
>rnd-1_family-243#LINE/L1 ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
AAAAAAAAAGGGCTCTGAGGCAGCGAGCCAGGTGATCTCTGGGAGGCTCG
GCGGGTCCCACCCCCACAGGGACAAGCAGGGCGGCGATTCGATACGCCCG
CCCGGGGTTGAGAGTTTCACTGCGGACACAGCTGAGCCCAGGACGGTGCA
GCTCGGTGGGGGAGGGGCGTCCGCCATTGCCGAGGCATTCCACCCCTACG
GAGNTATACTCCCATTGCTGACGCAGCCTGCCATTGCCGAGGCAACCCGC
CACAGCAGGGCAGANCCCACGCAATACAGAGGCAACAGGGCGGAGCCCAC
GACAGCAGGGCGGAGCCCACGGCAACAGGGCGGAGCCCACGACAGCAGGG
CAGAGCCCACGGCAGCAGGGCAGAGCCCANGACAGCAGGGCGGAGCCCAC
GGCAGCAGGGCGGAGCCCACGGCAGGCAAATAGTGACTAGACTGCCTCCT
AGCTGGGCAGGACAGCGCAACGGATACTCATAAAGAAAGCCCTAACTCCC
CGAGACAGAGCACCTGAGGAAAAAAAAGGGGTTTTATGAGTTCTGCTGCA
GCAGACCTAAACATNCCNGCCTAACAGCCCTGAATGAACAANGGAGCTCA
CAGCTCAGCACCTGAGCTCCAATAAAGTACGGACCATCTCCTCAAGCAGC
TCCCTGACCCCCGTATATCCAAAGAGTCACCTCAAAAAGGACTGATCAGA
CTGACATTTGGTGGGCATCATTCTGGGACAAAGACAGCAGAAGAAGAAAC
TGGTAGCATCCCTCACTGTTCTGCAGCTGCTACAGGTGTACCCCAGACAA
GCAGGGCCTGGAGTGGACCTCAGCAGTCGTANAGCAGAGGGGCTAGACTG
TTAGAAGGAAAACTAAGNAACAGAAATACTTCATCATCAACAATCTGGG
>rnd-1_family-244#LTR/ERVL ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
ACCTTGCCCTGTGTATCTCTTCATCTGGCTGTTCATCTGTATCCTTTATA
ATAT
>rnd-1_family-245#LTR/ERVK ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
TGTGTCAGTGTACTTTATTCATCCATCGCTGAGTCAGGGTCTGCAGGACA
GACCC
>rnd-1_family-246#LTR/ERV1 ( RepeatScout Family Size = 15, Final Multiple Alignment Size = 15, Localized to 2976 out of 4939 contigs )
TTCCTCTGATTGATCCCCACCCTTCACCTATTTTACATATACCTACCCTT
TCCTAATTGGTTTTCTACACTGTCGTGCCCACCTTTGAGTGGTGTCTTCG
CTTTAACCTTTTTTGCATACTCACAAACCAATCAGCACACACTCCCCATT
CTGAGCCCATAAAA
>rnd-2_family-87#SINE/Alu ( Recon Family Size = 105, Final Multiple Alignment Size = 105 )
AAAGTCACAGNTTCGACANGGTCCTCCAATGGCACGACNCAACACGCTCC
CTATATAAAACATAAAAACAGAGCAAAATAAGAAATCTGAGGCAGGCATG
GAATGCGCTCGCTTCGGAATCACGTACACTATAATCAGGANGCCGTACGG
AATCCGGGGTGGCCGCAGCGTGAAAATGACACGCAAGAAGTTCAGTGTTC
CGTTTTCATTTATGTATGTATTTTTCGANATTGTGGCTGTGTTTTAGAAA
TCAAATACACATAGACTTGAGGTACGAGTTACAAAAATATAGAAAGTTAG
CTGGACGTGGTGGTGTGGACACNTGCAACCCCAGCTACATTGAAGGCATA
GGCAGGACAATCGCTTGAACCCAGAAGGCCGGTGTGGCAATAAGCCAAGA
TCGCACTGTTGCACTCCAGCCCGGGTGACAAGAGGGAAACAGTACGTCAT
AAGGAAAGGCTGGGCTAGGGGTGGAGTCCCGCAGGCACCCCGTTTCGTTT
CAGTGGTGCACACTGATCTGTCTGATTTCTTTTCTTTTCTTTTTCTTCT
>rnd-2_family-46#Simple_repeat ( Recon Family Size = 45, Final Multiple Alignment Size = 44 )
CTCTCCCCTCGCTGAGTTCTGTGTGTGTATATACCGTGTGTGCATGCGTG
TGCNCGCGTGTNTACGTATGTAATATATGTGTTGTTTCATACGCATATAT
NTGTACGCGTGTGCGTATGTACATATGTATGTGTATACATATGTGCGCGT
GTGTGTGTGTTTGCGCGTGTGTGTNTGCGTGTGCGTATATATGTATGCGT
TATACGTGCGTGAATATGTACATATATATACGTANGANNGTATATGTATG
TATGTGTGTATGTGTATATANNCACACATATGTATGCATACGTATATATG
TGTGTGTATACATGTATGTGTGTGTATATGCGTGTGCGTGTATATATGTG
TGTGTGCATGCACATATTGGGTATGTATGTATATATGCGTGTATATGTAC
ACGTGTGTATATGTGTATATACGTATATGCATGTATGTATATATGTATAT
GTGTGCATGTGTGTATGTACATATGTGTTNTGTGCATGTGTNTATGTGTG
TATACGTGCATGTTGCATGTGTGTATACGTGTGTGTGTGTGCGCGCGTGT
GTGTGCATGTGTGTATGTATGCATGTGTACAGGTGTAAGAGCCGTATGTA
TGTGTGCATAGNNTGTGTGAGCATGTACGTACGTNCGTACGTGTGTGAGC
GTGTGTGTACGCATGTGTGAATGTGTGAGNACTATGTGGTGTGCGCGTGC
ACGTGTGTGAGCTCATGTGCATGTGCGTGTGTGTGCGCATGTGTGTATGC
GTGTGGCTGTGTGTGCACGCATGTGTAGGTATGTGTGTGTGTGTGTATGT
GTGCACGTGCGCGCGCGTGTGTGTATGCGTATATGTGTGCGTGCATGTGT
GCGTGTATGCGCGTGCGNGCGTGTGTGCATGTGTGCATCTATGTGCATGC
GTGTGTGTGCATGTGTGTNCGTATGCGCGTGTGTGTACGCGTGTGTGAGN
AAGTGCGNGTGTGAGTGTGTGAGTGTGCGAGTGTGCGTGCGTGTGTGTGT
GCGTGTGNGTGTGTGTGNGTGTGGTTGAGCGTGTGNATGTGTGCACGTGT
GTGTGTGTGATGTGCGCATGCGTGNGNGGGAGGCAGTGTGTGTAGGTGGC
TGTGCATGTGTGTGTGTGCA
>rnd-2_family-52#LINE/L2 ( Recon Family Size = 54, Final Multiple Alignment Size = 41 )
AAGTCCTNNCCGTAGTCTATGANGCCCTACANAATCCGGCCCCCGGCCAC
CACCTCTCAGACCTCATTCCTACTACTCTCCTTCTTCCCATTCTNTTCCA
GCCACACTAGCCTTCTCGCTANACCTCAAGAAATACTGTGCTCCAGCTCG
GATCATTGCACTTGNTNCTCCATCCGGAGTGTTTTTTCCCCAGATATTCA
CGAGCGGCACAACACTNCCTCACCTCCTTCTAGTCTTTACTCAAGNGTCA
CCTTCTNANTGAAGCCTTCCCTGACCACCNTATCTAAAACTGCAACACCC
CACNCTTCTCCCACNATCCCTGACTCCTTTCATACCTCCTTTCCTGCTTT
ATTTTCCTTNCATAGCATTTATCAAATNCTATGTATTTCACTTACATGNA
TTGTTCTGTCTCCCTCACTAGAATGTAAGCTCCATGAGGGCAGGGATTTT
TGTCTGTTTTGTTCACTGCTGTATCCCCAGCGCCTAGAACAGTGCCTGGC
ACATAGTAGGTGCTCAATAAATATTTGTTGAATGAATG
>rnd-2_family-72#LINE/L1 ( Recon Family Size = 35, Final Multiple Alignment Size = 33 )
GGAATGTAGATAATGGGAGCCAGGTTTCTCACNGCCAGAGAATAGAAGTT
ACAAATAAGCAAAGGGAAAGGCTAGAATGAACCCTGTGGTNNTGGATTAG
AGTCGGAGATATCGGTANGAACTTATGATTTTTAAACATATATATAGATA
TTTACGTACGTATACATACGTGTANATATGTATATTCACATGAGTTAGTA
TACATACATATATTTCCTNGCTCTGTCCGCTGAGAGNGCCTAGAAGCAAC
GGCACCCCAGTAGCACAACGAGTGCACGTCTAGCACCCAGATCTTGGTTT
CTAATACTATTCTTCNATNAAAAGAACTAAGGCTCCTTGAGAAATGCCTG
ATTCTAGGACTGGGGCAGAAAATACACAAGACGANCCTGGAGCATCTTAT
NGTCCAGAAAGTAAGAAGGTAGTTAGATCACGCANAAACCGCACGTACGC
ACACACACAAACGCACACACATGATTAANGGGTTATNNAAAGGACACAGG
AGCCAACTGAAAAAGCTCCCANTGGCCAAAGCTGGAACAATTTGAGCAAC
AAAAAAAAAGTAGTATTGGATTATAACCCAAAGTATAAAGTAAATATCCA
TGAGTCCATATTGATATAAATAAACGATTGAAAATAAATAGGGGAAGAAN
AGATAAATCTCCCGTGCAGAAGAATTCCAAATAATTTGTGTAGATACTCC
AGCCTCAAGGAGGTGGAGCATAACTCTCCACTCCTTAAGTGTGGGCTGCG
CATAGTGACTTTCTTCCAAAGAGTACAGTATGAAAAGGNAGAGGGNAAAA
GAGTAACTTTACAGTGGAGAAACCTGACGAACACCTCAGCTAAGCGATAA
GTCATCTTGATAGTATATACCCTTGATATGATGTGACGAGAATGGCACTT
CTACAANCCCGTAACCCCAGTCTAATCATGAGAAAAACATCAGACAAATT
CCAATAGAGAGGCATTCTACAAAATANCTGACCAGTANTCCTCAAAACTT
TCAAGGTCATNAAAAACAAGGAAAGTCTAAGAAACTGTCATAGCCAAGAG
GAGCCTAAGGAGACATGACAACTAAACGTAATGTGGTATCCTGGATGGGA
TCCTGGAACAGAAAAAGACATTAGNNAAAACNAAGAAAATCTGAATAAAG
TACGNACTTTAGTTAATAATAACAACATTGTTCGTTAATTGTGACAAATA
TACCANACTAAGATGTTAATAATAGGGGAAACTCGGGTGTAAAGGTACAT
GGGAACGGATGGGTATGTGGGAAACTCTGTACTATCTTCGCAATTTTTCT
GTAAATCTAAAATTGTTCTAAAAATAAAGTCTATTTAAA
>rnd-2_family-213#DNA/hAT-Charlie ( Recon Family Size = 30, Final Multiple Alignment Size = 28 )
CTTGTTCTCAACCCTGGCTGCACATTAGAATCACCTGGGAGCTTTTAAAA
ATCCCGATGCCCAGGCCGCACCCCAGACCAATTAAATCAGAATCTCTGGC
GCAGGCAAGTATATGTTTTAAAGCTCCCCAGGTGATTCCAATGTGCAGCC
AAGNTTGAGAACCACTTTTT
>rnd-2_family-54#DNA/TcMar-Mariner ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
TTAGGTTGGTGCAAAAGTAATTGCGGTTTTTTTGCCATTACTTTTTTTGC
TTAATGGCAAAAACCGCAATTACTTTTGCACCAACCT
>rnd-2_family-34#SINE/MIR ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
CTCTGCCACTTACTAGCTGCGTGACCTCGGGCAAGTTNTCTAAACCTCTC
TGNGCCTCAGTTTCCTCATCTGTAAAATGGGAATAATAATAGTACCTACC
TCACAGAGTTGTTGTGAGGATTAAATAATATGTNTAAAGCACTCGGAACA
GTGCCTGGCACACAGTAAGCGCTCAATAAATGTTAGCTGTA
>rnd-2_family-358#DNA/hAT-Charlie ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GCTGTCCAATAGAACTTTCTGCGATGATGGAAATGTTCTGTATCTGCGCT
GTCCAATACGGTAGCCACTAGCCACATGTGGCTATTGAGCACTTGAAATG
TGGCTAGTGCGACTGAGGAACTGAATTTTTAATTTTATTTTAATTAATTT
AAATTAAATAGCCACATGTGGCTAGCGGCTACCGTATTGGACAGCACAGC
T
>rnd-2_family-180#DNA/hAT-Charlie ( Recon Family Size = 23, Final Multiple Alignment Size = 20 )
TTGCGCTGTCCAATATGGTAGCCACCGGCCACATGTGGCTACTGAGCACT
TGAAATGTGGCTAGTCTGAATTGAGATGCGCTGTAAGTGTAAAATACACA
CCGGATTTCGAAGACTTAGTATGAAAAAGAAATGTAAAATATCATTAATA
ATTTTTATATTGATTATATGTTGAAATGATAATATTTTGGATATATTGGG
TTAAATAAAATATATCATTAAAATTAATTTCACCTGTTTCTTTTAC
>rnd-2_family-21#DNA/TcMar-Tigger ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
GGCTGAAAAATTCCTATCGCCTAGTGACGTCATAGTGCAACGCATTACTC
ATGTTTGTGGTGATGCTGGTGTAAACAAACCTACTGCACTGCCGGTCATA
TAAAAGTATAGCACATACAATTATGTACAGTACATAATACTTGATAATGA
TAAACGACTATGTTACTGGTTTATGTATTTACTATACTTNTTATTGTTAT
TTTAGAGTGTACTCTTCTACTTACTTTTTAAAAAGGAATTAACTGTAAAA
CAGCCTCAGGCAGGTCCTTCAGGAGGTATTCCAGAAGAAGGCATTGTTAT
CATAGGAGATGACAGCTCCATGCGTGTTATTGCCCCTGAAGACCTTCCAG
TGGGACAAGATGTGGAGGTGGAAGACGGTGATATTGATGATCCTGACCCT
GTGTAGGCCTAGGCTAATGTGTGTGTTTGTGTCTTAGTTTTTAACAAAAA
AGTTTAAAAAGTAAAATAAAAANNNTTTAATATGAAAAAGCTTATAGAAT
AAGGATATAAAAAGAAAATATTTTTGTACAGCTGTACAATGTGTTTGTGT
TTTAAGCTAAATGTTATTACAAAAGAGTAAAAA
>rnd-2_family-191#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
CTGATATTGTGAAATATATATTTGGTCTTCGTCCAGTTTCCTGGCACANA
GCTCCTAAAATCCTTGGAATCTCCGGAGTGACGGGCGTCTTTTGTATGCT
AATGAGGGCGGCTGATGGNCGGGAGCTCCTGATAGCTTCAGGATGGGGGC
TGGTCGCCAGAAAGACCAAGGCAGATTAGAAGGGTTGGAACTTTCAGCCC
CACCCCCGACCTCCGGGGAGGGGAGAGGGGCTGAAGNTTGAGTTGATCAC
CANTGGCCAGTGATTTAATCAGTNATTCTCCATAAAANCCCNAAAGGACA
GNGTTCGGAGAGCTTCCGGATNGCTGAACACGTGGAGGTTTCTGGGAGGN
TGGCATGCCCGGAGAGGGCATGGAAGCTCCACGTCCCTTCCTACACCTCG
CGTACGCACCCCTTCCTCGCGTCTCTTCCGCATCCTTTGTAATATCCTTT
ATAATAAACCGGTAAATGTAAGAAGTGCTTCCCTGAGTTCTGTGAGCCAT
TCTAGCGAATTAATCGAACCCGAGGAGGGGGTCGTGGGAACCTCAATTTA
TAGCCAGCCGGTCAGAAGTACGGGCGGCTCCCGGGACTTGCGACTGGCAT
CTGAAGTGAGGAGCAGTCTTGTGGGACTGAGCCCTCAACCTGCGGGATCT
GATGCTANCTCCAGGTAGATAGTGTCAGAATTGAATTGGAGGACACCCAG
CTGGTGTCTGCCGNAGAATTGACTGTTTGCTNGTCTGTGTTGATTGTCGT
TGANTGAGTAGAANAGAAGAAACAATTTGGGTTTGCTTTTTTCCTACNCA
GCCCNTA
>rnd-2_family-263#DNA/hAT-Charlie ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GGGGTTAGCAAACTACGGCCCGTGGGCCAAATCTAGCCTACCGCCTGTTT
TTGTACGGCCCGCGAGCTAAGAATGGTTTTTACATTTTTAATGGTTTGAA
AAAAATCAAAAGAATATTTCGTGACACGTGAAAATTATATGAAATTCAAA
TTTCAGC
>rnd-2_family-98#SINE/Alu ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GTCTCAAACCCACAGCCTCGCCTGTTCCACCCTAATTGGTATTCAGATTG
CCTGGATGAAAGGCTCCCGTGAGCCACCGCGCCCGGCCGGCCGACTTTAT
TATTAAAAAACAAATCAGGGAGACTGGGCCGGGCTCTGTGACACAAACCA
GCAATCCTAGCNCTTTGGGAGGCCTAGGTGAGCGGGTCAACTGAGGTCGC
GGGTTCCAGATCAGCCTGCGCATCCCGGTGAAAACTCGCCACACTTAAAA
TAGGAG
>rnd-2_family-36#DNA/TcMar-Tigger ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ATTTTTTGAGTGCTNACATGATACCACAAGTGGAAAATTCCACACCTGAC
CTCATGTGATGAGTCGCAGTCAAAACTTTGTTTCATGCACAAAATTATTT
AAAATATTGTATAAAATTACCTTCAGGCTATGTGTATAAGGTGTATATGA
AACATAAATGAATTTCATGTTTAGACTTGGGTCCCATCCCCAAGATATCT
CATTATGTATATGCAAATATTCCAAAATCCGAA
>rnd-2_family-197#SINE/MIR ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TCAAATATTTTAAGAGTTGAATTNTNGGGGTTCAAATCCAGCTCCGACAC
TTACTGGCTGTGTGGCCTTGGGCAAGTTACTTNACCTCTCTGAGCCTCAG
TTTCTCTCTGCGAAATGTGGATAATNATAGATATCTGTCTCACAGGGTTG
TTGTGAGGATTAAATGAAATGAGTTAACACTGTAAAGTNCTTAGAACAGT
GCCTGGCACACAGTAAGTGCTCAATAAATGTTAGGTAATACTGTTGCTAT
TACTTCCAGGAAA
>rnd-2_family-199#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CAAAAGGACACAAGAAACTTTTGGAGGTGATGGNTATGTTCGTTACCTTG
ATTGTGGTGATGGTTTCACGGGTGTATGCATATGTCGAAACTCATCGAAT
TGTATACTTTAAATATGTGCAGTTTNTTGTATGTCAATTATACCTCAATA
AAGCT
>rnd-2_family-85#LTR/ERVL-MaLR ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGGGTGGGCTCTAGATCGAGTGGCGGGTGNCCTNACAAGCATAAGAAGAG
ACACAGAGGAGANNNAAGACCCAGANAGAAAGGACNATGTGAAGACGGAG
GCAGAGATTGGAGTGATGCATCTACAAGCCAAGGAACGCCAGGGATTGCC
GGCAGCCACCAGAAGCTAGGAGAG
>rnd-3_family-3#LTR/ERVL-MaLR ( Recon Family Size = 208, Final Multiple Alignment Size = 139 )
TTCCTGCATGTTAGTCTGCATCTCAGAGTTTGTTTCCCAAAGAATGGCCG
CANCAGTCCTCCATACNCTCCCCTTGTATCNCATGCCCTTTGCAATGTGA
CTTTGCNGCTCCTCCCATCAAGAGGTGGAGTCTATTTCTTTCCCTCCCCT
TGAATCTGGGCTGGGCCCTTGTGTGACTTGCTTTGGCCAATAGAATGCGG
CAGAAGTGACGNTGTGCCAGTTCTGAGCCTAGAGCTCNAGAAGCTTTGCA
TGCTGTTTCTGTTGCTCTTGGAGCCCTGCTGCCACTGTGAGAACAAGTCC
GGGCTAGCCTGCTGGAGGATGAGAGACGAGTGGCCAAGTCACTGCTGTTG
CCCCAGCTGGCAGCCAACCAGCCCCTGAAGCAGAGCCACCTGGCCAACCA
CAGTGCATGAGTGAGCCCGGCCGAGACCAGAAACAAGCCCGCTGAGCCCT
GCCCAAATTCCTGACCCACAGAATCGTGAGATAATAAATGGTATTGTTTT
AAGCCACTAAGTTTTGGGGTNGTTTGTTACGCAGCAATCTNNAACTGA
>rnd-3_family-78#LTR/ERVL ( Recon Family Size = 83, Final Multiple Alignment Size = 72 )
CTGTAAGAAGAAGGAATTCTGCCAGCAGACTGCCTTCGGACTCGAACTGC
AACTCTTCCCTGGGTCTCCAGCCTGCCGGCCCGCCCTGCAGATTTCGGAC
TTGCCAGCCTCCACAATCGCGTGAGCCAATTCCTTANAATAAATCTCTGT
GTATATACACACATACTGTTGGTTCTGCTTCTCTGGAGAACTCT
>rnd-3_family-542#LTR/ERVL-MaLR ( Recon Family Size = 72, Final Multiple Alignment Size = 67 )
TTGTGGTAGGCAGAATAATGGCCCTCCCCAAAAGATGTCCACGTCCTAAT
CCCCGGAACCTGTGAATATGTTACCTTACATGGCAAAAGGGACTTTGCAG
ATGTGATTAAGGTTAATGGAATTAAGCTG
>rnd-3_family-8#DNA/TcMar-Mariner ( Recon Family Size = 60, Final Multiple Alignment Size = 59 )
AGAGCAGGGTTTCTCAACCTCGGCACTATTGACATTTTGGGCCGGATAAT
TCTTTG
>rnd-3_family-122#LTR/ERV1 ( Recon Family Size = 72, Final Multiple Alignment Size = 57 )
TGNTGGGGTTCAGAACATGCTACCCCAAAATACGGCACTTTGGCATACTG
ANTATTTTGAGCTGAAGGACATCGGAGAAGCCNNCAGAAGCAAGCTCTCT
CTGACCTTCTCCCGCCCTCCTGTCTCCCGCCCCTCTTTCTCCCCGAGGCA
AGTCATAGAAACCAGAACTCCTCTTCCCCAAGGTGGGTCATAGAAACTAG
AATTCCTCTACCCCCCCAAAGCCGGCCACTTCTGTGTAAAACCTAGAAAG
GNTACTCTGACTTTCTCCCTTGAAGACCCTCATTCCAGAGGTGTCCTGCC
CTATACCCGGAGGAAAGGAATGCCGCACAGAGAGGCCAAGAAGAATCTGA
ACAGACAGGCCTTGCTAGTCTTGCTCCCATCCCCAGTTTATTACCATTAG
ATCATACCCTTTTGTCCAATCACATTTCTNCACGGCTGTCCATTCTTCGT
CGAACCTAAGCATAAAAATGGACAGTTTTCCCTGCGTCTTTGGGTCTTCA
TTTCTGAAGGCTCCCGTGTCACGTAAAACTAATTAAATAAATTTGTTATG
CTTTTCTCTTGTTAATCTGTCTTTTGTTATAGGAGTCTCAGCCATGAACC
TTATGATGGGTGAGGAAAGGTATCCA
>rnd-3_family-95#DNA/hAT-Charlie ( Recon Family Size = 55, Final Multiple Alignment Size = 51 )
GCAGTGGTTCTCAAAGTGTGGTCCCCGGACCAGCAATCGTTAGACGGAAC
ATACAATTCTCAGGCAGGCCCCCTGCCCAGACCTACTGAATCAGAAACTC
TGGGGGTAGGGCCCAGGAATCTGCGTTTTAACAAGNTCCCCAGGTGATTC
TGATGCACGCTNAAGTTTGAGAACCACTGGT
>rnd-3_family-219#DNA/TcMar-Tigger ( Recon Family Size = 49, Final Multiple Alignment Size = 49 )
TGTTAATCGACTGTTTATGTTATCGGTAAGGCTTCCGGTCAACAGTAGGC
TATTAGTAGTTAAGTTTTGGGGGAGTCAAAAGTTATACGCGGATTTTCGA
CTGCGCGGGGGTCGGCGCCCCTAACCCCCGCGTTGTTCAAGGGTGG
>rnd-3_family-275#LTR/ERVL ( Recon Family Size = 47, Final Multiple Alignment Size = 46 )
TGCCCCTCCAGATCCACTCTCCACCCTTCTCCGCCCTGCTCTGTGCCCAG
GAGGCTGACCTTCGTGGACTGCATCAACGGGCTCCCTTGCCCTCTGGCTT
CCGGTTGGGTTCGGCCAATGGGAGGCACCGGCAGGAGATCGGAGAGAGGA
AGGAAGAGNGAGGTCGGGGTGTTTATTCCCCCGGCTCCCCGCTTCTGGTC
GCTGCGGGCTGGCTGTGTCCCCTAAGGAGGCCACAGCTCCTNTCAGGCAG
CCCTTCCTATGCAGCTCCCTNCTGTGACTTCCTGGAACTCCTTCCTCCTG
CCCCTTCAGGCCTAGGGGTGGTAACGAGGCTTCCGCTGTTGCTAGCCCCG
GGGTGCTNCACTATCCCTCGTTGGTTTCCCTACACCCTGCCCACACCTTT
GTAAATAGTCCCTTTATTAAACTCTCCTTAAATTACCCAATTTGAGNATG
CCATCTGTTTCCTGCTGGGACCCTGACTGACACAGCCAGACAGACATTAA
ATAA
>rnd-3_family-250#LINE/L1 ( Recon Family Size = 48, Final Multiple Alignment Size = 45 )
TGTGTGGCTATAAAAGGGCAACACGAGGGATCCTTGTGGTGATGGAACNG
TTCTGTATCTTGACCTGTGGTGGCATTTACACGAAATCTACACATGTGAT
AAAATTGCATAGAACTANACACACGCATACAAATGAGTACAAACTGGTGA
AATCTGAATATCGGTGGATTGTATCAATGTCAGTTTCCTGGTTNTGATAT
TGTACTATAGTTNTGCAAGATGTTACCACTGGGAGAAAAGCTGGGTAAGG
GTACACGGGACCTCTCTGTGTATTATTTTTGCAACTTCCTGTGAATCTAT
AATTATTTCAAAATAAAAAGTTATTTTTTTTTAAAGGGGGAATTTCACTG

>rnd-3_family-24#LTR/ERVL ( Recon Family Size = 45, Final Multiple Alignment Size = 42 )
ACACACGCACCTGAGCTGGGGCAGACGCTACGGGTGCTCGCCGCAGCCCG
GTGTGCAGCACGCCTCGGCACTACCCCACTTCCAACCGCCAGCACCTGCA
NCTCTGCCTGAGGGCTTTCTCTGGCCGCCAGAGTCTGCCGTCATCGGGGC
AGGCCAGAAGTGCCGGGGAGTTAACGCCTTCGGGAGCAGCCCTCAGCCAG
ATGACGGNGNGGAGTTGGTGGATAAATACCCAGCTCCCTCGCCCTCAGTG
GGACGACTGAGGCGTGTTCTGCACCGTCTCCCAAGTCCCCAGCGGGGTTG
AGCCCCAGTTGCCCGCAGCGGTAACCGGCTCGATAACGCACCCTTTGTTG
GCTTTCTTCCTTCCCCCTNTCTCACTCCCCTNCTCCCCTACCNGTGCTTC
CTGGGATCACCTCCCAAATAAACTACTTGAAATCCTTGTCTCAGGGTCTG
CTTCTGGGGGAACCCAACCCAAGACACGAACCCTCGCACA
>rnd-3_family-89#LINE/L1 ( Recon Family Size = 46, Final Multiple Alignment Size = 41 )
TGCGAAATAACTCAATGTGGGATGNATAAGTTTTTGTGGTATATTTATAC
AATTGAATGCTACANAGTAGTATGAAAAGAGTAAAATGANCTANNACTAC
ATACAACAATATGGATGAATCTCGCAAACATAATGTTGAGCGAAAGAAGC
CAGACACAAANGAGTAACATACTGTATGATTCCATTTATATAAAGTAAAA
AACAGGCAAAACTAATCTATGTCAGAATAGTGGTTACCTTGGGGGTANTG
ACTGGAGAGGGCACGAGGGGGGCTTCTGGGGTGCTGGTAATGTTCTNTTC
TTGATCTGGGTGCTGGTTACATAGGTGTGTTCAGTTTATGAAAATTCATC
GAGCTGTACACTTATGATTTGTGCACTTTTCTGTATGTATATTATACTTC
AA
>rnd-3_family-234#LINE/L1 ( Recon Family Size = 44, Final Multiple Alignment Size = 38 )
AAACACTGTAATTGTGGTGTGTAAACTACTCATATCTTAAGTAGAAAGAC
TAAANGACGAANCNATCAAAAATAATAACTACAACTTTTCAAGANATAGA
CAGTATAANAAGATATAAATNGAGACANCAAAAGTAATAAAACGTGGGGA
AGGACGAAGTTAAAGTGTAGAGTTTTTATTAGTTTTCTTTNTGCATTAAT
AGTTCGTTTGTTTATGCAATCAGCTTAAAATAACGNGTTATAAGATAGTN
TTTGCAAGCCTCATGGTAACCNCAAANCAAAAAACATATAATAGATACAC
AAAAAATAAAAAAGCAAGAAATTAAAGCATACCACCAGAGAAAATCACCT
TCACCANAAAGGAAGACAGGAAGAAAGGAAAG
>rnd-3_family-61#LTR/ERVL-MaLR ( Recon Family Size = 39, Final Multiple Alignment Size = 38 )
TGTGTCCTCGCTTGGCACAGCACNNATGGTAGGCAGAATTCTAAGATGGC
CCCAAGATTTCCCGCCCTGGTGTAACGCGCCCTGCGTATCCCCGGGACTG
TGAATATGATGGATTTCACTCCTGTNATGTGATATGGCACAGCTGACCTT
AAGAAATGCAGGTNATTTGGGTGGGCCTGACCTAATCACATGAGCCCTTT
AAAAGCAGAGAGCTTTCTCCGGCTGGTGGCAGAAGAGGAAGTCAGAGAGA
TTCGAACTGAGAGGGATTCGACATGANTGAGTTTTTCTTTGCTGAGATGG
AGGGGGCCACGTGGCAAGGANCCGAGGGCGCCTCTAGGAGCTGAGACTGA
TGGCCCCCAGCTGACAGCCAGCAAGGAAACGGGGACCTCAGTCCTACAGC
CGCAAGGAACTGAATTCTGCCAACAACCTGAATGAGCTTGGAAGCGGATT
TTCCCCAGAGCCTCCAGATGAGAACNCAGCCCGGCCGACACCTTGATTTC
GGCCTTGTAAGACCCTAAGCAGAGAACCCAGCCAAGCCAATGCCCGAGAC
TTCTGACCTACAGAACTGTGAGATAATAAATGAGTGTTGTTTTANANCCG
CTAAGTTTGTGGTAATTTGTATTATGCAGCGATAGGAAACTAATACANCA
CTACTAGTCA
>rnd-3_family-721#LINE/L1 ( Recon Family Size = 40, Final Multiple Alignment Size = 37 )
GGGAAATCTGAATANGGNCTGTAGATTAGACAATAGTATTGTATCAATGT
TAATTTCCTGANTTTGATAATNGTACTGTGGTTATGTAAGAGAATGTCCT
TGTTCTTAGGAAATACACGCTGAAGTATTTAGGGGTAAAGNGNCGTGATG
TCTGCAACTTACTCTCAAACGGTTCAGAGGAAAAAAAACTATATATATAT
GTAGAGAAATAATGATAAAGCAAATGCGGCAAAAATGTTAACANTTGGTG
AATCTGGGTGAAGGGTATATGGGNATTCGTTGTACTATTCTTGCAACTTT
TCTGTAAGTTTGAAATTATTTCAAAATAAAAGTT
>rnd-3_family-664#LINE/L1 ( Recon Family Size = 43, Final Multiple Alignment Size = 36 )
GGAATGGCAGAGTAAGGACCTCCAAAAATCCNCTCCTTCACCAAAAGCAA
TGAGAACACTGGCAAAAACTGTCAAAACAACTTTTTCAGAACTCTGGAAA
TTAACCAAAGGCTTACAACAATTCGAGGAGCGTTTATTCAAGAAAAATAG
CCTTAGAATCTCGGTAAGAACAGTAAGCTTTGTGGCGTTTTAACTTGCNC
TATTCCCATCCCCAACTCTCCCCTTTCCAGCTCCGCGGTAGCCTTAAAAA
CCAACGCCGTGAAAACCAGCAGCCTAGCAGCCACTGGAGGGGCAGAACGG
GTTTGGAGCTCCCNCAAAGCCCCATCCCCAGAGAATTGTCACTATTTGAC
CTGTCTGGAGNCTTCCTGGAAGATCCATTCACAGGGCCTGTCTTTATTTG
ACCTGACTCAGAGCTCGCTTAGTGNAACAGCCTTCCCCAGGGCGTTTGCC
GAAAACAATCAGCAGNAATTNTTTAACATCGCAGCTGCCTGAGGCGGCGG
TANCAATTGGGGCAAACAAGAGGCTGGCCAAAAAGCTTAAAAGGAAAAAC
TAGAGGAACGAGAAAAAACAAGAGGCTGACTAAAAAGCTTGAAAGGAAAA
NCTGAGAAATGAGATGTCCACAGGAGACNTTGAAAAGCTCCGACATNTTC
TCGGGAATGTAGAAGGCCACATACATGCGCAGGGCGATGTGCACATGCTC
AGGAAAGACCTGAGAGGCCCTAANCTCTCACCTCTGGCTGACCTCGAGGC
TCTGCACAAGCAGGAAGTGAAGGCTAAGGCAGAGTTGTAAACTGCCTGAC
TGAGTGTTAAANGCATNCCCCAACACACACAGAGCCCCTCGGCAAAGACT
GGGAGACTTATCGGTTCAAGGCATTTAAGAAATCTCTGTCCAATCATTAG
CTGACCACTAAGCTAACCGAGCAGAGACTTCAGTGGCCGCATATGACAAA
GANCAGAAAACAGACTNNAANTTCAGAATTAGTTCAAAATCACTAAACAA
ACAGCAAGAACAAACCCTGGGAAGGAAAGGGGGAATCTGATTTCCAGAGT
TGCCACATTATATTATTTNAAATGTCCAGTTTTCAACAAAAAATTACGAG
ACATGCAAAAAACAAGAAAGTATGGCCCATACACAGGAAGAAAAAGAGTC
AATAGAAACTGTCCCTGGAGGAAGCCCAGACGTTGGACTTACTAGACAAA
GACTTTAAATCAGCTATTNTAAATATGTTCAAAGAACTAAAGGAAANCAT
GTCTAAAGAATTAAAGAAGTATGAGAATGATGTCTCACCAAATAGAGAAT
ATCAATAAAGAGATAGAAATTATTTAAAAAAGAACCAAATAGAAATTCTG
GAGTTGAAAGTACAATAACTGAAATGAAAAATTCACTAGAGGGGCTCAAC
AGNAGATTTGAGCTGGCAGAGAAAGAATCAGTAAACTTGAAGATAGGTCA
ATTGAGATTATCCAGTCTGAGGAACAGAAAAGAAGGAATGAAGGAAAATA
ATAAAAAAGCCTCAGAGACCTGTGGGACACTATCAAGTGTACCAACATAT
GCATAATGGGACTCCCAGAAGAAGAAAGAGGAAAGGGGCAAACAGAACAG
AACATTTTCAAGAAATAATGACTGAATACTTCTCAAATTTGTGGAAAACA
TTGATCTGCACATGCAACAACTTAAAGGAATTCCAAATAGACACATCATA
ATCAAAAAGTCCAAAACCAAA
>rnd-3_family-216#LTR/ERV1 ( Recon Family Size = 43, Final Multiple Alignment Size = 36 )
GCCTTTTGGCCCGCCACGCCCCCCTCATCCTGTACCCATATAAACCCCAA
ACCCCAGGCTCCAGAAGCAGAAGAGGAGACGAGCAGNAGAACAGCGGAAC
GGCAGAACGGCGCGGCAGAGAGAAGAGAAGGAGCGTCTGAATCGCCGAGA
GGAGTTCGGCTGGGGACGGATTCGGAGAGGAGNTCGGCCGCTGGACGGCC
AAACTCCAGGGGAAGATCACCTTCCCACTCCATCCCCCTTCCAGCTCCCC
ATCCATCCCGCTGAGAGCCACCTCCACCACTCATAATAAAACCCCTGCAT
TCACCATCCTTTCAAGTCCGTGTGTGACCTGATTCTTCCTGGACGCCGGA
CAAGAACCCGGGTACCAAGAGGGCACTGAGCTGGTTAACACTTAAGCCGT
CCGCGGATGGCAAAGCTAAAAGAGCACACTGTAACACACGCCCACTGGGG
CTTCGGGAGTCGCAGGCACCCACCCCTAGACGCTGCCGTGGGGCCGGAGC
TCGCCCCGGCTCCTGCACCTGCCCGTCTGCGTGCTCCCCCTCCCGTAAGG
GGTTTGAGCAGCGGGTGGGCCGAANAGGCGAGCCACACCCCTGTCGCACG
TCCTGCGAGGGGGGCCAGGGAACTCTCCCGTTTCA
>rnd-3_family-391#DNA/TcMar-Tigger ( Recon Family Size = 35, Final Multiple Alignment Size = 35 )
AGTCGATCCTCATTATTTGCAGATTCCGTATTTGTGAATTCGCCTACTCG
CTAAAATTTATTTGTAACCCCNAAATCAATACTCGCGGCGCTTTCGCGGT
CATTCGCGGACATGCGCAGAGCGGCGAAAANTTTGAGTCGCCCGACGCGC
ACGTTCCCAGCTGAGGTCGAACAAGGCAACGCTCTGCCTTCTTGTTTCAG
CTCTCATACTGTAAACAAGTGTCCTTTTCGCGGTCTATTTAGTGCCACGT
TTTTTGCATTTTTGTGCTTTTTGTTGGTGATTTCGCTGTTTAAAATGGCC
CCCAAGCGTAGTGCTGAAGTGCTGTCTAGTGTTCCTAAGCGCGAGAAGGC
TGTGACGTGCCTTACGGAGAAAATACATGTTAGATAAGCTTTTCATTCAG
GCATGAGTTATAGTGCTGTTGGCCGTGAGTTCAATGTTAATGAATCAACA
ATATATATTAAATAAGGTGTCTTTAAACAGAAACACATAAAACAAGGTTA
TGTATTGATCGGTTGACGAAAATGTTGTGACCAGAGGCTCGCAGGAACCT
AACCCTGTATTTCCCCTAGGAGCAATGGTTCAGTATTCGCTAATTCAGTG
TTCGCGGCGACTTTATAGAACATAACTACCGCGAATAGTGA
>rnd-3_family-108#LINE/L1 ( Recon Family Size = 39, Final Multiple Alignment Size = 35 )
TTCCGGTTTCTGGTCCGGCACGTAAGGAGCTTGGAAGTCGTCACTCCATC
CTAACAAGTAAAAAGCTGAACAAACTGAAAAATCAACAACTCTTGGAGCT
CAGTAAGGAAGATGAGGTCACAGGGCAAACTGCTNCCCCCAAAATTGGAG
AGACGACAGGCAGATACAGAGAATCACAACTTACCGGAGCAGAAACTCAC
GAGCAGAAACCTCTGCTGAACTGTAATTGACAAATTGCTGGAGGCTCAGT
GTGGACAAGCCTGAGAGTTAAAAACTCGAGGGTAACCAAGTCATGTGGAG
AAGGGGCACACTTTCGTGAGTTTTACCTCCAGGAGTTCTACCAGGTTCTC
GCAGTGAATATCGGAGAAAAATCCCTTCATGCTTCCGGCAGGGGGAGGGG
AAAAGNAACCATTNTGAAATACGCCAGAGCATTCTGTTCTTCTTAACAAA
GCCTGCCCTCAAGAGAAACTGCTTAACCTGCTGGGGTTTTACCAGAGCCT
AACTGACCTGGGGGAAGGGAAATACCCGACTCCAGCTGACTCTAACCTNC
CTGTGGGGGAAGGGAAATACCCAACTCCAGCCNATTCTAGCCATCCTGTC
TCACCTAAGGGATGAAAAATAGGGAAAACTGAGAAGCACTTGTGAAGCTC
ACAGCCCAGGGGCACAGGCTCACTAAAAGACTGAGACCTAATCATAGGAC
TATAGAACGCTTTTCCCTCCCCCTACACCTTACCCACATTACTAAAGGCC
TATTTATNCAGTTNCTTTTACCCAGTACATCATGNNTCTCGGTTTAAAAA
ATAAAGGCCTATTTATCTCAGTTCCTTTTACCCAGTACATCATGTCTAGC
TTTCAAGAAAAAATTANAAGGCATACTAAAGGCAAAAACAAAAACACAGT
TTGAAAGGAAACAGAGCAAGCATCAGAACCAGACTCAGATATGACAGAGA
TGTTGGAATTATCAGACTAGGAATTTAAAATAACTATGATTAATATGCTA
AGGGCTCTAATGGANAAAGTAGACAACATGCAAGAACAGATGGGTAATGT
AAGCAGAGAGATGGAAATTCTAAGAAAGAATCAAAAGGAAACGCTGGAGA
TCAAAAACACTGTAACAGAAATGAAGAATGCCTTCGATGGGCTCATCAGT
AGACTGGACAGAGCTGAGCTTGAAGATATNTCAATAGAAACTTCCAAAAC
TGAAAAAGCTAAAGAGAAAAAAGACTGGAAAANAACAGAACAGAATATCC
AAGAACTGTGGGACAACTACAAAAGGTGTAACATACGCGTAATGGGAATA
NCNAAAGGGAAGAAAAGAAAGGAACAGAAGAAATATTTGAANNAATAATG
GCTGAGAATTTTCCCAAATTAATGTCAGACACCAAACCACAGATCCAGGA
AGCTCAGAGAACACCAAGNGGGATAAATGCAAAAAANCTACACCTAGGCA
TATNATTTTCAAATANAGAAAATCGAAGATAAAGAAAAANNATCCTGAAA
GAAGCTTGGNNAGAGAAAAAATANATTAACAT
>rnd-3_family-67#LINE/L1 ( Recon Family Size = 36, Final Multiple Alignment Size = 34 )
GGACAAAATATATGAAACAATGGTTTTCAAGACACTGGACATCAGGCAAC
GAAGGACAGTGATCCCTGAGAGATGAGGAAACAAACGAGGTGAGCCCTAC
GATTGCCCCAGCTTACTGCCTGGAGAGAGTTTCCAGTCCCAGGCAGGAGC
ACAGAGGAAGGCTCAGGGAGAGCCCAGCAGACTGAGCGAGCTTTTGAGNA
GTGAGAGAGAGAGAACCAAGGCAGCTAGAGTTCGCAGGGCAGAGTACTAG
AGAGGAGAGAGCTGCACAGAGAAGAAGCTCCAGAGATCTGCAGAGGGTTC
CCCTCGAGTNTTCAGCTGAGTACTGATCAGCACATGCGNTGTGAGGAAAC
NACCCAAGGCCGGGAAACAGCAACCCAGGTAGAGGAAACAGTNCCCGGAA
CTCACACAGGGCTGGGAATAGTNCCTGTTCCCACCAGCCAGAGTGGAAAA
CCTCATAATTCACGGGGCATCGGGTAGAGTNCTCAGAAGGGTNTTGCCTC
AGTAGTGGGGTTAAATTAGCCCGACTAAACGNCTGCTCTGGNCCCGCCTA
ACAAATCTTAAAAGCAAGACCCGAAAGGATCAAACTGTTCCCAAGTAACT
TAACTGCGTCCCAGAACAAAGCTCAAGAATATTTATAGGAATACAAAAAT
ATCCAGCACCCAACAAGGTAAAATTCACAATGTCTGGCATCCAATCAAGA
ANTTACCAGGCATGCAAAGCAAGAAATATAACTCATATGAGAAAAAAAAA
AATCAATCGTAAACTGACCCAGAACTGATATAGAATTAGCAGACAAGGAC
ATTAAAACAGTTATTATACTGTATTCCATATGTTCAAAAAGCTAGAGGAA
AGATTGAATGTTAAGTAGAGACATGGAAGATTNTAAAGACCNAATCGAAC
TTAGAGATGAAAAATACGTGTCTGAGATGAAAAACACACTGGATGGGATT
AACGGCAGATTAGACATTGCAGAAGAAAAGATTAGTGAACTTGAAGATAT
AGCAATAGAAACTATCCAAAATGAAACACAGAGAGAAAAATAAAAATCTA
AAACAAAGCATCAGTGAGCTGTGGGACAACTTCAAGCANCCTAACATATG
TGCAATTGGAGTCNCNGAGGGAAAGGAGAGAAAGGGGAGAAACAAANAAA
TTTTGAAAAATAACGGCCGAAATTTTCCAAAATTTGATGAAAACATATTA
AATCACAGATCCAAGAAGCTCAACGAACCCCAAGCACAAGAAATAATTGA
AGGAAACCATATGAAGGCACATTATNATCAAACTNCTNCAACTAGTGATA
AAGAGAAAAGAGACACAGAGGAA
>rnd-3_family-284#LTR/ERVL ( Recon Family Size = 36, Final Multiple Alignment Size = 32 )
GGCGGCCATGAAAATGCGCCTCTCAGATCTCCGACTGCGGGGAGCATAAT
TGACTGACGGCCCCAGCTGCTGCGTCCATCGCCGCGTTTGCGCCGAGGCC
ACGCTTCCCATGGCAATGACTGAGCGCGGCAGGGATACTAAGGCAGGCCC
GTTCCTGGGAGATGCGGACTCTGACGGGCGACTTTTGCGGCCTTGCCGAA
ATTTTCTAGAACTGCGCTGCAGTCTGAGGCTCTTTTCCTTCCTTCCCTNC
CCCTTTCACAGGNGTCAGACCTGCATCGCGGTCTGANGGCTCTTCAGCCC
CTTAGCTCCTTCTCCACTTTTCCCTCACAGGCATTTCCCCTAATAAATCT
CTTGCACGTCTAATCCCGTCTTGGCGTCTGCTTCTCAGAGGACCC
>rnd-3_family-414#Unknown ( Recon Family Size = 32, Final Multiple Alignment Size = 31 )
GGANTTNCCTTGCNCGGGNTTNTCTGGGAATTCCTTGCCTTGCCTGNANN
TTTCTTGCCTGGANTTGCCTGGAATANCNTTGCCATTCCCGGANNTNACT
TGCCTNGAATTTCCCCAAATTGCCTTGCCTGTTATTGCCTCGCCTGGAAT
TTGCCTNGNNTGGANTTGTCGTTGCCTTNCCTTGCCTTNATTTTTGCCTG
AAATTGCGTCGCCTNGAATTGCCTTTCTGGATTTGCCTTGCCTTGCCTGG
AATTGCCTTGCCTTTGCCTTGCCTGAAATTTTCTTGAATTGCCTTGCCTG
GAATTGCCTTGCCTTGTCTTGCCTGGAATTGCCTTGCCTGTTTTTTAATT
ACTTGCCTGGAATTGCCTTNCCTGGAATTGCCTTGCCTAGAATTGTATTG
CCTTGCCTTGCCTTGCCTGGAATTGCCTTGCCTGGAATTGCCTTGCCTGG
AATTGCCTTGCCTGGAATTGCCTTGCCTTGNCTCGCCTGGAATTGNCTTG
CCTGGAATTGCCTTGCCTNGAATTCCCCTGGAATTGCCTTGCCTGGAATT
GCCTNGCCNNTTGGCTTTACTTGCCTGGANTTGCCTTGCCTTTCCTTGCC
TGNATTTGNTTTGCCTGAATTTCCCTCGCCTGGATTNGCCTTGCCTGGAT
TTACCTTGCNTTGCATGGANTTTANTTGCCTATCCCTGCTCCTTGCCTGG
ANTTNCCTTGCCTGGATTTTCCTTGCCTGGAATTGCCTTGCNTGNAATTG
CCTTGCATTGCCTTGCCTGGANTTTTCTCCTTTTC
>rnd-3_family-163#LINE/L1 ( Recon Family Size = 32, Final Multiple Alignment Size = 30 )
AAAGCTCTTCTTTATAGAAGAATGNCAGCAGAAGGAATGATAGAATTAGA
AAATCACCATTTTGCAACCGTCACAGTAANAACTGATTCAGGCAAGAATC
ATCAATGGATGCTAAAACTAGTGGGTGAAAGGTTGATGAGGAACAGGATA
TTTACACAGTCTCAAAGTATCNCCCCACAAANTACTTACTAATTACAAAN
GGAAAATGTAGTANCTTTACAGTGGAGAAATCTGGCAGACACCACCTTAA
CCAAGTGATCAAAGTTAGCATCACCAATANTGGGACAAACTGACATCATG
TGCCTCCTGATGGGATGCAATGAGAGAATCACAGCATCACCTATGTAGTA
TTCCTGCCAAAGAATATTTAACCTGAATCTAATCACGAGGAAGCATCGNA
CAAACCCNAACTTGGTAGAATGGTCAGACATTCCGTAAACAACTGGCCTG
CANTCTTCAAACGCGAGCATTGAAAAGGTGAGACTGAGGNGCTGTTCCGG
ACTAGAGGAGACTAAAGAGA
>rnd-3_family-111#DNA/hAT-Tip100 ( Recon Family Size = 30, Final Multiple Alignment Size = 30 )
TTCATGGGCACGCGACCTGTGCAGTCACACAGGGCCCCGCGCTCAGAAGG
GCCCCGCGCTTGGTTTAATGCTCTGCTGTCGCCGTCTTGAAATTCTTAAT
AATTTTGAACAAGGGGCCCCGCATTTTCATTTTGCACTGGGCCCCGCAAA
TTATGTAGCCGGTCC
>rnd-3_family-80#DNA/TcMar-Tigger ( Recon Family Size = 33, Final Multiple Alignment Size = 30 )
ACCCCTTATCCACGGTTTCGCTTTCCGCGGTTTCAGTTACCCGCGGTCAA
CCGCGGTCCGAAAATAGGTGAGTACAGTACAATAAGATATTTTGAGAGAG
AAAGAGAGAGAGAGAACCACATTCACATAACTTTTATTACAGTATATTGT
TATAATTGTTCTATTTTATT
>rnd-3_family-1152#LTR/ERVL ( Recon Family Size = 33, Final Multiple Alignment Size = 30 )
GAGACAATTCTCCGTGGGTCTCTCGCGTTTCTGCACGTCTTGCGAGCAGA
GGCACTGACNGCCTTTGTTCCGGACTATCTTTTCAAGGATGTTTGTNTAG
CAAACAGCCTTGGAAAACTAGAGATAGTGTCTCCCTCCGGAGCAGAGGNC
AGGTTTGTTTNCAGTCTTAGAAAAGACAATGTCTCCCTCCGGGGCAAAAG
GCTTAGGCATGCTTACTGTCCATTATAAAGATTCGGGTTTCCTAAGCTCG
GGGTTCCTCNCCTGTAACGCAACCCACTGCGTGCGCAGGCGTCACCTGGC
CCTCTTCGTATCGCCCCGTGGGAATTGGGGAACTAGTGCAAGCAAATGCT
GACACTCTGGCTCGCTGTCTGCTGTGAGTAATAAAGTCCTTTGTCTCTGA
CCCAGGAGTCTCGTGTCTTCTGCCAGCATCCATGAAACTGTGGCAGGCTA
ACTTGTTAGCTTGCAAGTAGGGTAAAATCTCAGACCCTTCACAGTTC
>rnd-3_family-94#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 30 )
GAAATGATATGATGTCTGGGATTTGCTTCAAAATAATCCAGGGTAGAGGA
TGGGGGNATAGAATATGGTAACAAGATTGGCCACGAGTTGATAATTGTTG
AAGCTGGGTGATGGGTACATGGGGGTTCATTATACTATTCTNCTACTTTT
TGTATATGTTTGAAATTTTCCATAATAAAAA
>rnd-3_family-210#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 29 )
GGAGGTGTAAACAGACTGTAGCCTACNCTTGTGCCAATCACTGAGTTTCG
GCCAATCANAGGCGGCCAACTGTTCAAACCGTGTCCAAATAAGGCAAACG
CCGAGCCGTAACCAATCCAGCTGTTTCTGTACCTCACTTCCGTTTTCTGT
ACGTCACTTTCCTTTTTCTGTCCATAAATCTTCTTCCACGCAGGCTGCGC
TGGAGTCTCTGAACCTGCTCTGGTTCNGGGGGCTGCCCGATTCGCGAATC
GTTCNTTGCTCAATTAAACTCCGTTAAATTTAATTTGNCTGAAGTTTTTC
TTTTATC
>rnd-3_family-893#DNA/TcMar-Tigger ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
GTCCCCCCTTATCCGCGGTTTCGCTTTCCGCGGTTTCAGTTACCCGCGGT
CAACCGCGGTCCGAAAATATTAAATGGAAAATTCCAGAAATAAACAATTC
ATAAGTTTTAAATTGCGCGCCGTTCTGAGTAGCGTGATGAAATCTCGTGC
CATCCCGCTCCTCCCGCCCGGGACGTGAATCATCCCTTTGTCCAGCGTAT
CCACGCTGTANACGCTNCCCGCCCGTTAGTCACTTAGTAGCCGTCTCGGT
TATCAGATCGACTGTCGCGGTATCACAGTGCTTGTGTTCAAGTAACCCTT
ATTTTACTTAATAATGGCCCCAAAGCGCAAGAGTAGTGATGCTGGCAATT
CGGATATGCCAAAGAGAAGCCGTAAAGTGCTTCCTTTAAGTGAAAAGGTG
AAAGTTCTCGACTTAATAAGGAAGAAGAAAATCATATGCTGAGGTTGCTA
AGATCTATGGTAAGAACGAATCTTCTATCTGTGAAATTGTGAAGAAGGAA
AAAAATTCGTGCTAGTTTTGCTGTCGCACCTCAAACTGCAAAAGTTACGG
CCACAGTGCGTGATAAGTGCTTAGTTAAGATGGAAAAGGCATTNAATTTG
TGGGTGGAAGACATGAACAGAAANATGTTTTGA
>rnd-3_family-132#Satellite/centromeric ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
TCTCAGCGCTTTCTGTGGAGAATCTAAAAACGGACATTTTCAGCNAAATA
CNNGCATATNANAAATAGCANTAAGACTNNCTCTAAAACACAGAAGAAAC
GTATCCTTCAAACTGCTCTGCTGTGCGTTCGTTCAACTAAGNGAGTTGAA
TCTACGTTTAGATTCAGGAGTTAGAAACACGTTTCTNCTAGGAGCTGCGT
TTGGATATTCCNGAGTGAATGGGAGTACATGCTGTATTGAGAAATATCTG
NTTCTAAAACCAAAACGGAGCNACCTAACAGAATGGTCTTCAATGTGTGC
ATTCAACTTACAGAGTTAAACTGATGTGTGTTTGCAGCAGTTTGTAAACC
CTTTCTGTAGAGAAGCAGAAAACGGGTATTTCCAGCCAAATCCAAGCATT
TNAGAAATAGCGCTAAATCTCGCTCTAAAACACAGAAGAAACGTNTGCTT
CAAACTGCTCTGCTGTGCGTTCGTTCAACTAGGGGAGTTGAATCTACCTT
TANATTCACGGAGTTAGAAACGCGTTTCTTCTGGGAGCTGCGTTTGGATA
TTCCAGAGTGAATGGGAGTACACGCTGTATTGAGAAATATCTGCTCCTAA
AAGCAAAACGGAGCAACCTAACAGAATGGTCTTCAATGTGTGCGTTCAAC
TTAGCAGTTTNTAAGCGCTTTCTGTGGAGAAGCAGAAAACGGCTNTTTCC
AGCCAAATCCAAGCATTTCAGAAATAGCGCTAAATCTCGCTCTAAAACAC
AGAAGAAACGTNTNCTTCAAACTGCTCTGCTGTGCGTTCGTTCAACTAGG
GGAGTTGAATCTNNCTTTAGATTCAGGGAGTTAGAAACGCGTTTCTTCTG
GGAGCTGCGTTTNGATATTCCAGAGTGAATGGGAGTACACGCTGTATTGA
GAAATATCTGCTTCTAAAAGCAAAACGGAGCAACCTAACAGAATGGTCTT
CAATGTGTGCGTTCAACTTACAGAGTTAAACNGNTGTGTGTTTGCAGCAG
TTTGTAAGCCCTTTCTGTGGAGAAGCAGAAAACGGCTATTTCCAGCCAAA
TCCNAGCATTTCAGNAATAGCGCTAAATCTCGCTCTAAAACACAGAAGAA
ACGTNTGCTTCAAACCGCTCTGCTGTGGGTTCGTTCAACTAGGGGAGTTG
AATCTAGCTTTANATTCACGGAGTTAGAAACGCGTTTCTCCTGGGAGCTG
CGTTTGGATATTCCAGAGTGAATGGGAGTACACGCTGTATTGAGAAATAT
CTGCTCCTAAAAGCAAAACGGAGCAACCTAACAGAATGGTCTTCAATGTG
TGCGTTCAACTTACAGAGTTAAACTGATGTGTGTTTGCAGCAGTTTCTCA
GCNCTTTCTGTGGAGAAGCAGAAAACGGCTNTTTCCAGCCAAATCCAAGC
ATTTCAGNAATAGCGCTAAATCTCGCTCTAAAACACAGAAGAAACGTATG
CTTCAAACTGCTCTGCTGTGGGTTCGTTCAACTAGGGGAGTTGAATCTAG
CTTTANATTCACGGAGTTAGAAACGCGTTTCTCCTGGGAGCTGCGTTTGG
ATATTCCAGAGTGAATGGGAGTACACGCTGTATTGAGAAATATCTGCTTC
TAAAACCAAAACGGAGCAACCTAACAGAATGGTCTTCAATGTGTGCGTTC
AACTTACAGAGTTAAACTGATGTGTGTTTGCAGCAGTTTCTAANCNCTTT
CTGTAGAGAAGCAGAAAACGGGTATTTCCAGCCAAATCCAAGCATTTNAG
AAANAGCGCTAAATCNCGCTCTAAAACACAGAAGAAACGTCTGCTTCNAA
CT
>rnd-3_family-549#DNA/hAT-Charlie ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
ACTGTGGCTACTAGAAAATTTAAAATTACATATGTGGCTCACATTTTATA
TTTCTATTGGACAGCGCTGTT
>rnd-3_family-71#DNA/hAT-Blackjack ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
GTGCCAGATTTAGCAAATAAAAATACAGGACGCCCAGTTAAATTTGAATT
TCAGATAAACAACGAATATNTTTTTAGTATAAGTATGTCCCATGCAATAT
TTGGGACATACTTATACTAAAAANNTATTCGTTGTTTATCTGAAATTCAA
ATTTAACTGGGTGTCCTGTATTTTATCTGGCA
>rnd-3_family-56#DNA/hAT-Charlie ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
TTTAGAGCAGCGGTTCTCAAAGTGTGGTCCGGGGACCCCTGGGGGTCCCC
GAGATCCTTTCAGGGGTCCGNGAGGTCAAAACTATTTTCATAATAATACT
AAGANGTTATTTGCCTTTTTCATTCTCATTCTCTCACGAGTGTACAGCGG
AGTTTTCCAGAGGCTACATGACGCGGTGATATCGCAACAGATTGAATGCA
GAAGCAGATATGAGAATCCAGCTGTCTTCTATTAAGCCAGACATTAAAGA
GAGTTGCAAAAATGTAAAACAATGCCACTCTTCCGNTAATTTTTGTGTTT
TGGAAAATATTGTTATTCTTCATNAAAANTATGTATTTATTTATGTTAAC
ATGTAACTTANTTTTATTATTTTTAAATCTATGTAAATATTTTAGATTTT
CTCAGTTTTAATTTCTAATACAGTAAATATCGATAGATATAACCCACATA
AACAAAAGCTCTTTGGGGTCCTCAATAATTTTTAAGAGTGTAAAGGGGTC
CTGAGACCAAAAA
>rnd-3_family-18#LTR/ERVL ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
TGTAGTGGACACTGCGATGTGCCGCCCAGATTCCCCTTCAGGANTGAAGG
ACTTATTNCCCCAGCTGCTGGGAGTGCTGCCGGCAGATAGCCCTCAGCTG
TCAGCCCTCTTCGGGAATCGCCTCGCTGCGCTGAAGAGAGCCGCCTCGCC
CAAGGTCACGCCCTTTCCCAGGGCAGCCCGCATCCAATGACTGATCAACG
TGGGAGGTATAAAGGCCTGGCTCCATCCTNCGCTTCCAACTCGGGACAAC
TCTGAAGGGCCATTCTAGCTTCAGAGCTCCCCGTGGGGTCGGCTGAGGCT
TTTGTGAGACTCTGCATCGCACAGCCCAACTCCTCCCTCTGCCCAATCCT
GCTTCCTTCCTCTCNCTTCCACAGGTGATGTTGATCCCAAGAGCACTCCC
TAATAAACTTCCTGCACGCTAATCTCCATCTCAGAGTCTGCTTCCCAGGG
AAGCCA
>rnd-3_family-1119#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
ACCAAAAATAAAATTCTAAGCCCCCCAACCGACTGAATGGACCCCCCCTC
TTTGGGCCAAGGGGATTCCAAAGTAAACCTGAAAAACTAGTTCAGGCCAT
GACGGGAAGNGGGGGTCAGACATGCCTCATTATACCCTCCTCCCTTTGGA
GTTCAGGCACAACTGACCAGCATTAACATTAAAACAGAGATCTTAAGACT
GACAAAACAGACTCTTTGTAGCAATAAGATACCAAATTCCAACCTGACTC
TAGTATAGC
>rnd-3_family-2470#LTR/ERVL-MaLR ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TGCTGAGATGGGGAGATTATCCTGGATTATCCGGGTGGGCCCGATGTAAT
CACAAAGGGTCCTTATAAAGANGGGGAGAGCAGGAGGGTCAGAGTCAGAG
GAGGAGATGTGACGACGGAAGCAGAGA
>rnd-3_family-39#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
TTAATATTTTTGNAAATGGTCTAAACACGCCAATTAAAAGGCAGAGATTG
TCAGATTGGATNTNNAAAGNAAGACCCAACTATATNCTNTCTACAAGAAA
NCCACTTTAAANACANAGANANGTTAAAAGTAAAAGATAGAAAAAGATAT
AATTCTATACAAACATCANAAGAAGNTGAGTGGCTATATTAATATCAGAC
AAAGTAGACTTCAGAGCAAAGAATATTACCAGGGATAAAGAGGAGTATTT
TATAATGATAAAAGGGTCAATTNATCAAGAAAACATAAAAATCCTATAAG
TGTGTGTACCTAGTAACAGCTTCAAAATACATGAAGCAAAAACTGACAGA
ACTGAAAGGAGAAATAGACAAATCCACAATTATAGTTGGANATTTCAACA
CTCCTCTCTCAGTAATTGATAGAACAAGTAGACAGAAAATCAGTAAGGAT
ACAGAAGACCTGAACAACACTATCAACCATT
>rnd-3_family-572#LINE/L1 ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
ATACCTAGGGCCTGGGGGAACTCGCCGCCCTGAAGGGAAGGACACAGGCC
TGGCTGGCTTTGCCACCTGCTGATTGTAGAGCCCCAGGGCCTTGAGCAAA
CATAGGCGGTAGCCAGGGAGTGGTTACAGCGGGCCTTGGGCGAGACCCAG
TGCTGTGCTGGCTTCAGGTCTGACCCAGCGCAGTCCCAGTGGTGGTGGCC
ACAGGGGTGCTTGTGTCACCCCACCCCCAGCTCCAGGCGGCTCAGCAACA
GAGAGAGAAGAGACTCCATTTGTTTGGGAGAAAGTAAGGGAAGAGAACAA
GAGTCTCTGCCTGGTAATCCAGAGAATTCTTCCGGATCTTATCCAAGACC
ACCAAGGCGGTACCTCTACGAGTCTGCAAGAACCACAGCGTTACTGGGCT
TGGGGTGCCCCCTAATGCAGATACAGCTTAGATCACAACACCCAAGTCCC
TTCGAATACCTGGAAAGCCTTCCCAAGAAGGACGGGTACAAACAAGCCC
>rnd-3_family-1006#LTR/ERVL ( Recon Family Size = 27, Final Multiple Alignment Size = 26 )
TTTTGGTACCAGGAGTGGTTCTAGAGGAACAGAATATTAAGGAGGTGGAG
TTCTTTCATTGGTTTGGGGGTTTCTGGAGTTGGCTGCTTAATATGATTAG
ACCCNAAAATGCTAAGGACTCTACTTCTAATAGTATGGAGAACACTGATA
GTCCTTGGCGTGAACTGTTTAGAGAGTTATGCAAAATAAATGCATTTGAC
ACTCCTGATTCACCGCTCGTGAGAGGCAAGGAGTTTAGTGACTCTGTACA
TAATACCTTTGACCATATGTGGAGAACCAAGGAACATAATGAAGTTGGTT
GGTTGCTCCTAANTTCANTGGACAAAGTGATGAAAGAAAATGATGGACTC
AGGGATTCTGTCTCCCGGCTTCAGAAGCAGCATATGAGCCTCAAATCTGC
TAAGATTGCCCTGAGTGAGAGTCTTATCTCCTGTAGAGAAAGAGCTGAAA
TTGTGGAAAAACAGACACAGGCTCTTATCATGCGAGTGGCTGACCTGCAA
CGAAAGGTGCATGCACAGCCTCGCCAGGTGTCTACTGTTAAAGTGAGGGC
ATTGATTGGGAAAAAGAATGGGACCCTGNAACTTGGAATGGGGACGTGTG
GGAGGACCCTGATGAAGCTGGGGACACTGAGTCCNTAAACTCTGATGAAT
CTTTTTTTGCCAGAGGAAGCGGCCTCCCCATCCCCAGTAGTGGCAACATC
CCCTCCCCAACCCANGCTGCCATCAGCCTTTCCACCTTTGTCTGAGGAGA
TNAACCCTGCACTGCCCGAGGCAACAGTGATGGCCTCCCCTGAGGCAGTT
GCCAGGCAAGACAATGCTGATTCTCCTCAGGAGCCACCCCANCACCCCTG
TTTGCTTCTAGACCTATAATTAGACTNAAGTCCCGGCGGGCCCCTAGAGG
TGAGGTTGAGAGTGTGACCCATGAGGAGGTGTGCTACACTCGAAAAGAAC
TGCTTGAGTTTTCTAATTTATATAAACAGAAATCTGGAGAANAGGCATGG
GAATGGATATTAACGGTGTGGGATAATGGTGGAAGGAACATAGAGTTGGA
TCAGGCTGAATTTATTGATTTGGGCCCACTAAGTAGGGATTCTGCATTTA
ATGTTGCAGCTCGGGGAGTTAAAAAAGGTTCTAATGGTTTATTTGCTTGG
TTAGCTGAAATATGGATCAAAAGATGGCCCACTGTGAGTGAGCTGGAAAT
GCCTGATCTCCCTTGGTTTAATGTAGAGGAAGGGATCCAAAGGCTTAGGG
AGATTGGGATGGTGGAGTGGATTAGTCACTTTAGACCTACTCATTCCCAG
CTGGGAGGGTCCAGAAGACATACCCTTCACCGATGCCTTGNGAAATANAT
TTGTGAGGGGAGCACCNGCATCTTTGAAGAGCTCTGTAATTGCTCTTCTC
TGTANGCCGGACCTNACAGTGGGAACCGCAGTCACTCANCTAGAAAATTT
AAATACAATGGGAATAATTGGATCCCGAGGTGGCAGGGGCCAAGTGGCAG
CACTCAACCGTCAAAGGCGAGGTGGGCGTAGTTACCATAATGAACGGCAG
AGGCAAAGCAGCAATCAGAATAGTCTGACTCGCGTAGAGCTCTGGCGTTG
GCTAGTTAATCACGGTGTTCCTAGAAGTGAAATNGATAGGAAGCCTACTG
NATTCCTACTTAATCCGTACAAGCAGAAAACTTCCAGGTCAAGTGGACAA
AAGNCTAACTCGAATTATAAAAACAGAGAATCACGGCC
>rnd-3_family-247#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
ATACAGGAGTTAAAAAGAAATTATTTAGGCAGATAGTGAGGGTAAGAGAG
TCCTCGGTAAGGCTTCCCTTTTAACGAAAAGCAGCCCCGAAATCATTTTC
TTTTCTAACAAAGAGCAGCCTGNAAAATCGAGCTGCAGACATAGATAAGC
AAGCTGGAAGCTTGCACGGGTGAATGCCGGCAGCTGCGCCAATAGGAAAA
GGCTACCTGGGGGCCAGGCATGTTCAANATGGNGGCTCCATCTTCCCTTT
TCTTTGTCANCACGTGTACAGTAAGGAGCAGGCAACATGGCGCCGGCCAG
GCAGAGANCCCATCTGCATAATAAAAGATTAGGGTGGGGCGGCCAGCCTT
CCTCGCGNNCTATGCAAACGNCACACCTGGTCNAACCAATCCTTCGNGCC
CTATGTAAATCAGACACCGCCTCCTCAAGCCCGTCTATAAAACCCGGTGC
ATTTCGCCNCAGGACCGCCAGCAACCCNTTTCTCGGGACCCCTCTCTCTC
TGCAGGAGAGAGCTATTCTCTTTCTTTCGCCTATTAAACCTCCGCTCTTA
AACTCACTCCTTGTGTGTCCGTGTCCTNAATTTCCTTGGCGTGAGACGAC
GAACCTCGGGTATTTACCCCAGACAACGATGCCACT
>rnd-3_family-1778#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
GCTTGACCAAACTTTAGTCAGGCTCCTGAACCTTCTCCTAGGCCCATCTG
TGTNCTTCCTTGTAAAATCCAGTTTTAGCAAGAATCCTGCTAAGTCAGTT
TAGCGAGAATCCCCCACCCTCGATATCTGATCAGGTTCCTCATCCTCCAC
CATCCCCCAGGTGATGTCTGATCACCCTGGCCTGCCTTCAGCAAGAATCC
TGTTAGGTCGGTTTAGCCAGAATCCCCCTTACCCCTGATGTTTCCTCTTA
GTAATTTTCCATCCACTGACCCCCACCCTGCTCCTTGGCTATAAATCCCC
ACTTGCCCGTGCTTGAGTCGAATCCCGTTGCAGCGGTCCCTNCGCCTATC
GCGACGGTCCTGAATAAAGTCTTCCTTACCATGCTTTCAACAAGCGTCAN
GANTATTTTTACA
>rnd-3_family-658#Unknown ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
ATCAAGGCAGTTCNNTGCAAGGCTATTCCGGGCAACATTCCAGGCAAGGC
AATTCCAGGAAAGGCAANTCAAGGCAATTCCAGGCAAGGCAATTCCAGGC
AAGGCAATTNCAGGCAATCCTCCAGGCAAGGCAATTCCAGGCAAGGCAAT
TCCAGCAAGGAAATTCCAGGCAAGGCAATTCNAGGCAANTCCAGGCAAGG
CAATTCCAGGCAAGGCAATTCCAGGAAAATCCAGGCAAGGCAATTCCAGG
CAAGGCAATTCCAGGCAATTCNAGGCAAGGCAANTCCAGGCAATTCCAGG
CAANGNAATTCAGGCAATTCCAGGCAAGGCAATTNCAGGCAATTCCAGGC
AAGGCAATTCCAGGCAAGGCAAGGCAAGGCAATTCCAGGCAAGGCAATTC
CAGGCAAGGNAATTCCAGGCAAGGCAATCCAAAAGGCAATTCCAGGCAAG
CNAGGCAAGGAAATTCCGGGCAAGGCAATAAAGGAAATNCANGCAATTCC
ATGG
>rnd-3_family-194#LTR/ERVL ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
CCAGCTGCTGTGGGNGTTGGCTGCCAACGGCTCACAGCTGCCCCCTTCTC
CGGAGAATGCCCTCGGCCGACTGGAGCCCTTCACCTAAGAAATGCCGACT
TCCGACTGCCCATNCTCACCCAGGGCAGCCCGCAGCCAATGACTGACTGA
TGCGGGGGTACAAAAGNCCGGCCCCCTTGCCTCAAGGTGGGACNAACTCT
GCGGTGCNATTCATGCTCCAGAGCTCCCCGTGGAATCAGGCCGAGGCTGG
NCTCCAGCTGAAACCACATCCTTGCTTAGCTTCTCTCCCTGCCCTATCCT
GCTTCCCTCACTCCCTTACAGCTTCTCCTGGAGCACTCCCTCAATAAATC
ACTTGCACAAGAATCCCCGTCTCAGGCTCTGCTTCTAGGGAACCCGACCT
AAAACGCTCAGNATTTCTGGG
>rnd-3_family-891#DNA/TcMar-Tigger ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
TACAGACGGTCCCCGACTTACGATGGTTCGACTTACGATTTTTCATTTAC
TTTATGATGGTGCGAAAGCGATACGCATTCAGTAGAAACCGTACTTCGAA
TTTTGAATTTTGATCTTTTCCCGGGCTAGCGATATGCAGTNTAATACTCT
CTCTGTGATGCTGGGCAGCGGCAGCTCCAGTCAGCCACGCGATCANGAGA
GGTAAACAACCNATACTCTACAGTGTACTGCGTTGCCAGATGATTTTGCC
CAACTGTAGGCTAATGTAAGTGTTCCGAGCACGTTTAAGGTAGGCTAGGC
TAAGCTATGATGTTCGGTAGGTTAGGT
>rnd-3_family-779#DNA/hAT-Blackjack ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
TGTCCCGGTTTGCCCGGGACAGTCCCGGTTTACGCCTGTTGTCCCGGCAT
AATTATTAATAGTCATGCCCTTTCACTCTCAAAAGTGTCCTGGTTTGGAT
GATAAATTATATGGTCACT
>rnd-3_family-72#LTR/ERVL-MaLR ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
GCTGTGGCAGGCAGACCCTAAGATGGCCCCCAGTGATCCCCACCTCCTGG
TATTCACGCCCTTGTGTAATCCCTCCCCTTGAGTGTNGGCGGGACCTAGT
GACTCGCTTCTAACCAACAGAATACGGCAAAGGTGATGGATGTCACTCCC
GTGATGACATTATGTTATAGGTCTCCCTCTCAGCTAGAGACTCCCTTGCT
GGCTTTGAAGAAGCAAGCTGCCATGCGNTGTGGGAGAGGNCCACGTGGCA
AGGAACTGCGGGCGGCCCCTGGCCAACAGCCANCCGGGAACCGGAGGCCT
CAGTCCTACAACCACGAGGAACTGAATCCTGCCAACAACCCTATGAGTGA
GCTTGGAAGTGGATCCTTCCCCAGCCGAAGCCTCAGATGAGACCGCAGCC
CTGGCCGACACCTTGATTGCAGCCTNGTGAGACCCTAAAGCAGAGGACCC
AGCTAAGTNCTCCACAGAAATGTGAGATGANAAATGAATATTGTTTTAAG
CCGTTAAGTTTTGGATAATTTATTACATGGCATAAAAAACTAACACAGAG
AGGAACCCAGANCAGGAAGAGCTNGTACAGNTCCT
>rnd-3_family-165#Satellite/centromeric ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
CCGAGTGCCCACCTCANGATCTGAAGCGCCCTCCTCCTCCAACCGATCCG
ATCAGGAAAGCCGGCTCAAGGAGGTTCNGAGGTCAGAACTGTCNGGCTCC
TGNGCTGCTTGTGGCACGCAGCCTCCTTCCCGGGACTGCCCCGGGCACCG
CCTCCANCATTGTCCTGTNCGGCNGCGGCNGGANAGCGCAGACACTGCGG
CNNNCCANCCGGGACCGCCAANGCGCATGCGCAGGCGGGCCGTCACAAGC
GCNAGCGCCNNGCCGGGCTCGCGTCACAGTGACAGCCNCCGTNGCCTGGG
GAACCGTCTCAGCGGCTTGGGAAAGCAGGGGCCCNCTGCGGCAGTGCCTC
GNCGTTGGGCGACGGCCCCCCCTCTCACGGCGATCGTCGCCACGGTCCCG
CGATTTCAGGAATCCGGCNTGGCNGAACCAGGNTGAGAAAACGTCCGGCG
GAGGCTTCAGGGATGCCCAGGGCGATGGATCCCCAAGGATCCCTACGGTG
CTTCAGGCCTGCCCAGACGGTGTNGGGGTGCGTCTCCTTGAAAGCCGTCC
CGGCTGGGATTTNCAGGTAAGGTCNGCCTGCGTGCTGCGGGGCTGGCTCT
CTCTATCCCCGAGGGGCTTCCCGGAAGAGAGCAGAACCCCGCAGCCTCAG
GGGCTGCCTGTTANTGTNTGNTTTCTCCGCGCGNGTCTGTGTGTGCGTGT
NTNTGTGTGTCTGTGTGTGTGTTTGTGTGTGTGCATGTGTGTGTCTGTAT
GTCTCCGTGTGTGTTCATGTGTGTGTGCGTGTGCAGCTGTGTGCTCGACA
CGAGTGTGGCCAGTGCACTCCAGCGCGGTTTCTCTGTAGTCCGCCTACCT
TCTGGTGCACGTGTGTCCTTGGCCCAGCTTAGGGGCTGTGGGGCCCCGCG
TTCGTTATGTTGCTCCTGGTTTCTAAAGCCTCAGTGTAGTGGGGGTCTGG
CTCCCACCCGCAGGCCTCCTAATCACCTGCCCATCTTGAGGCGGGTCACT
CCTCCAGAAANAAGACGGGCGCAGCACACCCGNAATCAANCTCCTCCANG
GGCCCTTGGTCCTGCGGCGCATCTAGGGCTGGCTCCCGTCCTCAGGACCC
CTTGAGGGACTACGCTGNTGTCCTTAAACTTATGTGTATTTCCTCTACTT
AGGATTCTTGTTAAAAGACAGATTGTNATTCNTGTGTCGGAGTGAGCCTG
AGATTCTGTATTTCTTGTAGGCACTCAAGGACCAGGGATGCCAGTGNTTA
TGGGTCNTGATTGACGTTTGGAGGAGCAAGTCTCAGTATTGTTCTTTNGA
AGTAAGAATTGTAGATGTAGAGTCTGCATTTAAAGGCCTCTTCTGAATAT
NGTCTTCGTTTTTCTTCCTAATTACTTTGGTAAGATAATTAAAACACTCA
TTGGCAATATAGATGGAAACAGATAGATAGTTCCTAAATTNACTTTATTT
TGAATGACTNATTTAGTTGACTCTTGGTTATCTAGGGACAGATTANATGG
TATGCAGTTAGCCATGGGATGAAATCACAGTGGGCTTGGTATCATGAANA
AGTGAAATANCAGTAATGTAAGAAAACATTAATATATTTATAGTATCATG
TCTTTCTGTTNAGAATCATTTGGTACCTACTCTAGCTTGGGAATGTTCCT
TGATCTCAGCTGTCTGAGTAATTTTTGGGAGCAGCGCCTGCTTTCTCTTC
CAGTCTCTAAGGAACAGTGGTCTGCATACGGGAACGGCAACATCTATACA
GAGGCTGTGCTGTGATTGGTGGAGGTTTCTAACATATTGGCTGCAAATAC
TCAGGTACTTACAGTTCTTTGTAAACGTCTGTATGCGTTCNTTGAAATGG
TAAATATATTCTGAACTATAGGACGTGAATTTTANCTGAATTAGTTTAAA
ATGATCTTTTNTGNGGCATTTTAATTGGTTTTACNTTAACCCTAGGACTT
AGGATATGTGAGACCTTTTCCTTCTGCTCTTCTTTTGTTGCTNAGAAATT
ATTNCTTTNCATAAACACGAATGCACCTGCATACATGTGGGCAAACAATG
TGTGTAGTATGATCCCAGGNTNAGCATTTCAGCTGTAGAAGTCATNTGTG
ATAAGTTATGAAANCTTACACGCTCTGAGTAAATCCTAATGATGGACATT
TACGAAAGTATGTATAAAGTATATTTAATTTGTTACTTTTTATTTCCTGT
GGCATAAATGGTCACAAAATACAGTGGTCCNATATAGTATTAATNAGAAA
TAGNTAAGTTTTCAAGCACCTTACTTAAGCAATCATGTTGAACAGAGGAA
ATTTATTTTTATCATTAATTAAACATTAGATATATGTTTGGATTTTTCTT
TTCCAGAGAACCAGNGGAGGAAAACACGGCTTCNTTCCTGAGGGAGAAAA
ACATGAGGTTGGAATAAGTTAAGCACGTTTCCACAGCGTTANNTTTGAGA
AGTTTTCTTNCTTAAAATTGTTCCCTCATATCCTTCTCNTGNTTTCTGTT
GTNTTNTTTTNTCANCCCTCGTATGGCAGGAAAGAGTTCCTAGAGAGAGA
AGACAAAGGCGGTCTGTGTTNCAAAAGAAGCCCTAGGCTGAAGATTGAAG
AACCGAATGTGCNACATTGCAAGGGANCTGGAGACAANGAAAATCTTGTC
AGGTAAGTTGGNTGCTNAAACCTNGTCTTNACGGGATNAANNNTCCGTGT
TNATNATTTNCTCATCACAGAAAACAAGTGAAACNTAATNGCAGNGTAGG
GCCTTTNTTAAAGTATGNTTTAGTGGAAACANTACTTCAGAAACAGGTTT
CANCCACTGATTAACCTCCAACAGATGGTTACACTCTGGGTTTAGGTGTN
AATAAGAGTGACAATCTGCATTTTTAACANAGGGAATGATTTNTCTCTTG
ACAAGGNANGTTGACAAACTTCTCTGTATANAGGCCATGAAAGCGATTTG
ATCTAAACACTTTGTACCAAGGTGATGATGTTTTNTGTCAAAACAATAAA
GTTACTAAGCTCTGTTAGTATTTT
>rnd-3_family-303#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
ATCTTCCCAGTGGGCAGAACTTCGAGCAGTACACCTGGTCGTNCACTTTG
CNTGGAAGGAGAAATGGCCAGATGTGCGATTATATACTGATTCATGGGCT
GTGGCCAATGGTTTGGCCGGATGGTCAGGGACTTGGAAGAAGATGATTGG
AAAATTGGTGACAAAGAAGTCTGGGGAAGAGGTATGTGGATGGACCTCTC
GGGAGTGGNCANAAACTGTGAAGATATTTGTATCCCATGTGAATGCTCAC
CAAAGGGCGACCTCAGCAGAGGAGGATTTTAATAATCAAGTG
>rnd-3_family-735#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GAGAGGTTGACTACAAAGGGGTAGCATGAGGGAATTTTGGGGGGTGATGG
AANTGTTCTGTATCCTGATTGTGGTGGTGGTTACATGACTATGCATTGTC
AAAACTCACAGAACTGTACACCAAAAANAGTGAATTTTACTGTATGTA
>rnd-3_family-647#DNA/hAT-Blackjack ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
GTGGTTTGCCCGGGACTTTCCTGGTTTTAGCACTGAAAGTCCCACGTCCC
GGGAAACCCCTCAGTCCCGGGCAAACCGGGACGGTTGGT
>rnd-3_family-794#DNA/TcMar-Tigger ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
AAAAAAAATGGATGATGGTTGCGTCTGTACTGAACATGTACAGACTTTTT
TCTTGTCATTATTCC
>rnd-3_family-9#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
CTACACAATAGTCACTACAGAGCACTCCACCCAACAGCAGTCACTATAGA
GCACTCTACCCAACAACAGTCACTATAGAGCACTCCACCAACAACAGTCA
CTATAGAGCNCCCTACCCAACAGCAGTCACTATAGAGCACCCTACGCAAC
AACAGTCACTATAGAGCACTCTACTCAACAACAGTCACTATAGAGCACTC
TACCCAACAACAGTCANTATAGAGCACCCTACCCAACAACAGTCACTATA
GAGCACCTACCCAACAACAGTCACTATAGAGCACTCTACCCAAAAACAGT
CACTATAGAGCACNCTACCCAACAACAGTCACTATAGAGCACCTNCCCAA
CAACAGTCACTATAGAGCACCCNACCCAAAAACAGTCACTATAGAGCACC
TACCCAGCAACAGTCACTATAGAGCACCCTACCCAGCAACAGTCACTATA
GAGCACCCTACACAACAACAGTCACTATAGAGCACTCTACCCAACAACAG
TCACTATAGAGCGCTCTACC
>rnd-3_family-711#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 19 )
TCTTGAGATGGGGAGATTATCCTGGATTATCCGGGTGGGCCCAATCTAAT
CACACGAGTCCTTAAAANCGGAGAACCTTTNCCGGCCGAGNCCAGAGTCA
GAGAGATGTGATGGAAGAATGACTCGACCTCACCATTGCTGGCTTTGAAG
ATGGAGGAAGGAGGCTATGAGCCGAGGAATGCAGGCGGCCTCTAGAAACT
GGGAATAGCCCTCAGTTGACAGCCAGCAAGAAAACGGGGACCCTGATCCT
ACAACCACAAGGAACTGAATTCTGCCAACAACTCNGAATGA
>rnd-3_family-106#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
AGGAGGCAGGGACTCNACTCCGGAGGCGGGGCTCAGACACCGGACCAGAT
TGAGGACTAGCTAAAACAGGGCCGGGGCGGAAGCAGCTTTCCGTAAGACA
CGCCCACCAGTGCCGTGTCAGTTTACCATTGCCATGGCAACACCCGGAAG
TTACCGCCCCTTTCCATGGCAACGACCCGGAAGTTACTACCCCTTTCCCT
AGAAANNTCCNCANAANNTTCCAGTACCTTCAATTTGCATAACCCGCCCC
TTAATTTGCATGTAATTAAAAGTGGGTATAAATATGACTGCAGAACTGCC
TCTGAGCTGCTACTCTGGGCGCACTGCCTATGGGGTAGCCCTGCTCTGCA
AGGAGCGGTACCTCTGCTGCTGCTGTACNCTGCCGCTTCAATAAAAGTTG
CTTTCTAACACCGCTGGCTTTTCCTGGGCGAAGCCAAGAACCCTCCCGGG
CTAAGCCCCAATTTTGGGGCTCGCCTGCCCTGCAA
>rnd-3_family-733#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
AGAGAAAAGCAGTCCCTGACATCCGGGAGCTGGCCTGGCACTCACAGCTA
GGCCTCGGCGTTNTTAGGAGCTGGCCTGACACTCACAGCTGGACCACAGC
TAGGCCNCGGTGTTCTCCTGTTGAACGTAAACAATTTCACAGAACACCAA
CATCAGACAAGGCCACTCTGTGACCATGATGGAGCGAGACAAAACAAGAC
CACTTTGTAATCATGTCTGAGCACAGACGAAAACAAGAACGTTGTCCAAA
CCACAAAATGNCAAACATCCCCCTCTCCCGGCTAATATGAGTGACTGCTG
CTTCTTTACCAATTACAGCTTTGGCCTCACTCTACTCTCCCCTCCCTGTG
AAATTACCCCCGCTTCCTGACAGCATCCAATCCAGAGCAAAGCCCTACTT
CCTTAAACCCTCCCCAAAATCACCTAACCAAAGCCCAAATCCTATAAGAA
GTTCTNTTTCTAACACCCTCTTACTGAGACGCCCCATAGTTCCCCACGAT
GTGCGTTCTCCCTCACTGCAACGAGTAATAAACCCAACTTGTTCAGCTAC
AGGTGTGTTCCTGGTGGTCTTTGGCTAGAGGGCATTG
>rnd-3_family-251#DNA/hAT-Charlie ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
CATAATGAGGTGCCCCAAGGCAAAACTATTGCGATAATAATACTAAGATG
ATGTTTGCCTTTTTGCTAGGTTCACAAATCCAACAGTGGATATACTGCTG
GAACCTCATTATGAATCAAGGCAATGACATCAAACTATTATTAGTCAATG
TATTACTGACTGCCACACACTTACAGTTGAAGAAAGAAAAAGACAGTTTC
AGTAAAAAATGTGCTTGAGGAAGCAGTAAATATTATTTAGTAAATTCTTC
ATGTCTTGTAAATAAATATTCAGTGACAAAAGGGAAAATAACAAACATCT
GTCACAAAGTAAAATAATCNAGGGGAAGCACTTGTTTGATGACTTGAGTT
GCCAGCTGAACTNGCTGCACCTTTTTCATAGAACGCCATTTTTACTTGAA
AGAACAACTAGAGNAAACNATGATGTNTCAGGACTTGGGTATTTGGCNGA
CATTTTCTCGAAAATGAACAAAGTGAGCCTTACTTCAAGGAAAACAACTG
ATGGTATTTGTTGCCAATGATAAAATTTGAGCTTTCAAGCGAAAATTTAG
AATTTTGGAAAACTTGTCTNCCACCGTAAGCTTGACAGCTTTCCNATACT
TAAAGACTTTTTCTGATGAGATTGGATGGTGATTTTAACGAATGTGATTT
TTAATATTATATAATAAAATACGTCAACGTTTAGAAGATNTGTATAANTC
AGTAAACCNGTATTTTCCAAATGACCAANGCGCGATGTTACAAAGTCATA
CATGAGTAAAAGATTCGGACCAATGGATTTAAATATAACAGAGTAAGAAA
TATTNATATAGTTTAAGAATTCTCCACTTACTACAGCTAACCTTTAAGAA
AAACAACCATTTGTTTAATTTTGGTGTAGTATCAAAGAAGAATATCCACA
ATTATCTGAAAAGGCTATTAAAATACTNCTTCTCTTTTCCAACTACATAT
CTGTGTGAGGCTAGATTTCTTTTCATATACTTCGCCAAAACAAAACATAT
CACAACAGACCGAATGNAGAAGCAGATGTGAGAATCCAGCTGTCTTCTGT
TAAGCCAGGCATTAAAGAGATTTGCAAAAATGTAAAACAATGCCGTCTAT
NTCATAAANATATTTTTTATTTAAACATGTTATTTATGTTAACATGCAAT
GATTTTGTTTTTNATAAATTAATTTTAATTTCTCAGTTTTAATTTCTAAC
TGAAGTAAATATTTACATAGATATAACCCACATAAACAAAAGCTCTTTGG
GGTCCTCAATAATTTTTAAGAGCGTAAAGGGGTTCTGAGACCAAAAAGTT
TGAGAACTGCTGCAACAGAGATCTACAATCAAAGCCAAAAGTTGATTCTC
TGAAAATAATTTTAAAAG
>rnd-3_family-830#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
GGTGGTGGTGGCCACGGGGNGAGGCTCCTCTGCCTTTGGAAAGGGGAGGG
AAGAGTGGGAAGGACTNCGTCTTGTGGTTTGAGTGCCAGCTCAGCCGCAG
TACAATAGAACACCAGGTAGACTTCTAAGGTTTTTGACTCTAGTCCCTGG
CTCCCGGATGGCACCTCTGA
>rnd-3_family-422#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
AAGAGTAGGTAGCTAGGCAGGCATGAGCAGGGCAGGAGAGGCCCCCACCC
CCCGCCCCAGGAATGTCAGGCGACCATCAGGTGATGGTCAGGCGGTTGTT
AAACTGTCTCTCTAAAATAGTAATTGGTCGCAGCCGGCGCCAGGGAAAGG
CAGTCTCCCAANAGCAGAAAACACCTGAAGCTGGTGATCAGCAGCTTCCC
GATAAGATCTCAGGAGTTGGGCGAGTGGGCTCAAGCATGCGCACTAAGAG
GCAAAATGGCAGAGTTTAACTGGCATATGACCTTCCTCTAGGAACGCTCG
ACTGGTAAGGGNAAAACGCCTCAAGTGAGCATGCGTACAACTTCAGTAAA
CACGCTGCGCATGCGGCCCCTCCCAAGTGCTGGCAGGCCACCGCGCATGC
GGACAGCCCACCCCAAGGGAAGAATCAGGGGAGAAGAGACGCAAACCCCG
GAAGCACGCCAACGTATAAAACCCCGAGTCAAGGGTCAGACAGNGCACTT
GGATCTCTCAG
>rnd-3_family-282#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
GGCAGGACTCCAGCCNGCGCGGAGCCCAGAGGGTTTGGTGTGGGAACATC
TGTAGTGGAGCACGGCCAGGGATGCCCATCCCCCAAGGCTTGCCNTGTTC
CCCTAGGAGGCTTTAGCCTTAGGGGGACTATTGGACCTGAACAGAGCAGG
GTGGTCTTGCCCGCGAGATNGGGCCAGTCCGATCTGAGCGACCCCCCGTC
TGCCGGCCTCTCCCCGGGCCCCAGCCTGGCTGTGCCCGCTTGCAGCACAG
CCTCGGATGCCCAGCNGGGGTGCTTCCNGGGGGTCCTCATCATAGCTCCT
TCACCGGCGGACCGTGCCTGACCAGCTNCAGCAGAGAGNTCCTGCCAATA
TGCAGCACATACACACACCGCTCCCACCCTCAGCANACACGCNCGCACTA
CAGCCTCCCACTGCCNTTGCCCACCGCGGCCTCCCCCACAGCCCTGCCGG
CGNGCACTTGCCCGCAGCCACCCCCGTTGCTTTGCCAGCGCTTGCGCGTG
CAGACGGACNTTGCTTCCCCTTCCCCGCCAGCGTGCGTGGTGCGTGTGCG
NNTGCGCGCGTGCGCGCGCGTGCACCCCGCNATGCCACTGCTGCATGNTT
GAGCACACTCCAACCCAACCGCGCTGCCATTGCCAGCACAAATGCACGAA
CACAGTGNATGCTAACAACACTGACTGCCCATCAGCCCCANGACCTCCAN
NTGCAGCTGCTGCTAACATCACTGCCGGTGCGAACGTATGTACAGAGATC
ANCAACCCGCCCCCACCCCGGGCCGCTACCGCCACTACTGCNAGCATACG
TGTCGCAGAGGCGTGGCGGCCCTGCACTCCTCGGTACCCCACTCCTGTGC
TGCGGCTGGTCATGCACCACGCACAGGNATGCTGGACANCCCTACTCCCA
CTAGTACCCCACNCCAGCCGACGCGCGTGCACCCCGCCACACTGCCGNNG
CTGCTGGCATGCATGAGTGAGCACGGATCCCGCTGCCACTACCCCGACGA
AGTACTTTGGCCGGCACCACCCGTCGGAGTGCTGTGGCCAGCGGNCCGGG
AACACCTCGGCCCCTCCAGCGCAGCAGGTTCTTAACCTCGAGGGGCCAGA
GAACAAAGCTGNGGGNCCCGGTACCAGCCCTCCAGAGTTAGAGCACACAG
CCCAGGAGTGCTGAGCTGAGCCTTGGCCCCCTGAAATCTTCCAGAAATGA
AGCCAGTCGACTGAACCCANCTTATACCACGATCAAACCCCAAGNGCATC
AAAGAANATAAAAGCAAAAC
>rnd-3_family-981#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
TCATGGCGGATAGGAGGCAGGACTAGATTGCAGCTCCCACTCGGATGGAC
AGAGCAGCGTGTGGAGGCTCGCATCGTGAACTTTTGCTCCAGAACAACTG
CAGGAACGNANCAGGAAAGCCGAGAGAACCCACAGACCCTCTGAAGGAAG
CGGANTGCTCCTGCAGGACCCGGGAGACACCCCAAATACTGTGAGTGCCC
AAACTGTGGAAGTGGGAAAGGGAGATCGTCCGCCCCCGAACACACACCCC
ACTGGAGAACCTGAAGGTCTAGNTCGCGGGAGAAGNTTCTGACCTTACCT
GGAGCTGAGTCAATTTAGAGAGCCGAGCGAAATACAGGGGTAGAGGAAGC
AGCAGGAAAAGCCCTGTGGGCTCGCTGGGTCCCCAGGNAAGCCATTCCTG
CCTTGCCTCACAGGGGTCCTTGGGGAGGGCGGCCAGAGGNACTGGGAAAA
GGCCACAGGGAGAAGGAAACCTCCAGCTGAACTTTGTAACAATTTGAACT
GGGCGAGAAGCCTCCTGGCCAGAACTCGGGGGAGGGTGTGAATCCGGTGT
GCAGACTCCACAGGCGGGGAAGAACGAAAGCCCTGCTTNCTTTCGCAGCT
GGGAGGCGGGTAGCCTGGGGCAAGTTCTCAGCCCTGCTCGCCCGCCGCCT
GGAAACAGACTCGGTGCTGTTGGGGGGGGGCATGGTGGGAGTGAGACCGG
CCTTTTGGG
>rnd-3_family-377#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AAGCCGTCCTCACANGGTTAACAAGAATTACGCGGTTCTGGACAGAAATA
TNGTTATAATTAAGCATTAATCAGGCTGCACTTTGGCCCACTTCCTTGTN
GCCGAAAGTCACGTAGCANGCACTGATACTGACCATTTGCATCTCCATTG
TTCCTATAGATAGGATTTCTGACATTAGGATCATAAGNCTTTTACACAGA
ACTGATTTGCGTCCCCATTGTTCCTATAGACAGGATCTCTGACATTAGAA
TCATAAGGCTTTTGTTTAAGGATCGCTTAAGATGTTTTTCAGATCCCGAA
TTCCAGCGGAACGGCTGACGCCAACCAGCTTGAAGACCCCCCACAGAGGA
ACGGGAATCAGCACGAGAATGCAGTTTCTTCATCTCCCTGTCCCACGACT
TCACCCTGCACTCTTCGACCAATCAATGATCTCCATTACCCTTACAAACC
CTAGCCCCGAACTCCTCGGGGAGACGGATTTGAGGTTTCCTCCCATCTCC
TCGTTCGGCNGCCCTACGATTAAACCTCTTTCTCTGCTGCAACCCTGGTG
TCTCGGCGTATTGACTTGCTGCGCGCATCGGGCAATGAACCTATTACAGT
TA
>rnd-3_family-1116#DNA/TcMar-Tigger ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
ATGGATTAAAAAATACAGTATTCGTGAAATACGCATATACGAGAAGGCCG
ACTTTTCGTATATGCGGGTTCCGCAGGGCCGACTGCGGGACTTGAGTATG
CGTGGATTTTGGTATACGCGAGGGGTCCTGGAACCAATCCCCCGCGTATA
CTGAGGGACGACTGTATT
>rnd-3_family-295#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TGGGGAGCGACTGCTTAATGGGTATGGGGTTTCCTTTGGGGATGATGAAA
ACGTTTTGGAACTAGATAGAGGTGGTGGTCGCACAACATTGCGAATGTAC
TAAATGCCACTGAATTATTCACTTTAAAATGGTTAATTTTATGTTACGTG
AATTTCACCTCAATAG
>rnd-3_family-237#LINE/L2 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
GTCTATATGNTGACAACTCCCAAATTTATACCTCCAGCTCGGACTTCTCC
CCTGAACTCCAGACTCACATCCAACTGCCTNCTCGGCATCTCCGTGTCTA
ATAGGCACATTCGACACTAAANCTNCCCCAAACCTAACTCTCGCTTCCCC
GCAACCTNCTTTTCTGGAAGCTGTCCTATCTCAGCAAGGTGATAACNCCA
TTCTTCCAGTTNCCCAGGCCGTAAATCTNATGCTCATTTTTGACTCCTTT
CTTTTCTCTCATACCCACATCCAATCCATCAGCAAGTCCTGTTGACTCTA
CCTNCAAAATACGTCCCGAATCCGACCGNTTCTCACCGCCTCCACCAGCT
CCAACATCCCATAAGCCACCGTCATCTCCTGCTGGGCTGCTGCAATAGCT
CCCTAACTTGCCTCCTTCATTCCTCACTTGCTCCCTTNTAATCCATTCTC
CACACAGCAGCCAGAGCGATCCTNNTAAAGCATAAGGTCAGATCATGTCA
CTTCTNTNTCAGAACCCTCCATGCAGCTTCTCATCTGCATTTATAAAAGC
CAAANTCCTTACCATAGTCCATATTCCCTTCCCCACTCCAGCTCACTCTG
CTCATCTCCTTGTTGGTTGAACATGCCANGTATGCTCCCTGNCTTCAGGG
CCTNCGTGCTTGTTAATNTCNCTGCCTTGAGTGCTCTCTCCCCAGATGTT
CGCATGACTTGTTCACCTACTTCCTT
>rnd-3_family-2122#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 17 )
GCAGAATAACGGCCCCCAAAGATGTCCACGTCCTAATCCCCGGAACCTGT
GAATATGTTACCTTACATGGCAAAAGGGACTT
>rnd-3_family-809#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AATGGCCTGAANTCTNAACGTACTCCCCGACCCACATACANATCGTCAAC
AGAGAATTGAAACTNTANTAGCTCGAGGTGTTTAAATACAACCACTGACC
AATNATTGGCTGANCANTAAACTATGTTGACATAGGNGCGACTCCTAGGA
AGCAGGCTTAAANANAAAAATAAAAAAGAAAACAAGCAGGAGCATCGAGG
CCATCATTTGGGGAGACAGACTTTACAGATTNNGTCCAGGCGAGTTATTA
AACAAACAATAACAANTCCCTCAGGGGAAAAGTAATTCAGAGCTGCTANA
AGTATAGTACCTAAAATACGTCCAGTTTTCATTTNAAAAAATAATTACGA
GACATGCAAAGAAACGNGAACTGTGACCCATACNCAAGANAAAANNATGT
CAATAGAAAACTGNCTCTGAGAGGNCCCAGATGTCGGATTTAGAGACAAA
GGCTTCAAAGCANCTNTTATAAATATGTTCAAAGAACTAAAGAAACCATT
TTAAAGAATTAAAGGAAAATACGATGACAATGNCTCANCAAATAGAGAAT
ATCAGTAAAGAGATAGAAATTATAAAAAGNAACCAAACGAAATTCTAGAG
CTGAAAAGTACAGTAACTGAAATGAAAAATTCACTGGAGGGGCTCAANAG
CAGATTNGANATGGCAGAAGAAAAAGTCAGTAAACTTGAAGATAGATCAA
TAGAAATTATCCAATCTGAAGAACAGAGAGAAAAAAGANTGAAGAAAAAT
GAACAGAGCCTCAGAGACCTGTGGGACANCAT
>rnd-3_family-1568#LTR/ERVL-MaLR ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
GGGTTAATGGATTAATGGGTTATCATGGGAGTGGGACTGGTGGCTTTATA
AGAGAGGAAGAGAGACCTGAGCTAGCACGCTCAGCCCCCTCGCCATGTGA
TGCCCTGCGCCACCTCGGGACTCTGCAGAG
>rnd-3_family-923#LINE/L2 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TCATCTATACTCATGTCTCCACTTCGCCTCCTCCAATCTCTCTNGAACCC
ATTCCAATCAGGCTTCCGTCCCCATCACTCCACCGAAACTGCTCTTGTCA
AGGTCACCAATGACCTCCATGTTGCCAAATCCANTGGTCAATTCTCAGTC
CTCATTNTCTANTCAATCTACCTATCAGCAGCATTTGACACAGTTGATCA
CTCCTCTTCTTGAAATNCTTTCTTCGCTTGGCTTCCGAGACTCGACTCTT
TCCGGTTCTCCTACCTCCTGTCACTTCTTAGTCTTTTCTTTTACTGGTTC
CTCCTCATCTTCCCGACCTCTGAATGTTGNAGTGCCCCAGGGCTCAGTCC
TCAGGCCCATCGTTCTCTCTATACTTTCTCAGTGATCTCATCNAGTNCCA
TGGTTTTAAATACCATCTNTACGCCGATGACTCTCAAATATNTATCTCTA
ACCTAGGTCTCTCCTCTGAACTCCAGACTGTCTACTCGTTACGTTTCTAC
TTGGATGTCTANTAGNTATCTCAACACTGTAAAAAACTGAATTCTTAGTC
TCCCCTATTTTAATACCACCCCTGAAACTGCTNTTCTCGTAGTCTTCCGA
TGTCAGTAAATGGCAATCCANTCACTTCGTTGCTCAGGCC
>rnd-3_family-17#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
CTGTGAAAGGAAAATAAATCTCGGGACCCCAAACTCACTAAGCCAAAGGG
AAAAGTCAAGCTGGGAACTGNGTCAGGCAAACCTGCCTCCCATTTTGTTC
CTAAAATAAGATGGCTACAAAGATGAAAAGCTACATACCTCCCTCACANT
TTGCCCACAAGGAAATTCCTTGTGGGCCCCAAGATCTTTACCCTAAAACG
TTCTACTAGTTGAATTTCACCNTGGCAATGTAAATTGATAGCTTATCTTC
ACAGGTGCGAGGACACAGGACAGAACTCAGTCATCCCTCTGCTCACCTGA
GACAAATGCATATCTGATTGCTTCCTCTGCCCTATTGTCTATGTATCTTA
TGTAAAATGCAGATTCACTGAGCCAGACAAAGGCATAAGTGACTATTTTC
CCCCGTCCCTCCCTCACGTGAAAATTGTGTACTTCTCAATATCCCGCCCT
TTCCCCTTTAAATTTGGAGCCCTCAAAATCATCTTCGG
>rnd-3_family-818#DNA/TcMar-Mariner ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
GAAGGTCTTCAAAAAGTTCATGGAAAATGCGTATTATGAAAAANTATGCA
TGGATTTCAANTTTTTTGCACCAAAATAAACTCGTACTAACTTGTTATAA
CATGTCTGAACAGGATCTAGTTTGAGGCACTAAGAAGGATAAGACGTCAG
TTTGAAAAGAGTCCCTATCAGAGCAACATGAATTCTGCTAAAATTGAAGC
AAGAACAAACATCAAATTTATGGTGAAGCTTGGGTGGAAGAATGGTGAAA
TCACTGGTGCTTTACGAAAGTTTATGGGGACAATGCCCCAANGAAATCAG
CAGTTTACAAATGGATAACTCATTTTAAGAAGGGACGAGANGATGTTGAA
GATGAAGCCCGCAGCGGCAGACAATCCACATCAATTTGCGAGGAAAAAAA
TTCATCTTGTTCGTGCCCTAATTGAAGAGGACCGACGATTAAAGCAGAAA
CAATAGCCAACACCACAGACATCTCAATTGGTTCAGCTTACACAATTCTG
ACTGAAAAATTAAAGTTGAGCAAACTTTCCACTTGATGGGTGCCAAAACC
GTTGCGCCCAGATCAGCTGCAGACAAGAGCAGAGCTTTCAATGGAAATTT
TAAACAAGTGGGATCAAGATCCTGAAAGCATTTCTTCGAAGAATTGTAAC
AGGAGATGAAACATGGCTTTACCAGTACGATCCTGAAGACAAAGCACAGT
CAAAGCAATGGCTACCAAGAGGTGGNAGTGGTCCAGTCAAAGCAAAAGCG
AACCGGTCAANAGCAAAGGTCATGGCAACGGTTTTTTGGGATGCTCAAGG
CATTTTNCTTGTCGACTTTCTGGAGGGCCGAANGACAATAACATCTGCTT
ATTATGAGAATGTTTTGAGAAAGTTAGCCAAAGCTTTAGCAGAAAAATGC
CCGGGAAAGCTTCACCAGAGAGTCCTTCTCCACCGCGACAACGCTCCTGC
TCATTCCTCTCATCAAACAAGGGCAATTTTGTGAGAGTTTCGATGGGAAA
TCATTANGCATCCACCTTACAGTCCTGATTTGGCTCCTTCTGACTTCTTT
TCGTTTCCTAATCTTAANAAATATNTAAAGGGCACCCATTTTTCTTCAGT
TAATAATGTAAAAAAGACTGCATTGACATGGTTAAATTCCCAGGACCCTC
AGTTCTTTAGGGATGGACTAAATGGCTGGTATCATCGCTTACAAAANTGT
CTTGAACTTGATGGAGCTTATGTTGAGAAATAAAGTTTATATTTTTNATT
TTTATCTTTTAATTTCANTTTTTCCACGAACNTTTTGAAGTCCTCTCGTA
TATCTAAATNTGTTCCTTCGTTTGATACTCTGGA
>rnd-3_family-831#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AACCAGATNTTAANAGTCATTTAAAAAGAGTAACNTTTNGGAGGCGGAGC
AAGATGGCNGAATAGAAGCCTCCACCGATCGTCCCCTCTGCAGGGACACC
AAATTTAACAACTATCTACACACAAAAAAGCACCTTCATAAGAACCAAAA
ATCAGGTGAGCAATCACAGTACCTGGTTTTAACTTCATATCACTGAAAGA
GGCACTGAAGAGGTAGGAAAGACAGTCTTGAATCGCCGACGCCACCCCTC
CCCCATCCCCCTGGCAGCGCGCCTGGGTANAGAGAGAATCTGTGCGCCTG
GGGGAGGGAGAGCGCAGCGATTGTGGGGCATTGAACTCAGTGCTGTCCTG
TCACAGCAGAAAGCAAAACCGGGCCGAACTCAGCTGACGCCCACCATGGA
GGGAGCATTTAAACCAGCCCTAGCCAGAGGGGAATCACCGATCCCAGCGG
TCGAACTTGAGTTCCCGCAAGCCTCGCCACCATGGNCTAAAGTGCTCTGN
GNCCCCAAATAAACTTGAAAGGCAGTCTAGGCCACAAGAACTGCAATTCC
TAGGCAAGTCCTAGTGCTGAACTGGGCCCAGAGCCAGTGGACTGCGGGGG
GCACGTGACCTACTGAGACACCAGCCGGGGCGGCCAAGGGAGTGCCGGCA
TCACCCCTCCCCTAACCCCAGGCNGCACAGCTCGCAGCTCCGAAAGAGAC
CCCTTCCTTCCGCTTGAGGAGAGGAGAGGGAAGAGTGGGGAGGACTTTGT
CTTGCATCTTGGATACCAGCTCAGCCACAGCAGGATAGGGCACCGGTCAG
AGTCGTGAGGCCCCTNTTCCAGGCCCTAGCTCCCAGACGACATTTCTAGA
CACAC
>rnd-3_family-703#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
CAAGGTCCTTTGAACTGACTGCACCATGGACCACACCATGTCAAGCCATG
GTGACCCCCGTGACCCGCACGTACACCTCCGGATGGCCTCCCGGAGCCAG
AAAGTCTGAAGTAACTGGAAGACCGCGAAAAAGNGGAAGAATGATCAACC
CCTGCGGTGCCTAATTAACTNCTTGAGACATTCTACCATTGTTCCTGCCT
CAACTGATAAGCCAACCTTGTGACACTGGACCTTGTGGCCTGATTAACCG
ACCTTGCGACATTCTACCATTGTTCCTGCCTCAACTGATAAGTCAACCTT
GTGACGTTGGACCCTGTGCCTGAT
>rnd-3_family-139#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GACTACTCCCCAGGTATGGTGTGCATTATTCACTAAGGCNCTGAATCGGT
GGTCGTATGAAATAGACNCCCGAATATCCCCNAGGTGCGCATTATTCAGA
GAGGCTCTNAATGAGTGGTTATATNAATTAGNCTCCTGACTATTCCGCAG
GAGTGCATTATTCAATGAAGCTCTGAGTGAAGGCCACATGAAATTGACTC
CTAATTCTTCCNCAGTCGTGTATNATTCACCGAGCCTCTTAGTGTGTGCT
TAATTGAAATAGACTCCTGACTATTCCCCAGGTATGCATTATTCACTGAG
GTTCTGTATGAGTNGCCATATGAAATAGACTCCTGACTATTNCCCAGGTG
TGCATTATTCAGGGAGGCTCTTAATGNGTGGCNATATGAAATAGNNTCCT
GACTACTCCACAGGCGTGTATTATTCACTGAGGCTCTGAANGAGTGGCCA
TATGAAATAGACTCCTGACTATTCCCCAGGTGTGCATTATTCACTGAGGC
TCTGAATGAGTGGCCATATGAAATAGACTCCTGACTATTCCCCAGGTGTG
TATTATTCACTGAGNCTCTGAATGAGTGGCCATATGAAAGAGACTCCTGA
CTATTCCCNAGGTGTGCATTATTCACTGAGGCTCTGAATGAGTGGCCATA
TGAAATAGACTCCTCANCACTCCACAGGTGTGCATTATTCACTGAGGCTC
TGAATGAGTGNCCATATGAAATAGACTCCTGATTNTTTCCCAGGTGTGCA
TTATTCANTGAGGCTCTGAATGNGTGGCCATATGGAATAGACTCCTCACT
ATTCCCTAGGCGTNTGTTATTCACAGAGTCTCTGAATGCANTGGCATTCC
AAATAGACTCTTGAGNATTCTCCAGGTATGCGCTATTCCGTGAGGCTCTG
AATGAGTGGTCACGCGAAATAGACTCCTCACTNTTCCCCACGTGTGTATC
TTTCGNTGAGGCGCTGAATGNGTGGCCANATGAAATAGACTCCCGACTAC
TCTACAGGCGTTCNTTATTCAGTGAAGCTCTGAATGAGAGGCCATATGTA
ATAGNNTCCTGAGTATTCCCCAGGTATGCATTATTCNCTGAGGCTCTGAA
NGTTTGGCCATATGAAATAGCCTCCTGACTAGTCCACAGGTGTGTATTAT
TTAATGAGGCTTTGAGTTAGTGACCATATGAAATAGACTCCTGACTATTC
CCCAGGTGTGTATTATTGACTGAGNTCTGATTAAGTGGGCGTATGGAATA
GACTCCTACTATTCCAAAGTTGTGCATTACTCACTCAGGCTTTGATTTTG
TGGCCACATGAAATAGACTAGTGTCTATTCCACAGGTGTGCATTATTCAC
TGAGGCTGTAAATGAGTGGCTATATAGAGTAGACTCCTAACTCTTCCCCA
GGTGTGTATTACTCGGTGAGGCTCTGCATGAGTGGTCATATGAAATAGGA
TGCTGACTATTCCCCATGTTTACATTGTTCAGTGAATCTCTGAATGAGTG
GCTATATAAAATAGACTGCTGAGTACTGTACATTTGTGCGTTATTCACTG
AGGCTATGAGCGAGTGGCCATATGAAATGGANTCCTGNCTATTNCACAGG
TGTGTATNATTCACTGAGGCTCTGAATGGGTGGCTGTATGANATACACTC
CCGGNTACTCCACAGGTGTGC
>rnd-3_family-594#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GTAACTGATTTNAAAAGCAATTGCATAAAACAATATGTATATAATCGTAT
TGTTGGGCCTATAACATACAGANATGTAATATATTTGACAATAATAGCAC
AAAGGAAGTTGGTGGGAACAAACTGTATTGGAGTAAGGAAATGACACAAG
ATGGTAACTCGAATCCACAGGAANAAATGAAGAGCAANCAGAAATGGTAA
ATANNAGAAGGTNAATATAACAAACTCTATAAATATATACTTTTCCTTTC
TTCTCTTAGCTTCTTTAATAAGACAACAAATCATATAATTATAACAATGT
ATTGTGTGAATTATAATATATAGATATATTATGTGATATACATACAAATA
TTATAACAACACAGCACAAAAAAGGGGAAGAGGAAATGGAGCTATATAGG
AGNAANGTTTTTGTATNCTATTGNAATTAAGTTAGTATAAATAAGATCTN
ATAAATTAAGATGTNNATGGTAATCCCTAGAGCAANCACTAAGAAAATAA
CTAAAAAAATATAGTGAAAAAATCAACAAAGGAATTAAAATGNTACGCTA
GAAAATATTCACTTAAT
>rnd-3_family-43#LINE/L2 ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
TGGCGGCTCCATTCNTCTNGTTGCTCAGGCCAAAACCTTGGNAGTCATCC
TCNACTCCTCTTTTTCTCTCACACCTCACATCCAATCCATCAGCAAATCC
TGTCGGCTCTACCTTCANAATATATCCAGAATCCAACCACTTCTCATCGC
CTCCGCTGCCACCATTCTGAGGCCGAGCCATCGNCTCTCCCTGGATTACG
GCGGCAGTCTCATCNCTGGTCTCTCCGCTTCTTGATTCCCTTATATCTCA
ACACAGCAGCCAGAGTGATCCTTTAAAACGCAAGTCANATCATGTCATTC
CTCCGCTCAAAGCCTGCCAGTGGCTCCCCGTCTCNCTCAGAGTAAAGACC
GAACACCTNCATGGGCCTGCAAGACCCTGCAAGCTCTGGCCCCTCCGTTN
CCTCATCTCATCCCTTATCTNATCCTTCCGCCCTCACTCATCTTTNCTCC
ATCCCTCAGCCTTACTAGGCTCTCTGCCAGGCCCTATCTCAGATCTCTGC
ACTTGTGGCTCCCTCT
>rnd-3_family-209#LINE/L2 ( Recon Family Size = 23, Final Multiple Alignment Size = 15 )
ATTGGGAGTCATCTTTGAGCCTTTCTTTCCCTCATTGCTCTAACCACGTG
TCCATCCTTCATCCTTCAGCAGCACCTGAATCCGTCTACTTCTTCCCGTC
TCCACTGCTATCACCCTNATCCAGGCCACCGTCATCTCNCANTTGGANNA
CTGCAGTAGCCTCCTAACTGGTCTTCCTGCTTCCACTCTTAGCCTCCAAT
CCATTCTCACCCCAGANAANANCCAGAGTGATCTTTTAAAAATCGGTTNA
TCATGTCATTCTCCTGCTTGAAACCCTNCTTGAGTGGCTTCCCGTTACAC
TTAGAATAAGATT
>rnd-4_family-338#LTR/ERVL-MaLR ( Recon Family Size = 182, Final Multiple Alignment Size = 149 )
GATTTAGCTGGGCACATGGCTGCNCCCAGATGAAAAAAGACTACATTTCC
CAGCCTCCCTTGCAGCTAGGTGACTAAGTTCTGGCCAATGAGATGTAAGC
AGAAGTGTCGTGTGGGACTTCCGGGAAGTTCTCCCTGAAAAGGAAGAGCT
TGCCCTTCTTCTCCTTCCTCTTTCCTGCTGCCTGGAACGCGGACGTGATG
GCTGGAGCTCNAGCAGCCATCTTGGACCATGAGGGTCACTCCTTGGTGAT
GGCGGAGCAGCAAGATAGAAGGAGCCCGGGTCCCTGAAGGNCATGCGGCC
GCCGTACCAGCCCTGGATTCTACCTCCGGACTTCTTTTACGTGAGAAAAA
TAAACCTTTCTTTGTTTAAGCCACTGTTATTTNTGGGTTTCTGTTACTTG
CAGCCGAACCTAATCCTAACTGATAAGGCAAGCTCTNATTTCTAAGCAGC
GGAAGGA
>rnd-4_family-62#LTR/ERVL-MaLR ( Recon Family Size = 159, Final Multiple Alignment Size = 140 )
GACATGCAGGAATGGCTGTGGTAGTAGACTGTTNCAGTTCNCAAAATTAT
TTGTTTCCCTTTCCCGTGGNAGGATTGTACTTTCCCTATTGCCCCTNNTG
AAGTCAGGAGTGGCCATGTGACTTGCTTTGGCCAATGAAATGTGAGCGGA
AGTGACGTGTGTCACTTCCGGGCGGAAGCTTTAAGAGCCANTGCATGGCT
CTCTNTTTCCTCTGCCATGAGAGCAACGCAGTTCCAGATGGNGGCTGCTC
CGTCAGCCTGGGTCCCGGAGTGAAGACGACTTGAGCAGAGCCAGAGCCCA
GCTGCAACAGCCGTGATGGACATGTGATGCAAATAAATAAACCTTTGTTG
TTTTAAGCCACTGAGATTTTGGGGTTGTTTGTTACCGCAGCATAACCTAG
CCTATCCTGACTGATACAATGAACAGGTGTCGTANTANNTTGTNATTTTA
TATTTTGGAAATAATGTATCAGA
>rnd-4_family-369#LTR/ERVK ( Recon Family Size = 114, Final Multiple Alignment Size = 106 )
TGAGATTCACTCGGGGTGGCTGGCAAAATATTAAGGGAAAGAAAATATTA
GGGAAAGTTATAGANTATAGTCTCAAACCTTTTGGAAGGCCGAAAGGTTT
TATTGGAACGGGCTGAAGGCAGCCAGTTCATAGCATTAGCATAGGGAAAA
AGATAGGGACAATAAAGGCTTNCCCAGTTAAGTCTGTTTACCCCACATCC
CTTTGTCTACTACTCTGTTTTTACTCATGTAAACTTTGTGCCGGATGGCC
CTCTCAGGGGGAGGTCAAAGGGGAATTACCCGCTAATGGTGTTTGCTCTG
GGCCCCGGAACCTAAAGCCTTTNATCATTCGTAAAACCACTCTTTAACCA
TGTTAATTACCCACAAGCGGTGTTGACTCAGAGCCTCTGTCATTAAATCT
GTACTGAATAAATGCGAGGATGNACAGGGAGTCTTGGTCGGTTGGCTGCA
NTCGCCCTCTGAAAGCAGCCGACGGCCATCCCCAGCCCACCTGAATCTGT
AATGTGTGTGTGAGTGCATTTATTCATCCGTCGCTGAGTCAGGGTCTGCA
GGACAGACCTCCGCAGGTGGTGACCGACGTCTCAGGTGGTGACCCCGACG
TGATCGA
>rnd-4_family-39#LINE/L1 ( Recon Family Size = 102, Final Multiple Alignment Size = 99 )
TTTTCATTGATATAATAGTCATTTATTAATAAATCACAGGTGGACACTCC
TTAGAGAAATGGCTGATTCCAGGTCTGGGGCAGGAAATGTACAAGATGAG
CTTGGAACATCTTGTCACGCCAGAAAGCAAGGAAGCTATCAAAGACTACT
AGGGTCGTGTCAAAAGGACTCAGGAGCCGACTTGAAGAGGCTCCCACTGG
CCAAATTTGAGCATCAAAGGGATAATAACTGCAATGGATTGAAACACATC
AAATATGTTTAATCTACGAGTCGTAAGATTACTTATGGAGGATGCTAGGG
AACCAACTCATTATTCTGAAAACTGGTAAATAAGAGAATCAAGCATTTAT
CCTGCCTTTCCTATACGAACTGTATCTCAGGGTAACCAAATAGTAGATAA
GGAGAAGTTTCTCTTTATAGAAGTATTCCAGCTAATAAATGAAGAAGGAA
TGATAGAATTATCANNATCACCATTTTGCAACCCCTAATGAATAATGGAT
CTAGGCANTGATCATCAATGGCTGCTAACATCACAAAAAGGCAGTTGTCC
TGATGGAAGNACACANCACCACCTATGAAGTATTCTTGCCAAAAAAAAGA
TCGAACCTGAATCTGATCAAGCCTCTAGATCTAACTACCAATTTACAGGA
AATACAGGGGACAGAGGAACATGTTAAATGACACCAACGGCAAAATCCAG
ANTATTGGAAAACTACCAGGACAAACGACCAGTTTGGTTTCTTCAACAAA
TAAATTGCAAAAAAAAAAGATGAGGGAGAAACCTANAGAAAAAGAGACTA
AGAGACATATCAACCAATTGCAATGTATGGACCTTATTTGGATCCTGATT
CAAACAAATAAACTAAGGTAAAATTTGAACACTGGATATTTGATGTTATG
GAANTATTGTTAATTNTTTTAGGTGTGATAATGGTATTGTGGTTATGTTT
AAAAAGAGTCCTTATCTTTTAGATACATACTGAAATGTTATAGAGAAAGT
GATACATATGAAAAG
>rnd-4_family-477#LTR/ERVL ( Recon Family Size = 117, Final Multiple Alignment Size = 96 )
AGAAAAGAGTTAACATAGCAGGCCTGAGACTGCTATCCTTAGAAAGGCCT
GCTTGCAAGGTTGGCCCTTGGCTGGCGTCTGGGAACTTGGATTTCGGGAA
GGGTTCCCACCATTCCCTAACTGATAAGAGTGGCTCACTGTGCCTAAACT
GTTTGTACAAACAATGTGGTTTATGCTGAACACCTGCTTTCCTTCTGGGA
GTCTGGAATTTTGGTACGTGCTAGGCAGAGGGCAGCATGCCTACGTGACC
AGCCCCCAATAAAAACCCTGGGCACCGAGNCTCNAATGAGCTTCCCTGGT
NGGCAACACTTCACACGTGTTGTCACAACTCGTTGCTGGGGGAATTAAGC
GCGTCCTGTGTGACTCCACTGGGAGAGGACNCCTGGAAGCTTGCGCCTGG
TTTCTCCCGGACTTCGCCCCATGCGCCTTTTCCCTTTGCTGATTTTGCTT
TGTATCCTTTCGCTGTAATAAACCGTAGCCGTGAGTATAACTATATGCTG
AGTCCTGTGAGTCCTCCTAGCGAATCACCGAACCTGAGGGTGGTCTTGGG
GACCCCCCA
>rnd-4_family-488#LINE/L1 ( Recon Family Size = 95, Final Multiple Alignment Size = 85 )
ATAAAGAAACTTCAGGCGAGAAGGAAAATGATACCAGACGGAAACTCGGA
TCTATACAAAGGAATGAAGAGCACCGGAAATGGTAAATACGTGGGTAAAT
ATAAAAGACATTTTGTTTTTAAAATAAGAACTAAAGCAAAAATAATAACC
AATGTATTGTGGGGTTTATAACACATGTAGAAGTAAAATATATGACAACA
ATAAGCACAGGATNGGAGAAGAAATGGAAGTATACTGTTGTAAGGTTCTT
ATACTATACGTGAAGTGGTATAATATTACTTGAAGGTAGACTGTGATAAG
TTAAAGATGTATACTGTAAACCCTAGAGCAACCACTAAAAAAGAGGTATA
GCTAATAAGCCAAATAGNAGANGATAAAATGGAATNNTAAAAAATACTTA
ATATTATCCAAAAGAAGGCAGAAAAAGAGAAAAACAAAGAACAGATGGGA
CAAATAGAAAACAAATAGCAAGATGGTAGATTTAAACCCAACCATATCGA
TAATCACATTAA
>rnd-4_family-701#LTR/ERV1 ( Recon Family Size = 121, Final Multiple Alignment Size = 78 )
AAAGAATATGCCACTCCGGCATAAGGATTATTTTGAGCTAAAGGCAATTG
AGAAGCAGCAGATGCAGGAAAAGCTCTCTGCCCTCCCCCTATTTGCCTAA
AAGCAGGACATAATTTGTAAAGGTATCCTCCTTCCCTCCCTACCAGGAAG
GACAAAGGTTANTCACCGGAGACGACTTACCTCACAGCCCGGAGATCGGC
ACCAGAGGAATCTGCATAACAAGCCTTACTAACTAGCCTTTATCTNCCAT
TTAGTTTCCCCCATATATTTGNCCTTCCCACAATTTGCTGCCCCTAAAGC
TTCCTTTTCCTTTGTCTTGTCACTTCTCTAAAAATTTATTGTTCTTTGTT
AAGATGCTATATAAGCCNNAGTTCTAAGCCACCTCTTTGAGAACCACTCA
TTCCCTGTCTCCCATGTATGTATGAGATATACATGTTAATAACTTGTTTT
TCTCTTGTTAATCTGTCTTTTTATAGCAGCCTCAGCTGCAAGGAACCTAA
GAAGGTAAT
>rnd-4_family-326#LINE/L1 ( Recon Family Size = 101, Final Multiple Alignment Size = 70 )
TAAGAAATAAAGATCTCAGTAAAGGTAAATACATGGGCAANTATAAAAGC
TAGTATTATTGTAACNNTGGTTTGTAACTCCACTTTTTGTNTTCTACATG
ATTTAAGAGACAAATGNACTTTCCATTAAAAAAATATATTAGTCTAAAAG
CCAGTATTATTGTAACTTTGGTTTGTAACTCCACNTTTTGTTTTCTACAT
GATTTAAAAGACAAATGCATTTAAAATATTAGTTTATGTTTTGGGGCACA
NTGTATAAAGATGTAATTTGTGTGACATCAATAACTGAAAGGAGTGGGGA
CAGAGCTGTAAAGGAGCAAGAGTTTTTGTATGCGATTGAAGTTAAGTTGN
TATCAACTTAAAATAGANTGTTATAACTTTAGGATGTTANATGTAATCCC
CATGGTAACCACAAAGAAAATANCTATAGAATATACACAAAAGGAAATGA
GAAAGGAATCAAAACATGTCACTANAAAAAATCAACTAAACACAAAAGAA
GACAGTAATGGAGGAAATGAGGGACAA
>rnd-4_family-79#DNA/hAT-Charlie ( Recon Family Size = 79, Final Multiple Alignment Size = 68 )
AAAGGCCAGAGACTGCAACTGGCGGCCCATAGGCCAAATCCGGGCCCCAC
AGATGTGTTTTGTTTGGCCCAACANTGTTTTAAAAATCGGGAGATTTCAC
ATAAAAATCCGGATTTCCGGCTTCTCTTGAAAAACCAGATCTGGCAACAC
TGGGCCCGCATTTCCGCATGGCAACAATTGGCTAGAGCCGGGCTGAGNAG
CGGCTGCCCCCTAGACGAGGCTGTGCACCCTGCTTCCCAGCCCACGTCCC
TCACCGATGCCNCCTGCCTGGCCCCTGNAGGCACNTGANTTCGCTGTCAG
GCCCAGNANCTNCCTGCCCAGGA
>rnd-4_family-1081#DNA/TcMar-Tigger ( Recon Family Size = 73, Final Multiple Alignment Size = 67 )
TACAGGCATACCTCGTTTTATTGTGCTTCGCTTTATTGCGCTTCGCAGAT

>rnd-4_family-1392#LTR/ERVL ( Recon Family Size = 73, Final Multiple Alignment Size = 65 )
AGGGGACCAAAACGTCACTGTGGTCCNCCAGTCAGAGTAGGGGCTTATGG
AGGTCAGGTGATNAATGGAGTTTTAGCTCAGGTCCGNCTCACAGTGGGTC
CAGTGGGTCCCCGGACCCATCCTGTGGTCATTTCCCCAGTTCCGGAATGC
ATAATTGGC
>rnd-4_family-401#LINE/L1 ( Recon Family Size = 74, Final Multiple Alignment Size = 65 )
CTGTCAACCTAGAATCCTACATCCGGCGAAAATATCCTTCAGGAATGAAG
ATACACTCAGACGAAGGAAAACTAAGAGAATTTGTCACTAGTAGACCTAC
CTTAAATGGCTAAAGAAGTTCTCTAAACAGAAAGAAAATGATAAAAGAAG
GAACCTTGGAAACATCAGGAAGGAAGAAAGAAAATANNGAAAGAGCAAAA
ATATATGGGTAAATACAATAGACTTTCTTCTCCTGAGTTTTCTAAATTAT
GTTTGATGGTTGAAGCAAAAATTATAACACCGTCTGATGTGGTTCTNAAT
GTATGTAGAGGAAATATTTAAGACAATTGATATAAANATGGGGAGGGTAA
AGGGACANTAAAGGGAGGTAAGGTTTCTATACTTCACTCGAANTGGTAAA
ATGTTGACACCAGTAGACTGTGATAAGTTACGTATATATAATGTAATACC
TAGAGCAACCACTAAACAGAGATACACTCAAAAACACTATAGATAAATCA
AAATGGAATTCTAAAAAATGTTCAAGTAACCCACAGGAAGGCAGGAAAAA
GAAAA
>rnd-4_family-447#LINE/L1 ( Recon Family Size = 76, Final Multiple Alignment Size = 62 )
CAGATGTGTGGTCCATAGTTACAAGTCAGTGGTTCTCAGAAAATGACTAT
TAAAACACAATTAGTCAAGACTTCTGCTTCCGGGAAGATGGAGTAGACGT
ACTTTTCCCTATTCCTCCCGCTAAGTACAACTAAAAACCCTGGACATTAT
ATATAAAACAAACACTAAGAAGACTCTGAAAGGTGGAGAGAAGAAGGCAG
ACCGGCTAGGGACCTCGGGACCCGAGGAACGACACGGCGGTGAGTTCCTG
GGTTTTCTTTTTGCCTCATATATCCCAGACTTGGAGCTGAAGAAGCCGGC
AACCCGGAAACGCCAATGAGCTGCACAGACAAAAAACGCCCAACAAACCT
CTGCTCTCTAGCCAAAGGACCAGGAAAGGGGCAGCCTAGCAAGACAGAAA
ACTTTTAGACAATAACCGCTCTACTCCAGCCAAACACCACAGCAANNNAA
AACTGTGGCCTAGACTTCCACCCNCGCCAGGCTGCAATGGAGGTGCCCCC
ACCTTCCTCCTGCTCCCAGGGTGGCGTCAGAGAAGGCCGAGTAGGGAGCC
GGGACTTTCATCCCCGCCGGGCGGTAATGAGGTCCCCACCCCCTGTGGTG
TCAGTGGAGACCACGTGGGGAGCCCGGACTTCCACCCCCACCCAGTAAGA
CGAGGCCNCCCTACCCTTCCCTGCTGGAGGGTGTCAGAGGAGGCCTAGTG
GAGAGTCAGGACTTTCGCCACCGCCCAGCGGTAACGAGGCCACCCCCCAT
GGTGTCAGTGGAGGCCACGTGGGAAGCAGTAACGAGGAAGGCACTCCTAC
CCCNCTCCCAGAGCCAGGGCGGTGTCAGTGGAGGCCTAGTGGGAACTCCC
ACCTCACCCGGCAGTAACGAGGAGCCCCTCTCCCTCGAGCGTGTCAACGG
AGGCCGAGTGGGGAACCTGGACTTCTACCCCCACCTGGCAGTAACGAGGC
GGCAATCTCCCCTTCCCCTTGCCGGAGCGGTGTCAGAAGAAGCCAGCTAA
AACAGAAGGTTTAAATAAGATCCAGAGTCTCACAACATAATAC
>rnd-4_family-637#LINE/L1 ( Recon Family Size = 66, Final Multiple Alignment Size = 58 )
ATGAGTGAAATTGAGGCTCTACGTACTGATATGGAAAGATCTCCAAGATA
TATTGTTAAGTGAAAAAAGCAAGGTGCAGAACAGCGTGGTGTATAGTATG
CTACCATTTGTGTAAAGAGATAAGGGAAAAATACATATGTATTTGCTTGT
ATATGCATAAAATATCTCTGGAAGGATACACAAGAAACTGATAACAGTGG
TTGCCTCTGGGGAGGGGAACTGAATGGGTAAGGGACAGAAGTGAGGGACT
TTTCACTGTATACCTTTTTGTACCTTTTGAATTTTGAACCATGTGAATGT
ATTACCTATTCAAAAAATTAAAAACCTTTTAAACTTATANACTAAAGTTA
AAATAAATTATATTTCATGACATT
>rnd-4_family-212#DNA/hAT-Charlie ( Recon Family Size = 66, Final Multiple Alignment Size = 58 )
TTTTCAAACTGCGGGTCGCGACCCATTAGTGGGTCGTGAAATCAATTTAG
TGGGTCGCGACCAGCATTTTAAAAATGGAATAGANAGAATAGAAAATATC
AGAGTGCATCGCACGTAGTAAGGGTAAGTATTGTTTCGTGAAACTTTTGT
TTCNGTTACGTGTGTGTATGTGTGTACTGGGTCGCGATGTAAAATGTATT
TCTTACTGTGGGTCGCGGTCAAAAAGTTTG
>rnd-4_family-259#DNA/hAT-Charlie ( Recon Family Size = 58, Final Multiple Alignment Size = 57 )
CCTTGCTACTCAAAGTGTGGTCCGCGGACCAGCAGCATCGGCATCACCTG
GGAGCTTGTTAGAAATGCAGAATCAGGCCCACCCCAGACCACTGAATCAG
AATCTGCATTTTAACAAGATCCCCAGGTGATTCGTATGCACATTAAAGTT
TGAGAAGCA
>rnd-4_family-829#LTR/ERV1 ( Recon Family Size = 60, Final Multiple Alignment Size = 57 )
GTAAACGGAACGAAAAGATTACTGGGATGTCCTTTCAATGGAAAACTANG
CATTGTCTAGTGTTTCCTGGTTATCTGATTCCTTTCATTGTCTTTGAGCT
ATTTTACAACTCTGTAAGTTGTAGANAACTGATAGCAATGCAAATGATTC
TTGTCCGTAGCAATTTGTCCGGTGGGATGCAATTGATTATTCCCCTGTGG
ANAGANCCGTTTTGCATCCATTTGTAAATTCATTTCAGCATTTATATATG
TGTTCTTTGAATTCTCCTTTGAACCGGTTGTAACATCTNNCCGGTTCCCT
CATTAATTAATGAGTTAAATAAAATCTTTGACACGTGTTCATTTTATATC
TGTATGAGAGTCATGATTTTACCTTTTTTAAAAAAAATTATCCTTCA
>rnd-4_family-268#LTR/ERVL ( Recon Family Size = 58, Final Multiple Alignment Size = 55 )
TATTTTCTATGTATTTCTGATGCTTTGACATCTGGGGCCTTGCTGACCCT
GGAGGGACTGCCCCTCCCAGGGCTAGCCAATTCCTAGAGATAGCAAACGA
CTCGCCCGCGAGCGCGCCTTTCATATGCAAACCAACCAATCCAGAGCCCA
CACCCCNCAACCACCTCCTTTATCGTCGGGCTCTCACACGCAGCCACCAC
CCTGCCCTAATCACCCCAGGGCCAGGTACCAGACAACTAGGGACAGCCCC
TATGCCCCAGAGCCCGCCGAAATTATTCAAACTAGCCAATCCTAAGCCTG
CTTACCCTTGCCTCGCCCGTTCCTTCCCACGGAAACCACAATAAAGGCTC
TGCCCACGTTCCTTCCCCTCCTCCCCCTCTGCCTCCTGACCGACCCTGGT
GCTTCCCCGTGTGGCCCTGCGTGGCGTGGCGTGCCTCCTTCTCTNGGGAN
CTGTGAGTGTAAAAAACTNTCTTTCAATGGCAGTCGCTTCTNNGTCTGTT
GGCCTCACCATACCTGAATAAAACAAAACCTACATTTAAA
>rnd-4_family-1056#DNA/TcMar-Tigger ( Recon Family Size = 55, Final Multiple Alignment Size = 54 )
ATAAATATATTGGAAAATTTTTTGGAGATTTGCGACAATTTGAAAAAACT
CGCAGATGAACCGCGTAGCCTAGAAATATCGAAAAATTAAGAAAAAGTAG
GTATGTCATGAATGCATAAAATATATGTAGATACTAGTCTATTTATCATT
TACTACCATAAAATATACACAAATCTATTATAAAAAGTTAAAATTTATCA
AAACTTACGCACAAACACTACAGACCGTACGTGGCGCCATTCGCAGTCGA
GAGAAATGTAAACAAACGTAAAGATGCAGTATTAAATCATAACTGCATAA
AATTAACTGTAGTACATACTGTACTACTGTAATAATTTTGTAGCCACCTC
CTGTTGCTATTGCGGTGAGCTCAAGTGTTGCGAGTATCCGCTTAAAACGC
CGTGTGACGCTAATCATCTCCGCGTGAGCAGTTCGTCTCTCCAGTAAATT
GCGTATCGCAGTAAAAAGTGATCTCTCGCGGTTCTCGCGTATTTTTCATC
GTGTTTAGTGCAATACCGTAAACCTTGAATAACACCATGGGACCCATACG
AAGTGCCACTAGTGATGCTGGAAGTGCTCCCAAGAAGCAGAGAAAGTCAT
GACATTACAAGAAAAAGTTGAATTGCTTGATATGTACCGTAGATTGAGGT
CTGCAGCTGCGGTTGCCCGCCATTTCAAGATAAATGAATCCAGCGTAAGG
ACCATTGTAAAAAAAAAAAGAAAAGGAAATTCGTGAAGCCGTCGCTGCAG
CTACGCCAGCAGGCGCGAAAACCTTGCACTTTTTTTGCGAAATACCTTTT
TATCTCGTATTGAAAATGCAGCTTTTATGTGGGTGCAGGATTGCTATAAG
AAAGGCATACCTATAGACTCTAATATGATTCGAGAAAAAGCGAAGTCATT
ATATGACAACTTAAAGCAAAAGGAAGGTGAAGGATCTAAAGCTGGAGAAT
TTAATGCCAGCAAAGGATGGTTTGATAATTTTAGAAAGAGGTTTGGCTTT
AAAAATGTCAAGATAACAGGAGAAGCAGCTTCTGCCGACCAAGAGGCAGC
AGACAAGTTCCCAGATGCCATTAAGAAAATCATTGAGGAGAAAGGATATC
TGCCTGAACAGGTTTTTAATGTAGACGAAAGTGCCCTATTCTGGGAGAAA
AATGCCACAAAGGACATTTATTAGTAAGGAAGAGAAGTAAGCACCAGGAT
TTAAGGCAGGAAGGGATAGGCTAACTCTACTGTTTTGTGCAAATGCAGTC
AGGTTTATGATCAGGACTGCCCTTATCTATAAAGCTGCTAACCCCCGAGC
CTTGAAGGGAAAAGATAAACACCAGCTGCCAGTCTTTTGGTTGTACAACA
AGAAGGCCTGGACAACGAGAACCCTTTCTCTGGATTGGTTCCATCGATGC
TTTGTCCCTGAAGTCAGGAAGTACCTTGCCAGTAAGGGACCGCCCAGAAC
CCCATGAGTTCAACACCGAAGGCGTCGAAGTGGTCTACTTGCCCCCAAAC
ACAACGTCTCTAATTCAGCCTCTAGATCAGGGGGTCATAAGGACCTTTAA
GGCTCATTACACACGGTACTCTATGGAAAGGATTGTCAACGCTATGGAAG
AGAACCNCGATAGAGACAACATCATGAAAGTCTGGAAGGATTACACCGCT
GAAGATGCCATCGTTGTTATAGAAAAAGCCGTGAAAGCCATCAAGCCCGA
AACAATAAATTCCTGCTGGAGAAAACTNTGTCCAGATGTTGTGCATGACT
TCACAGGATTTACGACAGAGCCAATCAAGGAAATCATGAAAGAGATTGTG
GATATGGAAACAACAAAAAAAAGGCGGAGGGTGAAGGGTTTCAAGATACG
GATCTTGGAGAAATTCAAGAGCTAATAGACACCACACCAGAGGAATTAAC
AGAAGACGACTTGATGGAGGTGAGTGCTTCCGAACCAGTGCCAGACGATG
AGGAAGATGACACAGAAGAAGCAGTGCCAGAAAACAAACTGACATTAGAC
AATCTGGCAGAAGGGTTCCGATTATTCAAGACTGCTTTTGACTATCTTTT
ACGACATGGACCCTTCTATGATACGGGCACTGAAACTAAAGCAAATGGTG
AGAGAAGGATTGGTACCATATAGAAACATTTTTAGAGAAATGAAAAGCAA
AAAATCAGACAGAAATTACGATGTANTTCCGTAAAGTTACACCGAGTGTG
CCTGCCTCTCCTGCCTCCCCTTCCA
>rnd-4_family-485#LTR/ERV1 ( Recon Family Size = 60, Final Multiple Alignment Size = 53 )
GCAGCCGCTGCCANGACGCCAGCTGCAGCGGGGGAGGTGCGGCCGGGCCC
ACGGAGGGCGGGAACAGGCGGGAGCCCCGCCCCCTTCCGAGTTGGCGGGG
CGGGAGCCCCGCGCTCCCGGGCGCAGCTGCAGCCGCCCGGCCACGGCTGC
AGCCNCCCGGGCGCAGCTGCAGCCCGCCCAAGCCACGGCTGCGGACCCGG
GCATCCCTGCGCTCTCGGGGGCCCGGGAAGCCCCCCTCGCCCCCGCAGGC
TCGGAAGTGCCTGCTCCCGCTGCCTGGCCTCTCCCCGCTCCCGGCGCCCG
CTCCGATCTCGGAGCAAAGTTGNGGCCGAGCCCGGGCGCTGTCGCAACCC
GGCCGGGTGTGCGCACGCTCGGGGCGGCGCTGACACGCCAGCCCCCTGCC
GCCTCGGCCCCCTCCGGACTTTGGGCACCGAAAGAACATGGGAGGGAGGC
CAGGGGGGNGCTGAGGGCAGCTCGGCGCTGGCCTGCAGGCGCCCCTCGGC
ACGAACAGCCTGGGCGCCATGGACGCATGATGGCGGCAGGAGGCAGACAG
GCTCCTGGGCGGAAAGGGGCGGGTCCCCGGTGAAGCCCCACCTTCAAGCC
AGGGACGGCCTGAAGCCTGGGGGCCGGGCTGCCAGTCCCGCGGACCGGAG
TGGGAACTTATGGTGCTTTTTCCGGGCCCGCCCATGGCCGCCCATGGACC
AATCAGCACGCACTTCCTCCCCTCTGAAGCCCATAAAAACCCGGACTCAG
CCAGACTCAGAGNAGACGATCGGGACGACCAGCTGCGGAGAGGAGCTACC
CACTCCAGGGTCTCCTCTACTCTTCAGGACGACCTGCCTGCGGAAAGGAG
CTACCCACTNCGGGTCTCCTCTCCTACCCACTNCAGGTCTCCTCTCTGCT
GAGAGCTGAACACTCGTCGGGACGACCTGCCTGCGGAGAGGAGCTACCCA
CTGCGGGTCTCCTCTCTGCTGAGAGCTGGACACTCGNCGGGACGACCTGC
CTGCGGAAAGGAGCTACCCACTTCGGGTCTCCTGAGAGCTGTTCTGTCGC
TCAATAAAGCTCCAGTTGTCCGCGTACCTCATTCTTCCTGGACGCAGGAC
AAGAACTCGGGACCCGCCGAATGGCGGGACTGAAAGAGCTGTAACACAAA
CAGGGCTGAAACACGCCCCTTGCTCGCCACGTTGCGGGCGACGAGAAGGA
GAGAAGAGCTGCGGCCCTTCGGGGAGCCCAGACCTAGGGGCTCCCCGAGC
CAGGGCTGTGACACCCTCTTTGGGGCTCTGCGGTTCCTGGCGTCTCCAAG
CTTCCGGGCGCCACCGCGTTCCCCTGTCCAGAGGTGCCCGCAGCGGAAGC
CGCTTGCGGTACGCCTGGTCCAGCCGCAGCCTCGCACGGAGCCGGCGCCC
GTGCCGGCGCCTGGAGCTGCCCGCCCCGCCGCAGCAGCCGGCGTGCCTGG
CTGTGCGCAGTGGCTGGAT
>rnd-4_family-419#DNA/TcMar-Tigger ( Recon Family Size = 53, Final Multiple Alignment Size = 53 )
TTTTTCGGATTTTGGAATATTTGCATTATACTTACCGAGTTGAGCATCCC
NAATCCGAAAATCCGAAATC
>rnd-4_family-1067#LTR/ERV1 ( Recon Family Size = 53, Final Multiple Alignment Size = 52 )
TGAAACTTACTAGATCACATCTGGACAATGAGATNTNCATGGTTTCTTTA
ATAAACATAGAAATTGACCCTCCCGGTCTTAAAGCTTGAGAAACTTACAT
TTGTCTTATCTGAGTTCCTTCCTCAGGAAACCGACCNTCAGGCCTCCCAG
ANAGTATCAAGGAACTGAAACTCACCAGATCACCGCATCCGGACAATGAG
ACGCCAGACCCCTCATCCATCATGATTGCCTAACTGACCACCTGCTTCCT
GTTGACCAACTCC
>rnd-4_family-133#LTR/ERV1 ( Recon Family Size = 57, Final Multiple Alignment Size = 51 )
TTAAATAAAATTTATGGGAGGCCATTGTTTTGGACTGAGCTCCTGCACTA
GGCCCCAACAGACCAGACCAAACCAAAATGGAGTCACTCATGCTAAGTNC
CACGTNACCAAACTAAACTTGGAAACGGGAGTTTCCGAAAAACAGGAGAN
TNACAGCAACCAACCCAAANGGGCCCAGTCTACCTGAGCCGGCATGATAA
GGAAGTCCCCTCTGCTTTAACCCTTACAAGGAAAGTAACTTTGAAATGAC
CAATCCGCTTTTTGTTCCCCGTTTCTGCTTTCTTCAGCCCTTTTCTGCCT
ATAAAGCCAACCTCCTCTGCTCAGCTCATCGGAGCNCTCATTCTATTTTA
TAGAATGAGGTGCTGCCCGATTCATGAATCGCAAATAAAAGCCAATTAGA
TCTTTAAACTAAATTTGTTGTAATTTTGTCTT
>rnd-4_family-474#DNA/TcMar-Tigger ( Recon Family Size = 51, Final Multiple Alignment Size = 49 )
GTCCCTTATCCGCAATTCCGAAATCCAAAAAGCTCCGAAAACCAAAAGTT
TCTTTTAACTCATTTGGCGGCAAAACCTGACCTGAACTGACGTGATTAAA
GGCTATTTATAGTCTTTATTTATCCCACTTAGTGTGAATATTCATACGTT
TCGCTGCAGAAATATTAATGTGTTTGATCACAGAGCTTACTAAGGGGTGT
TATGTAATATCATATATGCACCGTATTACCTTTCTAAAATCCGAAAAATT
CTGAATTCCGAAACACATCTGGCCCCAAGGGTTTCGGATAAGGGCATGTA
C
>rnd-4_family-655#SINE/MIR ( Recon Family Size = 67, Final Multiple Alignment Size = 49 )
ATATAGCACAGTGGTTAAGAGCACGGGCTCTGGAGTCAGACTGCCTGGGT
TCAAATCCCGGCTCTGCTACTTACTAGCTGTACGGCGTAAGTGATCTAAT
CTGTCTCAAGCCAGTTTCTTCATCTNTAAAATGGAGAAGGTAATATCCAC
CTAATAGTAGNGTTATGAAGACTAAATGAGCTGAAA
>rnd-4_family-478#LINE/L1 ( Recon Family Size = 50, Final Multiple Alignment Size = 48 )
ATATGTAGGATGAACAAGTCTAGAGATCTAATGTACAACATGAGGACTAT
AGNTAATAAAATTGTATTGTATTCGGGATTTTTGCTAAATGAGTAGATTT
TAGCTGCTCTTGCCACAAAAATGGGTAACTATGTGAGATGATGGATATGT
TAATTTGCTTCACTATAGTAACCATTTTACTATNTATGTATATCTCATAA
CATCATGTTGTATACCTTAAATATACACAATAAAATTTATTTT
>rnd-4_family-343#LINE/L1 ( Recon Family Size = 57, Final Multiple Alignment Size = 48 )
AGGTCAGAAACTCGGATCTACATAAAAAGAAAAGAGCATTAGAGAAGGAA
TAAGTGAAGGTAAAATNAAANCTTTTATTTTTCTTATTCTTAATTGATCT
AACAGATAACAGTTTGTTCAAAATAATAATAGCAACAATGTATTCGATAT
ATTACTTATATGTGCTTATGNATAAGTAAAATGAATGACAGCAATGATAC
AAGGGACGGGAGGGAGGAATTAGGANTATTTTGTTATTATAAGGTACTCG
CACTACCCGTGAAGCGGTATAGTGTTATTTGAAAGTGGACTTGGATTAGT
TGTAAATGTATATTGCAAACTCTAGGGCAACCACTAAAAAAAGTATAACT
GATATGCTAAGAAAGGAGAGAAAATGGAATCATAAAATGCTCAATTAAAA
CCACAAAAGGCAGAAAAGGGTGGAAGACAAAAATAGGAACAAAGAACAAG
NGCAACAAATAGAAAACAGTAACAAATATGGTAGATATTAATCCAACTAT
AT
>rnd-4_family-714#LINE/L1 ( Recon Family Size = 56, Final Multiple Alignment Size = 46 )
AAATCAATAGAAAATATAGAANNNAAAAAACAATAGAGAAAATCAATGAA
ACCAAAAGTTGGTTCTTTGAAAAGATNAATAAAATTGATAAACCTCTAGC
NAGACTGACCAGGAAGAAAAAAGAGAGAAGACACAAATTACCAATATCAG
GAANTAAGAAAAGGGGACATCACTACAGATCCTACAGATATTAAAAAGTT
AAAAAGGAATATTATGAACAACTTTATGCCAATAAATTTGACAACTTAGA
TGAAATGAACATA
>rnd-4_family-402#LTR/ERV1 ( Recon Family Size = 48, Final Multiple Alignment Size = 45 )
TGAGGAAGGAGACCCAGGCATCTAGGATCACCTCCCCCTTGACTTCCACA
CTGCATTTCAATAGAAGAAAAGGCTGGCCGACTGGCGCCTCCTNAATCAC
CTTCCTGTAGATAGCAGGCATGGTATGGGGGAATCTCTCCGGAAGGCACT
GTTTTTACTTAAACAAGATCAAACCCCCACCCCCCTCTCCATGGACCAAG
ACCCTTTCACATGTAATTCCTAAAACTGTAAACCCGAGACCCTTTCATAT
GTGATTCCTAAAACTGTAAACCGAAGACCCTTTCATATGTGATTCCTAAA
ACTGTAAACCCAAGACCCTTTCACATGTAATTTCTAAAGCTGTAAACCTA
AGATCCTTTCACGTGTAATATCTAGAGTGTAAGCCTATATAAAGGCGGAG
CCTTCCTTTGTTAGGGGAGCTTGGCCTGTTAGGCAACTATGCCGCCTTGC
TCCCGGCCGAATAAAATCACCCCTTCCTTCCCAGTTCGGTGTTCGAGAGG
TCTGTTTCCCGCGGCCGCTCCTGCTTCGAT
>rnd-4_family-1265#LTR/ERVK ( Recon Family Size = 46, Final Multiple Alignment Size = 44 )
GGGAGACCCCGCAAGTGCCGAGGCAGGAGCCTGAAGCCTCAGCCTGTTCC
CATATAAATANTGAANNAGAAAAGAATTAGAAATATAGNCACATAGTTAT
TCCTTTATATAATCATANGTAATCTTATAGTTACTCATAATCATAAAGAT
ATATACTCAATATAACCTTTNATTTTACTAATGNCTNTCGGGTCGTGAAG
CGTGGAACTGGGGTGACATTGTGAACGAAGTGACCCTAAGGCAAGATGCT
CTAAGCCCTCTGTCACGCCCGCATAAGGGCTGCTGGAGGGCGCCTCGGCT
GTGCGGCAGCGCCAGCGCTGGGAAAGCGCCCGCTGTTTAGCCAGCTAGGG
AAGGAGACGTCCAAGATGGCCGAGACGTCTCCTTCCCGGGGGAGTTAGGA
GAAAACTCCGCTCCTCCAAGCTCTTGCGGCGGGCCTGACGGCTGTCAGGG
AGGCCCGCAGACATCCGGGGGCTTAACTGTCTCTATGTGATGCTGTGCTT
CAGCGGTCACGTTCCATGTCTACTCTCACGTTCCGCTTCTGCACCTGGTT
CCTCTTTTTCTTAGAAGAATATCAGTAANAGTAACATAATCTTAATGTCT
TTGTTCTTTCTTGACAAGTATGGAAAAAGTGCTGACGCATTAGCTCCTCN
CCTCGCCTCGGCTACCTGAAAGTCCTGGGCCCCCTACCTNCANGACACGT
GATTTACCTGACCCTATCACTGACCACCANTGCCTCGCCCTACCTACCCT
GCCCCCTGCTTTGTACTCAATAAAAGTCAGAGCGTCCGGGCACTCGGGGC
CACTGCCGGTCTCCGCGNTTTGGTTGGCAGTGGACCCCCGGGCCCAAACT
CTCTTTTCTCTATCTCTGTGTCTTGTGTCTTTTATTTCCACAGTTTCTCG
TCTCCGCACCAGCAGGGAGGGGCTCACAGGACCCTGTAGGGCTGGACCCT
A
>rnd-4_family-95#LTR/ERV1 ( Recon Family Size = 125, Final Multiple Alignment Size = 44 )
AAGAAAAGAACTTTTATCTGAGGAATGCGAGTCCTTTTAAATTATCAGGC
CCAGAGAGACATTAAAATGAGACAGCAGTCACTGTCCTACTCCCCACCCT
TGAGCTATGTATTCATCTCTTGAAACTGCTTGCTATTGCCACAAGTCACA
AGAGCTATAAATTAACCTAATAATGCCACACCGGACACTATAACCCACAC
CCTATAGCTTAACAATGTATAGCCAATCACTAATCAATGTTATTTCTGTA
AACCAATGAGAATTCCTGACAAACAACTTTGTATCAGCCCACTCCNTGTC
CCCCTTTTTGCCTTTAAAAACCCGCTTGTAACTGCTGCTAATCGGAGCGT
ATATTCAGGGCAACTTGGATCTGTGCTCCCGGGCTGCAGTCCTCAANCTT
GGCCCAAATAAACTCTTACTTATATTAATTTTGCCTCAGCTTCTTCCTTT
TAGGTC
>rnd-4_family-232#LINE/L1 ( Recon Family Size = 46, Final Multiple Alignment Size = 44 )
TAGTAATGTTCTTCATTTGATAGAGTTTTGGGTTACACATATGTATACNT
TTGTCAAAACTCGGTAAATACATACTTAAGATTTNTGCATTTCATTATAT
GTAAATTTTACNTCAAAAGAAAAACAAGATACCGAACTCTAGTTAATGCA
CATTGAGATACTGATGTCTGCAATTTACTTTGAAATGCATCAAAAATAAG
ATGGATTGATGGATGGATAGAGAGATGGATANATGGATAGATATGTGATA
AAGCAAGTCTCCAAGGTGGTGAAGATACAGTAGTGTTCACTGTAAAATTC
TTTCAACTTTNCTGTATGTTTGAAAATTTTCATAATAAAATGTGAA
>rnd-4_family-530#LTR/ERVL-MaLR ( Recon Family Size = 50, Final Multiple Alignment Size = 43 )
AACATTGTGGGTGTTGTCTTGCTCTCTTGAAATACGTGCTCTGCAGGAAG
GCAGNTACNACGTCGTGAGGACACTCAAGACACTTCATAGGGCTCCTAAG
TGTCCAGGGAGCAAGGACATCTGGCCAAGAGACAGTACCACCTTTCCAGC
TATGTGAATCAGCAATGGATCCTCTGGTCCCATTAACAATCCTGTTTAAA
CCTTCAGAGATTGCAGTCCTTGCCAACCTCTTGACTGTAACTCTATGGCA
GACCCCGAGCCAGAACCGCCCAGCTAAATCACTCCTGATTCCAGACACAC
AGAAACTGTTTCATAATAAGCATTTCTTGCTGCTTAAGTCACTTAGTTTT
TGAGGATATTTTTTATGCAATAATAAGTAACTCACATATTTTCTGTTACA
GCCACTAGGCTCTCCAAGGTGTATGCACATTCTCTTTTTTTCTCCTGATT
TCAGGCTTCTTTCCCCAAAACAATCACAAATCCACTTGTCGTCAGTTCCC
TAAACTCATTGTCCAGGATATTAATCAAATGAGAGAAGGTACTTCAATGA
TCTGATTCAGTATGGTCTTCACCCAGCTGCCCCAAGAGGTTTCCATTTTG
TCCCAAAGCATTTCCTCATCATATACTCATGTTGAAAGCCTGAGATAAGG
TTGACTAGTGGTGTGACTGTCACAGGCTCTAGATCTGCTAAGAAACACCT
AATAAGATCTGAGCTACACCTGGTTGAAAAATTGGATCTAGAAATGATGG
GATCAGGGAACTCAATTATACTCTTGTTTATTTAATTCAGATTCCATGTT
TCTCTCTTTCAATCCTNCTACCATTCTCCTGTCCTGTATGATTTAACATC
CTTATTACTGAGAAACCAAAGCCATAGAAACTGATTAACTATAAATGTGC
TCATCCTTTATACAAATAATGTATCTATAAATCAGAACCCTTTATTTTTC
CAAAAAAAGTAAACTGTGAAACCACAAGCTCCCCCCGCCCACCGCCAAAG
ACCAGTTCATTTATGCAACTCCCAGGACCAAAAGAAATAACAGGTGAAAA
TCCTGAACTCATCCCATGTCTGCCCTAGGAAAACCCATGATATCTGTCTA
AAGGAAGGNAACAAGATGCTAGCCAGCGTATCAGGGGATTGCTTTCCATC
CCAGCTTTATGGTCAGGAGCAAACATCATCAAGTTCTTTGCAGTGGGGAT
GGAGAAGAGGGGCCGGCAACACCCTCCAGGAGACACTCTAGGATGCCACG
GGAAAACAGACAGCACTCCCTCCGAACCACTGCCCTAGTCAAGGGGGAAC
CAGGAATTTAGGGAAGACCCAGCCTATCTAGGGTGGACCAACATAAATGC
CATGACAAGGGAGCATCTGGAAGTCTGAAAATAACCAGAACAGAGAAAGA
GAATAGAGGGAACAGAGAAGGTCACCAACATGTGTCATCCATCTATGGTG
GGCCTGGTACTCTGCTGAGTGATGGATACTTAGAATCTTATTTAAGTCTC
CCAACTGCATAGGGTTAAGAGCATCTGCTTTGGCGGGCGCCTAACTTCAA
ACCCTCTCTCTGGTGATATGATATTGAGAAAGCCATTTGAACTCTCTGAG
CCTCAGTTTCCTTCCACGTAAAGCAGAGTAGTNGTTGTAATACAGAAGAC
AGACTTTACAAAACGAGTATCTTTAGTATCATCATGAGGGAGAAATGAAA
TAACTGCAAGTGCTTCTCAAACTTTCCAAGAGCATACGAATTACTCGGAG
ANTTTGNTNAAATGAATATTCTTGTTCATTCAATCAGAATCTCTAGGTAA
TTTGGGGTTTGGCCTGAGANTCTACATTTCTNGCAAGCATCCCAGGCGAT
GCTAATGCTGCTGGTCCANGGACCACACTTTGGGTAGCGAGGATATAAAA
CACTCATAACCTTCAGTGATTATTACTGNTGTTAATATGTTAACGTGATC
TCCCTAGCAAGAGCAGCAGAGCTGGTAAGTGGCAGAGCCAGGGTACAAAT
TTAGGACTAANTCTCCACCNCTTCCTCCATTCTTATTTACCTCTCAAAGG
AGCCAGATATGGTTGGAACAGAGATAAGCCATTTCTGTTCCATTTCTTCA
GTTATCTCCCTGCCCAGTGACTTCGTGTGACATTTCAACCCTGATATCTC
AAAGTCTCCAGAAAGTGCAGCAAAGACGTTATNGATTCACTGCATCCTCC
ATCATATTCTTTTATACTGAGGACTTTCTCGGTTNCCCAGAAAACTTCTG
TCAGCAAAGACAGATTCAATCAAAAAAATGAAAATTGAGGCTTAATACAG
CCTGAGGATGAAAGTGATTAACTAGGAGATGGGAGATTAACCCCCTGGGC
CACNTCTCAGAGACAAGCAGGGACTGACTGTTCCATGTCCATTAGAATTA
ATTCACCACTGCCTTCCCTGGGAATCACAGAGAGGAGGTTCTCTTCTAAG
ATTCAACAGGCCCAGAGACATGGGCATGGGGCTTAACTCNCATTGCCTCT
CAATGGACGGTTGGACCTGAACAAGCAGATATTCGGCTTTAGAGAGGTTA
TGGTAAGGTTGCCAAGATGAGTNTGGCATCATTATTTTATACTTACGGTA
CCTTTGAGGCAAGAGTGCTTTGCATTTTTTAATTAGTTTATCTTAAAAAC
ACCAGTAGTCATGGAAAAAGAAAGCAGAGATCAATTCTGAAAGAGAGAAN
AAAGGGAGCAATCCTCACATCCAAAACCTTGATGTCAGACACTTTAGAGA
TTGTGCATATTGGAGCTGGGTGTCGCTGCAGACACATGGGCAGCTAGTTG
TGAAAGTTTGAGACCAATTGATGTACTTGCAAGCACAGCTAGTTTAAAAC
TGCACTAATAATGGTTCTGACTGATAACAGGTGCTATTCTGTCCCAGGCA
CTGTGTTAAGCACTATAAATGCATTGTCACCGTCATCTCTCCAATATTCT
TATGGAAGATGGCTCTGTTCTCCCTTTTTTACCAAGAATTGGAGTGATGT
TACTTCCCTAAGTTTTCATAGGCAGAGGCAGTGCTACAAACAAATATACT
TGTNGACGTGAATTGAATCATTTGGTAGAAACGAGATTCAGCCGCTCATC
AGAGCACAGAATTTGAGCCAGAATACAAGACAAGAGTCTTGTTGTTATTT
GCCAACATCAAAGCACTATCACCCCCAGCNTTTTCTAGTTATACAAACCA
CTCAACAGAATACATGTGAGCTTTACCTGTGGGCAGCATACTGGGAGTTC
NAACGACTTCTTGATGTGGCTATCATTCCTTAGCAATGGGTCTCTCCTGC
TTCCAGTTATGGCCAGTGACAATGTGATGAAATCCNCACAGGACATGGCA
TCAGAAAGCCTGAGTTTGCATTCAGGTAATAAATGTNCCCAGGGAACTTA
GGAAAAGTAACTAANTTTTCTGATGCTGTATCCTCTTCCGTAAAATGNGG
CAAATGCTATTTACTTTAAAGGACTCATGACCTTCAGTGATTATTNCTGG
AGTTAGTATGTTACGTGATCNCCCTAGCAAGAGCAGCAGAGCTGGCAANT
GGCAGAACCAGGGTACAAATTCGGGACTAAAACTCCCCCTTTTCATCCAT
CCCTATTTCCCTCTCAAAAGCAGCCAGATATGCTTGGAACTGTAAAATGG
GGCAAATGCTATTTACTTTAAAGGACTCNTGACCTTCAGTGATTATTNCT
GGAGTNAGTATGTTACGTGATCTCCCTAGCAAGAGCAGNAGAGCTGGCAA
GTGGCAGAAGAAGGGTACAAATTCGGGACTAAAACTCATATAG
>rnd-4_family-1847#DNA/TcMar-Tigger ( Recon Family Size = 46, Final Multiple Alignment Size = 42 )
TGAGAAAAAAAAATCGATTCCCGGCCGGGGCCACTGTCTGTGTGGAGTTT
GCACGTTCTCCCCATGTCTGCGTGGGTTTTCTCCGGGTACTCCGGTTTCC
TCCCACATCCCAAAGATGTGCACGTTAGGTTAATTGGCGTGTCTAAATTG
TCCCAGTNTGAGTGAGTGTGGGTGTGTGTGTGTGAGTGCGCCTGCGATGG
GATGGCGTCCTGTCCAGGGCTGGTTCCCGCCTTGCGCCCTGAGCTGCCGG
GATAGGCTCCGGCCACCCGCGACCCTGAACTGGAATAANTGGGTTGGAAA
ATGAATTAATGAATGAATACAAATTATTGTAAAATAAAAATTCGTAAAGT
ATACGATAATCATACAGATGCACAACAATAAATGATGTGGTACATAAAGC
GCTCAGCGAGCCCGCCATATTTGTTCTTGTTTGTTTTTGAACTGCGTGGT
GGTAGGAGGTGCTCCTTACAATTTTCGCTTTGCAAACATTTATTCCTTGA
TTTAACCCACCGCCACTACGACCGCCGTCACTCACTGATTCACCAAAACT
TGGGTAAATAATTATCTTACTTGTTTTTATTAATCTTTCTTAAATGTATG
TATAGCTCACATTTATTTCAATGTTTAATATTAGAAGTGTTTTTGGGGTC
TTTATTTAGAAGTTTGGTGATGTTTTTGTGACCAGAAATATGCCGTAGGA
ACTTAACTCTTGTTTATATCAATTAGCCTATGGTAAAATTGGTTTTATTA
TTTTGCTTAAAGTCGCAGTTTCCAAGAACCTATCGACGACGTTAAGTGAG
GACTTACTGT
>rnd-4_family-153#Simple_repeat ( Recon Family Size = 42, Final Multiple Alignment Size = 42 )
CCACCACAACAACCACCATTACCACCATAAACCCCATCACCTTTATCATC
ACCAACAAGAATATCACCACTGCCATCATNACNACGNTANCAATCACTGC
CACCGCCGTCACTGCCATCACCGCCGCCGCCGCCACCGTCACAAGCCTCA
CCACCACGATCACTCCTTCCACCNTCAATTTCACAAANANCANNATCACC
ACCACTGTCACGATCGTCATCNCTNCCACATNNCCAGCATAGTNATNANC
ACNACCATTACATNATCNCCATCATTGCCACCACTGTCACCATCAAGCAC
CGCCACCACATTCATCGACNCTANCATCGCCACCNCCACCATCACCGTCA
CCACTGTCNTCACCANCGCCANTACCATCACCGTCAGCACCATCAGCACC
GTCCCCACCGTCATCACACCACCGTCACCGCCGCCGACAACACACCTCCG
TTGTCACCACCATCATCACCACCACCATCNCTGTCACCATCACCGCCATT
ACCATCACCACCGTCATCACCATCATCGCCACCACCNCCACCACCATCAT
CACCACCGCCATCACCGTCGCCACCACCATCATCATCACCATCACCATCA
TCACCATCGCCATCATCACCATCATCACCATCATCATCATCACCATCACC
ACCATCACCATCATCACCACCACTATCATCACCATCATCATCACCATCAC
CACCACCATCATCATCACCATCATCACTATCATCATTACCATCANCATCA
CCATCATCANCACCACCACCATCACCATCACCAACCGTCACCACNATCAC
CATCACCACACCATCATCACCACCAATTACCTCCNCCACCATCATCACCG
TCACATTACCATCACCGCCATCGTCCCACCATCACCGTNACCACCGCCAC
NATCATCACCACCGCCATCATCATCATCACCACCACCATCATCGTCACCA
CCGCCATCNTCACCGTCACCAATGTANCACCGTCACTACCACCACCACTG
TCACACCACCATCACTACCACCATCACCACTGCCGCNATCTCCACCATCA
CAACCGTCACTACTGCCCTCAGCTTCACCACCGCCACTATCACCAGCAGT
CACCGCCATCATCATTACCACCACCACCATCATCACCACCATCACCACCA
CCACNANCACCACCTTCATCACNGCCGCCATCCATCACCNCCCCCGCCAN
TATGGCCCTCCACCACCGCCATCACCGTGCCACCGNAACCATCGTCACCA
CCTCACCACCACCACCACNCCNCGGTGACCACCACTGTCANCATCACCGC
CAGTCCACCACTACNACCANCACCACGCCATCNCCGCCACCACCGCCGTC
ACCGTAANAGCGCCGTCATCANCGTCACCACCATCACCATTATTCCACCA
TNATCATNATCATCGCCANNATCACCACCGTCACCATCACCGTCACCACC
NNCATGTACACCGTTGCCACTCCCGCAAAGCTANCATNNCCAAAATGACC
ACCANCACCGCCACCNCCACCATCATNACNANCACCACCATNNCCACCAC
NACGCANCATCACTACCACTCCCACCANTCGCTACNACCATCACCACCGC
ACCGCCGTAATCACCGCCACCATCCTCACCNCCNCCTCTATCCCCACCAN
CGTCAACATCACCGGACCACCACCACCATCGTTATCACCATCACCGCCAC
NATCGCCATCACCGCCATCACCACCACNANCACCACAACTATCACNACCA
CCACTGCCATCACCACTGCCAAAATGTCCACCACCNTCGTCACCACCACC
NTCATCATCATTACCAACACCGTCGCCACCACAGTAACTACCACCACCAC
CGCCATTTGCACCACCACCATCATCATCATTCCCACCACCATCACCACCA
CCATCGTCACCACCANCTTCACCTGNCAGCAACACTACCACCATCACCAC
AGGAACTACCACCACCACTGNCAGCATTTGCACCACCGCCANCATCACCG
NCATTACCATTCCCACCACCATCGCCGTCATCGCCATCACCATCGTCATT
ATCATCATCANCACCACAGTAACTACCACCA
>rnd-4_family-911#LTR/ERV1 ( Recon Family Size = 43, Final Multiple Alignment Size = 42 )
AGTTGTCAGAATCAAAATGGAGTCACTTGTGTTAAAAAAAAACCCTGACA
AATAGAGCCGGGGAAGGCCATGAAGAGAGGGTTCTCATGCATAAATGCCT
GATAACAAAAACTATCACAAAAGACTGCAAAAACCACAACCTTGCACAAA
GGCCATCGCAACCTTACACAAAGGCCACGAATACAAAAATACTTCTGCGA
GGACATCTGCCCAGCAACTGCCTGTCCAACCTCGGACTGGCGCCACCCTT
GTTACTGATCCTTGTAGCCAAGGATAATTATCTCAAAACAATTATGTAAT
CCTCCTCATTTTTCCTTTAAAAACCTTTGTCTTCCTTTACCTCCCTGAAT
ATGCACATAGTTTACTATGGCACGCGTATTCCCATTGCAATGCCCTATTC
CCGAATAAATATCATTTTCTTTTAGAGAGCCTCTCTCTGTTTGTATTTAG
G
>rnd-4_family-1653#LINE/L1 ( Recon Family Size = 45, Final Multiple Alignment Size = 42 )
AAAATCATTTAGGAGGTCAGGGGATCCCAGGATGGAATGCAGAATGTGAC
AAAANAATCTAACTGTATTACAAATGTATGAAACAACCTCACTGAAGGGG
GTGGGGGANAAAGGTGCTGACCTAAGTAACTTTGGAAATGAGTGGAGTCT
GTAAGACTAAAGGCAAAAGGAACTGTACATAAGCACTGTACTCTAGTTGA
TAAAGTTGTTTCCCACGGGGGTACGGGTTAACAATTCTGANACCGCTATA
CATGTATACTGGAATTGAACAATTAAGTAA
>rnd-4_family-790#LINE/L1 ( Recon Family Size = 42, Final Multiple Alignment Size = 41 )
GCCAGAATGGCAGCGTGAGGAGCTCTGCGGATCCACTCCCCAGTGAAACA
ACCATAACTGGTGAAAATTATAAAACAGACCATTTAAAGTCTCTGGAAAT
TGTCCTAAGGGCATACAGCAAATGAAGAAACATTTATTCAAGAAAATCTA
CTAAATCTCGGTAAGAACAGCGAGAGTCTGTGGCATTTGAGCCACGACCT
GCTCCCTCCCTTCCCCCCAGCTCAGCGTGATGGAAGCTCCACTCCAGGCG
GGTGCGGCCAAGAACACGGGGCTCCCTCTCCCCCCAGCTCCCAGTCGAGG
GCTACGGTATCTTCCCGGGAGGGGCAGGCCGCCAGCATTTCTCATCCAAC
CAAAGAAGTCGGAGGCTCCCTTCCTCCACCCAGCCCCCACTCGTAGGGCG
GAGGCTCTACCCCGGGCACGGCAGGCTGAGAATACTGGGGCCCCGATCGC
CCTCNCCCCAGCTCGCTCGTAGGGCGGAGGTTCCATGCCGGGAGAGGCAA
GCCGAGAAGACCAGAGGCTACCACTCATCCTCCCATCCAGCGCCCTAGCT
CGTAAAGCAGAGGTGTCACTCCGAGAGAAGCGGGCCACTGTCCCCGCCCC
CAGCTCCGGAGCAGTGGCTCAGAGATTTTGCCCAGGAGGAGAGGCAGGCT
ATAAGAACAGAGAGCTCCGAAGCTCTTCCCAAAGGAACTGACTTTATTTG
GAACAGAGCGTGGGGAAGTTCAAGCCTAAGGGCGCTCTCAAAAACAGTGG
AGAGTTTGGTGGTAAGCAATTAAGAGGAGGCTGGTAGCTCCATGAGAGCN
ACAAGCTAAACTATAGGCCAGCTAGTTTANCAGAGAGAACCAAGGGAAAA
GAGATAGCTAAGAAGAGCCCTCCTGGGGTCAGAACAAACCTCAAAGACTG
GCCTCAAAAACTATCCCTGCAAAGGAGCCCGAATTTAATTGGATCAGACT
GTGGAGCAATTTATGCCCCAGGGCATTGTCGAAAACAATAGAGCAATCAG
CCGGCAATTAGTGGAGCCTAACAGCTGGGTGTGATACCAGCAAGGCAGAC
AGCTTAACAGAGAGATCAGGGAAAGAAGACGAGAGAGCCCTGCTAAACCA
CTGTCATCCCAGGGTGACTTGGGCACGCCCAAGGCTGTGCCCTCT
>rnd-4_family-1671#LTR/ERVL ( Recon Family Size = 43, Final Multiple Alignment Size = 41 )
TTATTAAGCTATTGTCTCTCAGCTCCAAACCCACCCTTCTATACTCTGCT
TTGTGATGCTGGGGCTGGGACTCTGCAAACCACATTTCTCTTTGCCAGAG
CTGCTTCCTGTTAGGCTCTGCCAATAGGGGCGCTAGAGGGAGACTGGAAG
GCNGGAGAGAGGGAGAAGGGACTTGCTCCTTCCTGTTTGCTTCCTGTTCC
TATCAGCACCCAGCAATGGCTCTTCACCCCGCGCGGCAGCTGGTTCCAGC
AGTAGCTTCCAGTTTCCGGCTTCTCTCGGCACTCCCAGAACCAGCCTCAT
TGCACCCCCTCAGAGGCACCAGCACCAGCCGGGCAGCGCCCCCTCCTCAG
GGGTCCCAGCTCCGCGGGGCTCCTCTAAGCTTCTAGGTTCCGATAACTCC
AACCTCTTCCCTTTGTTCTCCAGCCCTGGGGGTAGTGGCTGCTTCCTGCA
GTGTTCCCTTTTTGCCTTTCAGTTCTCCAACACCTGTTTAACCAATTCCC
TATGTTAAATTCTCTCCGTTAAAATACCTAGTGTGGTTTCTGTTTTCCTG
ACTGGACCCTCA
>rnd-4_family-131#LTR/ERVL ( Recon Family Size = 41, Final Multiple Alignment Size = 40 )
GAGGCCAAAGCGACTCCATCTTGGATGCTAATCCGCCATGTTGACTTCTG
ATTAACCCCAGTTCCGGGAATGCCTCTAAGATTTCTAGTTTATCTACTGT
TCCTTGTGTAAGAGCACGTACTTACCGTAAATCCTGCCCTTAGGTCAAAA
CAACCTTGATGTTCTGCAATCGTACNTCAGTTGTCCTACACATCCCTTCT
GAAGCACGTATACCCTTTCCCTACGGTATATAAGCCCTGGGTCTGGGGGG
TAATGGCGCGGGGATCCACCATCTTGTCTCGCCGCCGCCCGAGACACAGA
CATGGCTTCTGTTCGTAAGTCCCTATTAAATGTTNCTTTCTGAGAAACTG
GATTTGTCAGCCTCTTTCTTTGGCCTCTCGGCTTCCTCGGACTTTGGGGT
AGGTTTGCATAGACCTGCC
>rnd-4_family-168#LINE/L1 ( Recon Family Size = 44, Final Multiple Alignment Size = 40 )
CATAATGGCAAAGAGAAATAAACCACATTTATAACAGAAGAGTAACAAAT
ATTTAGGAATAAACTTAACAAGAAATGTGTAAAATCCATATGAAGAAAAC
NTNAAAACACTCCTGAAGGACACAAAAGTAGATTTGAACAAATGGAAANA
GCATACCGTATGTTCTTGGATAGGAAAACTCATGACATGCATCCCTAAGT
TAATTTATAAATTTAATATAATCCCAATAAAAATACCAACAACTTTTNTT
ATGGAGCTAGACAAGTTGATTCTAAAGTTTATATGGAAAAATAAACANGC
AAGAATAGCCAGGAAAACCACCGAAAAAAGAAGAGCATGAAGGAGGACTA
GCCTTACCAGATATTAAAACATATTATAAAGCCTCTATAATTAAAACAGT
GTGGTACTGGCGCATGAATAGACAGANAGACCAGTGGAACAGAATAGAAA
GTCCAGAAATAGATCCAAGTACATATAGAAATTTAGTATATGATAAAGGT
GGCATCTCAAATCANTGGGGNAAAGATGAACCAATTAGAAAGCCGTTTGG
AAAAAGATAAAATTNGGAACCAGTCTACACCATNTCACACCAAAGAAGAA
TAAACTCCAGATGNATACAGAGATCTAAATGTAAAAAATGAAACTTACAA
GTCACTAGAAGAAAACANGGGTGAATTCCTCTTTAATCTCGGTGTAGGAA
AGGCTTTCTAACTATGACTCAAAATCCAGAGGCAATATAAAAGAATACTT
ATAAATTTGACTACATAAAATCA
>rnd-4_family-463#DNA/hAT-Tip100 ( Recon Family Size = 41, Final Multiple Alignment Size = 40 )
ATGGTGTGCTGGAGCCGGCTCGTACCGGCTCACGAGAGCCGACTGTTAAA
TTTTCAGGAATTTTGCGAGCCGGTTGTTAAACACGGCCATTATTAAAAAT
TAAATTATATAAACTTACAATTAAATAAATTATATTAAAAACAAAGGTAA
TAAATACTCAAAACTCATCACTTCCTAATTATTTTACTGTTTTACTATTG
ATATTATCTACGTCTTGAGGTGTATCTGTATGGTGGAAATACTATATAAT
GGTGTGCTACTGCACATCTCTTCCCAACTCCGCATTCAGTGACGTCACGT
TGGTAGCTTGAAATCGGCCATGGTGGGAGTATTTACACCACGGAAATCGG
CAAACGCTACAAATCAGGGCTTTTTTCCCTTCCTNTCCCAGAGAGCCGGT
TGTTAAACATTTACCAGCACACCACTGATTATAAAGCANATATANTTNTC
TTCTATCATGATCACTAAAGAAAGAGAAATAAGGTAGGAAAAAACAAAT
>rnd-4_family-546#DNA/hAT-Tip100 ( Recon Family Size = 44, Final Multiple Alignment Size = 40 )
CTTAGACCCGGGCAAGAGGGACCCTTNCCCGGGNCCTGTGCTTTTAGGGG
CTCCCCCTCTGGCCCTCCTCTGGCGCTGGCCTCTCCCCACGGGGCGAGGA
GTCACGAGGCCAAGGGACGTGCCCACCCGGAGCCCGCGCCCTACCCCCTT
CTAGACCACGCTCCAGGNACCCGGACCCCGGATTTCCTGCCCAAACGGCC
CTGAGCCCGCTTCCAGGGCCTGCGCNGGCCTCTTCCCCGGGTCCGTCCTC
CGGAGTGGAAGCCGCGCTTCCAGGGGTACACTCCTAGGCCTAGGAGTGGC
CGAGGGGCGGCTGTTTGTAGGGGGTGTGGACGGAGCTTGGACGTGCGGGC
TGGGGTGTCCACGTAGAGTGCAAGGCCCCTTATGCTNTGGGACGGAGCCA
GGGTAAAAGAGAAAGGGGCAGGACGGGGCCGTGNTGTCATCTCCCGCCAC
GTCACNGCATCAGAAGNCTCTAAATTCGAACCTGGCCTTCCAGGTCGTTA
TGAAGGTATATTTGTCAAGGTAGGAGAATAGAACATATTTTATTTAACAG
TTTGTTAGCTTGATTTATAACTTTTAAATATTTAGACATATGGTATGTGG
GCCTCCATTTGTACTCTTGCCCCGGGCCCTGCAAATGTTAGGGCCT
>rnd-4_family-2344#LTR/ERV1 ( Recon Family Size = 44, Final Multiple Alignment Size = 39 )
TGTGATAACCTGCTTTTTGCCAGCTAAAACTAACTCTCTCTTTCTCAGAC
TAAAAGCTGTTCAGGCTTCATGTTAGCTTCCTGAGCCGGACAGACTCCAT
CTTAGCTTCTTCATTTTAGTTATTTTCCCACCATTAAGTACGTAACTGTA
GTATGTAGCTGGGGCAGGCTGACACTGGGCACCTCCAGGAATGCATTTGT
TGATAAGAGGCCGAGTTAAGTGGTACCAGCAGAGCCTGGGAATGCAGGTG
CCGTCGAGCGCCCAGAGCCCCCATTATCTATAAGTTGTATGTCTTTCATG
ACAGCTTTACCCCTCGCACCTGGCACTGTTTTATTTCTCATGTACCAGCT
TATCTTCTAACTTGCTTATTCTGCTTCTGTGAAAATTCCGCTTCAGCTAG
GCTCCCCCTCCCCTACCTAAANCAAGGTATAAAAGGNAATCAAGCCCCTT
CCTCGGGGCCGAGAGAATTTTGAGCGTTAGCCGCCTCTCGGTCGCCGGCA
TAATAAAGGACTCNTAATTCAATCTCAGAGTGTGGCGCNTTCCTTCTAAC
TCGCTCGGGTACAAC
>rnd-4_family-548#LTR/ERV1 ( Recon Family Size = 40, Final Multiple Alignment Size = 39 )
ATAATAGCCCTTCCCAAAACTAAACCGCCTTTGTAAAACTAATGAAAGGC
CACNAGGTTAGGATNATGAGAGGGGCCTGAATTCTGCTAAGATGTAGGCA
TAGTTAAACGATNACCAGCCATTGTTCCGGAGGTCACAAGATTTGCAACT
TCCCCAATTACTCCTGCAGATAACATCACTATTGTAGA
>rnd-4_family-703#LINE/L1 ( Recon Family Size = 39, Final Multiple Alignment Size = 39 )
AGTATAGCATCTGCAGGCAGAATAACACTGCNCCCAGGAAGGAGAAAACT
GCGCGACCTCAGCTATCACCACTGCCTGCANCACCCTGGCTAACCAGGAG
GTCCTGAGTCTGTCCACGTGACCAGTTCATTACTACTACAACCGGCATTC
GAGAAAGCCAGCACACTAAGGCTATCTACAACCAAGGAAACTCTCACAGA
GTCCACTTCACTCCCTGCCACCTCCACCGGAGCAGGTG
>rnd-4_family-191#LTR/ERV1 ( Recon Family Size = 38, Final Multiple Alignment Size = 38 )
TGTAAGGCCGGTTGCCTCGCCGGGAGCCAAACGGACACACCCATCCCTCT
CCGCGCCTGATAACTGCGTCATCACCCGAGCTCATTATCTGGCTTCCCCA
CGNAGCTTCCCCGCACCCGCCTCTGCATACCGCGCCCAAGCCCACACTCA
GCACTAAACTATGCATCCAACCTCCAGCCCGCCGTTGAAAACCCTGCAGA
GAAATTTTTTTAAAAGAAGCCCCGCCANNCCCTGCCCAGCAGCAGCCTGC
CCCGTACGCCCCCGGCAGGCCCGCGTACCCAAGGTCCCGCCCGCCTACCA
ATGGCAGCTAGTTTCATGTACTTCCTACTTTAACTCCATGTACTTCCTGC
TCCTCAACAGCCAATAGAAATGCCTTCTCTTTGTTTCCCCAGTAGCCAAT
CAAGGCCCACTTACCCAAGGTCCCGCCCGCCTACCAATGGCAGCTAGTTT
CATGTACTTCCTACTTTAACTCCATGTACTTCCTGCTCCTCAACAGCCAA
TAGAAATGCCTTCTCTTTGTTTCCCCAGTAGCCAATCACGGCCCGCTCAC
CGGAAATCCCGCCTACCTACCAATAGCAGCTCGCCCCGTCCACGTCCTGT
TTCTCCACAGCCAATGAAATTGCCTACGCTTTGTTTCCCCAATAACCAAT
CA
>rnd-4_family-121#LTR/ERVL-MaLR ( Recon Family Size = 40, Final Multiple Alignment Size = 38 )
AGGCGGAGACAATGCTATGTGTTCACCAAACTNCTNTTCTTTTCCTCCTG
GGCACACAGCTAGACTACATTTCCCAGCCTCCCTTGCAGTTAGGTGTGGC
CATGTGACTGAGTTCTGGCCAATGGAATGTGAGCGGAAGTGATGCGCGCC
ACTTCCAGGCCTGGCCCTGAAACTTCCCGTGCAATCCTCCACTCTTTCTC
TCCCTTNCCTGTCAGCCGGACGCGGAGGATCCAGCAGAGGACTCTAAGGC
CCTGGCAGATGGGACCCGTCATGGAGGCAAACTCCGGTTCCTGATGACGA
TGCAGAGTGCCCTCCACTCACAACAATGACTNGCGCTGAACTGTGACATG
AGCGAGAAATAANCTTTATTGTGTTAAGCCACTGAGATTTGGGNTTGCGT
TTGTTACAGCAGCTAGCATCTCTATCCTGACTAATACAC
>rnd-4_family-1731#LTR/ERV1 ( Recon Family Size = 40, Final Multiple Alignment Size = 38 )
CAAGGCCTTAACGTTCCCTCAGCTTGACTAAACTTTAGACAGGTTTCTTC
CTGACTCTAGGCCCCTGACCTCCCTTTTCTTAGAGCATTTACTTTAGAAA
ACTTGCAATTGTAAATTCTTTCTCTGCCCCTTTGAGATGTAAATNTTTTT
AAAGCCTCTTGCCAGTTTTACAACCCAGGAATGTCTTTCTCAAGGACCTG
GGAGCCATCCCTTTGAAATGTAATCATCAAGGAAGATAGCGCCCCTATCT
CCCAGTCTCTGTGGGAGGGTAGGAGCCTAACTTCTCAGTTGCAAAACTAC
CTCCTGTCACGAAGATANGAGAAAGTTTATTTTCCTTTGGGTAAGGCCAA
TTAGCAAACACAGATGGCCTATGATCTCCCCCTCACTCCAGCTCTTAAAA
ACTCTCCTGCCTTTTGTTTCAGCGGAGTTGAGTTCAGACTTCTGGTACGC
TCTCTCCCCTATTGCAATAGCCTTGAATAAAGTCTTCCTTGCCTGTTTAA
CTTTGTCCAGTGCAATTTTTCTTT
>rnd-4_family-2621#LTR/ERV1 ( Recon Family Size = 39, Final Multiple Alignment Size = 38 )
TAGATATAGTGAACTCCAAGTTTCTCTTCAAAGAATCAGTATGTCAGTAT
GTTCAGCTCTCTTATTCTTTAATTCTCCATTTTAAAGTTTAACTTCCTTG
TAGTTTCAGTAAACAACCTTCTCCACCGGTTCTAATCAGTAGTTCACATC
TGTTCCCCTGGTCCCCTGCTCCGTCCTGACTCATCCTGGTCACCTGCTCC
GGTCACCTGCTTTGACCTGAGTCACCCCTGGTCACCTGCTCTGACCTGCC
TCCTCCCGTAACCGTCCTTCCCGCCAAACTACCCACCCCGCCACTCCGGC
TCGTACCCCTGCTCTCTTTAA
>rnd-4_family-3440#LTR/ERVL ( Recon Family Size = 40, Final Multiple Alignment Size = 37 )
AGGGTAGACGCACCTGACAGCAATAACTTAAGCATACCCTGAGAATGACC
CTGTATGGCAGACGCACCTGAATGTGTGTTCCGAGCTAAGGAATCCGGGA
GTGGCCAACCCGGAGATTCATTCCTTATCTATGAGGAACATCTGAGCCCC
CGGCCCGTCCCGTGGAACGCGGGCCGTACAGGGGATCGAGGCCCTTTGTT
TTGGGGTTAAATGAAGGTTGCCAGGTGGAGGTCGTTAGGGGGAGGGTGCT
AAGTGAAAATGCTATATAAACTGCATGCTTTTTACAAGCGGTNGCGGTTC
TCCTGTCCAGCCCGCCGCCACTGGACTGTATGTAAGGCGGTTNTCCTGCC
CAGCCCGCCGCCACTGGACCGTTTCTGTACGTAAGGCGGTTCTCCTGTCC
AGCCCGCCGCCACTGGACTCTCCGCCCTGTATGTAAGTCCCCAATAAAAC
CCCATGTCTCGTTTGCTGGCTCCGGGTCTCTTCTTCGGCCTCTCGAACCT
GGTGCCATCCCTACTGAAGTTAATAGGGGTTTGA
>rnd-4_family-3147#LTR/ERVK ( Recon Family Size = 39, Final Multiple Alignment Size = 37 )
GTGGGTAACCCCCCNCATGGGCACCGAGGAAGGAGAGCTGNGCAGANCCC
NGGCACAATTAGTGCCTGAAGAATATCTCAGTTTATAGTGTTACTACTCA
GCTATTTCCTTTATATAATCCTTCATATATAATCATATATTAGTTTATAG
AATTAGTGCTTGAAGNATANCTTACTACTTACATATATCTAGCATACTTA
GTTCTATATAATCTTTCTATATAATCATATANCGGTAGTTGTAGTCGGAG
CTGTACTGACACATTTAGTGCTGATTTATATAATCCTTCTATATAACCAT
ATAGTAGTTTGTAGTCGGAGGAATGCCTAGAGCAGTCACAGAACAGAAGC
AGTACATGGGAAAACAGCCAGACCAGGACGAGAACCAAAGACCCAGGCGG
CGGCGTCCCTGCCTGAAAGGGCATACGCTGTATGGCAGGCTTGGGGCGAG
AGCCNCTCCTCCTGATAAAGGAGTTGTAGNACCTTGCATCCAGTTCCTGT
GGAAAGTNGGCCTCAGGCCTGAGATCCTGGAAGTAACCGAGGGAGAAGAA
CCCCTCTGGTGTGACCAGTCACGGCGGCTGTACACCCTGTCAGTCTTTTC
TCGCTNCTGTGCTGGCTCAAANCATCCTCCCATAAATATCTTAAGAGAAG
AGCGCAAGTCTGTCAGCTCCCACTGCATTGGCTTACAGCATCCTTCTATT
AGAAATCCTTTGAAGTCNCCAGCCCCCAGATAAGAAGTGC
>rnd-4_family-612#LINE/L1 ( Recon Family Size = 39, Final Multiple Alignment Size = 37 )
ACGGGATTACAGCTGAAAGAACTGCAAGGCNCAGACTCTATTTAAGAAGG
AGTCTCTAGGGAAACCCAAAGACAACAGGGGAGACAAAAACAAGGACACT
AGAGGAAATTNNAGCCTCTGGCACCTACAGCTACAGCAAACANTAAACAC
AGCCTAACTCC
>rnd-4_family-1566#LTR/ERVL ( Recon Family Size = 36, Final Multiple Alignment Size = 36 )
TGCTGTTTGGAGCCTTTGGCAGGCCCCCATAGGTGAATCACAGCGGAGGC
CTCTAGGATTTTGGAGCAAGGCCCTGCCATCTTCTGCGGATAACTACTCT
CCTTTTGAGAGACAGCTCTTGGCCTGCTACTGGGCCTTGGTAGAAACTGA
ACGCTTGACCATGGGTCACCAAGTCAC
>rnd-4_family-96#LINE/L1 ( Recon Family Size = 45, Final Multiple Alignment Size = 36 )
AAAATAAAGCCAAAGGAAGGAAATAAGAGCAGAAATCAATAAAATTAAAA
ACAAAATCAACGAAACCAAAAGCTGGTTCTTTGAAAAGATCAATAAAATT
GATAAACCTCTAGCAAGACTGACCAGAAAAAGAGAAAAANAGAAGACACA
AATTACCAATATCAGGAATGAAACAGGGGATATCACTACAGANCCTGCAG
ACATAAGAAATATTAACAACTCTACACACATAAATTTGACAACTTGAATA
AATTGGACCAATTCCTNNAAAANTACAAACTACCACAACTCACCCAATAT
GAAATAGATAATTTGAATAGTCCTATAA
>rnd-4_family-76#DNA/hAT-Tip100 ( Recon Family Size = 41, Final Multiple Alignment Size = 35 )
AGTGGTGTGCTGGAGCCGGCTCGTACCGGCTCGTGAGAGCCGATTGTGCC
ATCTCTTCCCAACTCCGCGTTCAGTGACGTCACGTTGGTAGCTTGAAATC
AGCCGTGGTGGGAGTATTTACACCACGGAAATTGGCAAACGCTACAAATC
AGGGATTTTCTTTCTTCCCTCCTAGAGAGCCGGTTGTTAAACATTTACCA
GCACACCACTGGACGTATNAACTGCGAATNTGAATGC
>rnd-4_family-240#LINE/L1 ( Recon Family Size = 39, Final Multiple Alignment Size = 34 )
TGTAAAATTACATGTCATTAGAGGGAGAGGGGCTTCAAGATGGCTGACTA
GAGGCATCTGGTACTCGCCTCCTCCACAAAGAAGAACCAAAATAGCGAGT
AGATAATCACACTTCGAATAGATCATCTAAGAGAGAACGCTGGAATTCAA
CAGAGAAGTGACAGGAAACACCTAAGGCAAGGAAGGAGAGGGAAGCGAGG
CAGCCTGCTCGGCCGGGATCGGCTGGGAGCCTGGAGAGGCTCCCCAATGC
GGGGAAAGGGTAAGTGAGAGACCCCAGCGGTCCCACCGCGGACTCCTGCA
ATCCTAGCCACGGGAGAGCCCCTCGACCCTCGCGGGCCCTGAGACTAACA
TAGGGAGCTGCCTGGAGACCGTGCGACGGCATTGCTCCAGAGAGGGAGCT
CACGCTGGGTCCCACCACACTCCTNCGAGTCCTAAGCAGCTACAGCANGG
CGCCATTTTGAGAGCCCGGCCCCCANCAGACTGCGTCCTGCCCTGGGGCC
CAACAGCCCCTGCATCTCCACATCCCTGGAGCNCCATTGACATCCTCCCT
GCCGGCCCCACCGNGCTGGCTGCTGCCGCCAGGGCCGAAGCGCGAGCCAT
TGGCAGCGACCCCGCCACCCCCAGCAGCGGAGCGCNNNCATGCATTTTCA
CGCGCCCCGAGGACAGGCAACCTACTGTAGCTGCCACCTAGGGCTGAAGC
GCACGCTCCCCAGCCACCTGCCTACGGCTGCTGCCACTGAAAGCAACCCC
GCCCTCCCCAGTAGCAGGGCCGCAGTGCGGCCGCTGCTACCCCCACCCGA
GCATTCTGCCGGGGGCCTGGGGATCACCCCGCCCTGCCTACCACAGCCGG
CGCCTGCACGCACCACNGGGGGCCTGAGGACAGGCCCGCCCGGCCTGGCT
CCACCACCNCCAGTGCCCGAGCACGCCGTCCGGGGGCCTGGGGATCGCCC
AGCCCAGTCCACCACCATTGGCACCTGAGCACTCCTCCCAGGGGCCTGAG
GTCGGGCCCACCCAACCTGCCGCTACCACCACAGCTGGCACCCACCCGCA
CGTGCCACCTGCGGGCCTGGGGACTGGCCCGCCCAGCCCATCGCAGCCAC
CAACACCAGCGCAGACCGCTTGGGAGCCAGAGGGTTGTCCCGCCACTGCT
ACTGCCATTGCCCATGCCACGCCCGCTGCCCAGGGGCCCGAGAACCCGCC
CACCCGCCTGGCCCACCGCTGCCACTNCCGGCACCCGAGCAAGCCACCTG
GAGGCCCAAGAATCGGCCCGCCTGGACCCGCTAACACCGGTGCCAGCGTA
CGCCGCCCTGGGGCCCAAGGACAGGCACGCTCGGCCCGCCGCTGCCACCA
CTGGGGCCCAAAGACTGGCCCACCTGGCGTCCCAGTCCCCAGCAAAACTT
CACCACAGCCTCCACTAACAACTGCACCCTAAGCCACTGAGGAAATCACA
GATACCACTGACGCTGTTTACAGCCGAAGAAATCATACAGAGACTACACT
ACTGCACGCACCCAGAATCAAAGCCAAAGTGCCCTACCCAACCAACACCA
TAGATACATCTTCAGGAAAAAGTCCTCCCCTACGAAAGCAAATTCAAAAA
ATTGGAAGAAGCGACTGTTACACCAGATGCGCAGATATCAACGTAAGGAC
ACAAGAAACATGAAAAAGCAAGGAAATATGACACCTCAAAAGAACACAAT
AATTCTCCAGCAACAGATCCCAATNAAAAAGAAANNATTTATGAAATCCC
GGAAAAANAATTCAA
>rnd-4_family-898#DNA/hAT-Charlie ( Recon Family Size = 36, Final Multiple Alignment Size = 33 )
TAGANCAGGGGTCCCCAACCCCCGGGCCACGGACCGGTACCGGTCT
>rnd-4_family-1835#LINE/L2 ( Recon Family Size = 36, Final Multiple Alignment Size = 32 )
TTCTTAAAGCAAGTAAATCANATCACGTCACTCCCCTGCTTAAAACCTTC
CAGTGGCTTCCTCCATCGCACTATTAGAATAAAATCCGCAATTCCTTATC
ATGGCTTCCAAGGCCCTNCATGATCTGATCCCTGNCTTCGTTTCCTCCTC
TCTCTCCCAGGCTCCAGTCACATCGCCTGTTCTGTTCCTCGAACACGCNA
AGCTCGTTCCCTGCCTCAGGGCCTTTGCACTTGCTGTTCCCTCTGCCTGG
AACGCTCTTCCCCCANATCTTTNCATGGCTGGCTCCCTCNCATCATTCAG
GTCTCAGCTCAAATGTCACCTCCTCAGAGAGGCCT
>rnd-4_family-118#LTR/ERVL ( Recon Family Size = 33, Final Multiple Alignment Size = 32 )
CTCATTGGCTGTGGTGGCTTTGTANTGTGTCAACTAAATGAACTACGTTT
CCCAGAATTCCCTTCCTGTATGTTTCCGGTTAGGGTTGGCCACAAGAGAN
ATTTTGCGCGAGATTTGGAAGGCGGAAGTGAAGCAGCAGCCATTGTTTTC
ACGCTCGGAAGTTCGGNGCAGGACTGTGTTAGCTCACGCATGTCGCTCTG
CTGCTGTCACCTGTCTTTGGCGCGGGGCAGCAGCCGGGCCTGCAGCTCCT
CCTCACCTCCCTGGATTCCTCCTTCAGCTTCTCCGACTCCTGGGCCAGCT
GTGCGGTTNNAGCTCCGTGACGAAGGGCGCCAGCTTCTTCTGCAGGTCAC
CCNCGTCGTCGAGGTCGGAGGCAGTGAGAGTTGCANACACGGGTTCCAGT
CTGTCCCTCATGGGTTCCAGCTTCTCNTGGGTTCCAGCTCGTCCTTGCTC
TCCCCTNAATNCATCTTTCTTTTTCCCGACTGCCTGCCCCGCGGACTTCA
AGCTCCAGCACCAGATGCAAAGACAACAGCCTTACANAGACTGCTTAACC
AGCTCCCACAATTGCGTAAGGTCAAATCCCTGTAACAAATCA
>rnd-4_family-100#LINE/L1 ( Recon Family Size = 40, Final Multiple Alignment Size = 32 )
TTAGGAAACAGCANTATTNAGGGGAAAGTAGACTTCCTGTGNTATAGTTG
GCATTCCACTTCCGGCAAAGTCGAATAGCTTATTNCGGATCAACCCTCCC
ACCGAGAGAACAACTAGAAAAGCTGGATTTNAAAACTNTATTTGAAGGCA
TCGGAGAGCTANCAAGGCAGCTGAAGAATTATGAGGGCCAAGATCCAGAG
AAAAGGGAAACGCACAGAGAGGTGAACCCAGTATTTGGCAGCTGTTTTCC
CCTCGAGGCATTTGCCGATTCGAAAACTGAAGTAACAGTTGGAGGCCGAG
AAGCTGAGCAGAGCTTTCGGCAGTCTCAGCGGGGCTGGGAGGACAAAAAT
TGGAGTTCAGGGCCCGCGANNGAGAAGGGAGCCCTGGTAAACANTCCCAG
CTTCCTTTGGATGAACCCTGGAAATAGATCAGCCCTCACAAGGACTGAAA
CCCAGCTTCGAATCANCTCAATCCCNGATTGGATTAAGGTGATCTGCCTC
TAGCTTATCCGCCTGCCAGAAGCAAAAGTAAATCCTCTCTGGAGGAAGAT
AACATCATCCAGAGCTTCGAATTATCTCTATAATTTTTTCATACACGATG
TCCGGCACTCAATCAAAAATAACCAGCNAGCCGAGGAGATANGACNAAAN
NNTGACCGAAAACCAAGAGAA
>rnd-4_family-77#LINE/L1 ( Recon Family Size = 35, Final Multiple Alignment Size = 32 )
TGCATAGAAAANNACTGGAAGGAAATACGCCAAAATGTTAACAGGTGGTT
ATCTCTGGGTGGTGGGATTATAGGTGATTTANTTTTCTTTTTGTACTTTT
CTGTATTTTCCAAATTTTCTACAATGAGCATGTATTACTTTTATAATCAG
AAAAAAAAAGTACAATGTTATTAAAAGTA
>rnd-4_family-2859#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 32 )
TGATCCAGGAGAGAATTAACTAAGAGTCTGGCACCTTTTAAGGTCTGATA
AGAAACATTTACCATCTATTCTCTCTGAAGCCTGCTACCTGTGAGGCTTC
ATCTGCATAATAAGAACCTTGGTCTCCACAACCCCTTATCTTAACCCAGA
CACTCCCTTCTATTGATTCCAGGTCTTTAGATATAACTCTTTCAACCAAT
TGCCAATCAGAAAATCTTTAAATCTACCTATAGCCTGGATGCANCCCTCC
CACACCCACCCCCACCCC
>rnd-4_family-457#LTR/ERVL ( Recon Family Size = 37, Final Multiple Alignment Size = 31 )
GGAGAAACCCCCACACATTTGGTCACAGAAGTCTTCTGTGTTGATTGCTT
GTGGTGGTGTGAGAGCAGAGGAAAACAGTTTGTTTTTAA
>rnd-4_family-859#DNA/TcMar-Tigger ( Recon Family Size = 37, Final Multiple Alignment Size = 31 )
AAGAGTATGGTGTTGGAATGACCACCATATATGACCTGAAGAAACAGAAG
GATAAACTGTTGAAGTTCTATGCTGAAAGTGATGAACAGAGTTACATGAA
AAATGGGAAAGAACATCATAAAGCTAAAAATGAAGATCTCGATTGTGTAT
TGAAAGAATGGGTCAGCGTCACAGTGAACACATGCCACTTAATCTGGGAT
GCTGATCACGAAACAAGCAAAGATCTATCACAATGAACCGAAAATTAAAG
GGAACTGTGAATATTCAACAGGCTGGTTGCAGAAATTTAAGAAAAGACAC
GGCAATTTTTAAAGATTTGTGGTGATAAANCATCTGCTGATCATAAAGCA
GCAGAGAAATTTATTGACGAGTTTGCCAAGGTCATCGCTGGTGAAAATCT
GATGCCAGAACAAGTCTATAATGCTGATGAAACATCACTGTTTTGGCGTT
ATTGCCCCAGAAAGACACTGACTACAGCTGATGAGACAGCCCCTACAGGA
ATTAAGGATGCCAGGGACAGAATAACTGCGCTGGGATGTGCTAATGCAGC
AGGCACGCGTAAGTGTAAACTTGCTGTGATAGGCAAAAGCTTGCGTCCTC
CCCGTTTTCAAGGAGTGAATTTCCTACCGGTTCGTTATTATGCTAACAGA
AAGGCGTGGATCACCAGGGACATCTTTTCTGACTGGTTTCACAAACATCT
TGTACCAGCGNCTCGCGCTCACTGCAGGGAAGCTGGACTGGATGACGACT
GCAAGATTTTGTTATTCCTTGACAACTGTTCTGCTCATCCTCCAGCTAAA
ATTCTCATNAAAAATAATGTTTATGCCATGCACTTTCCCNNAAATATGAC
TTCACTAATTCAGCCACGTGACCGGGTATCCTTAGATCAATGAAGAGTAA
ATATAAAAACACTTTCTTNAACAGCATGCTAGCAGCAGTGAACAGAGGCG
GGGGTGTGGAAGGTTTTCGAAAGGAGTTTGGCATGAAGGATGCTGTATAC
GCTGTTGCCAACGCTTGGAACACAGTGACTAAAGACACGGTTGTGCACGC
CCGGCACAGCCTCTNGCCTGCGNCCATGTTCAGTGATGATGAACGAGGCG
GTGACTCGGAAGGATTCCATATGTCAAGTGAGAAAANATGATGTCTGACC
TCCTTACGTATGCAAAAAATATACCTTCAGTGTCCATCANTAAATTGGAA
GAAGTGGATATCGAAGAAGTTTCTAACATTGATAATGAGGCTTCAGTTGT
TCATTCATTGACTGATGGTGAAATAGAATGAAATGGCTCTGAATCTGTAT
AGCNNNGTGATGCGTAACAGCGATGATGAANGTGACGGTTGTTAACACTG
CAGGAAAAAGTGCCTATAGACGACATGGTGAAAATGTGTGATGGGCTTAT
TGAAGGACTAGAGCGGCGTGCATTCATAACAGAACAAGAAATCATGTCAG
TTTATGAAATCAAAGAGAGACTTCTAAGACAAAAACCGTGTTAATGAGGC
AGATGACTCTGGAGGAAACATTTAAAAAAGCCATCCAGCAGAATGCCTCC
TCATCCCTAGAGGACCCACTTCCTGGTCCCTCAACTGCTTCTGATGTTTC
TTCTCACCTAAAAAAAAAATATACAGTGTACAGTAACCTTTTAATCAAAA
CACAGCATCGTAGGTGGAGANCTGAAAGCCTGCCATTGTTTGTTGTTGCT
GTTGTTTAACAGCTGATACAGGTATTCTGGTGATGCTACTGTGCTGCTTA
GTTACCCTGAACACATTATTTTTTCACTGTATTAATGGTATGTCATATTT
TTTACTGTTAAGTACTTATGTGTGAATAAGTGTAAGAAAATGATTGCTTA
TCGGTAGCATATAAAATTCAGAGTCAGGAATGATGGTGATGCCAAACAAC
CGCAGATTGTCCACATGGGTGGCTGAGATAGTGACACCTTTGCTTTCTGA
TGGTTCAATGTACA
>rnd-4_family-1214#LINE/L1 ( Recon Family Size = 34, Final Multiple Alignment Size = 31 )
TTAACAACTGATACACGCNACAACCTGGATGAATCTCAAGANAATTATGC
TGAGTGAAAAAAGCCAGCCTCAAAAGNTTACATACTGTATGATTCCATTT
ATATAAAATTCTNGAAANTGCAAACTAATCTATAGCGATAGAAAGCAGAT
TGCCTGGGTACAGGGAGTGGGAGGATGTAGTGGGCAGGAAGGATT
>rnd-4_family-128#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
TAGCTAGCCTAGAGTTAGAACCTGTACANCGCCATTTTATAAAAGACAAA
ACTGTTTCCATTCTCCTCACAANGACTGCTAACCTTGGCTTCTGTAAACT
GCTAGATTATTTGCAGGATGCAAAGAGGTAAAGCTGCATACCTTCTCTTA
TCGTAACTGCCAGAATTGCTGGCCTTTGTTTCCCAGAGTAAGCACCCCCA
GATAATTCCATCCTGGCGC
>rnd-4_family-2549#DNA/PiggyBac ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
ATTTATGCCTAGTGTTCCATTATTGGAACGCTAAGCATGTGGGAGTTATT
TATATCCTACTGCTCAAGGTCATCGCCAAGGTCTGATTGCAAAAATTCAA
AAAATTGCAACCTCCGGCATAAATGG
>rnd-4_family-337#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 30 )
AAAGCAAACTAAATATGGCCTGAGAAGGACTCCGTACTTCTATATTTGAG
TCCTTGTGGACGAACTGCAACCTAACTTAGTAGGCAGACAAGATTGAAAA
CCTAACTTAGGAGTATGTNCCTGTAACAATAG
>rnd-4_family-365#LTR/ERVL ( Recon Family Size = 35, Final Multiple Alignment Size = 30 )
TCAACCTGCGACAGCTGGTACCAGGAGTGGTCTGAGAAAGCAGACGCTAA
GATGGGATTTTGGAGCTGGATCACCCGCCGNCCGGCTGGCAATGAGGACC
CCATCGCTGGTGGTAGGTGGAGCACAGATAGCCCTGGCATANNGTAGCAG
TGCAATTGTTAAATCTTTCACCGGTGGTGAACTGGGATGGGATNCCGGTG
GAAGGAAATGCACTAGCAGGTGCAATGTATCAGGCATTTANAAGGGGGAA
ATAGTACTTAAGGACAATGGAATTGGGTGGCTGTTGCTNAGCGCGACTGA
TGCTCTGGAGAAAGAAANGATGAAAGAGCTGAGNGCGATTAATCANCAAT
TAAAAGCTAAGTGTGAAAGCCAGAGGGCCTCCTTGGTAGCATATAAAGAG
ACTCTCATCTCCTGCAGCCAAATGAAGAGAAGGCAGAGAAAGCTGAGGCA
AATTGGGCTCAGAGANGGTTAATTCTCAACCGGNCAGCTGAGGTCTGCTA
TGCCAAGGTCAGGGCCCTGGCTGGGAAGGAATGGGACCCTAANACNTGGG
ATGGGGATATCTGGGNTGATGCACTCGAAAATCTTGAANCCCCAGATTCC
CCTGAACCCTCTGAGCCTGCAGAAGTNTCACTCCTCCCGATGGGCTAGCG
CTTGTCCCTCTTGAAGACGATGCAGAGGCCTCTGCCTTGCAAGACAGCAT
NTGCCCCCTTCAGGATCTACCCCCACCTCCTCTNCTNGCCNGCGCCAGAC
NAATAACTAGGGTCAAGTCACAACATAACCTAGCCGGAGANGTGCTGAGC
CTGCTAAGAGAGGAAAGGNACTATACNCTAAAGGAGCTGCAGGACCTNAC
TCAACGTGTGCCACGGCAGGAACCGGGAGAGTACGNATGGGACTGGATCC
TGAAGGTGCTGGATCAAGGGAGCAGAACATAAAGCTGGANAAGGGAGAGT

>rnd-4_family-4387#LTR/ERV1 ( Recon Family Size = 37, Final Multiple Alignment Size = 29 )
AGACAGCCAGGTGGGAAGGGGTCCCCGGAGAACTCCAACCGGCCTGCGCA
CTGGGAGGACGGGGTGGAGCCTCGGGAAGTTCACGCCGTTTGCAGCGGGG
AGGAGCCTGGCCCCTCCTGTTCCTGNGTGGNACCTGGGATTCAATCTGTG
AGGCGGGAAGCCTGCTAGCAGGACTCTCGCTTTGCTGAGAGAGTCCCTGT
TTCCCCTTTTTCCTTTTCGCCCAATAAATCCCGCTTTNCTCACCCTTCAA
AGTGTCTGCGAGCCTAANTTTTCNTGGCCGTGTGACAAGAACCCNGTCTT
TAGCTGAACTAAGGAGAAAGTCCTGCA
>rnd-4_family-2704#DNA/hAT-Charlie ( Recon Family Size = 31, Final Multiple Alignment Size = 29 )
TTAGAGCAGGGGTCCCCAANCCCCGGGCCACGGACCGGTACCGGTCCATG
GCCTGTTAGGAACCGGGCCGCACAGCAGGAGGTGAGCGGCAGGCGAGCGA
GCGAAGCTTCATCTGTATTTACAGCCGCTCCCCATCT
>rnd-4_family-592#LTR/ERVK ( Recon Family Size = 31, Final Multiple Alignment Size = 29 )
CTGAGTGTATGATAGANTATATTGTTTGCTGAGAACGACGGCAAGGAAAA
CCTAGCCGCGCCCCCAAGCAGAAAACTGCTCGGGGCATTCTAAAGTAGCA
AGACAGTATATGNATATCATACACCGGTTAAAACAGTTCTTTAAGCGCGG
GATATGTGACCCTGCCCCCGTGGCTCCCTCGTGGAGAATACTTTTTAGTT
TGTCTNTGATCAGTGGTAAGCGGGCACCAGCTGCCTACTTGGTNTATCTT
TGTTCTATGAGAAAATACAGAACACCTGTTTGTTAATAATAATCACCTGT
TCAGAGAGAATAAATGCGTGGGTCAGAGTCTGCTCGAGGCCTTCAGCCCG
GAATGCTGTCAGCCCCTGAGGCTCTCAGCTCGGAAGGCTGTTGGCCCCCC
GGATAGNCCCACTTTGCTGTTCTATCTGGGTGTCTGCTTCTCAATTCCTT
CAGCGCCGCCTGGGTGGGGGTCTCCACGGCCGAGCTGGTCT
>rnd-4_family-64#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 29 )
TGTAACCGAGCGGCTTAGCCTCAAAATGCATTTTGAAACANTTTTTTAGA
AACTTTTTTTCCTTTCTTGATTTCGGCCTTGAAATAACTTTGTTTCCCTC
CCTTCCCACCAGACACTCCCTTACACGTGCAAGTTTATCTAACTATGTGC
TTGCTTAGAAGTTCCAGGGGCTAATCTTGAAACAAACCAGGCATGGAGAC
CCAGCTGCAGAATTCCAGAGATTACCTCGAGGCAGTTAGTCTACAACCTG
GCCGCGGTCGAGATGACGCCAGCNCGGACCTCCGACGGGTGATAACCCAA
GATAGCCACCGGAACAAGACACGCAGACCTTGCACCCNCTCGCATCACCC
CACTGCATGCCTCCCATACCAAGTTCCCCTTTTTAAACCCCTCTCTCCGG
CCCAAAAGTTGAAGTGGTCTTTTNAAGGCATGGGCCTGGCCATTCTCCTN
ACTGCTAGCTTTGGAATAAAAGTCACTTTCCTTCTACCAGACCTCGTTCT
TGTTAATTNGACTCTGCAAGCGGCGAGCGGCTGAACT
>rnd-4_family-1066#LTR/ERV1 ( Recon Family Size = 39, Final Multiple Alignment Size = 29 )
AACCTGGAGAAACGTCCTCTCAGGGGAGCTGAGGGCACCCTGAACCCCTG
AACCCCAAT
>rnd-4_family-1494#DNA/TcMar-Tigger ( Recon Family Size = 33, Final Multiple Alignment Size = 29 )
TCTCCCACCAGTTGAGCTGTATGCTTACCAAGAGTCAGTTGTGTTTGTTC
CCAAACCTGTTTATGCCAGTTGTACTTGTTATTGTAATTATGTAATTTAA
TTAAATATTATATAAACCGATGAAATATAAGTGCAGGAAGAAAAAGTTGT
TGTCTTTCTATGAAAACTAAGTTGAATGCTTTGGAAAGACTTAATAAAGA
CAAGTTACTAAAAAANATTGCTGTCAAATTAGGTAGCAATGGAGGGAGAC
AATGTAAAAGATTGGGGAAAAGCATTGAGNATCTAAAAGGACTCTGCACT
CAGACTGCTTCGCAAGTATTTTAAGTTCTCGCTCTAAAGAAACTNAAACT
GGAAATCATAGACGANNCANTACAGGGCGTGGTTTATGCAAGAAAGACGN
CACGGAACTCCAATTAGCGGACCCACACTCAAAGAAAAGNCTTGGCCNTA
CGTCAAAAGTGGNAAATAAATGTACATTTATATGTTTTAAGTTAAAATGT
TTAAGTCANTGAAGGT
>rnd-4_family-495#LTR/ERVL ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
GTCTGACTCCATTTTTGATGTTTGACTGCTGACAGCTTTCAAGCCCCACC
CCTTCCCCCTTCCCCTTCTGCCCCACATCTGGGCAAGCTGATAAGAAAGC
CCGGGTGCTCCCTCCTTTGGCGCCGGCGGGAAGTTCAAACCACCAAGCCC
TGCTCGCGCGCGGGAACCCTCACCCCAGCCCCACCCCTAACCACCATAAA
ANACCCCTTTTCCTGAAGCCAGTCTCCTTTCCCTGCTCTCTCCAGAAAGC
CTCATTATGTGAGTAATAAACCTTTTCATACCCTCTTGGTGCGTGTGTGG
CGTCATCAGTCTCGACATCCGAACCAATTTTGGGTGGAGGGTCCATCCTN
CTTCTGCAGAGTGACCAC
>rnd-4_family-1582#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
TGTGAACGTGTGGGGGCAGGGGGTATATGGGAANTCTCTGTACTTTCCGC
TCAGTTTTGCTGTGAACCTAAAACTGCTCTAAAAAAATNAAGTCTNTTAA
AAAAAATTAACAGATGAA
>rnd-4_family-1832#LINE/L2 ( Recon Family Size = 41, Final Multiple Alignment Size = 28 )
CCAAGGCCCTCCATGAGCTTTGACCCCCTGTCCCTTCCTGCTTCGGTTNT
TCCGTTTCCNCCAACGTCTNTCCTTTCTTTTCTCCTGAAACAGACCAAGC
TTGTTCCGNCCTCAGGAATTTGACGCTTACGNCTTCTACTTAGACTTGTG
CATGCCTGGCTCCTTCTCATCATTCAGGNCTCAGCTCAAATGTCACCTCC
TCAGAGAAGCCTTCCCTGACTACC
>rnd-4_family-284#LINE/L1 ( Recon Family Size = 32, Final Multiple Alignment Size = 28 )
TTTTCATTCGTTTCAAGAGCGTTCGCCCTTATATCTTGGAGCATTTTTAT
AATAGCTGCTTTAAGNCTTTCAGAATCCGCATCATTTCGGCATTGGTGTT
TTTNCTGTCTTTTCCCANGTGAGTTGAGATTTTCCTGGTTCTTCATATGT
CGAGTGAATTTGGGATATCAAGTATCTNGGCTTTAAATCCTATGGAGAAT
GTTGATATTTTTGTTTTAGCAGGCAATCAACCCGGTTGGGTTCAGGCCAC
AAGTTCCAACCNGCCTTCTGTGGNCTGCGGTTTCAGTGTCAGTTCNGTTT
TCAGAGCCTTTGCAGTGCTATTCGGATCTGTCCCGCGTGTGCGCCACCCA
GCGGCCAGTCTGGGACTTGGCGATGGTCTACGTCATAGTTCAGTTCTCAA
AGCCTTTGCTATATGTTTAGGNTAGATCCATGCATGTACAACTTNGGGGT
GAGCCCAGGANTTCATANACAACTTTATGGGGTCGCTTTCCCGAGCTCCT
TCCTCTCTGTGATCTCCCTGGTACTTTCCAGTTCCCTAGGGCTCCTCNTT
TTGGTTCTCTGGCCAGAAAGCTGGAGCTTTANTTNCCCCGCTCTGCCGCA
CACTTCTCACGACTGTNCGNGTATTTGTGACCAAGGGAGGACAGAGAGAA
AAACAGGCAATAGGGTTTGCCCCACCTTCTTGAGACCACAGCCTCTGATC
GGAGAGGATTCCTCCCTCAGAGTTTCAGGTGCCTGCGGCCCTCGCTGNCA
CTGTTNTTGCTGCCACTGCAACGGGGAATTGCNTGGGGTCTGGGGCCAGA
TAACCGAGAAGAAAAAAGGAAAAGAAAACCAGGGGATTTCCCCNACTNTC
TCTGTAGCGTTAGAAGTCCTCCCTTTCCCTTCGCTCCTTAAGCCAGAAAC
TANAGAGCTTTTCCTCTGGAGCTCTGTCTGTNCNACCGGTGCTTGCAGTT
CCGGGTTTCGGGCTGCCTTGAGTCCAGGCTGGGAGAGAGCGGAGAANAAA
TGGNAAANTCGCCGCCGGTTAGTCGGTACTTCGAATTCTGTCTTCTTCCC
CAATCTGCCTGCTACTATTTACTTTTCAGAGTCCTCAAATAGCTGCTCCA
TGCATTCTGTCCAGGTTTTATAGTTGTATTCAGTGGGAGACGCGGAGTGG
AGTGTGCTTACTCCATCNTANCCGGAACTGCCTATTTTAAANATTNATTT
TC
>rnd-4_family-913#LTR/ERV1 ( Recon Family Size = 35, Final Multiple Alignment Size = 28 )
CACTAGGCTTTCTTTCCTAAGGGCTAAACAGAAACCAGCCCTTTCGAAAG
ACTCCAACCGCTGATATCAACCAACTGCCTGACACCGCCGCTNNGCGCCC
CTCCCTTTTCGCGGTTTCGACACAACNACTGACCAGCNTTCCTTCCTGAT
AAGAGACCACCGACCACGGACTGGTTCTGGCCAGTTTACAGAGGCTGCGC
ANTGAGTGCCTTCGTGTCCTCTGCTTCACCTTTTGACGTCAGAGGGCCGA
AANAACTCCACCCTCGGTTNNCATGCTAATGCCGCCATTTCANTGAACAT
GGGNCCCATGAAGANGCATGNAGCTCAACTGCGCATGTGCACGTTTCTCC
TTTCATGAATATTCATGGCTCCTCCTATAGCCTGTTGAATATGTATATTT
AGCCANCCCGCTCAGCATAAATTCCCGTTCTACCTTTGCCCCCTCCCTCG
AAGTGCCTGTTTCTGGCTTCTGGCCGGAGGCTACGCTTCCCAGCCTGTCA
GGATGGCCACCCTGCAGGCTGCAACCCTTTATGAGAAATAAAGCTCTCCT
TTCCAAATTTATGAACCTCGTGATTCTTCAGTTGACA
>rnd-4_family-170#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 28 )
CTGCTGAAAACTAAAGACGAAAACNAAATCCCAAAAACAGAGTGNGAAGT
GGAGAAAAGACANATTACCTTCAAANAGCAACAGATAAGACTGACAGCCG
ACTTTTCAACAGAAACAATGGAAGCCAGAGACGATGGAATGATATTTTCA
AAGTGCTGANAGAAAATAACTGCCAACCTAGAATTCTATATCCAGNAAAA
ATATCCTTCAAAAATGAAAGGTAAAAAGACTTTTAATAAAAAAAGTAAGA
AAGAATTTNTCACCAGCAGATCCGCACTAAAGGAAATTCACACTTCAGGC
AGAAGGAAAATGATNCCAGATGGAAGCTCGGAGATGCAGGAAGGAATGAA
GAGACAGAAAAAGTAAATGTAGGTAAATCTAAATAAATATTGACTGTATA
AAACAATAATAATAAGAATTATGTCTCGCGGGGCANTTAAAATATANATN
GAAAATATATAAGGACATGTAAGTTGAAATTAAAGTATTCAAGATCTTGC
ATCGTCCGGGAAGTGGTAAAAGTACTAATTTANANTAGACTNTAATAAGT
CAAGGATACATGTTGTAATCTCTAGGGTAACCACTAAAAGAATTAANAAA
GAATGTCANCTAACAAGCTAATAGAGGGGAAAATGGAATAATAAAAAAAT
TCAATCAAAAAGAAGGCAAA
>rnd-4_family-486#Simple_repeat ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
CCCTCCCTTCCTGCCTTCCTCCCTTCCTCCCCCCCCCAAAAAAAAAG
>rnd-4_family-4317#LTR/ERVK ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
GCTGGTGCCCCCGTGTGAGGANCGCTGCAATGGATCATGATGGAACCCTT
GAAAACGAAGGTGAAGAGACTGCACAGTCAAGTAAGTCAGTAAGTCATTG
GTACCCGCTTGGGATTTCCAAGTTCGAGGGAATTGTTCANGCTAGGGTTT
CATCATGGGACAACAGTTATCAGCACAACAGAAACAGTATATAAAAGTAT
TGAAACGGCTACTTAAAGCTAGTGGAGCCTCAGTTTCGCAGGCTCAATTA
AGGGACCTAATGCAAACNGTTGTTTCCCGTAACCCATGGTTCCCAGAAGA
AGGCACGCTAGACGTAGAGCTCTGGGAACAAGTGGGGAGAAATCTTAAAC
AATATCATGCACAAGGGCAACGGATCCCAGTAACATNTCTAACGTTATGG
GCCTTAGTTAGGGCTGCTCTGGCCCGCTATACACAGAAGGCCTAAAAAGG
GAAGGGAGGAGGAANCGTCACCTACCTTACCGCCTCCTCCNTCTCCCTCA
GCCCCACCATTACCAGGTAAAAGTGCCANAGAGGAAACAGAGATTCTCCC
TGAGCCCCCTCCCCCAGTAAATTGGAAAAAAAGACAAGGGATATGCTACA
GCTATGGGANCCTGTCTTAGGCGAGCGGCGTTAGAAGGGGAGCTCTTGGC
CTGCCCGGTAATGCAAGATCGACAAGGCAATCAGGTATATGAACCCATTT
CTTTTGACGCTTATAAAGAGATAAGAAAAAGCATTAGAGAAAATGGAGCC
GCTAGCCCATTTACGAAAGGATTAATTGAGGCCATAGCAGACAACTTCCG
TATGACCCCGTGGGACTGGTCAGTGCTAGCTAAAACAACTTTAGATGCCA
GTCAGTACCTCCTCTGGAGGGCAGAATTTGATGAATTATGTGAACAGCAA
ACCCCTTTCTAATAATGGCCACTGTTATTNCTCCCCTACCCTGATGTGGC
TCTCTCAAAATCCTATTTGGGTAGAACAGTGGCCTTTAAAGGGAGAGAAA
TTACAAGCCGATGAATTAGTNGAGGAGCAATTAAAAGCCGGCCATATAGA
ACCATCTAACAGCCCTTGGAATTTGCCCATTTTCGTCGTCCCCAAAAGGT
CTGGCAAATGGAGACTTTTGCATGACTTACGGGCTATTAACGCTAATCTG
CAACCTATGGGGCCTCTTCAGCTGGGGNTCCCTTCCCCCGCGGCAATTCC
TCGAGATTGGCCTATAGTCGTTATTGACTTAAAAGACTGCTTTCATACTA
TTTCCCTTGCAGAACAGGACANAGAAAAATTTGCGTTTACAATACCAGCT
ATCAATAATGAAAGGCCGGCTCGCCGATTTCATTGGAAAGTGCTTCCTCA
AGGAATGCTGAACAGTCCTACCATGTGTCAGTATCATGTAAATCAGGCTT
TNCTCCCCAGTAGAAAAAATTTCCTAATTNCAAGATTATTCATTTTATGG
ATGATATTTTACTGGCAGCCCCAACGGAGCCAGTACTTTNAAGTTTATAT
GCCTCTGTCCAAAGGAATACACAGTTAAGAGGTTTAATCATAGCACCTGA
AAAAGTACAAATNTCCTCTCCTTGGAAATATCTTAGATACATACTAACTT
CCTGGTCAGTAAGACCTCAAAAGGTTAAATTAAATACTAGCAACTTACAT
ACCTTAAATGATTATCAAAAATTACTGGGCGATATTAATTGGCTTCGTCC
CGCCTTGGGCATAACTACTGATAAGTTGCAAAACCTGTTTTTTATCTTAA
AAGGCAATGCGTCCTAGATTCTCCCAGGTATTTAACCCCTGCAGCAAAAA
NGGAAATTGGGAAATAGAGCAAGCTATTTCTCAGAGGCAACTAGATCGCA
TAGACCCANAATATTCAGTTCAATTGTTTNTTTTTCCTACTAAACATTCC
CCAACAAGATTAATAGGACAGATGGCCCCAGGGCTGTGNTTCCTAGAATG
GGTTTTTTGCTCACATACCAGGACTAAAACACTATCTCCCTATATCCAGC
TAGTTAGTAAAGTCATCTATACGGGCCGCAGATGATGCAGTCAGTTGCTA
GGTTATGACCCTGATATCGTAAGAATTCCCTTGAGTAAAAAGCAATTCGA
AGCAGTCTTGCCCCTCCCTAGATCTTCAGAGCACCCTCTGATTATGCAGG
CCATATAGAGCATGCCCTTCCCGCTGACAAACTACTTCAGTTCTTATCTC
ATACTCCTGTGGTTATTCTACAAAAGTAGTTCACTCCCCCATACCTAACG
CTTTAACGCTNTTTACTGATAGCTCTGGTAAAAATGGAAAAGCGGCTATT
TGGTGGGAACCGCATAATTCCNTCACCCAATCTGAATTTACTAGTACTCA
GAGAGCTGAGGTTGGAGCCTTAATACTGGCCTNGAAACCNTTTCCGCTCA
GCCTATCAATATTGTTAGTGACTCTGCTTACTCAGTTTATTTATTGCAAA
ACCTTGAAACAGCCCTNATTAAGTCTACTCTCGAGCCCACCCTGTGTGCC
CTTTTTCTTCGACTTCAGCAATTGCTAGATCATGAACGCATCCTATTTTT
ATCACACGTATTTGAGCCNACAGCTCGCTGCCTGGCCCACTGGCTTATGG
CAATGATCAAGCAGACCTGCAGGTTATGACATCACTGCTTGACCAAGCTA
CCCAATCGCATCAATTTTTCCACCANAATTGGAGAAACTTAACTAAACAA
TTTCAACTTACNCAAAGACTAGCTAAACAAATTATCCCGCAATGCCCAGA
TTGCCAGCTCACAGGCNTGTCTCCTCCTTNTACAGGCGTTAACCCTAGAG
GACTGGAACCTAATCAGTTATGGCAAACGGATGTTACACACGTCCCTGAA
TTTGGAAAACTAAGATATGTACACGTATCCGTCGATACCAATTCTCACCT
AATTAGCACACATGCTCTTCCTGGAGAGTCCGCCCAATATGTTATTAAAC
GTCTTCTCTTAACCTTTGCGTTTATGGGGCGGCCCACAAGAATTAAAACT
GATAATGGTCCGGCTTATGCCAGCTCACAACTTCAACAATTTTGTCACAC
GTGGAACATCCAACATTCCACAGGCATCCCGTACAACCCCCAAGAACAGG
CCATAGTAGAACGTGCCCACTCCACCCTTAAAAATATGCTCAGAAAACAA
AAAAAGAGGGGGAATATGAGTAAGGACCCTGCAACACTACTAGCACAAGC
CTTATTTACCCTTAATTTCTTAAATTTAGATGACAAATTTCAATCAGCTA
TAGAAAAGCGCTTTGCTAAAACCTCTCAAGACATAAAACNCGCAGTTTTA
TGGAAAGATGTAAATAGTAATGNACGGTGTGGTCCAAATGANTTGCTAAC
ATGGGGAAGAAGGATATGCTTGTGTTCGCACCCCCTCAGGTCCTCTTTGG
ATTCCAGCACAATGCATCAAACCATACCATGGTGTGGCTGGGACCCAACC
CGGTACCAGAGATGAAGAAAATGANCCTGCAGGACCCACAGCCCCGGACG
ATGCAGCTTCCTCAGATGACACAAGCCCCAGACATTACCTGGGGAATGCT
GAAGAAGACAACTCAGGAGGCTGAGCGAATCCTGCTCCAGACACAGACAC
CATTCACTCCAGATAATTTGTTCCTTGCTATGCTCTCTGTTGTACATTGC
ACACTCTCGTAGGGTATTGACCTTTTTATTCTCTCACTTCGCCTGCNACC
TGTACCTGCCACACTCTATTGAGCCCATCTTCTAAATCTGCCTTTTTTTC
TCCCTGTTACNCGGGCAGACACCCCCTTCCCAGCCTCTAACAACGTNACT
GCTTGGCTAGGAGGAATTGACATACNCCCAGTGGGGTTCCTTAGTAATGG
CACACATTGGACTGAGGTGCCAAGTAACACTACATGTCACTCCNTGATNG
GAAAAATGTTACTAATTATACTCATGTTTGTCTTATGTTATTTACTAATT
CTAGGATGCAAAGCCGGAACACGACTTATAACCGCTGCACCTGACAAACC
TGTTGCTGCACACATNTGTACTCTTCAATAAACAAAACGTGATGCAAAAA
AANAAAANCAGAAAAGGGGG
>rnd-4_family-1709#LTR/ERVL ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
CCGTCCCCAAAGAGAGAATTCTTCCTGCCTGACTGCCTTTGAGCTGGGAC
ATCGGCTTTTTTCCTGCCTTCGGACTCGAACTGAAACATCGGCTCTTCCT
GGGTCTCGAGCCTNCCGGCCTTCGGACTGGAACTATACCATCGGCTCTCC
TGGTTCT
>rnd-4_family-575#LINE/L1 ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
AGTTATTGTTTAATGGGTACAGAGTTTCAGTTTCGCAAGATGAAAAGTTC
TGGAGATGGATGGTGGTGACGGTTGCACAACANNNNNACTGATGTACACT
TAACTAAAAATGGTTAAATGGTAAATTTTATGTTATGTATATTTTACCAC
AATTTTTAGAAAG
>rnd-4_family-1012#DNA/hAT-Charlie ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
ATGACAGTCTTAGGGCCATGGTTCCCAAACTGTGGGCCGAAGGTGCCCCA
GGGCGCCGCAGCAAACTCACAGGGGTAGTGCTGAGGATATTTTAAATTTT
CGAGGGAAACACAGNGATACTCAACATCTGTCGGACACCGTGCGAACTAC
TAGCTCGAGGTAGTTCACAGTTTCAACATTAGATACTACATTCCTTTCGA
TGATGTCATATCTTCCAGGCTTGATAAAAAGCAAGTACCACGTGAAAATC
AATGTGGAACAGGAAATGAGGGTGGCGNTGTCCAATCTGATTCCAAGTTT
GAGAAGCTGTGCAGTGCCCAGTAGGTACACACATCCCGTTAGTAAGTAAT
TGTGGTTAAGAATGAAATAAGGCAGTCTCTCTGAGCNTNCTCTGGCTTGG
GAGGNTGCCCTAAAANAGANAGAAAGAATGAAATNAAAATATTACTTTTC
TTTCAATTTATGTGTATTATTCTTTTCAAACGGCTACTAAGTTGTTAGAA
CATAAATACTTATTAAGTTGTTTGGACCTAANTACTTAATAAANAGAACT
GTTAGGTATTTCTTTTGGCCTGNGGGCACTGGGAAAAAATTACTGAGACA
CTAAGGGCATCGTGAACNGAGAA
>rnd-4_family-134#DNA/hAT-Charlie ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
TACCAAGGGGGCNAAAATTGGTTCTGGTGGAGAGGGTAAAAAANTCTTAC
TCCTTCTTATGTATAAAGCACAGATATACATACAGTACATAAACAGATAT
ACAGTATATCTGTGGTATTAAAATTTCATGGGAAAGGGGCGGATTAGAAA
AAATGTCTAAAAAGGCTCCTTAGGGGGGCGATAATGAAAAAAGGTTGAGA
AACACTGNTCTAACTCATAAATGGCACAATTCNAATTCANNACTGGGTTT
TGCAAGGAGAAACT
>rnd-4_family-280#Simple_repeat ( Recon Family Size = 28, Final Multiple Alignment Size = 27 )
AGGTGGGTGGATGAGTGGATGGATGGATAGATGGATGGATGGATGGATGG
ATGGATGGATGGATGGACGGATAGATGGATAGATGGGTGGGTGGATGGAT
GGATGGATGGATGGATGNANNGACGGATGANTGAAGGTGGATGGACGGGT
GGATGGATAGATGGATGGATGGACAGATGACGGGTGGACGAGANATGAAT
GGATGGATGGGTGGGTGGATGGGTGGATGGATGGATGGAAAGANAATGGG
TAGACAGNGGGGAGATGGATAGGTGGGTGGGTGGATGGGTGGATGGATGG
ATGGACGGATGGATAGATGGATGGATGGACAGGCAGATGGATGGGTAGAT
GGGTGGATGGATGGATGGATGGACGGNTGGATGGGGGACGAGGNGAGGGG
GGTGGACAGATGGNGGATGGATGGATGGATGGATGGAAGGACAGGNGGAT
GGATGACGGATGGGTGAGCGGGAAGATGGGTGGATGGATGGGTGGATGGA
CGGAGGAAGGATAGACGGATGGACGGGCGGGCGGATGGATAGATGGGTGG
ATGGATGGATGGATGGATGGATGGACGGAAGATAGATAGACAGATGGATA
GAAGGANGGATGGACGAACGGATGGATGGACGGATGGANGGATGGGTGTC
AGGCGGAGA
>rnd-4_family-159#LTR/ERV1 ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
GGGACACCTTGTAAGAGACTGCTGTCCTACCTTCCGCACCCCCGCNAACA
CCCCCAAGCATGGAAATAAAGGAAAATCTTGAGTTCCTTCAAGGGAAATT
CCAGGCACCTAGCTAGCCCTGAGAAGTAAATGAGCAACTTGATAAGCAAG
AAGGTAATAGTAGCTTAAAACAATAGCCAAGGAAGTTAGAGTCNCGGGAT
GTTCCCTAGAAACTAAAGATAACGTCTTAACATATGTCCCTGAGTTGTTT
TTCAGAAACCCAGACCCCCACCAAATGGATCCGCTGGCACGCAGACCTCA
GATAAGGGGGAACTGAGGACTGAACTCTGACCACCGTTCTTTGTTCTAAA
TTTCTTCCTGAGGGGCCTGGAGGAAGTCACACCCACGAGCCAGAGCTAAC
ATTCCTTTCTGCTGACCCCAAATTTTTAGACAAAGCTTCACTTCCTTAAC
CAATTGCAAATCAGAAAATCTTTGAATCTACCTATGACCTGTAAGCCCCC
GCTTCAAGATATCCCGCCCTTTTAGGCCAAACCAATGTATAACCTCATGT
ATTGATTTATGACTTTGCCTGTAACTTCTGCTTCCCTGCCTTTAAAAACC
CTTACCTGTAAGCCATCGGGGAGGTCGGGNCTTAAGCGTTAGCTGCCCGA
TTCTCCTTGCTTGGCGCCCTGCAAATAAACGCCTTCCTTTCTCCCGCTGC
AANCCCGGTGTCGGTGTCTGGCCTTACTGCGCCGGGCGAGCGGACCCCAG
TTCGGTTCGGTA
>rnd-4_family-9009#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
CTCCCNAGTTCCTGTTTTCCCGCACTACATTTCTTCCCTGCTANATAAAC
CCCCAATTTTAGTCGGTCAGGGAGATGGATTTGAGACTGATCTCCCGTCT
CCTCGGCTGCAGCACCCGATTAAAGCCTTCTTCCCTGGCAATACTCGTCG
TCTCAGTGATTGGCTTTCTGTGCGGCGAGCAGCAGGACCTAGACCGAACC
CCTGGTGTTTCGGTAAC
>rnd-4_family-2204#DNA/TcMar-Mariner ( Recon Family Size = 27, Final Multiple Alignment Size = 26 )
GGTGCAAAAGTAATTGCGGTTTTTGCATTGTTGGAATTTGCCGTTTGATA
CTGGAATACATTCTTAAATAAATGTGGTTATGTTATACATCATTTTAATG
NGCATTTCTCGCTTTATGTTTTTTTGCTAATGACTTATTACTTGCTGTTT
ATTTTATGTTTATTTTAGACTATGGAAATGATGTTAGACAAAAAGCAAAT
TCGAGCGATTTTCTTATTCGAGTTCAAAATGGGTCGTAAAGCAGCGGAGA
CAACTCGCAACATCAACAACGCATTTGGCCCAGGAACTGCTAACGAACGT
ACAGTGCAGTGGTGGTTCAAGAAGTTTTGCAAAGGAGACGAGAGCCTTGA
AGATGAGGAGCGTAGTGGCCGGCCATCGGAAGTTGACAACGACCAATTGA
GAGCAATCATCGAAGCTGATCCTCTTACAACTACACGAGAAGTTGCCGAA
GAACTCAACGTCGACCATTCTACGGTCGTTCGGCATTTGAAGCAAATTGG
AAAGGTGAAAAAGCTCGATAAGTGGGTGCCTCATGAGCTGAGCGAAAATC
AAAAAAATCGTCGTTTTGAAGTGTCGTCTTCTCTTATTCTACGCAACAAC
AACGAACCATTTCTCGATCGGATTGTGACGTGCGACGAAAAGTGGATTTT
ATACGACAACCGGCGACGACCAGCTCAGTGGTTGGACCGAGAAGAAGCTC
CAAAGCACTTCCCAAAGCCAAACTTGCACCAAAAAAAGGTCACGGTCACT
GTTTGGTGGTCTGCTGCCGGTCTGATCCACTACAGCTTTCTGAATCCCGG
CGAAACCATTACATCTGAGAAGTATGCTCAGCAAATCGATGAGATGCACC
GAAAACTGCAACGCCTGCAGCCGGCATTGGTCAACAGAAAGGGCCCAATT
CTTCTCCATGACAACGCCCGACCGCACGTCACAACCAACGCTTCAAAAGT
TGAACGAATTGGGCTATGAAGTTTTGCCTCATCCGCCATATTCACCTGAC
CTCTCGCCAACCGACTACCACTTCTTCAAGCATCTCGACAACTTTTTGCA
GGGAAAACGCTTCCACAACCAGCAGGATGCAGAAAATGCTTTCCAAGAGT
TCGTCGAATCCCGAAGCACGGATTTTTACGCTACAGGAATAAACAAACTT
ATTTCTCGTTGGCAAAAATGTGTTGATTGTAATGGTTCCTATTTTGATTA
ATAAAGATGTGTTTGAGCCTAGTTATAATGATTTAAAATTCACGGTCCGA
AACCGCAATTACTTTTGCACG
>rnd-4_family-775#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 26 )
TTCTGTCATGAAAGAGGGGTATCATAGGATAGAACGNGGGCTTAGGACCC
CCATAAGCCCGCTGTTCAAGCTAGCCTGGCAAGCTGGTCAGTNACAAACT
TTGCTGCGGGTCCCCGAAACNAACACTGGATGAGANTTCTCTGTCTTGTT
TTATGTCCTTAAGAGCTTAACCTTGCGACCATGTGGCGATACTTTCTCTT
GGTCTCCGCCATCCAGAGAANAGGAATTTNGGGATTCATGTCATAGTCTC
TAAAAATTATCTTGAGCAGTTAAAAGCCTTTGCAAGCTCGAAATTGGCTG
CTCTAGCCTCCTTCTGGGGAGAACAATAGAAATTGCTCANTGCTGTAGCT
CAGTAGCTAAGGCTTTGCCTTTTTACAGTGGCAGCCTGGGTTCAATTCCT
GGCTTCTNGAATGAGTCCTTTCTGGTTTGATATCTGTGTAACTTTGCCAT
TTATTGANANTCCTCTCCTCCATAGTAGCTTCTGATTTTCATTTNCTGAA
TTTTCCTTTCTCTGAGCTACCCTGGGGAGGTTTAAATCTCTATTAAAAAA
CAAAAANAAGAAGAAAAANGAAGAAACTGCTTATCACCTCTTTGAAATAC
CTTGTACACTCGTGGTTAAGTCATAACCTTAATTAAGACTCATTGGTTTC
ACCTGGGAGGTTACCTTTNGTAAAGTTCAAAAGCCAGAAATATTAGCTGC
TTGGCGTGGCTAAAGTCGGGTAACAAGAGATTTGAAAGGATTTTTTAAAA
GAGAATATGGTTAAAAGTCAGCTTAATTAAAAGCGGATATCCAAGCTATA
GGCGTATTTAAAAGGCCTTTATGTTTTTCTTCTTGGATCTTGTTTTTTCT
GGAAAAAGGTTTTTTTCTTCTCAGTCGACTGAATTATTTTTCTCCATTTT
TTCTTTTGCCACTCTTAATGCATACATGAGAGGCCCTAAGATAACTTTCT
GGTAGCCTGGGACTCCTTGGGAAAAACAGGAGGCGCCACAGACCCCGTTT
TGTTGGAAAAAANAAAACCAAAGAAAAACCTCTGTTTTCCTCATGAAACC
CCAGGAATTAAAAGCGGATAGATCCCTCTCAAAATCAAAGGCTCTGTTCT
GTTTTGCATTGCGTTACCTGACANTTTTGAGTTTTGGGGGTATCAGAAAT
TACTTCGCGTTAGAGAGAGCTTTNGTGTGTAATAACTAGGTAAAATATAC
TTTAGAGGATGGCTAATAGTAGTTATAGGCGGAATACTCGGCTCTTTGCA
CGTTTGGATCAGAGAAGCATGCTCTTGGCCACCTGGAAAGTATGGAAACG
TCCCCACCCCCCACCGAGAGATGAGACTCCCATGGGGGTGGCTGATTACA
AAATGGGCCGACTGGCTTTGGGTTGCCTTGCAATGAAATGCACATGGTAA
AANCACTGCNCTGTCTTCTGTAGTATTTTCCTCCTTTCGGGGATCCAGGA
TCCAGTATAAATGATGGCACCCTTAATTTTGGGGATCTGTTTTTGCCTTC
AGCTATGCCTGTTTATTAGGCCCTAGAAACTGCATGCTTTCCTNGCTCCT
GTTCCTCCAAGGGCTCCACCCTGAGGCCAGTAATCCAATTAGGAAACTGG
CAAACGAAAAATCTTACAAGTGCTGGATCTTCTGTCTGTCTGTGTTTATA
TATGTGTTGTGTGTGTGATGTNTATATGAAAAAGTTCTGATTAATTGGCT
AATAGANAATAAGCGCTTAAATCGAACATTTTGAAGAAAAGATAGAAATT
GTTGCCTTTTCTTCACGTGACTTTTAGAAATAAANANAGTTTTAAAGATT
ATTGATAAAATGTCTTNAAAATATAGATATCTNGTCTAAATTAAGTTCAA
GATATCAGATTTNATCAATGCTTTAAGGTTAAACTGTTCCCTTGGGTTTT
GAGACGGTTGGTTTACCTACTTTACAGCATTAGACTATAGGTAGNACCCG
GGGCACNCAGAAATAGCTATNCTGAACAATGAAGCTCNGACCTTACACNT
CTGCCTGANGTCCCAGGNTCCACGCATGGTATGTAATTAAACATCGCTTG
CCTAACCAGGNTTCTCACTAAAANNGAAAGTTGCTAAGAGTTAACATTAT
AACATGAAGTTAAGCTTACTAAAGAAACAGTTTTACATACAAGGTGTATA
GGAATGTGTTTTTAGTAATAGGTTATAAAAAGGCATAGGAATATGGTTTT
TGTTAAGGTTTGGGAANNTAACTTTNCCCAGTTTGGAGGATACATCTGAG
AAGANTGCCCTACAGCANAGNGACANAACAAAACTGAAGATTTAAGCAAA
GTAAAAGGGTTTATAAAGGGTTAATCTTGAAAAAAATTCTATGGGTATAA
ACAAGTAGGCTAAGATTTAAAAAAAAATAGCTTTTTCCACAGCTTAAAAC
ATTAAAATAATACTGATATGGGCCAGAATCTGGGCCCATGTATCCGAATA
ATAGGGTTTTCTTAAAAAACTGATCTGCTATTTGATGGAAAATCATAAAG
GGTTCTAAAAAGTTTATGAAAATCTTACCTTATAGGCAAACTAATTAAAA
CTTAATAAAGATAAAAAATTTTATTATAAAAAACTAGCTTTAACACTGAA
GACACCTAATGCAAGCATAAAATTTTGTTTTCTCTTTGGAAGACAATTTT
TATCTAATATTAAAAAATAATGAAAGGGATTTGTTTTCTCCTGTGGATAA
ATGGCAGAGGGGACAGGAAGAAGAAAAAGAGACAAATTCAGTTAGCTTCA
TGTTATCTTTGTTGGGTCTTGTTTGGAAAGCGAAGTCTCCACTATCAGAG
TAAAGATTTTTCTTTTTAAGATTTTGAGATTATCATTTTGGTCCAATGAA
TGACTTATGGTGATCTGAGATTGTATTTCATATACAGTGTTTTAAACCTT
TGATATTGACAGACTTTCCAAAATCAAATTATAAATTATAACTCTTTCTA
GCCTAATCTTTTAAATATTAGGTCCTCTACAACCCAAAAGTAACATCTGG
CTTATTTCATATAAAAATCATACAGGAAACATTGGCAAATATGAAATGAC
GTTTAGCTTTCTTTGGGCTATATTTGTATAAATGTATTATTGGCATATGT
TCCAAAATTATGTAAAACTCCTTTAATTCTACTATGACTTAGTATATGTT
ATCAGTAATCATTATGTTAGATGGCTGTGTGTCTGTCACAGAGGTAACGA
ATTTCCATGTTAATCCTGTCCTTAACTGTGGCTGCCCTGAAGTATTTTTG
TCTCATTTGTTATCTTATTTTGGTCCTCTGAAAAAATGGTTTTATGATGG
GCTATAAAATTTAACAGGTGCTCTTAAATGCAAGTGTTTGATTAATAACT
CTGGAGATTGTGACATTAAAATAAAAGGAAAACTTTCAAATAAAAGAGTG
AATGGTGTTTGGTTTTCTTTAAACTGTATTTGTATAAATATGTTATTAGT
ATTTATTCTAAAAATTATAGGAAACTTCTATAATTTTAATATACTTTAGT
GTGCATTATTAATAATTATAATAAATTGTTGTATGCCACAAAATTAGCCA
AAATTTCTAGTTAATTATAGCTTTAATAGTGGCCATAGACTTTTGTCATC
CACAGACCTTTTGTCTTGCTTTGGCTCTTTTCAAAAGGCAGTTTACAATC
ACATATAAAACTCTGGATGCAAGTGTCCAATAAACTTTAAAAATTGTGCT
ATTGAAATAAAGAAAAAAGAAAAACTTATAGAACTCTCGTGGAGAGCTAA
CGTGTTAAACATTGCTCATCCTTTTTTTTTCAGAGTCAAGATAACTTATT
TCTTTAAAGTTATTTGCAACTTTTAATAAGTGAGT
>rnd-4_family-728#LINE/L1 ( Recon Family Size = 27, Final Multiple Alignment Size = 26 )
AACTTCCATTCCGGCCAAGATGGAGTAACAGGGACCGGATTTACCCTCCC
GCCTGAAACAACCAAA
>rnd-4_family-386#DNA/hAT-Charlie ( Recon Family Size = 29, Final Multiple Alignment Size = 26 )
GATGGCGGACGTTACTGAAAAAGAATTCTGTCANCAGTANNTTTGGGAAA
TNCTGAGAAACAAGCTAAAACAGGTTTCTTTACTGCAGGACTTCTCAGAG
CCTTTAATATGCTAATGTACACTGTGANTCTCCAAGAGAGGAATATAGTN
TGCAGTGTTTCCCAAACTTATTTGACCTTTCACGGAATNCTTTTTTTNAT
CTCAGNATATCTTCCAGGACTCAGGTTTTCCAAGGGAATACACTTGGGGA
A
>rnd-4_family-599#LTR/ERVK ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
GTTGGGAAAAGCAGCAAAGGAGAAAGGACTTACAGAGTGCCTACATAAAT
TGGTTATGAGTAACATATAAACAAGGAACAACAAACTGCGGAAGGCCGCA
GGAGGCCTCTGAGGAGGAAGGCCTCTCCATGCCTCATGTTCCGGTGCAGG
GTGACCTAGGCTCTGTTACCATAAACATTGTGCTCAAGGACGTAAAACCC
CTTCGTAGCACTATGACGTAGCCAGACTTGTAGGCTCCTTGTAAGGCCCG
TGTTCCACCAGCTGCACATAGATAATAAGCTAAAGATAACCACATGTTCT
TGTTTTGTGAAACTCCCAAACCGCCACTGTTATCAATCCTTAGAATGACA
CACCAGTTCCGGCTCACTGATTCACTCCACCATCACTCCACCCCTACCCT
ATAGATCAAAGTGATTGTAACCAATAAATAGTGTGGATGATCAGAGCTCG
GGGCCTTCACTGTCTCCTCCAGAGTAATGAGTGATGGCCCCCTGGTCCCA
CTTTCTCTCTTAATCTGTCTTTTTCTCATTCCTTTGTCGCCACCGAACTC
GGGGTACCCACGGGTGATGTAGGGCTGGCTCCCTACATTCTGGTGCCCAA
CGTGGGGCTCATGGATCCCTACATTCTGGCGCACCAACGTGTGGGGCTCA
TGGATTCCCTAC
>rnd-4_family-646#LINE/L2 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
TTTTCTTCTCCCGGGAATGCCTTTCTCTTTTCTTTGACCGGTTAACTCCT
ACTCATCCTTCAAGGCTCAGCTCAGACGTCACCTCCTCCAGGAAGCCTTC
CCTGACTCCTCCAGGCTCGGTGGTGTTAGACGACTNTTCTCTGTTCTTCC
ACTTCTGTTNTAGCACTCACCACAGATCTGTAANTATCTACTTATTGTTT
AGTATCCCCACTAGGCTGCGATCTCTTTGAGGGCAGAGCCATGCCTTATG
CCCCCNGACACCCCGCCCCTAGC
>rnd-4_family-1084#LTR/ERVL-MaLR ( Recon Family Size = 29, Final Multiple Alignment Size = 25 )
GTGGTAGATTGAATTATTGNTCCCAATTCTTCACTTCCTCCCTGTANTAN
AATTATACACCTTGTGCCCTTTGCCATGCAGTTTTGCAGTACCTTCCACT
ATTGACGTTGGGCTTGGCCATGTGACTTGCTTTGGCCAATGGGACGTTAG
CGGACGTGACGCGAGCAGAGGCTTNAAACGTGCTTGGGCGGTNNGGCTTG
CTCTCTTGCGCTTCTGCCATTNCGAGAATGAGACGTNTGGNGTAGACCTG
AACCTGGTCTCGNNCTGGAGCCAAGTCCAGCTGAGTNCAGCCGAGCCCAA
CCGAGCCCAGGAGCCCAGATGAGATCAGCTGAACCCCAGCCAAATACAGA
CCGTAAGCGAGAAAAATAAATGCTTGCTGTTGTAAGCCACTGAGATTTGG
GGTGGTTTGTTATGCAGCATTATTGCGGCGGCATAGCTGGCTGATTAACT
CAACATGATT
>rnd-4_family-576#LINE/L2 ( Recon Family Size = 27, Final Multiple Alignment Size = 25 )
CAGAATGAAAAATGACAAATTCTTGCCATGGCCTTACATGACCTGCTCCT
CTCTGACCTTATCTCCTACCACTCTCCCTTTCCTACTCGTCNGCTCCAGC
CACACTGGCCTCCTTGCTGTTCCTCGAACCATNCCAGACACACGTCCCTG
CTCAGGGCCTTTGCACTTGCCGTTCCCTCTGCCTGGAATGCTCTTCCCCC
GACGTANCCGCGTGGCTCGCTCCCTCATTTCCTTCAGGTCTCTGCTCAAA
TGTCACCTCATCAGAGAGGCCTTTCCTGACCTTATGTATAATGCGGGNGA
CNGCACGCTTCTTCTCCCCACC
>rnd-4_family-1452#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
CATTGTGCAAAGGAAATACAGGAAGGATAAACCAGAAACTAANGAAANTG
GTTACCTANAGGGTGGGTGGGGATAGGGGAAGGGNTAGCGGGGGAACGAG
AATGGCAGAGCAGAGGTGAGGAGGGAGTGACATCTTCCTGAGATACTTTT
GTATAGCTTTGACTTTCGGAACCATAGTAATGTTTCATATACTCAAAAAA
TAATTAAAATCAGCCAGATGCGGGAGAATCCAAAATGGAATACAAACAGT
AACAAATGAACCTAACTGTATTACAAATGAATAACATAACCACACTGAAG
GGGTGGAGGAAGAAAAAGAACTGACCTAAGTAACTTTGGAAAACGGTGTT
TTGACTANATACTTGAGGCTAAAGACAAAAAGAACTGTACAAACGCTGTA
CTCTAGTTGGTAAATTTGTTTCTCACAGGGGTATGGGTTAGCAATTCTGA
AACTACTTTATGTGTATNCTAGGGTTGAACAAATAAGT
>rnd-4_family-3428#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
TGTGGCAGGCCAGGTCTCACTAACGCAGGCCTCCGTAACAACTGTTTCAG
CACTGACTGAGTGGTTAAGTTAAATATTAAAAGCTGAAAGAGCCAGTGCC
CTTATACAAAGGCTGGAATGTAACAAAAGCCCACCAAGAGTTTTGCCTAG
GCCTTTCCTGGGCCTTGAAGCATGACAAAATAACGAAGGAATTCTTAACA
GGACCCATTTAGGATTAAACAAGTTTTATTGGGGGTCTGAAGAAACTCCC
CAGGCCTCCACAAACAAGTTTATTGGGGGTCTGAAGGAACTCCCCAAACC
TCCGTGATTTAGCAGGAGACAAGATAAGGGTAATCACCCCAGCACCTGGA
CCCATTTAGATTAAGTAAATTTACTGAGGCTCCAGAGGAAGGTCTTCAGG
ACTCAGACCTTAGTTATAGATTAAAAGAAGTTAATCACTTATGTCTTTAG
ATGAATGCACACTTACACGTAGACATATAGCTTAGAAGGTATATAAGCTC
TGGAAAACTTTGTAATTTTGAGTTGGTCTGGCGATAATTTCCAGGCCTTC
TCCCTGTANCCGGTTACAGAAATAAAAACTCTCTTCCTCCCCAGTTCATC
TGCATCTCGTTATTGGGCCGCGAGAANAAGCAGCCCGACCCTCGGTTTGG
TTCTGGA
>rnd-4_family-3036#LINE/L1 ( Recon Family Size = 29, Final Multiple Alignment Size = 25 )
AGATGTGCTNCATCAAGAAAGAGGGAATGANCCAGGAAGTAGGAGATATT
GATTGCCTCCAGAAGGCAGGTGGATCCAGTACAAGAGGCAAAGGAAATAT
CCCAACTGGTAATCAAGAATTCTAGGATAAGGCTGNGTAGCCGGNCAAGA
AATCAACCGATGGANATTGGAGGAGGTAAAAAGGGAGCGAGANTTCTCCA
AGAAGATGAAACTGATAGAATACCTAATGTGCTTCAATTNTTGAGAGGAG
ATTTAGACAACTANGGAGAGTATTTNGGGTCGAATTAGTGATAAGNACAT
AGAAAACTAAGCAAAGAGAAACAAGGCAATTATTAACTCCAGGAAAAACG
AAAAGTTGTACAGGAAAGGAAAGACATAAATGGCTCAGCTNTGAATNGCA
TTTACNTAGTCATAACAATATAAACACTGAATATTGATCTAANCAAAATT
ACGATGTAATCATATTGGGAGATCGTGGCGAAGGGAAGTAAGCTTGAGGA
GGNGGTGGCAGAGANCTAAATCCTCANCCNCCTAGNAGGAAGTCAATAGA
TAATGCCTAAAACCGNGAAATCAAGAAGTAGCAATACAAGCATATTATTT
AGAGATATGGAGC
>rnd-4_family-1399#DNA/TcMar-Tigger ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
TGTTTTTTACAAATTGAAGGTTTGTGGCAACCCTGCGTCGAGCAAGTCTA
TCGGCGCCATTTTTCCAACAGCATGTGCTCACTTCGTGTCTCTGTGTCAC
ATTTTGGTAATTCTCGCAATATTTCAAACTTTTTCATTATTATTATATCT
GTTATGGTGATCTGTGAC
>rnd-4_family-162#DNA/hAT-Charlie ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
ACAGTGGTTCTCAACCGGGGCGATTTTGCCCCCAGGGGACATTTGGCAAT
GTCTGGAG
>rnd-4_family-328#DNA/hAT-Charlie ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
AGCAGAAATTGAGAGTAAGAGCTTAGAAACTTTTATAGCAATTTGACAGA
GTAATTTTATGTCTGTTGAATCTAATAATAAAAAATTGGGGCTTGTATTT
TGTATGTATTTTAGTTTCATTTTCTAGTAATTNATTTTTATTGTATTTTA
CAAAAGTATAGTCGTCGACGGATTGGAAATTAAAAAAAAAAAAAACTGGT
CCTTCACCACAGATAGTTTGAGAAGCACT
>rnd-4_family-641#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
GAGGATGTTTAGGGCAAGTCAGAAAGTCCAAGCATGTCGTAGATGGTCTG
CGTAAGTCATGAAAGAATTTATGAAAGGGAATTTATGCNAGAAATGTCGT
ACAATTTAAAGGTGATTAGGCCTCCTAAATGCTTATTCATAAAATGCCAC
TNTGACTCTTAACTGTACAGCTTGCCTGCTTTACAGCTAGGTAAGGCCTG
GGACACGTGGAGTTAGATGCTGGAAAGAGTCAGACCTTATCTGCATTTCT
GTCTGGGTCCTAGGCTCCACACTTAGTACATAATTAAAATCCCTNACTTA
TCAAGGTTTTCACCAAAAGTAAAAGTCGCTAAGAGTTAACATTGTAACAT
GTAATTGAGACTACTGAAAAAATAGNTTTACATGCAAGGTGTGTAAGGAG
AATGAAATGTGTTTTTGTAAGAGATTATAAGAAGGCACGGGAATGTAAAT
TTTTGCCTAGGTTAGAGGGTTAAAGGATTGTTTTAAATTAAATAAAGCTA
AAGGTTTAAACAAGTTATGGAAGGTTTATGAAAAATTAATTGTAAGAGAT
TCTGTGTGTGAACATATTGGCTAAAGTTAAAAGGGCATTATTCAGTTNTT
TTTCCGTAAATTGGACACTGGAATAGAAGCACAACAGAGNTTTCTCAGAA
CATTGNNCTNCTCTGAGAAAAAGAAAATTGTAAAGGGTTNTAAAAGGCTT
ATAAAAATCTTACCTTNTGGTCAAACCTTANTTAAANCGGAATAGATTTN
TNAAATGTAATTTAAAAACTAGCTTTAACGTTAAAAATACGCTAATGGAA
ACATAAAATTTGGGTTTTCTCTTTTAAAAGGGATTTTTATGTAATGTNAA
AANATANTGAAAGGTTTTTGTTTACCTTTTAAGTAAACCACNAAAGGAAA
GGAGAGGGAAAAGGGAAAGAAAGGAGACAGAGTCAGTTGGCCCCATGCTA
TCTCCACTGGNTCTTGTTTGGAAAGCTGAGTCTCCTCTCTATNNAAATGA
TGTTTTTCCTTTTNAAAAGNTTCTGAGCTATCATTTTGGCTAAATGAATG
GCTTATGGTAACCTAAGATTCTGTTTCGTNATATCCANTGTTTTAAACCT
TTGGTATTTAACGAACCTTTCAAAATCAGGCTCTAGATTATCATGCTAAA
TCAGCCAATACTAAAATTNTTTAAATATACAATTTGAATGAACTCCATNG
TNTAAGTCAAACTACCTACGACAACCCATTAGTTGTTAGTGCTACGCACC
TAAATTGGAGAAACAACTGGTATTCAAGAGGACATAAGTCCAACGTTAAG
CATGNACTCATGGAGAACCGGGACGGCCGCCTTGTNNTTCCTGAGTCCTT
AAAGCTTTGTTATTAAAGGTTCTGCATTCCATGACTCGTCGTGGAAAAGA
TAAAATAATCCAAATTGAATATATTGATGTGGTGACTTACAAATTGCNGA
AATGGTTTATAACCAATGTTTGGTTCCATATTCCTGGGAAGACAATTAAA
GCTTCAGGTACATTTGCGCTATCTGATGGGCCGTTTAAACATTTATAANG
GGATTTCATTCAATTGNCATTTTCAGTGCGTGTTTTCTGGTTGTATAAAA
GCTTTCCCATGCAAGAGAGCTAATGTTATAACAGTAGGTTATTATGCCAC
AGTGTATTTTCACCAGGTAAAGAAAGCTTTTTCATGATCCACCATGAGGA
CAATCAACCCTTCACAATCTAGAACCTGAAGATTGGATCTTCTGAGAACA
TCAGAGAAAGACTGCCCTTGCCATCCACACTACAGCAAAACTTCGGGACC
TTGAACTCTTGGGTTCATAATCTCACAACTGAGAAGGGTCCCTCCACATT
CCTGGAACTGTACACCCATTGGAACCCTTAAGGTAAAGCTAACCAGGGAA
GTTTCTCCCCAGAAGAAGATGGCATCCTTGATGTGAACAGCTTTTCCCAA
GATCACGGATCAAGACTTCTACTATCATGAGACTCTTATCTTTGAATATT
TTTTCCTTGCTTATGCCTCTGTGAACAATAGAAGTGAAAAGGAGGTCTGT
TGTGTGCACTCATGGGGTATACTTTTATTTGTGAAGGATTTTGCAGCCAG
CCTTATACATGGATAACCTTATACTTTGATAGATGAAAGACGAAGGCCCA
ATGTAGGTGAGAAACTTTAATGGTACATACGTTGCCTCGTAATCAGNGAC
AGAANATCGGNTCACTCCTCTTAACCCACATCACGGGTTAAAGAGAACAT
TGCCAGGAGGCCTTCACTCTTCTAGAAGGGCACCATTTGTTAGGTCCTTT
TTCCGTGGTTTGGAGTAAAAGAGGCAATAATTAGAAATGTATCCCTCNTG
ATAGGCTCTATAGCAGATTCTACTGTAAAGGCCACGATTACGCAACAGAC
TTTAAATTCTCTCGTGAAAGTTNTGCTAAATAATAGAACTGGCTAAACGG
AAAGTACCTGCGCAGCTGCTGGCANTTGTGGCCTATGGAGAAACACATCA
AATGTACATAAGATTCAGTTGCAGGGGATTAATNAAAAGNCTACTTATTA
AGTGAGTAGACTCTTTAGACCGTTCTTTNATCTATTTAATTTTAGGTGGT
TTGGTTTACGGGGACCCTGGGTAAGGCGCATACTCCAAACTCTTGGTATT
ATCNTCCCGANAGTCAGTCTCCCTGGCGCGCTGTATTCTCTCGAAGGTTT
TAAATGNTTGCATGCAGCCNTCTCTAGAACGTCAGATGGTCTCTCTTNNA
CTGGNATNGCAAGAGCTGAAAAAAAACGNGTGACCACGAAGACACCATAA
CCTNTGAGTGANATGCNGAGACCGGAAACCCNGAGTGATGGTANCTGAGA
GCGGCGCTATGACCCTGAGTTTTGGTCACACTCTCATCTAAGTGAGAACC
TGGCCAAAAAGGGGGATTTTTCAAACAAAATTATGGGAGGCCATTGTTTT
GGACTGAGCTCNTGCGCTAGGCCCCAGCAGACCAAGCCAAACNAAAATGG
AGTCGCTCATGCTAAATGTGACATAATCGAACTAAAANACACATNTATCC
TAGAACAGACTAGGTTTTGTTTTTCTCCTGTAAACAGGATGTTCCAGCAT
AAGGAGGTACCCTCTACTCAGTCCTTGTTCCTACCTTTGCAAAACCCGCC
GTTCTACTGTTTCCCAGTGGGTTTCAAGACCAAATAAGTACATTTACGAT
GGTGATAGTGACATCAATGACTAAAGTTTTGGTCAATCTCTCAAAACTGA
GAAAATGACCAAAATGGGAAAT
>rnd-4_family-2129#SINE/U ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
TATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGT
>rnd-4_family-460#LTR/ERVL ( Recon Family Size = 37, Final Multiple Alignment Size = 24 )
AAGNAAGGGAGAATTCGCTCTCTCTGCCTGACTGTCTTCGAGCTGGGACA
TCGGTCTTCTCCTGCCTTCGGACTTGACTCAGACTGGAACTTACACCATC
GGCTCTCCTGGTTCTCAGGCCTTCGGACCTGGACTGGAACTACACCACCG
GCTTTCCTGGGTCT
>rnd-4_family-50#DNA/TcMar-Tc2 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
ATTCATTCTAAGATGCACATTTTTCNCATTTTAACATCTCTGAAATCGGG
ATGCGTCTTATAATCGATGGCATGTTATAGTTNTAATTGGCAGCGTTTTT
CTTTCTTAGTGGTACATAAAATAATGGTGCATCTTATANTCGATGGCATC
TTAGATTAG
>rnd-4_family-132#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 24 )
AGGACCCTGAAAAGCACTCTTGAATACAGGTTTCTGATAACTTTAAGATC
ATATCATTTAGACGGGTAAGAATTCCCGGAACCTAATGAAGANTTGAACT
GGGCAAGAATTCCCGGAACTCTAATGAAGAGACTGACTAGTTTATAAAAC
TGCTAACCCAAGTAGAACAAAAATTAATTGAATACCAAGAAAATACTTTG
CCAGATTTTCATGCTAAATCAGCCAATACTGAAATTGTTTAGATATACAA
TTTGAATGAACTCCATGGTCCAAGTCAAATTACCTATGATAACCCATCAG
TTATCAGTGCTATGCACCTAAACTGGAGAAACAACTGGTATTCAAGAGGA
CGTAAGTCCAGTGTTAAGCACGGACTCATGGAGAACCNGGACGGCCGCCT
TGTCCTTCCTGAGTCCTTAAAGCTTCCGTTATTAAAAGCTCTGCATTCCA
TGACTCATCATGGAAGAGATAAAATGATCCAAATTAAATATATATTGGTG
TGGTGACTGTTCTAAATTGCTAAAACGGTTTATGACCAATGTTTGGTTTG
TCAAACTCATATTCCTGGGAAGACAATNAAAGCTTCAGGTACATTTCTGC
TACCTGATGGGCCATTTAAACATTTATAGAGGGATTTCATTCAATTGTCA
TTTTCGATGTATGTTTTCTGGTTGTACAGAAGCTTTCCCATGTAAGAGAG
CTGATGTTATAACAGTAGATTATTATGCAAAGTGTATTTCCACCAGGTAA
AGAAAGCTTTCCATGGTCCACTGAGGACAATCAANTCCTTCACAATNTAG
AACCCGAAGATTGGATCTTCTGGAAGGAGATCATCAGAGAAAGACTGCCC
TTGCAATCCACACCGCAGCAAAACTTNGGGACCTTGAACCTTGGGTTCAT
AATCTCACAACTNAGAAGGGCCCCTCCANATTCTTGGAACTGTACACCCA
CCGGAANCCTTAAGGNAAAGCTAACCAGGGAAGTTTCTCCCCAGAAGNAG
ACGGCATCCTTAATGTGAACAGCTTTTTCCCGAGATCACGGATCAAGACT
TCTCTGCTATCGTGAGACTTATCTCCGAATATTTTTTCTTGCTTATGCCT
CTATGAACAATAGAAGTGGAAAAGGGGTCTGTTGTGCGCACTCATGGGGT
ATACTTTTATTTGCAAAGGATTTCGCAGCCAGCCTTATACGTGGATAACC
TTATACCTTGATAGATGGAAGATGAAGGCCCAATGTGGGTGAGAAACTTT
AATGGTACATNCGTTGCCTCATAATCAGTCAGAAACAGAACATTGGTCCA
CTCCTCTTAACCTACATCATGGGTTAAAGAGAACATTGCCAGGAGGCCTT
CACTATTCTGGANGGGCATCATTTGTTAGGTCCTTTTTCCATGGTTTGGA
GTAAANGAGGCAATAATTAGAAATGTATCCCTCATGATAGGCTCTATAGC
AGATTCTACTGTGAAGGCTATGGTTACANAACAGACTTTAAATTCTCTTG
NNAANGTTATGCTAGATAATAGAATTGGCTAAACAGAAAAGTATCTGTGC
AACTGCTGGCACTTGTGGCCTATGGAGAAATACATCAGACGAGTATTATA
GAGATTCAGTTGTAGGGGATTAATGAANAGACTGCTTAGTTAAGTAAGTA
GACTTTTTATCTAGCTCATTCTTTAATCTATTTGATTTTAGGTGGTTTGG
TTNATGGGGACTCTGGGTAAGGAGCATACTCCAAACTCTTGGTATTATCC
TCCCGATAGTCGTAATAGTCTCCCTGGTGCACTGTATTCTCTCAAAGGTT
TTAAATGTTTGCACGCAGCCATCTCTAGAACGTCAAATGGTCTCTCTTCA
ACTGGAATAACAAAACTGAAAGAAATGTGTAACCATGAGGACACCGTAAC
CTATGAACGACATGCTGAGACCGGAAACCCAAAATNATGGTAACTGNGAG
TGGCACTAAGGCCCTANGTTTTGGTCACACTCNNATCTAGTGAGAACCTG
ACCAAAAGNGGGGAATTTTTACAAACAAAATTATGGGAGGCCATTGTTTT
GGACCGAGCTCATGCACTAGGCCCCAGCAGACCAAACCAAACCAAAATGG
AGTNACTCGTGCTAAATGTAACATAATCAAACTAAGACTTTAAGGAACGA
TAGATCCTAGAACAGACCAGGTTTTGTTTTTCTCCTGTAAACAGGACGTT
CCAGCATAAGGAGGTACCCTCTACCCTAACACTTAAAGTCTTGTTCCCTT
TANACATCCACTGTCCTCCTATTTCCCAGTGGGTTTCGAGACCANATAAG
TACATTTACGATGGTAATAGGGACATCAATGAGTAAAGTTTTGGTCAATC
TCTCAAAANCGAGAAGATGACCAAAAGGGAGG
>rnd-4_family-101#Unknown ( Recon Family Size = 28, Final Multiple Alignment Size = 24 )
TTCTGCTATATGTGTGTGTGTGTGTGTGTGTATATATATATATATATATA
TATATACACACACACATATAANTTAGNAATGTAAGGATATTCTTTGCTTC
TAAA
>rnd-4_family-1180#Satellite/centromeric ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
GTGCTTGGCTTCCGTGGGGGTCCTCAGCGGCATGCCTGGATATCCGTCTC
GGGATTTGGCTTCGCCCCAGAAAGCTTCGGAGACGCTCTCTNCACCCGAT
CTGCCCCCAGGGGAGGCCAGTTCCAGGTGTCGCCTCTGCTGCGCCGCTGC
GCTTGCCGCTTTNTCTTTCTTNCCGCCTTCTCCGGACAGCAGTGNTGAGA
AGCAGGGGTCCCTGGGCTTGCAGANCAAGGCAGGGCCCCTTGNTGGGTGG
CCCGGGTCGAAGGAGGGGCAGTGAGCTCAGGGAGCCGGGGAACGTTCTGC
CGACACCCTCCCGGAGGCTCTCAGGTATCTTTCTGGGGTCCAGGGACCCC
CGCCACACCTCACCAGACTGAATCTCCAGCCCCGTGGGACCCGATCCCTG
CCCACGCCGTCCGATCCGGAATCTACTGGGGAGAGTAGT
>rnd-4_family-282#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 24 )
TGGTGCCGAAACCCGGGAGGAGTTGTAAGACCCCTCCCGGGGGAAACTGA
CTCCTCCACCCGAAGCCGGACCAGGGCCACCCCTCCANCGCCTCACGAGG
TAAGACTTCTGTTGCCCATAACTTCTCCCGCTGCCTGCTCTGTGGACTCC
CTGCCCGTAATCGCGGCCACGTCGGGGACTCCTTCTCNCTCGCCGTGGGC
CCGGGGCCCCGGCCTCGTTCCGAGGACCTGGGCATAGCGGAGACGTCCCT
ACACTCTTGTCTTCTCCCCGTAAGGGGTCTCTCAGGGCCAGGAATCTGAG
GGAGACGTCCCCACCTTCCTGAACCCTCCCGTAGTCTCCGGTGCTCGGTG
GGATGGCCCGGGACGCTGAGCCGCCCTTCCGATCATCTCCGCGGCGGCGG
CTAGGGTTTGGGTAATCAGGAGCCCGTTTACAAGCCCAGGCTCTGCCCAG
GACTAAAACCAGACCTCTGGCTCTCAATCTCAAACTTGCCCTTTGGCGGG
CCGGCTCCCGCCTAGGCACTTTTAGTTTCTCTCTCTTCCCTATTCCTGAG
TGAGTGNGTGAGTGAGTCAGTTATGTGTAGTCCCACGGCTTAACGGCTAC
GGGGCTTGTGTGGGCCTCCACCCGCGGTTCCACGGGGACATCATAAGGCA
TAACGGTGATTCACCTCAGGGCTGTCCTACTGGANTTCCATCCTGAGGTG
ACCAGGCCCGGGGGTTATACGGGTACACCTTAGCCAAGACGCNCCTGAAA
TACCCCTCCGGGGGCGTGGCCGGGCAGGCATCNGACTGGTCTCCCGTCTG
GGGGGCNCCCACCCTTTGTCCGTCAATCCTATATGTGGTCCTGTCTCTAC
TGTAGATTCGCCAGTTTTGTTAGACTCCTGCTAGCTGACATACAGTGGTT
CAGGCCTNCTTCCCTTGAGGTANANGATATTCTACAGTGGNTAACAGACC
ACTGGCTGCAGGGAACTTTTATTGAGTTTACGCCCCTGAGAAATAACTCT
GTTCTCCTTCTTTCTCCTCTTCTTCTTCTATCACTGAGGCCTCACTTCCT
CTCACTTCCTCTAACTCTGCCATGTGGCAAATAGCCCTAGCCCTGTCCCT
TTTTATTTTCTTCCTCATTGTNATCATTGCAGCCTGTAAGTTCTCTCAGC
CACCCCCTCCAGGAAAGGAGCNTTTCTGCCCGTGTTGGGTATAATTTCTT
TCCATGTCCACTTCTCGCCCTTAGGCCACTGAAGAAGATAAANTATGGGT
AATCAGGAGTCCCGCCCAGGACCCCAAGTCGCCATTGGGATGCCTGNTCC
GAAATTTNCCCAAACTGGGATACTNCCAANCCATNAGAAAGAAAAGGCTN
NTCTTCCTNTCCCNNGTGGCCTGGCCCCAGTACAANCTCGGTAACCAGTC
ACATTGGCCCCCGGNNGGCACTTTCGACTTCAACGTCCTAACAGATTTAG
ACAACTTCTGCCGAAGAAATGGCAAGTGGNNAGAGGTTCCCTACGTTCAG
GCTTTCTGGNACCTCCGTTCCCGCCCCGNCCTCTGCTCNTCCTGCNCCGC
CGCCCAAGTNCTCCTGGCCAAAAACCTTCCTTCACCGCCCTCAGCCCCTT
CCGACCTCCTNCTCCTCCTCTTCCGGNNNCGATCCGCCCGAAGANCTCTC
CTTCCTACCCCCCACCCGATCCACNAATCCCCCGCCNTATGCGGACCTCC
AACCCCCTCTCTCCCNCTCNTCCTCCTCCTCCGAGCCCCGATATGGCCTC
TCCTGTCAGTGCTCGTACCCGCTCGCACGCGCTCCCAGCGACGAAACTCC
CTCCTTTGCCCCCTCCGCGAGGTGGCCGGAGCNGAGGGCGTTGTCCGAGT
ACACGTTCCCTTCTCTCTCTCTGACCTGTCCGCCATCGAGAAACGCCTAG
GGTCNTTCTCCACCAATCCTGCCGCCTACATCAAGGAATTCCGNTACCTC
ACTCAGGCNTACGACCTNACCTGGCATGACACCCATGTAATCCTGTCCTC
CACCCTCACTCCAGATGAGCGTAACCGCATCCTCACGGCAGCCAGGGCAN
ACGCTGATCANGTACATCTCACTGACGACCAGATGCCGGTAGGCGCAGTG
GCAGTCCCCGAGGCCGACCCTAACTGGGATTATCAAACTGGCCAAAATGG
CCACCGCCGCCGAGACCAAATGCTACAGTGCCTCCTAGCGGGCATGCAAA
GCGCGGCCCAAAAAGTAGTTAATTATGATAAACTGCGGGAAATAACTCAG
GGTCCTGCTGAAAACCCCGCCGCCTTCCTCGACCGGCTAANTAACGCTAT
GGTCCTNCATACCCGGNTAGATCCAGCCTCCTTAGCNGGGGCTACCGTCC
TAGCCGCCCATTTTATCTCCCAGTCAGCACCCGATATTAGAAAGAAACTN
AAGAAGGCAGAGGAGGGCCCCCAAACTCCCATACGAGACCTGGTAAACAT
GGCATTTAAAGTTTTTAATGGCCGAGAGGAAAAGGCTGAGGCCGCCCGCC
AGGCCCGTCTACAGCAANAGGTGAGCCTCCAAACCCAAGCTCTTGTAGCG
GCCCTGAGGCCGGCAGCCCACCAAGCGTCTGGTGNAGGGGGCCCGTCAAA
GACCTCCAAAAGGGTCCCTCAGAACTCTAGACCCGCCCAGACTGCTTCGA
AGGTCCCGCCTGGGCCCTGTTTCAAATGTGGCCAGGAGGGACACTGGGCC
CGACAGTGCCCCTGTCCACGTCCGGNCCTACCGGACCCTGCCCTANCTGC
AAACGGNCCGGACACTGGAAGGTAGACTGCCCGTCCTGGACTACAGGCTC
ACCCCCCACACCTCCATGTGAGGGGCAGGCCGGTCCGAAGGANGCAGTCC
CNTTGCTCGAACTCCTTGGCCTNCTGGACGACTGACGCGGCCCGGACTCG
GGGACCCCCATCACCCTCGCCGAGCCCAGGGTAATGCTGCAGGTAGCGGG
TAAGTCCATTTCCTTCTTAGTGGATATGGGGGCTACCTATTCTGTATTGC
CTTCCTACTCAGGACCTAGCATACCTTCCCAGGTTTCAGTCATGGGAATT
GACGGNAAGCCTTCCTGCCCTAATCAAACCCATCCTTTAGCCTGTATCCT
CGAGGGACACCCNTTTTCCCACTCTTTTTTAATCATACCCTCGTGCCCAG
TCCCCCTTTTAGGACGAGACATTCTCCAGACTGTGGGGGCCACCCTCCAA
CTCACTGGCCCCCCACACTCAAGCCCATCNTCCGCCCACCTCCTACTGCC
ACTCCTAACCGACATCACGTCCTGTCCTAACCCCTCGCCTCAACCCCCTA
TCCCTCCTGACGTAGTTAATCCCCCGGTATGGGATACCTCCAAGCCTGTA
GTGGCCANACATCACACNCCGGTTAAAATACTTCTCAAAAACCCTACCCA
CTTTCCCTCNCGTCCTCAGTTTCCCATCTCAAAAACCCACCGTCAAGGCC
TAAAGCCTATCATCACCCGACTTCTNGCCCAGGGACTCCTTATCCCCACC
AGTTCCCCTTGTAATACTCCTATCTTGCCGGTCCGAAAGCCGTCCGGCGA
CTACCGCCTAGTTCAGGATCTACACCTTATCAACAAGGCGGTGGTACCCC
TCCACCCAGTGGTCCCCAACCCATACACCCTATTATCCAACATTCCCTCC
GCTACCTCTCATTTTACGGTCCTTGACCTCAAGGACGCCTTCTTTACCAT
TCCCCTTCACCCAGAGTCTTACTTCCTCTTTGCCTTCACCTGGACCGATC
CTGACACCAACCTGTCACAACAGCTNACCTGGACGGTCCTGCCCCAGGGN
TTCAGGGACAGCCCTCACATTTTCGGACAAGCNTTGGCGGCCGACCNCGG
CTCCTGCCCCCTTCAACCCAGTCTCCTTCTCCAGTACGCGGATGACCTGT
TACTTTGTAGCCCCTCCCTCTCCCTGTCNCAACAGCATACTGCCACTCTC
CTTAATTTTCTCGGATCTNAGGGATACCGGGTATCTCCCTCTAAAGCACA
GTTGTCAGTCACCTCAGTAGTCTACTTAGGCATTCGCCTCACCCCCAAAA
CTAAAAGCCTAACAAC
>rnd-4_family-953#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
CCCCACCTTTTCTGCATGGCAGATGAAAAATTGAAAGTACCTCTGATTGG
TCCCCTCCCGCAACCAATCAGACTGGTCGCGGGCCAAGTCTTCATTTGCA
TAGGAGTATAACTTTGTAACTTCACTTCAGCCTCTGATTGGTCGCTTTCT
GCAACCAATCAGACGTTTGCATAGGAGTGTAACTTTGTAACTTCGCTTCA
GCCTCTGATTGGTCGCTTTCCGCAACCAATCAGACTGATTGCGGGCCA
>rnd-4_family-4451#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
CATACATTTACTTTCTGCTCTCTCTTCCGAAACCNCACTAAAATGANAGT
AAAGGGATNTTTTAAAAGGCACAAACCCACAAGGACAAGAGAATGAGAAG
AGGTGGGAAACCACAGCAAATTTTGGAAGCTGGAAAGCAGNTGGATGAGT
AGTAACTGACTTAGCAGACCTGAGAAAGCTGAATCCTAAGCCGGCAGCGG
GAAAGCTAAGAGCAGCCTCTACCNCANACAGATTAGGAATTGGTAGACCC
AGGTACCTCTGGAAGTAAAGGTGGGACTAAGACAGGAAGATTGGCTAAAA
GTCTGTTTAAGAAGCAGTTAGATCTCCAGACTCCTTGTACTCCATGCCAG
TGGTGACTGNCCCTTCCCTACCCCGGCAGAAGACTGGAGGTTTATTCTCT
GGAGAGAGTAAAATANAGGGTTTCTGGACTGAGGAACGCTAGATATGGAT
TAAGATCAGGATCCCAAAGTGAAGATAGGAGGAGTAAGTAAAAATTGATA
TACTATGAATATTGATACCACCCCATGCTTCTTGTTGATCTGTTTTCCTG
GAATGTGGGTAGAAACTTATAAGATTGTAACCAGCCCAAGAGAAAGANNT
AAAGATACTGATNTTGACAGTTNTCCCCGAATGAAAGCGCTCAGCCGAGC
CATCNTACAGTGAAGACCATGGAGTGCGCGGAACTTCCGATCAGCTTTCT
TATGTCCCCTGCTCTTAGACACGAGNTGACAGCCGAGAATCACCAGCATT
TNNCTGAGNAAANTCTCTAATATGAAAGACAAAGGTCAAAGCAAAAAACA
ACGAAACAGGAAATAACCTAATGAAACAGAGATTATGCACGGAAAAAAGA
ATCGAAAAAATTTTCACAAAATTAATATCTTNAGAGACATGAGAAAAAAC
NGNGCTTTCACANAATNATTACAAGATG
>rnd-4_family-573#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
CTGTCATGGTGTAGCCCCAGTGNCCCCGGCCTCCTGGTATCCGCGCCCTC
GTGTAGTCCCCTCCCACACTGTACCAGGGCTGGTCTGTGTGACCAGTAGA
ATACGGCGGAAGTGATGGTGTGTGACTTCCGAGACTAGGTCATAAAAGAC
ATTGTGGCTTCCGCCTTGCTCTCTCTTGGATCACTCGCTCTGGGGGAAGC
CAGCTGCCACGTCGTGAGGACACTCAAGCAGCCCTGTGGAGAGGCCCACG
TGGCAAGGAACTGAGGCCTCCTGCCAGCTGACGCCANCGNCAGCCTGCCA
GTCACGTGAGTGAGCCATCTTAGAAAANAAGTCCTCAGCCCTAGTCAAGC
TTGGGTGACNGCAACTCCAGGAGAGATCTTGACCTAGAACCGCTCAGCCA
GGCTGCTGCTCCCAGGTTCCTGACGCCCAGAAACCG
>rnd-4_family-2538#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
TGATATCACTGGCCTGTCTGNAGCAAGACACCGAGCTGCAGCGGGGAGGC
GCAGCCGGGGCTGCACGCTCCACGGGGCCGGTGGGAGCCGGGAACAGGCG
GGAGCCCCGCCCCTTCCGAGTTGGCGGGGCGGGAGCTCCCACCCGGGTCA
GCTGCAGCCGCCCAGCCGCGGCTGCGGACCCGGGCATCCCCGCGCTCTCN
GGGGCCNAGGAGCAGGCAGAAGCCCCACCCTCCCGGGCGCAGCTGCAGCC
GCCTAACAGCCACGGCTNCAGACCCGGGCATCTCTGCGCTCTCGGGGGCC
CAGGAAGCCCCGCCCTGTCCCCGCAGGCTCGGAAGTGCCTGCTCCCGCTG
CCTGGCCTCTCCCCGCTCCCGGCACCCGCTCCAATTTCGGAAGCGCCTGC
CCCCGCTGCCTGGCTTCTCCCTACTCCCGCCACCTGCCCCTGCAGGCTCG
GAAGTGCCTGCTCCCGCTGCCTGGCCTCTCCCCCTGCTTCCGGCACCCGC
TCCAATCTTGGAGCAAAGTTGNGGCCGAGCCCGGGCGCTGTCACGGCCCG
GCCGNGTGTGCGCGCGCTCGGGGCAGTGCTGACACGCCAGCCCCCTGCCG
CCTCGGCCCCCTCTGGACTTTGGGCGCCGACGAGCACGGGAGGGAGGCCG
AGGGGGNGCTGAGGGCGGCTCGGCGCTGGCCTGCAGGCGCCCCTCAGCAC
GAACAGCCTGGGCAGCATGGAGGAGGCAGACAGGCTCCTGGGCGGAAAGG
GGCAGGTCCCCAGTGAAGCCCCACCTTCAAGCCAGGGACGGCCTGAAGCC
TGGGGGCCGGGCTGCCAGTCCCACGGACCGGAGTGGGAACTTACGGTGCC
TTTTCCGGGCCCGCCCATGGCCACCCATGGACCAATCAGCATGCACTTCC
TCCCCTCTGAGGCCCATAAAAACCCCGGACTCAGCCAGACCCAACAGACA
TCNGGANNACCGGCTGCAGAGAGGAGCTACCCACTNTAGGGTCTCCTCTC
CGCTGAGAGCTGGANACTCGTCGGGACGACCTGCCTGCGGAGAGGAGCTA
CCCACTNTGGGTCTCCTCNGAGCTGTTCTGTCACTCAGTAAAGCTCCTCT
TCGCCTTGCTCACCCTCCAGTTGTCTGCGTACCTCATTCTTCCTGGACGC
AGGACAAGAACTTGGGACCCGCCGAATGGCGGGGCTAAAAGAGCTGTAAC
ACAAACAGGGCTGAAACATGCCCCTTGCTCACCACGTTGCGGGCGACAAG
AAGGAGAGAAGAGCTGCAGCCCTTCAGGGAGCCCAGACCTAGGAGCTCCC
CGAGCCAGGGCTGTGACGCCCTCTTCGGGGCTCTGCAGTTCCTGGCGTCT
CCAAGCTTCCGGGCGCCAGTTCCNGCGCGTTCCCCGGTGCCCGCNGTGGA
AGCCGCTTGCAGTACACCTGGTCCAGCCACAGCCTCGCAGGCANCCAGTG
CCCGCCCCNCTGCAGCCAGCGTGCCTGGCCC
>rnd-4_family-2491#LINE/L1 ( Recon Family Size = 32, Final Multiple Alignment Size = 23 )
GATGGCCGACTAGATGCAGCCAGGAGGAACATCTNCCACCGAGGGACCAG
GACATGAGACCGGCGCACTCCNAACAGATCTTCAGAGGGAAGGCACTGAG
AGTGGACGGAGGGAAGACGCAGACGCTGGGCTGAAGGGGGAGGAAGCTGG
GAACCCTGCATGGGGCTACCGCGCGCCGGGACTCGTTCCTGGCCCCCAAC
GACTCCNGGGGAACGGGTGAGTTGAACNGGCAAGGAGCAACCCGCTCTCG
CCACGGGCCTCTGGAATCCTGGCAGNAGGAGACCCCNCGACCNCCACGGA
CACTTGAGCTGGCAGGGAGAGCTGCTTAGAGAAA
>rnd-4_family-793#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 23 )
TCACCTGGCGACCAACAACAGCAAAAAAGACAGCGGAGATGGCGGCAATC
GATGATCAGCAGAGAGGCGAGAGACGACAGAATGGCGATCGGTGAGACGG
CGAGAGAGCGGTAGTGAGACGGTGAGAGACAGTGATNAGCGAGATAGCGA
GCAGAGAGGCGAGAGACGGTGAGGCAGCCATGATTGAGGCTGCGAGAGCT
GTAACACTAAGGCTGTAACGCTAAAGAGCTGCTTACACTACGGAGCTGTA
ACACTAGCCGAAGGCTCTTTTCGGAGCCATTATTTTTCCCTGGCAGGTGG
TGGANCCAAGCANATAGGCAAGCGGCCGTAGTGCCACTGTCTCGTGTGAG
ACCCACCGCTCCGACCAGGGCAGGCCGGCGGGTTACCGGTCTCCGTGCCA
GCCCCCTATGTGGCAGCCGAGCCACCCAAGCTGAGGGAACCTGGAAAGAC
CTTCACCCGGGTCCCANGTNGAAGACCGGTCGGCGCCATTTTGGCTTCCG
TGGATGGATGAGTGTCCCCTCTGCCTCTCCCATTAATATCGGGTGAACTA
GGAAATNAGGAGAGCCTTTGGCTANGTGGTCAGTTAAAAGTTGCCCGTCG
TTTGAGTGCCCTCAAACATGTCCTTGTCANCCCTTCTCCCAGTTCTTTCT
CCTCTGACTCCATTTTATTTTTCCACCAGTCGTTTTATTTTTANTCCTAT
AANATATGTTTCGTTTGCAGTCTTATTTTGNTTTTGANTTTCCGTTAACT
GTATTTGGGCAATTGTTTAAGGCAGGACACTTGGTTGTGAGAGGTNCCCC
ATTGTGTTGACTCTGGGACACCAGAGTCACATTGTTCTGTGACCCCAACT
TGGTCTTGGGTTCACTGTTGGCCGCCCNCTGGGTGCCCTGGAGTTTTGAG
CATTTGGTGANGGGACCCTTATTGGCTGAAACTCGGGNACTCTGGGTTTC
CAGCATTGGCATTTTTGGCCACCTNCCGGATGCTCTGGGGTTTTCAGCAT
TGACATTCCCTCTAGGATTGTGGGTTATAGTCCCCTCCTCCTAAGGGAAT
ATTGGTCTCGCCTTTTTCTGCCCTGAAGTTAGAAGTTATTATTTCCCTAA
TAGCCAGTTACAGGCCCCTTCCTGTGTGCTGACTTACAGCTNCCTTGATC
AAGTGACCAGGGGTTCCCAGGCCCCTGGCCTGACGGACGACCAGCTACAG
TAGCAAAAAGTGGCCGCCTAAACATTTTTTTGGCGTCTCCGCTACTGGGT
AGGCTCTCCGGCAAGTCAGGGCCTCTGAGGTCTCCCCTTGGGCAACGCCG
TTTACACCCTTCCCGCCTCCCTTCACAGTCACCATTTGTTCAGCCCCCCT
CTCTGCGNAACCCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCCCTCTCCTTTCTGCTCTCTGCGGAATTTAGGCTCATCATTCTACTG
CCCATTCGTATCTCATAATCCACTTTTGTNACGCCCTGCTACCTATACTT
ACGCCTTCTCTGNAGAAATTGGCGGGAATCTAAAAGGGAAAAATTTGAAC
GAGAAAACAAGGCTNGGTTGCTTTCCCTCTTGCTAGACTTAGAAAAACTT
CTGTGTCGAAAATCCTTGTTAGTTACGGGGACAATGGCGAGCATCCCAGA
GGACTCGCCGCTAGGGTGNCTTTTAGGCGACTTGGAGCAAATTCAAATTT
GACAGCTTAAAGAAAANGAAACTCATTTTCTATTGCAACACCATTTGGGT
TCAATACAAATTAGAAGACCGANAGANTTGGCCTAAANATGGTTCTATAT
ATTATAATGATATTTTACAACTGNACTTATTCTGTAAAAAAGAAGGAAAA
TGGGAAGAGGTCCCTTATGTACAGGCTTTTATGACCCTTTACTGGCTCGT
GTTACTTCCAGGCACCAGGAAGCCATGCTTANCGGATNCCCTCCTAGCTT
CTCCCCCCTAGAAGGCCCACGCCCTCCCCGGAGNCTCCTCAGTCCCCCGA
TTCTGAGGGGGGTCCCGCCGGTTCTCTAACGAAGGATTCCACCTCAAGGT
CATCAGGCACCCCTTCCCTTATCCATCAGCCCCAGCCTATACCTCCCCGC
TCCCCGAGAAGGTAAGCCCAACCAGTACCACCAGGAGTGGGTCTCCCATA
TCAGCCCCTAAAGTNAAACCTGTGTCCATCGCGGGAGGTAGCTAATGGAA
ATAGGGGGAACATTAGAGTACACGTGCCATTTTCTATGTNTGATTTGGCT
TTGTACGAGGAAAGATNTGGCCAGTTTTTAGAGGATCCAGAAAAGTTTAT
AGAGGAGTTTATTAAGTCGATCATGTCCTTCGATTTAACTTGTCATGACT
TNCAAATATTGTCGTCCGCTTGCTGTGCCACAGAGGAAAAAANCGGAGGA
AAAAGTGGTTAAGCCAGTCAATTATGACAAAGNTAGAAAAATAACTCAGG
NAAAAGAAGAAAATNTCGCTCTTTTTCAGGGTCGTTTNGTTGAGGCACTC
GGGAAATATACTTAATGCAAACCCAGACTTCCCAGAAGGGCAAGCNCTCC
TGGGTATACATTTTATTACTCAATCCGTCCCTGAATTAGGAGAAAGCTAC
AAAAAGCAGCAACGAGACCTCAAANCCCTATGAGCCAACTCTTANACGTN
GCCTTTAAAGTTTGCAACAATAGGGACGGGACAAAAGAGGTGGAAAAANN
ACANCCGAAAAGCNCAATTNTTAACANATNCTTTAAGTCCCCTGCCACCT
CAGAATTACCCATCCNAAGAAAGCGTCGCGAGATCGGCATCCGGGATGCC
CGGANAAGAGCCCCTGACTCGCCGGCCCCTGGGCCAGAATCAGTGTGCCT
ACTATAAACAAAAGGGCGATTGACAACGAGAACGTCCTAACTATACCTGG
TGAGACAGAGAGAGAGAGAGAAAAAAGCTCCCCGTCANTACGGAGCTAAC
TTCTTCCACTAGCCCCAANGAGCTGCTTCAACTGGCTCTTGCTCAAGTAA
GTTTATNGGGAGTCTCGGACCCTTGACNCGACAGACAGCTTCCCACAGTG
GCAGACAAGCGGCCGCTCGAACATTTTTCTTCGGTGTCTCCACTGCTGGG
TGAGCTNTCCGGTAGCTCGGGGACTCTGAGGTCTCCCCTTGAGCAACGCA
GTGTTACNCCTTCCCTATCTGANGNCANGGGGTCCCNTTCCCTGCCTCNT
NCTGTCTTCCATACCCATTGTAGCAAACAAAATTTGGCCAGGTAGACGGG
TCCCAGTTCTGTAAATAACTNGAATCCANTTGCCNCGTNTAGGTCGTTTT
ACTTGATGTGTTTGTTTAGNTGTATATACAGGTATTGTGATGTGTGTTGT
GCGTANCNTGCTATCAAGCTGGNTTGTANATAAAAGGGCNNTCATGAATT
AAACAAGACTAGCCCAAGNTTATTAGTTTGAAGAGAATGCTGTGTCTTCT
AGAAATTTAATTTTAAGATTTTAACCTAGGTNAANCANTGANGTTNNTAG
GCTTTAAAATGNTTAAAGTGGCTTTAAATGATGACTAGTTTTGCACAGTG
TCTTTGTTCTTGGAGGTGGCCCAGATAAAAACTGTTNNAAGTGAAAAATG
TTNAATANATGTGAATNNANTNAATGCTTAAATGNNGAGCTTTTTGTGTA
GTTNAAAANCTTAAAATNGTAGAATGGTTCTCATCTATAGAATGCCAATA
TCTGGTAAGCAGTTCAGGATTTCTTGCTTCCTAGGTTTGTATAANATGTN
CCAAAGAAATGTATTCTTTATTANGAAAAAAACATAATTTTCGTCTAATT
CAGAGNTTATTTAAAGGGAAGTNNAAAATAAAGGGAACAGTAAGCAGGAG
AAAGAGATGTAAAGAAGTTATGGATATAAAGAGGATTTTTTGGCAAGGAA
GGTATAAAAGAGAGAGATAATTTTATATGAGAAAGAATCTCGTATAGTAA
ATTCTTGTCCTAAAGTAAAATGACTGGTTATTTAAGAAAGAGGGAAATNT
AGGACAAGNCAGAAAGTTCAAGCATGTTNTGGATGGTCTGTGTAAGTCGT
GATAAGGTTNGTAAAGGGGAATTTATGAAAGGAATTTTGTGTGTGATTAA
GCTGGCTATAATTAAAAGGAAATTATTTATAATAGATTTT
>rnd-4_family-82#DNA/hAT-Tip100 ( Recon Family Size = 27, Final Multiple Alignment Size = 23 )
CCAGAACTTGCTTCGAATGCAGAAAGAAGGCAATGGCGTTCTAAGAAACA
CGAACGACCAAGGAATCCTATTATATTCTTTCTTACTCACGTTACTTCCC
TGTATTAGCCAACCACTTATGCTGAAAATGATGACATAGAAGGAAAGGGA
AAGATAGGGCAACCCATAGTTCTTTTTCCTTTCAGTCCTTCCTTACTCAT
CAGTAAGCCGAAGGTAGAGAGTGTTGGTAGAACGTGCGCGTANCAAGANG
TGAAATAAAAACTGAGTTGAGTTAGTTTTGTGCAGCTATTTCCACTGTTC
CGGTAAGAACGAAATACATATGCATGTACGGCTACGAAATACGAATTGTG
TAATTTCAGTGATTCTGCATACGAGTTAAATGCTCTTATATTTGCATTTA
AAACTGGCATTGCACAATATAAAGATGAACGGTAAAATTCATGCTAATAA
TTTAAATTTTAAATTTTTTCTTTACTTAGAATGACATTAAATAGCAAATA
AAAAACACCTGACAAGTCAAGAGAGAAAGAGAGATCGTGGAAGAAAGGGA
AAAAAACTACATTGT
>rnd-4_family-1017#DNA/PiggyBac ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
CCTTTTCCCATTTGCCCCGAGAATACTCGCCGGCGGCGCTTGCGGCTGCA
GCGTTTACCCCGAGATAACTTTGCCACGAAATATCTCGCTTTTATTATTA
TTTTCGCATCGCTCTAGTATATCGACTTTGGAAACAAAAGACATCATTCT
ATTTATAGCATTCTGTTTTTAGTAGTGGTATTTCCATTTACAAAATATAG
TAATTCTCGATCGCTGAAAATGTCAAATCCTAGAAAACGTAGCATTCCTA
CGCGTGATGTTAACATCGTTCTCGAACAGTTGTTGGCCGAAGATTCATTT
GATGAATCTGATTTTTCCGAAATAGACGATTCTGATGATTCAGACGATTC
TGATGTTAGTTCTGTTTAGAAATAACTCCAAGAACAGTTTTATATTTTAT
TTTCACATTGAAAATCAGTCAGATTTGCTTCAGCCTCAAAGAGTGTGTTT
ATGTAAAATTAAATGAGCGCTGGCAGCGAGCTGCACTTTTTTTCTAAAC
>rnd-4_family-142#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
AATANTGTGGAACAGCTGAGNTTAACTGANAANAAGNTGTACCCAAAACT
TGAAAANNAGGCAAAAGGACGACTGCATGCTTTTTNCATTCACTGAAGNA
TTATCTAACAAGCCCGCCCCAATTATTTAATTCTCTAAGAAATGTACCTT
TGTTTGATTTNCTATTTACTATTGATTAGGACTCAGTCATGAAGTTACAT
GCTAACTTGTANATGTTTGTCCGGTAGAGATGCAAATGATTTCTGTCCAG
TAGAAATAAGATAACCCCAAAGGTTACGGTTTTATTGCCCTGTAGGACAT
TAACCAGTTTTGTATCTAACTTNAGCAGTCTTATTTCAGCATTCTTTCTT
TACAGACTATGCGAATTTCTGTTTCTCAAATTCTCTTTGAACCAGCTTTA
CCATCCCGCTGGTTTCCTCATTAATGAGTTAAATAAATCTTTGACACATG
CTCACTATATATTTGTATGAGAGTCATGTTTTCAACTTTTTGAAAATTAT
ACT
>rnd-4_family-2013#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
AGACTGAATATACAGACAATGGCCAGACCATATATAAAAATAGAACTCTG
ACCCACAACCTGCAGCAACCAGCCCAGGAAGCCAACCCATCCTGCTACGA
GTAACAGACTTGCAGGAAGCCAGACTACNATCTCTGAGCAACAGTCCAGG
AAGCCGAACAATAACCTCTGTAACAATCGGCCCAAAATGGCCAGGACTTG
GTCAATAACTGACAGCTTCCCTAATTTTTGCCCCCGCTTCCAACTTAGGA
CCAACCAGAGAAAGCCAAANATGCNCCNCTAACCAATCACGTAGGATGTG
CTTCTAGTTAGCCTGCCTCCCCATGCCAACAGCCTCCAATCAGGGCACAC
CTGAAGCCTTCCCTTTTTCTCACTATGAAGCTTTCCCGCTCCTCTGCCTG
CCTTTGAGTCTCTGCCAAACGCAAGTGATGGTGGCTGACTCCCTTGCTAT
AGCAAGCTCTGAATAAATAGCCTCTGCTTGTTCTCATTTGGGTGGTCTTC
GTTTATTTCCACACCGTGTGCCTAGAGGTCTTNACT
>rnd-4_family-387#DNA/hAT-Tip100 ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
GAGGCAAGCGAGGCGCCCAGGGTGCAAAATTTAAGGAGGCACTCACTCTC
AGGGTCGTGCAAGTGCAGGGTGACGCACCTCTGAGAGTGAGCGCCTCCTT
AAATTTTGCGCCCTAGGCGCCTCGCTTGCCTCGCCCTAGTCCCAGCC
>rnd-4_family-527#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
TGCTGGAACAGAANTTGGTACCTGGAAGCGGGGTGCTGCCATAACAAAAA
CCTAAAACATGTTGGCATTGGCTTTGGGACCGGGCGGCGGGCGGAGGCTG
GAAGGCCTCGAGGAGACTGTCAGTGGAGGCTTGATAGGCAGAGAGGGACA
TTGCTATTCGAAGCGGAAAAAGGGTNACCCGTGTTATGGAGTNATGGAAA
GAATNTAGCAAGACTGTTGCCTATAGTAACTTGGAAGATAGAAAAAATAC
NTAATNGCCTATGGCCAAAACGGATTTCCAGGCAGAATNCGGAAAGTGCC
AACTGGNTTTTCAACTGTNTATGATAAATGTAGANAGACGAGCTAAATAA
GGAATCGTTCGGTTTTTAAGCANAATTTAGAGGAAATACAAAGGANTCAG
GACTTCCGCATGTCAAACCGGAAAAGAATTCTCAAAATAAGAAATGGCCT
CGGGNCAAAGATCGAATCCANAGCACTGCCAGAAAAAAAATATCAAATGG
CCTCAGGNTAATCGATCAAATCAAGAATACGGCTGCAAGACCCTTCGTTA
AGACCTCNGAAATTTAGATTTAAAGNNAGTGCCTATATAGACTCCTNTAA
GCAAGGGAGTTCTAAGAACGGGCGTTGTCCAGTAGCACTCGCATNCCAAA
GTCTAGAGACTCGGGTATGGCTATCTAATGAAGTGGGTATTATTTGACAA
ATGGGAAGCCCACGTAGACTATTATTTAACACATAGGAAATCCGCAATTT
TTAAGGGAATTGTATCCGCTTAGACTAAAAGGGACAGAGACAGTTCAAAA
CGAAAAGAGCTGGAGCTCCCAACTTTCTATGGGCAGGAAGCAGACTGAGA
AAGCTACTCAGCTGCAAATATGGNNCATTTCTTATGGAAAAGGAAGGATA
CTCAGAGGGCGGAGCCAAGAGCCATGAGAANACGAGATTAGGGAACCANT
CNCAGGGAGCAGAACTGGACCCTAATCAAGAAATGCTTCCCGAGTAGAGG
AACTGGCAACATGCGCCCGGCTGGATTTCAGAATTGCTACGGACCAGTGA
CTGCTGTGTGCCTCCTTNCTTTCCTTCCCTTTTTGAACGGGAGTGTTTAT
TGCAGTTATCCTATNCCTGTCCCACCACTGTATGTTGGGTNTGGNATGGG
ANGGGANAAATAACTNTNTCTTTAATTCACAGGTCTTCAGAGTNAAGAAA
AATCTGGAGCTATACTCGAGGAGCCTTATCCACNTCTAGACCTGATNTAG
ATACGAGATGTNAGATTTTGAAACTGATNTGACATTGAATGCGGGTCTTG
GGAGGNAGTGGAAGGGTTGTAAACTGCTGCAGCCCAAGGGANGGCAGCAA
TNGAGGTAGTCTGTCTNTAAAGGTCACTGCCANNAATTCT
>rnd-4_family-545#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
TGGGCAAATTAAAAATAAGAGGCTTAATTCTCCCTGTTGAAAGTAAGGGA
AGAGACTNTCCCCACTTCTTCTCCCTTTTCTTAGAGCATTTACTTTAGAA
AACTTGTAATTTTAAGTTCTTTCTCTTCTCTTTGAAATGTATGTAAATCT
TCTTAAAAGCTAAATAAGCCTCTTGCCAGCTTTACGACCCAGGAATGTCT
TTCTCAAGGACCTGGGAGCCATCTCTTTGAAATGTAATCATCAAGGAAGA
TAGCGCCCCTATCTCCCAGTTTCTGTGGGAGGGTAGGAGCCTAACTTCGG
TCGAGTGCCTTTCCGCTCCAAGTTGCAAAACTACCTCCTGTCATAAAGAT
ACGAGAAGTTTATTTTTCCTTTGGATAAAGCCAATTAGCTAACACAGATG
GTCACCCCAATTACCAGGTGAATTTAGGATGAACTATGCGTGACAAATGG
TGCTGTCAAGTCCTCTTACTTGAGGACTAGTTATTATTTATCTTGAGAAC
ATGTATGTAATGGGTTGTATCTGCTTGGCTATATAAAGGGTGAGATTTCT
TTCTGTCTTTGCAATCTCTTAGCAGATTGCCTGTGATGCACATCACATTC
TGGTTTAATGCTTATTCAATAATAAAACTGTTTTCTTTCTCCTATTTCTG
GGTTGGGAGGAGATTTTGTTTTTAATTATATTTCC
>rnd-4_family-1831#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 22 )
GAAGCTGGCCCTGGGGCCAGAACAGAGTCTAGAATCATTACTGAATCTAG
CAACCTTGGTGTTCTATAATAGAGACCAGGAGGAACAGGCTGAAAGGAAC
AGGAGAGATCAGAGAAAAGCCGCAGCCCTAGTCATGGCCTTCAGGCAAGC
AGACCCAAGGGGCTCAAAAGAGAGAAAGGCTTGGGTTAGCCGCCAGTCTG
GCGGAGCTTGTTACCACTGCGGCCTAACGGGACACTTTAAGAGAAATTGT
CCCCAGAGGAATGGACCACCTCCTCGTCCTTGCCCACTGTGCCAAGGGGA
TCACTGNAAAGCACACTGTCCCAGGGGACGAAGGTTCCCAGGGCCTGAGG
TGGCTAACCAGATGACCCAACAGCAGGACTGAGGGTGCCCGGGGCAAGCG
CCAGCACAAGCCGTCACCCTCACCGAGCCCCGGGTAAAGCTAGCCATAGA
GGGCCAGGAGGTTAATCTCCTCCCGGACACTGGCGCGGCCTTCTCAGTTT
TNCTCTCCTGTCCTGGACGGTTGTCCTCCAAGTCTGTAACTGTCCGAGGA
GTCCTAGGACAAGCAGTCTCCTGATATTTCTCCCAGCCCCTAAGCTGTAA
CTGGGGAGATATACTCTTCTCCCATGCCTTCCTCATCATGCCAGAAAGTC
CCACTCCCTTACTAGGGCGGGACCTGTTAGCCAGAGCAGGAGCCATTATC
TATATGAACATCGTCAGGGAGGAAATCCCTCTCTGCTGCCCATTATTTAA
AGAAGGAATTAATCCCGAGGTTTGGGCAATGGACGGACAATTTGGACGAG
CAAAGAATGCATGCCCAATTCAAATAAGGCTAAAGGATCCCACCTCTTTT
CCTTACCAAAGACAGTACCCCCTAAGACCAGAAGCCAAAAAAGGGGCTAC
AGGATACTGTAAAGAACTTAAAAGCTCAGGGTCTAGTGAAGTCCTGTAAC
AGCCCTTGTAATACTCCAATTTTAGGAGTACAGAAACCTAATGGACAATG
GAGGCTGGTGCAGGATCTCAGGCTTATTAATGAAGCTGTGATTCCTTTAT
ACTCAGCTGTACCCAATCCTTACACCTTGCTCTCTCAAATACCAGGAGAG
GCACAATGGTTTACAGTCCTGGACCTTAAAGATGCCTTTTTCTGTGTNCC
ATTACATCCTGACTCCCAGTTTCTGTTCGCCTTTGAAGACCCTTTAGACC
AGAATTCTCAGCTCACCTGGACAGTGTTACCCCAGGGCTTTTGAGATAGC
CCCCANCTGTTTAGCCAGGCTCTAGCTCAGGACCTTAGTNATTTTTCACA
TCCAGGTACCCTGGTTCTTCAATACATGGATGACTTTTAACTGCGAACTC
AGAAACCCAGCGTCAGCAGGCCACCCAGGACCTCCTAAACTTTCTNGCCA
CCTGTGGATATAAGGTTTCCAAACCAAAAGCCCAACTTTGTAGGCAAGAG
GTAAAATACCTAGGGCTNGTCTTGTCTAAGGGCACTCGGGCCCTTGATGG
AGAATGTCTCCAACCCATACTGGCCTTCCCCCGTCCAAAGACCTTAAAAC
AGTTGCGGGGATTCTTAGGAATAACTGGTTTCTGCCGATTGTGGATTCCC
AGATATGGTGAAATAGCCAAACCCCTATACACTCTGATTAAGGAAACCCA
AAAAGCTAACGCCCATCTAATACAATGGGACCCTATAGCTGAGGCAGNCT
TTCAGACCCTAAAGCAGGCACTACTGCAGGCTCCAGCTCTAAGCCTTCCT
ACAGGGAACGACTTCTCCCTATATGTTACGGAAAGTCAGGAGTGGCACTG
GGGTTCTCACCCAGACTCGGGGGACCACGCCACAACTGGTGGCATACCTA
AGTAAGGAAATTGATGCAGTAGCAAAAGGCTGGCCACACTGCTTGTGAGT
CGTAGCCGCGGTGGCTATACTGGTCTCAGAAGCCGTTAAAATAGTGCAAG
GGAAAGATCTAACTGTATGGACTTCACATGATGTAGCTGGGATTCTGGCC
TCTAAAGGAGGCTTATGGCTGTCCGACAACCGCTTACTCAAATATCAGGC
CTTAATGCTCGAAGGGCCTGTACTTCAGCTGCGCACATGTGCAGCCCTCA
ATCCAGCTACTTTTCTTCCTGAGGAAGGGGCAGACAAAGAACATGACTGT
CAGCAGGTTATAGCCCAGAACTATGCGGCTCGAGAGGATCTCTTAAAAAC
TCCTCTAGCCAATCCTGACCTTAACCTATACACTGACGGAAGTTCATTTA
TGGAAAATGGAGTTCGAAAGGCAGGATATGCAGTAGTCAGTGATCAAACA
GTGCTTNAAAGTAATTCCCTTCCTCCTGGAACTAGCGCCCAGCTGGCGGA
ACTAATAGCCCTCACCCGAGCTCTAAAATTAGGAAAAGGAAAGAAAATAA
ACATATACACAGATTCCAAATATGCTTACCTGGTTCTGCATGCTCATGCT
GCCATATGGAAGGAAAGAGAGTTCCTAACCTCGGCAGGAACTCCCATTAA
AATCATAAGGAAATTTTAGACTTATTACAAGCTGTCCAAGAACCCAAAGA
GGTAGCAGTCTTACACTGCCGAGGTCACCAGAAAGNAGATGAGAAGGAAG
CGGAGGGCAATCACCGAGCTGACCTAGAGGCAAAAAGGGCAGCTAGACAA
GAATTTATGAAAGGACCTTTAATATGGGAAAACCCTCTCCAGGGAACTAG
ACCTCAATATTCATCAGAAGAGGTAGAGTGGGCAATCTCCCAGGGACATA
ATCTTCCTTCAGGATGGCTAGCTACCGAGGAAGNAAAAGTACTCCTACCT
GCTGCCAGCCGGTGGAAAGTACTTAAAACCCTGCATCAAACCTTCCATAT
GGGTATAGAGAATACACATCGGATGGCCAAATCTATATTTACAGAAAAAG
GTCTCTTCAAGGCTGTCCAACAAATAGTCAAAGGACGTGAAATATGCCAG
AAAAATAATCCTTTGGCACATCGCAAAGCTCCTCCTGGGGAACAGCGAAN
CGGTCATTACCCAGGTGAGGACTGGCAAATGGACTTTACCCATATGCCTA
AGTCTCGGGGATATCAATATCTGCTAGTATGCGTAGATACCTACACAAAC
TGGGTTGAGGCTTTCCCCTGTAGAACAGAAAAAGCCCAAGAGGTAATAAA
AGTCCTGATTAATGAAATAATCCCTAGATTCGGACTCCCTCGCTATCTTC
AAAGTGATAATGGTCCTGCCTTCAAAGCTGCAGTGACCCAAGGAATTTCC
AAGGCGTTAGGAATACAGTATCATCTCCACTGTGCTTGGAGGCCTCAGTC
CTCAGGGAAAGTGGAAAAGATGAATGAAATTCTTAAAAGACACCTAAAGA
AACTGGCACAGGAAACCCACCTCCCGTGGCCTTCTCTATTACCAATAGCA
CTCTTAAGGGCTCGAAACTCTCCTCAGAAAATAGGACTCAGCCCCTATGA
GATGCTTTATGGACGGCCCTTTCTTACTAATGATCTCGTATTAGACAAGG
AAACAGCAGATCTAATAAAAGATATAACCTCCTTGGCTAAGTACCAACAG
GCTCTTAGGACCTTACCTGAAGGACACCCTAGGAAAAAGGGAAAGAGTTG
TTCTGCCCTGGAGACTTGGTGCTTGTTAAGTCTCTCCCCTCAGACTCTCC
CTCTCTAGGCCCATCTTGGGAAGGACNATTTTCGGTTATTCTGTCTACCC
CAACGGCAGTTAAGGTGGTGGGAATTGACTCGTGGATTCATCACACTCGG
CTGAAGCCTTGGACACCTCCTGAAGAAAATCATAGGCCCTCCGCTCCACA
GCCTGAAGTTCCAGGAGACGACCCTTCATACACCTGCGAGCCGTTAGAGG
ATCTACGTCTGCTCTTCCGACGAGATCCCCAGGGAAGTAACTACTCATAA
GTCTAACTTACATCCTGGCATTAACAGGACTATCACTCTTAACTTTGCTA
TCTGCGGCCAGACTCTATGCGGTTGCCCCTACGGACTGGCCTAATAGCTC
TCCTCCTCTCCTTCCTAGTGCCCCCGCCATGACAATTTACACCGACTCTC
AGGTGCAGAGTCTTCTCTTGCCAAGGCCGCGCCATACTCAAACTCCAATT
ATTCCTTTCATAGTGGGGGCCGGGGGGGGCGGAATAATAGGAGAACTTGG
TGCTGGCATTGGAAGAGTTACTACCTCTACTCAGTTACTATAAGCTATCT
CAGGAGTTAAATAATAACATGGAAAAGGTTGCTAATTCTCTCTGCAAAGG
CAGCTCACTCTGCAAAACAGCTTAACTCTTTAGCTGCCGTAGCTCTTCAA
AGTAGAAGGGCCCTAAATCTGCTAACAGCAGAGAGAGAGGGAACCTGTCT
CTTTCTAGGAAAAAATGCTGCTACTTTGTAAACCAATTAGGTGTTGTCTT
AAAGTTAAAGAACTCAGGGATNAATCAAACACAGGGCTAAAGACCTTCAA
GAAACAGTATCGTGGAGCTTTTAACAACTGGCCGTCCTGGCTCTACCCTC
TTCTAGGCCCGTTTATAACCATTCTATTATTGTTGGCCTCCGGGCCTCTC
ATCTTTAACCTTCTTGTCACATTCGTTTCTTNTAGAATTAAAGCCATAAG
GTCACAAATAATCCTGCCACTGGAACCCCAGATGTCCTTGGCTCGTGAGC
TCTATCGTGGACCTCTGGATCAACCTGCACCCCTGAAAGGCTCCCCTCTG
GAGGAAACCTCAACTGCAGGGCCCCTTCTATGCCCCATTTCAGCAGGAAG
TAGCTAAAGAGTGATCGACGCCCGTGTCCCAACAGCAGTTGGACTTTCCT
GTTCAGAGGG
>rnd-4_family-1489#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
TCCGGTTCCAAAATGGCGGCATAGAAGCAAGCTGGCTTCACTCCCCCCCA
CAGAAAACCAAAAACAAATATACAGCGCCGAGATTATCACCAGCAATATC
CCAGAACTCAAATATGAGGATGAGACAGTTCCCGGGGCCACAGAGAAGTG
AAAAAACCTGAGCAGACGGTAAGAGAATTGGACTTCCATTACATGACTCC
CCTTTCTGCCTGGCACCAAGCGCGCGGAAAATTTTCCCCCAACTCACGGT
TTCTACACTGGAAAAAGTGAGATCGAGGTGGACAACCAGCTTCCCCACCA
TCTTGGGTTCCCTGGCAGGAGACCTGTCCCTGCCTCAACCCACGGGAAGC
ATCGCGAGTGCCTGAAGGGAGAAATATCCCTGAGGACAGNCAGAGACAAA
GGGGGGAGGCGGGACTACCATCCCCAGCCCTGGAAACTCTGCTCTGTAAC
TCAGCCAAAGGAGACGCCAAATCAGAGTGGCTGTTCAGCAGCACCACGCT
GTAGGAGGTNCGTTCCACAGGTCCCCTGGGCACGAACCCCTAGCCAGCCT
TCCCACACTGCCGGGATATTCCCTTTGGGACCTCCCCCATTCGGGANGGG
CAGCGCTCCGATCGTTTACTAGAGCCGAGGCGAACCTGGGCTTAAGGCAC
CACCTAGAGCCGAAAAGGAGGCAGTGACCTAGCAGTAAAGAATCTCTAAG
CAAATATATCCAATAAAAACCAAAACAAGCCAG
>rnd-4_family-6357#Unknown ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
AACATAAANTAACTGGGCCAAGAAGCAGCTTCTCCCCTCCTTCTGGAATC
TCCGCCTGGTTCAGCCCGCCTGCCTCCACTCCTGCCTCCACTATGTCCAT
CAGGGTGACCCAGAAGTCCTACAAGGTGTCCACCTCTGGCCCCCGGGCCT
TCAGCAGCCGCTCCTNCACGAGTGGGCCCGGTGCCCGCATCAGCTCCTCG
AGCTTCTCCCGAGTGGGCAGCAGCGGCTTCCGGGGTGGCCTGGGCGNAGG
CTATGNTGGGGCCAGCGGCATGGGNCGGGGAGGGCATCACCGCCGTCACC
GTCAACCAGAGCCTGCTGAGCCCCCTTAACCTGGAGGTGGACCCCANCAT
CCAGGCCGTGCGCACCCAGGAGAAGGAGCAGATCAAGACCCTCAACAACA
AGTTCGCCTCCTTCATCGACAAGGTGCGTTTCCTGGAGCAGCAGAACAAG
ATGCTGGAGACCAAGTGGAGCCTCCTGCAGCAGCAGAAGACGGCTCAGAG
CAACACGGACAACATGTTCGAGAGCTACATCAGCGACCTTAGGCGGCAGC
TGGAGACTCTGGGCCNGGGGGGGAGACAAGCTGAAGCTGGAGGCGGAGCT
TGGCAACATGCAGGNGCTGGTGGAGGACTTCAAGAACAAGTATGAGGATG
AGATCAATAAGCGTACAGAGATGGAGAATGAATTTGTCCTCATCAAGAAG
GATGTGGATGAAGCTTACATGAACAAGGTAGAGCTGGAGTCTCGCCTGGA
AGGGCTGACTGACGAGATCAACTTCCTCAGGCAGCTGTATGAAGAGGGGA
TCCGGGAGCTGCAGTCCCAGATCTCGGACACGTCTGTGGTGCTGTCCATG
GACAACAGCCGCTCCCTGGACATGGACAGCATCATCGCTGAGGTCAAGGC
GCAGTACGAGGAGATTGCCAACCGCAGCCGGGCTGAGGCTGAGAGCGTGT
ACCAGATCAAGTATGAGGAGCTGCAGGCGCCGGCTGGGAAGCACGGGGAT
GACCTGCGGCGTACAAAGACTGAGATCTCCGAGATGAACCGGAACATCAG
CCGGCTCCAGGCTGAGACTGAGGGCCTCAAAGGCCAGAGGGCTTCCCTGG
AGGCCGCCATTGCAGATGCTGAGCAGCACGGGGAGCTGGCCGTTAAGGAT
GCCAACGCCAAGCTGTCCGAGCTGGAGGCCGCCCTGCAGCGGGCCAAGCA
GGACATGGCGCGGCAGCTGCGTGAGTACCAGGAGCTGATGAACGTCAAGC
TGGCCCTGGACATCGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAG
GAGAGCCGGCTGGAGTCTGGGATGCAGAACGTGAGTATCCATACGAAGAC
CACCAGCGGCTATGCAGGTGGTCTGAGCTCGGCCTATGGGGGCCTCACAA
GCCCCGGCCTCAGCTACGGCCTGGGCTCCAGCTTTGGCTCTGGCGCGGGC
TCCAGCTCCTTCAGCCGCACCAGCTCCACCANGGCCGTGGTTGTGAAGAA
GATTGAGACCCNCGATGGGAAGCTGGTGTCCGAGTCCTCTGACGTCCTGC
CCAAGTGAACAGCCGCGGCAGCCCCTCCTGCGGCTGCCCCAGAGCCCGGG
AGGGAGGCCGCTGTGCAGGGGAGCACAGGGAACGGGAGACCCACCTGAGG
CTCAGCCCTAGCCCTCAGCCCACCCGCAGNGGAGTTTACTGCCTGGGGAC
CCCCCTTGCCCATGCCTCCAGCTACAAAACAATTCAATTGCTTTTTTGTT
TGGTCCAAAATAAAACCTCAGCTAGCTCTGCCGGAAAAAAAAA
>rnd-4_family-1732#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
TCTAGGCAGCCCTGGTGCTCATGAAGGGTCTTGGAGAAGGGGACTCNTTC
TCCCCCTCGTCCACCACTGCAGACACAGCTGGGGCTTCTCCCATGGGAGC
TCGGCGTGGGTGCACCTGTAGACAGCCTTTCTGGAACACTTCAGGGTGAC
TGCATCCCCACAGGAGGAGCGCCCTCCAGGTTCAGGCTTGCACGAGAGGT
AGAGTCACAATCCCTCTCTACATGGAACATCAGCATTCCTGCAGATGAAA
AGAGGTGCCTGTCTGATCTGAATAGCCGGAACACTGGGTCAGGAGCGTGN
CTGGGAGGTGGATCGCTTTCCTGCTGGCCTGGCAGGAGAGCTGAGGTGGC
TCCCNCCCTTCCCCCTGANAAGACCTCAGTGCGTTTCACTGAGAGCTCCC
CAGCCACCTCTGTCAAGGCTGGGACCTCTGCCCACCATTGGGTATTGCAT
TTACCCACCTGCTTTAGCCACAGCCAGTTTTTACCCATGGACACCTCCCC
TACTGGCCTGAAGCCTGAACTATTCAACCCAGTAAATAAAATACTGGGAA
AATAAATAAATAAATAAGTGCACACCACGGGGGAACGAGATAAGCTTCAA
GAGACCTCTGCCATTCCAACCCCACAGGAGACAGTGAACCTGCTCACACA
CCGAGCACATCGCTACTACAACCAGCATCTGAGAAAGCCATCATACAAAG
ACTCTCTATAACCAAGGAACTCATACAGAGTCTTCACCCCTGAAAGCACC
CAGAGCCGAATTAGGCTACAATAAACTATAANCATTAAAGTCACATCCTT
AAGGGGAAAAATAAATTTAAAAAAAAAATAAAAAACACAGTCGAATCAAA
AATAAATTCAAGAATAATTAG
>rnd-4_family-3335#DNA/hAT-Tip100 ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
TCAAATTTGTGTTTTGTAAGTGAAGTCCGATGGACAGGGGCAGANGGAGG
GGGCATGNNNCGGGGGCTTGGAGCCTCGGCTCACGCGCGGTCCTCACCTG
CCTCCCACCTCCCGCCTCCCCGGGACGGGTTCTGACTGCCCGCTCCCCCG
CTCCCTGGTGCCCAGGCCCCGCCTAGCCTCCCCCTCCCTGCCCCCCGCTC
AGCGACCGCTGCCACCCATCACCCCAGGGGCCTGGGCGNAGGCGCGGGGA
NGGTCGGGATCGGAGTTGGGCGTAGGCAGCGGCTGTCTNCGCCCTGCGCT
GGCAGCGCCACNGCGTCTTCGGNAAGGCGACTAACGGGCCTCTGCCCACT
CCTNGTCCAGGTATCTTAGGTCACACCTNGAGAGTCTCCCGNCCGTTGTG
GGTTGGGGCAGCGGGCCCATGGGAAGGGGAGATGCCTGGCTTAATCTCTC
TGCCCACGGGGCACGGCGCGTCGGTCCGGTGGCTGGCAGGAGGGGGAACC
TGCAGCAGTCGGCGTATGCGTGTNAGGGCAGGTCCCCCGGGCGCCCGTGA
GGGTCTNCATTCGCACGCAAGCCCGCAGGAGCACGACGTTAAATAGCAAA
TANAAAACACCACGACAGATCGAGAGAGAGAGAGCGGAAGAAAGGAAAAA
GCTTTATGTTTTAGTACCTTTAACGGCATTTCTCCCTGCTTTTTGAACAA
AGAGAGCCCATTTTTTGTTCTGCACGGCCCCGCGAATTATGTAGCTGGCC

>rnd-4_family-93#Unknown ( Recon Family Size = 29, Final Multiple Alignment Size = 22 )
AAGTAGCACACTTAGTATACATAAATATGTATATATATGTATGTATATAT
ACACACACACACACACACACACATACACACATGTATGTACACATATACCN
CTTNCACTCAATGTTAGATCTTCATGAACAAAACATGGTAAATTTTTCTG
TGAACGGAGCTGT
>rnd-4_family-1123#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
ATACGGGAGTGCTGGGAAGGGAAGAGCGTGGTCCCTTTAAATGATACGGA
AGCGGGGAAGGGAAGTGCTGGGTAGAGGAGGGCGTGGTCCCTGGCTAGGG
CTCCACCCCCACGGACCTAGGTGAGGACAGGCACTTCTGCTTGCCCCAAA
TGTTGCATTTCCCAAGACCACCCTGGCCCGCCACGCCCCCATCCTGTGCC
TATAAAAACCCGAGACCCCAGCAGGCAGACACACAAGCGGCTGGACGTCG
AGAGGAGCACATCGGCGGAAGAAGACACAAGCGGCTGGACGTCGAGAGCA
CGCCAGCAGAAGAGCACGCCGACAGGCGCCCGACCGCAGCCGGTGGAACG
ACGCGGAGTTTGG
>rnd-4_family-1565#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
ACTAAGAAAATATCTTCATTTTATTTCCTTTTTCCTTTATCATGTGACAT
AAGATTTATTGACTTCATATCAGCATTTAAGTATTGTTAACTTTATGTAA
TAGCATTTGGGTTGGGGATTGGTGCATTTCCGGTTGTA
>rnd-4_family-2439#LINE/L2 ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
ATTGCTCTCACTTCAAATTCATGACCACCTAACCTCAAGCGGNCTNTAGT
GCTGCCCCGCAGCCACAGTATACGTTAGTTCCTGGTCCACTCTCCNAGAT
GACTATTTCATACTTTCCCCTCTCTCCTCNAACCTCCAATATCTCCCATC
CATCACTCTCAGCTGATNACCTTGCTTCCTATTTCACTGAGAAAACAGAA
GCATCAGAAGAGAACTTCCCAAAGCTTCCNCCACCGCATCCGTTTCCACC
TGCACCTGTGCCCGCATANCTGCCTTCCCTCCTGTTACTNTAGATGAACT
GTCCNTGCTCCTGTCTAAGGCCAGCCCCTCCATTTGTGCACTAGATCTCA
TTCCCTCTACTCAAGGACATACTTTCGNTAANTCANTCANTTTTCCATCG
TTTATGTTGCATTATTCCCAGAAANACAAACATGTTGTTATTTCTCTCAT
CTTAAAAAACAAAACGAAACCCTCT
>rnd-4_family-2545#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
TGAAGNCTACCATAAAGAACCATATNATNTGCAAGGTATATCCCGNCTTC
CGCCCAGNATGTAGAAAGCTNGAAAGAACATTGCTCACATCTAATACANA
AAAAAATCAGATAAATCTACAAAATCATAACTTTTCTTGAATCCATCAGA
GAGCTGAGGTCACAGGGCAACCGANTAGCCTCAAATCTAAGGAAAGACAG
GCGCCTNCAAGGATAGAGCCGGGACACGAGCNCTTGCTTCATGGCGGACC
CAGGANGAAGAGACGCCGATGTCACATGAGACAGNAAGAAGAATTCAGCT
AAATNTTTAACAAATCGCTAAAGGCCAAATGTGGGCTAATGTCACTGGGA
GCTGCAGACATGGGGAGGGTNCGCACTCNCTTTGGCGGNCTTTTCTCCAG
GAGCTCACCAGGTAGCCACTGAAGGAAAGGGTCAAAGCCCCAGCCGGAGT
CTGTAAGCTTCCAGAAGGGGAGGCAGCAAACTCTGCTTCTCCNTGGGCAC
CGGAGAAAGCCATTTGCCGTNGGAAGAAAAGAAAAGAAAAAGCCTTCAAG
CACCGGGGAAGATGCNAGAGAGTACAGNTCCTGTGTTAGANGNCTACTAA
TGCTGGAGAAGGGGCAGGATNACTGAGGAAGACCCCATCCCCGAGATTCA
GGGACACGGGGCCTGCCTAAGACTGAGGCTGAATCGAGACAACAGAGAAA
NNCCGCCTCCCCCACCCCACCAACGAGCGGNAGCACCGGTAAGTAACAAA
NCGCAGTCCGCTGCTGGGGGAATGGGCAGGAGTGAGAGACCCCTCCCGAC
AGGTGCAGGTGCACAGGGAAGATCTAAAGTTGAGGGTGGAGCAGGAACAC
TGAGAAAAACCTCCCAGTAAACCAGGCCCCACCCCAAGCACGATAGTGCT
AGAGGAATTTGAAGCCNGTAGTGCACTGAAGGNAACCATAACGACAACAA
AACCCAAACCCAGCTCAACTNCTGACTAGATTGACTCAACTCCCCACACT
AACAGACTAGNAAAAGAAGAGTATGCCNACTTCCAAGGNATAAATACTAT
TTATCTCGGTCTCTACTGTCCTGACCACAGTACCTAGCATCCGCAAAAAA
TTAC
>rnd-4_family-258#DNA/hAT-Tip100 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
CAGGGTGAGGCACTTGCCTGAGCACAAAATTTAAGGGGGACGCCAAAAAA
AAACCTCAGTAATCAAGATAAATAATATTTTAATGCAATATTTTAAAAAN
TCAAAATTAATGCAAAAATCCATGATGAACAAAATATCAAAATTTTAAAT
AAAGACAGGATCAAGTCAGTATTACTGATTTTCCCTTTTGCCTCAGGCTC
CAATATGGCTCACGGCACGGCACCGTTATTTTGATATTATCTTTATTTAC
AATTTTGGTTTCTGTTCATCACGGATTTTTTTGCATTAATTTTGATTTTT
TAAAATATTGCATAAATATTGATTATCTCGATTACTGAGTTTTTGGCGTC
CCCTTAAATTTTGCACCTGAGGCGAGTACCCGNCTCGCCCTG
>rnd-4_family-3113#DNA/TcMar-Tigger ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GACAGTCCTTGCTTGCACGGTTCCGATATGCACGAATTTCAGTTACCACG
GTTTAGTTAAATAACACCAGTCCCCCAACAACACGGTTCAAATTTCAGTT
ACCACGGTGTATTAACTGTGAGTAATTGCATAAAGTACAAACTTCGCTGC
TAGCTCTTCAGTCCACAAATCACTACGTAAAATAACAGACGCATCATGAT
CAGTGACCGATCACGTCACTTCTTTCAAATCTGTCAGTGATTGGTCACTG
CGCATCTGTTATTCANTTCACGCACAGACAGCAAAGCGTGTAGTTGTGTT
GCCTCCTTGTCTCCCAGTGATAAACCCACGTGACATTTTACAAAAATGGA
TAATCGAAAGAGGGAATTGGCCAACAAAGATGAAAGTGCAGCAAAGAAAA
AAAAGTGATAATGCCGNANGTGAAATTTGAATCGAACATAAATGGAGTTA
NAGNAGAAATAGCTGACCGTGGGAATGCTGACACTGCCGCTATTCGAGAG
ACTCTAGATATGCAGCCAGAGGAACTTAGTGAAGGCGAACTTATCGACAT
AAGTGAGGAAAGTGGTTGTGACGAAAGGATGAAGATGTCCCAGAGGAAGT
GACGCCGGCAAAAAACTTCACATTAAAGGAACTCTCGGAGATATTTCACG
ACATTGAAAGTGCAGAGGATAAAACGTTGGAAGCTGATCCAAACTTAGAA
AGACATGTACGAAAGNTGCTCGCTCCGTATCGTAAGTTATGTGACAAGCA
GAAGGCAAGCACTNTTCGAACTACTCTTGANANGTTTTTTACGAAGAAAT
AAAACACTTTAATTCTCAGTGTTTCTAATGTTTTAAATTGCAGTGTACTA
AATAAATATGAGTTTTACTANNTTTTTCATTTCCTCATACATTTATAACC
GACAGTAAGAGANTTTTAATGTTTTGACGAAAATTTTTAAAGGTCACGGA
ACAATCGCAATTTTCCCATTGATTATTAAGATCGCTTTGCACGGTTTCGG
CTTGCACGGTCATTTTTATGGTCCCGCACTACCGTGCAAAGCGAGGACTG
C
>rnd-4_family-1628#LINE/L2 ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
CAAAACTCAAATTGGACTGTTTNTTCCCTGCTTCCTGATTTCCNATCACA
CTTACATTAAAAGATAAACTGCTTAACTTCCCCCACCTCCCCAAGGCCCG
CAGGCCCTGCCCAACCCGTCCTCCTTCCCTCCTCCCTCTCTCCCACTCCT
CACTCTNCTCCAGCCACAGGGACCTCCTCGCTGTTCCTNCAACACGCCAG
ACACANTCCTGCCCCAGGGCCTTTGCATGGGCTGTGCCCTCTGTCTGGAA
AGTGCTTACCCCCCAATACCTTCCTTCTCACACTGGTTACCC
>rnd-4_family-2001#snRNA ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
AGTGAGGGTGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGT
TGATTCGGCTGATCTGGCTGGCTAGGCGGGTGTCCCCTTCCTCCCTCACC
GCTCCATGTGCGTCCCTCCCGAAGCTGCGTGCTCGGTCGAAGAGGACGAC
CATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGTAGCT
GCGCTCCCCTGCTAGAACCTCCAAACAAGC
>rnd-4_family-188#Satellite/centromeric ( Recon Family Size = 25, Final Multiple Alignment Size = 21 )
TAAATGTTGAAATTTGGGTTAAATGCTTCTCTCTGGCGAAATAAAGAAAG
GTGAAAAGATGGCCCAGGNAGATTTTACGTTTTTGTTCTGTTTTCCTTTC
TTTGTTTCCTCTGGTACTTTTTTCTTTTAATCAGTCCTAATNNTAATCAG
GAGTCTTAGCTGATGCAGCCCACNGGCTCTTCCCAACAGTCCGGAAGAAA
NTGATCAAAGCTCTGGGTGGGGTGGGNAAGTGAATGCGTGAACAAAAAGC
TAATTTAAAAGAGGCATCAGANTCTGAAAGGACANTGGCACAAAGGTTCT
TGCGNTTGTTACAGGGACTTTGTAAGGGAACCCGTTCTGATTTCTTATAA
AAAATTGTCTTCCGGTAAAGCCCTGTCAAATTNACTGAGGACACACNAAT
TAAATATTTCNGAAANAATAAACATATTGATAAAANAAAGATATTAGTGC
TGTCANATTTTTAAATATTTACTTCAAAAATTAAATTTTTACCTCCAAAA
TTATACGTTGATTTCAGAAAGAATACACATATTTTGATAAAACAAATATA
TTAGTTGTTNTTANGTTTTTAGATATTTACTTCCAAATCACGTCATCTNT
CTTCGTTATTGAGAATGTCACTTGTCTTAATTTCTCAAAGAATGGCATGA
AGTCTTAAATTTTATGAGNTTTTTCATACCACCAGTGAGAAAGATCGAGT
AAAAATTATAGTAGAGAAAGAGAAAGTCCTTCAACAAATCTAAGAAAGTT
GAAAGTAATTGGCTAATATTTTTGAGGTAGTTTATGTAGAATGTCTTGGG
AGCTATCCTGAAGGTTAAGTTTCCAAAAATATAGGATAAAGTACTAAGTA
GTTCCATGTTCAGGANATACACACGAATAATTCGGACGGCAGTATATCTT
TTGCAGTATGGCAAAAATGACACCCCAATCATGAGTCTAATACGATAGTG
TAANTGACACAACGAAAATAAAGAAAACAATAACAATCTTCTATAATGAA
GAANAATTTAATTNAAGAAAATTTTGTGGAGGTTGAGGACGGAGTTGAGG
ATGATTAATTGGAAACAGTAGTTANAAACATAGAGAGCTTGTGATCCTTT
TATTAATTATTTAAACCTATATGAGTATCTGCTGTGTCTTACTGATTGTC
CTTGAAATACGAGATTGATTGAGGTCTTTTTNCTGTAGGACTAAACCTAT
ANGTATTTATCGGGACTAATTTGTGCATGCGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTTTGATATGAGNTTGATTGAGGTCTTT
TTNCTGTAGGNCCTACAGGTCTTATCAGCACTGAACCTGTTGGNTGCCAG
GGATTTCACGNAGCTAAGGAGACTGGANGGTGGCTGGGTGCATGCCAGGT
GGCGGGTAGTGATCCCTGTGTAGGGGTTGGGGCGNTTTGCNCTTTTGCGG
GCTCCTTGGAGGCTTGAACTCTGGCACGGGCCCTCTTCAGATCGCAAGTG
TGATCTCCTT
>rnd-4_family-2216#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
AATCCGTCTCCCCACCTAGANAACAATTGCACTGGCAGAATCTGTCTGAT
GTAACTATTTTGGAACTCTGGAGTCTATTGAAGGCTTGCAACTTCCAGGG
GAAGGCTTGGACGGTAAATTGCGGTTAATTTCGGTCAATTTCAGCTCTTA
GCACAGTAGCAGCTACCCATCCCCTTCTCCAGCCCGTGGCAGGCAGCCGT
GCACGTGTTCCTGGAGCAGCNTGCACGCGGCTTGCGGGAGCCGGGGTGGG
CAAAAAAGGACCCTGTCCTCCAAATATCGGGGATCTGTGCTCTGATCGCT
GATTGCTGCTTCTGATCACGGAGGTGCAGACAGAGANGNGAGCGGCCACT
GTTGTTGCANCTCCTCCCATTGTTGCAAGCCCCTCCCCCTCCGGCTGAAG
TGACTTCCAGGAGATTTAAAGGGCTGGCACCCTTTTNCCTCCCCCTTCAT
TTTTTTCTTTTTCCCCTTTTGGGAGCCAGACATTAAAGACTAGGACATTT
CAAAAGCAACCGCATATACGGGGGAAATTAGAAAGTNACCATGCATGCCC
AGGGAAAGATGCAGGCTCAGAAAAGACCTGAGAAGACCTTAAGTTTACAC
CTCAGGCTGATCCTTGGCACAGAGACA
>rnd-4_family-357#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 21 )
ACCANAGTAAAGTTNCAGAAGACCNAAGCNNAGTAGATCTTAAAAGCAAT
CAAGGNTAAAAGACAGTTTACCCAANANGGGNAACNACTGAGAGATGATT
TCTCAACAACAGTGAAAGCCAGAAGACAGTGGAATGATATNTTTAAAGTG
CTGAAAGAAAGTAACTGTCAACNCNAGATTCTATACCCAGCGAAAATATC
TTTCAAGAATGAAGGCGAAATAAAGACATTTTCAGACAAACAAAAACNGA
CAGTGACTGGTAAATCCTGTCAAAAGAGAATTCCTAAAGGAGTTCTTCAG
GCAGAAGGAAAATGATCNCAGATGGAAGAGCNGAGATNCAGNAAGAAATG
AAGAGCAAANAAAGTGGTAAATAATGGGATGTTAATNTAANTGACCACTG
AATATTGTGCACGAAACGACAGTAATAATGAGCGTCATCGCGGAGGTTAA
AATACGTGTAGAATTAAAATACATGACAATAATAGNNACAAAGNTAGAGG
AGGGATAAACGGAATTNAAGTGT
>rnd-4_family-4701#SINE/Alu ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
CGGTGGCTCCGGCCAGTTGTCCTGGCGCTTGAGGAGGCGAGGCCATGAGT
TCAAGGCCAACCTGAGCAACGTTACAAGCTCTCATTGATTAACCA
>rnd-4_family-3290#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
TGAAAGTTGATCATACAAATTGGGTCATTCTTGTCATACCCAACTAAANC
AGAGTCGAGAGGCCAGGGGGAAAGCACTCGGGGCACATAACACTGCTCCA
AGAATGTAATTCTCTGCAAGCCCGGCTGCTGAAACTGCCTGCCGTAACCT
GAGACCAGTTTTATCTAGTAGCTGCTGAAACAACCTGCTGCGACTCTAAG
ACTAGTTTTACCTACCGCCGTCACTCACCAATCAGAGCTTGCCAGCTCCC
CAAAACTTTNCTAGTGCCAATGAACTTTCTTTCAAAGCAATACGTAACAT
TTCTCCTTTTNATAAAACCTCCAACCTTCTCTTTGTTCTTCGGACATACC
GAAGACCACCCAGTCTGTGTGTATGCCCCGAATTGCAATTCTTTCTTCCC
AAATAAAACATTTAAATTTAGAGATTCGTCTCTATATTTTATTAT
>rnd-4_family-1872#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TCAGGTCTCCATGTGCAAGCCTGGAGCCTGAAAGTCTGAAGTCCTGCCTG
CCTCGGCTGATGTCTCCCACCCCCCGCCTGCGTTCGCCATTGTCCCTGAT
CGCCCAGCGGAGCTTCCCCGGACAAGCCCCTCACCCCACCCTGCCATCTT
AACTGTTCTTATGATAATGTGAATACCCCTCACCCNACCCTGCCATTGTA
ACTGAACTTGTGGTCATGTATACTCCTTGCCCCTACCCCCC
>rnd-4_family-2453#LTR/ERV1 ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
TCTCTCAATCCTTTNTCTGCTCCCAAAGCACAGGATGAAGCTGTTCTCTG
AAGTTCCCTTATCTGCCTAAAGTCTGGACCCGCCAAAGAAGAAAACAACA
ATTGCCTCCGGTCCCTTCCCTGAGATTTCATTAACTAGAAGATGAACTCA
TATCGCAGGAAGAAAGACTGAAATCTATCAACACACCTGGACAGACTCTT
TGTCACAAACCATTGTCTGCTCTGCGGGCCCCATTCAACTTTNTCCCAGA
CAGAATCATTTGCCAGCCATTGTCTGCTCTGCGGGCCCAACAGACTTTGT
CCCAGGCCATTGTATGTTCTTCAAGCCCATTCATTTCCCCTAAAAATCAT
TTACTACCCCTCTAAAANTNACCCACACTTCCCCATCTCCCTTTCCCCTA
TGAAGAAGGGTACCTCATTGGATTATTGGGCAATCATCTCTGTGATTCTC
CCTGTGCGTGCACGTTAAATAAATTTGTATGCCTTCTCCTGTTAATCTGC
CTNTTGTCAGTTNATTTTTCAGCGAACCTTCAGAGGGCGAAGGGGAAGTT
TTCTTTTGGCCNCTACACT
>rnd-4_family-1004#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
AAATNTTAGTTTNATTNNNTCNCTCAAAATATATAATNCAAGAAAATTTT
CCTGAAATAAAAAANACTTGAAAACTACCTACATGAAAAGNCACACCGCG
TACCTGAGAANATCGACCCAGAATGATCAGCACTAAGACATATCCTAGCA
AAATTACTNGACTTTAAAGAAAAAGAAAAAACACTTTGGGCGTCTAGGCA
AAAAGCACCAAGTGGCTTAATAAGGGAAAAAATTAGATTATCATCAGACT
TCTAACAGCAATAGATAAAAANANAATTTATAACATATTAANATACTCAA
GGAAAGAAAAATGTGAGCCAAGGATTTTATATCCAGCAAAACTGACTTTC
AAGCATAACCAGCANAAACTGCTAAACATGCAAGAACTCAGGGAATATTG
TTCNTATGAGCNCTTCCTGAGGAATNTACTAGAGAATGAGCTTCAGACAA
CCAAAATGACTAGAGAGACATCGACATAAGANCTGNTGGGAACATTAAAC
ATATANTTANTCGTAGAACTAAGACTNAATGAGGCTTAAAAGAAAGAGAG
TACAGTATGTAATGGTTGTATGCTCNGACAATGTAGACATTTAANNAACG
TTNGAAAAAAGAAAAAATGGGGAGAGCACGTGAAAATGTTTTAAAATGCT
TTCAGTAATCACATGTATTGGTAGTGGTAGTATTAGTANTGTTATTCTGA
GACTGTTTGTGTGTANTGTGGGATAAACAAATGAGTAATTATGGGATATT
CTAATTCTANCATCCCCNGTGTCCTTGAGAACCAGGATTCTTGGTATGGA
AGAAAGNAGATATAGATGTAATANAGAAGAGNTTAAGTAAAAACCCTATA
GTCCTGAATTTAAATAGAAGCATCAATATGAACTTAT
>rnd-4_family-125#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 20 )
GGCGTCAGAAGTGGGATCCGAAGTAGAGCTTCTAGCGACCCCCAGGAGCG
CTGAGTGACCAAGCGAGGTACCCGCCGGACCCACTGTGTCCATTGCTCTC
TCGGAGCAGCTGGGGATCGTGGNTAAGTTCCCTCTCGGATTCCGAAGCTC
CACGGATTTGTGTTTTGAGCTCTCTGAGTTTCTTTGAGCAAATTTCTGAT
CCAAACTGGGTTTGGAAGTCGCGACAGAAACTGGACTGGGTCCAGGANCG
GATTNGATCCGGTAATTAACTGGCTTGGATCCAGTTAGAGGCCTCTNACG
TCTGACTGGGTCAGAAAGAAACTGGTAGTAAACGGCAATATTGCAGGGGG
TGTAAAATTCGGCTTTTGGAAATTCGCAGAGATTTTTGTGTTCTACCCCT
TTGTTTCATTTTTCTTGCGCGCTTAGGTAGGGAAAAAAAATCATTGGCTA
AGTTGATCAAGGGAACCTGAGAGCAAAGCCAATATTCGAGGTAAAAATGG
GATCCTTAATTTCTGAAGAACTGAGTTCCTTCNGGCTTATACATGCATAT
ATAGTTAGGCCCCGGAAGCAGCAAAGTCTTACAGAAATGGCAAAATCTTA
CTAAAGATAACTTACAGTGGAACGTTCCAAATGAACAACACTGCACTGAA
GTGCATTTGAAAATGAGGGCTCCCGAATTAGTCTCATCTAGGGATGCCTA
TCGATGTGCAGAAGCTTCTAAAAAGATTTCAATATTTTTATTGNTTTAAA
GANGGATTTATAAAAGGCAAATAAAAAGCTTAAGTGACTAANTGATAAGA
AAAATTAAGTCTGCTAACCTTTCGGCTTAGTTACTATCCCACCCCAAAGG
CGAGAAAGAAAGCTATCCTAGATAAAGTGTTTATAAAAGGTAGGCCCTCA
GGTAAAGCGGGCTTGCCTCTTTTTTCAGATCTATCCATGCTGAATNCANG
CATAGAGAATGCTTTNTTTGCCCTATTCNTTAGTGGGCTCTATCTACCCT
GAACTCAGTAATTTTAGCTAAGAAACAGNAGNTAAGTTNAAAAGACCACC
TATCGAACTAAACTGTCTCAAAATACGCCTTTCTGGCATTTAATTGGCTA
TCTTGAAACNCTTTTGTAAAANAAATTTAAATCTATAAAGGAA
>rnd-4_family-633#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
ATAAATATAAAANACTTTTTTCTCATTTCTAATCTCTTTAAAAGATAATT
GACTGTTTAAAGCAAAAATAATAATAATGCATTGTGGGGTTTATAACATA
TGTAGAAGTAAAATGTATGACAANAATAGCACAAAGGNCGGGAGGGAAGA
AATGGAAGTATACTGTTGTAAGNTTCTTACGCTATATATGAAGTGGTATA
ATATTATTTGAAGGTAGACTGTGATAAGTTNAAGATGCATATTGTAAACC
CTAAAGCAACCACTAAAAAATTTTAANAGNTATAACTAATAAGCCAACAG
AGGGAGATCAAAATGGAGTAACAAAAAAANATNANTNAATTCAAAAGAAG
ACAGAANAGAGGAAAAGAGAAAAAAGATCAGATGGGAAGAGCAGAAAANA
ANTAGCAAGGCNGTANATTTAAACCCAGNCGTANCAATAATTATGTG
>rnd-4_family-4125#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
CGTTCGCGCCAAAGGCTTGAGACAGTTAGCGTGACTCGCCNTATTTTGGC
TGCTGGACCTATCTGCANTCCCCCCTCTCGAGGGCTGTCGAGATCAGAGA
AAGGTCGCGGGCTGAGTCACTGAGGCAAAAACAGAATACAAAGCAAAGGT
CTGCGGTTTACGAGGACATTGTGCTGTCTGCTTTCATGTCCCCATCAGTC
TCTGTGTAAGCAATAGTCTTGCCGCAATTGAGATGCCTGAGAGGGGCAGA
GACCCCTGCCCATATTTTCCCAGGAGCTAAGCCTTTGTTCTACCTCCTGA
TGGAAAACAGGATTAACAAGCCACCTTAAGGGCACCATTGTTTGCTTGCG
CTGTGTATCTTTGAAAAACATAAACTGCTTTGTAAGCTATTATCACAAGC
CCCTGATAACTATTTTTATGAAGTTTCTATTCCCTTTCTGTTTACCCTTT
TTCTGCTGAGATAAAGTAAATGTAACAAGAAAAAAGGTATAAAAACTGTA
ACTTGCTTACCTTGTGTACTTAAGTATTTACAATTGTTAAGTACTTACTG
GGCGTAACTTACTTGCTGGGTGTAACTTACTTGCCTTGACTTACTGGGCG
TAACTTACTTACTGGGCTTAACTTACTTACTGGGCGTAACTTAGTGGGTG
TAACTTGCTTACTGTAACTTAAGTATGTTGATCTGGCGTAAACAACATTA
ACGTCAGGAAAGTATANAAGCTGGAACGTACCGCAAAAATAAAATTGCTG
CTTGGACATAGCCCAAGCCAGCCCTCCAGACTCCGCTTTCCTTTTTTCTT
TTACTTCCGCGCACTCTCTCCCTCAGGTTGAACGAGACATCTACGTTGGC
GGTCTCGGGGACTCCCGCAGGTCGGTAGCCCCCCGGCAGACGTGCCGGAC
CCCAA
>rnd-4_family-127#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 20 )
ATCGCTTGATGCTTGTCAGTCATGGAAGTAAAAAAAAAAATACATGTATT
TAACTTTGTAGNTTCTTTGCTTNCGTGATAAATGCCTAACATTGCGGCTA
TAAAGTCAAGAAATAACTTGAGATGATGGCTAGCTTTGTTCCTATAATGA
GCNATTCAAGCATAATTATTAAGAACGAGTAAATTAAATAAGTAAGGGGA
TAAANGTGTAATGGAANTNTTTANCGATAATTATGCTTCATTTTCTACCT
TAAAAGTTTCAAAATTCTTTTCGGTAATTTAAAACCTTAAAGTTACGTTA
AATTAAGTGATAGNTATTCATNAAATGTCTGAGTCATTTCTAAATGAGTT
AAAATACTGAAACATTAATTGCTGAACATAAGTTTAAAGTTTACATACTT
TGGCATCTTGTTTTTATACGGTATAGAGAAGCTAAATATATTTGGGTCTG
TTAATAAACATAGAAATTGTATGAAACACATNTTTCTAAAATTATAAAAT
GGTGTTCATCCACAAAACGCTGGTATAAAGACAGTTCAAAATTGCTTACT
TCCTAGGTTTTCACTAGAAATTAAGGTTACTAAGAGTTAAAAATTCTAAT
TAGTATATGTAATTAAAACTAGAAATAATAAGGGAAGCAACTCCCATGCA
AAGAAAAAAATAAGAAGAGTGAAATGATATAGAAATATGCGTTTTTGTTA
AGGNNAAAGGAGTAATTTTTNTCCTAAAGTAGAATGACTAGNAATTGGTC
TCAAAATGAGAAAGAAGAAAGAATAGGGCAAATAACTGAAGGGATATAAG
AAGGTTGTAGAAGGTTTGAAAGAGAATTCGGAAAGAAATCTTATTTGTGT
GGTCAAANCTGGATTAAAATTAGGATGGATTTATTTATAAGGTTTNTTTA
AAAATGAGCTTTAATATCAANAGTACACTGACGCAAAACTAGAATTTGGT
TCTCTCTGTTGAACAACAAGGTTTTCNTGGAGTATNCTTAATAGGAAATA
GTAAAAAGCTTTTGTTCACCTTTTGAGTAA
>rnd-4_family-5197#snRNA ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TCCTTTTGTAGTTCATAAGCGTGATGATTGGGTTTTCACGCNCATGTGTG
AGATGTGCCNCCCTCAAACCTTGTTACGACGTCGGCACATTACCCGTCTG
ACGTGAA
>rnd-4_family-2841#Simple_repeat ( Recon Family Size = 23, Final Multiple Alignment Size = 20 )
CACATATATATGTGTATATATACACACACACATATATGTGTATATATATA
TATATATATATATAGAGAGAGAGAGAGAGAGANAGAGTGGTA
>rnd-4_family-522#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
AAATNATGGAAGTGACTTTGGAATCGGGCAGTGAGTAGAGGCTGGNAGAA
TTTTGAGGAACATGACAGAACGAGCCTAATTACCTTGAACAGACTNTTAG
TAGAAATACGGTGTTAAAGCTTGAAGGAAGTGAGGAGTATGNTAGAGAAA
ACCTANATTANCCTAGAGAAAATCGCNGTNAACAGACTGTTAGGTAGAAA
TATGGACGTTAAAGGTGCTGCTGGCGAGGGCTCAGAAAGAAGTGAGGAAC
GTGTTATTGGAAACTGAGGAAAAGAGGATCCTTGTTATATAGTGGCAGAA
AGCTTAGCAGAATTGTNTCCTGCAGTCGTGTGGAAAGCAGAATTTATAAA
CAATGTATTTGTGCGAAGATTTCCAAGCAAGTGTTGAAGGNGCNGTCTGC
TTTTTCNCTGCTTNTAGTAAAATGCAAGAGGAGAGAGATAAATTGAGGAG
AACTGTTAAATAAAAAGGAGCCAGGACTTGATGATTTGGGAAATTCTCAG
CCTNTCCAGATGGCAAATGATGCTAAAGTTAAGAGATTCACTTCTGCAAG
GAAAGTATGNTCTAGAGANAAAGCCGAGGATGTGGCTGNANANCCTTCTA
CTAAAACCTTTTACTGGAACTTTGAATTGTAGATCAAAATGTACANAGTA
TGAAATTTATTATCTTAACTAGTTGTAAGTGAGGGTGTAGTCTTTTGCTA
CTGCNCAGGAAGTATAANGGTTACAGTATTCAGTCACACAGAGGGCTCTT
TGAAGAGGCATGTGACTCGCGGATCCCCTCAGCCGTCTCAGCAGAAGCCC
GAAATAGAGACAAGATTATCCAGGAANAATCTGTNGACGAGCCTCTTTTC
AGGGGTCCCTGTAACATACAGGGAGACCACAAGGTTCTTGAGAATTTTAT
GCCAGCGGAAACACTGCCAANTTGGACTGAAAGGGACAGAGANNACGAAA
CGAAAGAAGGCNATCGGGCTCCCGAAATTCTACGGGCAGGAAACAGGCCG
ATAAAACTACTCAGCTGCAAGCACGTCTTCGAAAAAGGAAGAATGACTCC
AAGGNCGGAGCCCCAGGNACAGAGGGGATGCAGGCGCGGAGGGGAGCTGA
GCCACGGAAGGGCTCTTCCCAGGCCTTGNAACCTNACGGNATTTGCCCAT
GAGACTTTGAAAGGGATTGGGTGGTGTCTCCTTTCTGAATCNNAACGTCT
ATAACTGTTATCCTACGCCTGTCCCACTATTGTATGTTGGAGCANANAAC
TTGCTTCCTTAGTTTCATAGGTCCACAGATAAGAGAAATTNTGCCCCAGG
ATGATTCCAATCAGAGTGTCTCACTCATANCTGATTTAGATGACGAGATT
TTGGACTGACATTGTTTTAGCTGATGANATTTAGATGAGATTTGGACTCT
TGAGCTGATGTTATAATGGGNTGAGACCTTGGGGACCTTGGGATCGGGGT
GAATGTATTTTGCATGTGGGATGGACACGAATCTTCGGGGGCCAGAGGGT

>rnd-4_family-1111#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
ATGTTAGAAATAATAGTTTGTTTTAAAGACTTTCTTCAAAGCCTTCTTGC
TTTTTGCTAGTAAC
>rnd-4_family-1233#LTR/ERV1 ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
GGTTCAGGACACGCTACCCCAAAATATGGCACCTTGGCATTTGAGAAAAC
AGCAGAAGCAGGAAGGTCACTCTCACCTTCCC
>rnd-4_family-1313#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 20 )
GGAGATCCTGGTTCCCAAAGCGGGTTCACTCTGNGCGAGGGACTCAAGGT
CCCATTGAGNTACAACTCACAGCTGCCGCCAGGATACCTTGGACTCCTNT
GCCCAGGGACCAGNAGGTGAGAAAAGAGTCGCCATNCTGGCAAGAGTAAT
TGATCTTGATNAGCAGGAGGAGGTAGGGCTGCTTTTATACAATGATGAGG
GAAGAGATGAAATATGTGAACACCAGGTGATCCACTTGGGCGCCTCTTGG
TACTTCCTTGACCCATTGTAACTGTGAGCGGACGTGCAGCAATTGCCCTG
AGAAGGGCATGATTACCAAGGGCTCAGACCCCTCGGGGATGAAGGTTTGN
GTNACNCCACAGGNAAGCCACCAAGACCNGCGGAGGTNATAGNACTGAGG
ATCTGAGGTTTTAGAATGGAGTAGGAAAGGAATGAGGAAATATGNGTTGT
GTGTCCTCCTAAAGACCAACTACAGCAACGGGCGGCTGTAGTTNGTTCTA
CTAACCTCCATTTCTCTAAGTTTCCCCTCAGGAAGGGAGGCCCACNGGAA
CCCTGGGGAGNTGCTCCCTANATNTGTTTCGAGGATCAGATCCATGTGCA
ATGCAAGAATGG
>rnd-4_family-1964#SINE/MIR ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
TCCAGGTCACAACACAAGGAAGTAATACATTTCTGTGATGAAAATACAAG
TCTTGAGGCTTCTGATTTTATCATATGTCTATCAAAATTCCCCACCTGCC
AATGTTAAACCATACAATGTAGAACATAAAAANCATACANCCTCTGAAAC
AGAGGAGAGGGGAAAGNTCAAAACTCATTTGAACTTTCACAATCATATTT
TATCAATTCATTATTAGTCCACTCTTATCATTGTGGTTGTCATTAATAGA
CAAGACGTGTTGAGCAACTAGTACCTGCCAGACCAAATATGAAACACTTC
ATTTGTGCTGTTTCACTAAACCTTTACTTTCAACAAAGGTGCTTTTAAAA
ATCAGAATTATGAAAGTACAGATGAGAAAATGGAAGTCGAGAAGGCATGA
GTTGCCTAAACCTGCTCCTAAATCCTAGCCTTTTTCCAAGGCCACTCTAC
TAGACTTGCTTCTGTGGGATCTATTGTATTCATAGTCAGATACCAATAAG
GCCAAGAAGATGAGTACTTTTGAGTTCTTCTGNGTTTTGGGGAAAATTTA
AACAATGTCTCCCATTCTCCTGAAAGCATTTAATGTATTCTGCCCATTCG
ATAAGCAAACAGGCATGAACGCTTATCTGGGACGATACCACTCTAGTTTC
TCTGTAACAGTACATTTTGTGTAGAATATTCCTATCTCAAATGCTGATCC
TCATTCTGTTACTTACTGGCTGAATAACCTTGGACAGGTGACTTAGCAGC
TCAGACACTCAATTTGGTAGTCTGTGAAGTGGGGTTGACAATAGTTCCAA
TAGTATAATAAAAGTGGAACCACCTGCCGAAAGCACTTGACATGGTTTCT
AGAACATGACTAGTAAACCACACATATTAACTATGATTATTTTTTATTTT
GATGATCCTTGTGACCACAGAATAGAGGTTATCTACATTCTACATAGAGG
AAACTTGTTCTAAGATATAAAGTGTTTTGTGTAATTTCACCCAGCTTGAT
AGAACAAAGATAAGAAAGCACGTCTCCTAAATGTGACAGGGCAAATTTTT
GTTACTAAAATCTCCAGCAACACTTTGAGGAGGTGGGTCTTGGTAGCTGG
AGAATTCTGAAAGTAGAAGTGGGGAGAAGCTAAACTGCTCATCAGAAAGG
GATGAGACATCAAGAGACCTGAGGATGATTCAGAAGTGAGAAGAAATAAG
GGCAAGGGAGAGGGAGAATATGTTCAAAGGGATTTGAGAAATTTGCTCCC
CACACACAATGTAAACTCCCTCTCCCTTCAGCCTTCAGAATCATTATGAA
AATCTAGACTACATACAAATGCCTATGTGTCTACAAACTATAAAAAAGAG
CTAACTCCTGTATAAACATGATAAGGGTGAAAACAGTGCATACAAGGGCA
GACTTCATCTAGGCATCTCAGGGGAAAGCAATGGTACCCATGCTGTATGT
TGGGTGAGAAAGAGGAGAGGTTTTATGGAATTAGGTTGCATTTATGGAAT
TAGGTTGTATTTATGGAATTANATTGTATTTATTAGGTGTGGCTAAAGGC
AAAAAGAGGGAGTGGGGGAGAAAATCACCCAATTTTGCACGATCTGAGAA
AATCCGAAAAAACCGTTTTGGTTTCCAGGATACCATTCTTAGTATAATCA
GCTTATAAAGTAGACATATATTATTCATTCATAAAGCTGGCCGGCCAACC
TGCCCCAATGCCTAGAAGACACAGGTACACACTCCCTGACAACCGTTGGA
GGAACATGGATGATAGAGAAAGGAGATGACAGAGTTAGAACTGGTGAATT
TTTATGACTATTCTTAGTTGGCTTTCACCATCCTAATAATAAGCAAACTA
GGGATTTCCTTATGGCACGCTGGAGAATCATGTAATCCCCTTAGTTCTGT
CCTTTGCTTTTTGCCAAAAATAGAACTGATACAAAACAGAATCTGTATCA
GCTGCATGTTTGCTGAGATTCAAACGCTTGGATTATTGTGTTCAAAATCC
CATTTGCTGAGATATTGTTTGCTTTCATATATTTTGGCCTGGGCATAGCA
ATAATTTCTTCCACCTGCTGGCAGAAGGTAGCAAGAGAGATGGAGAGAAG
AGGTAAGGGCAGCAGGTGGTCAAATAAAACTATATTAAGGAAACTGGTTT
CGCTTCTTAGGAGACTGAATAAATACATCTGTGCCATGCTCCTCTGGAAG
AGGCAGTCTCCCGGATGCTCCATTTATGTCCTTCTCTACCTAGGCCTACC
CAACCCATTCAAAATGTACCATATACAGAGCTAGGCGGNGTGGGAAAAAG
ATAAATGAAGTCAAACAATCTGGATGTGAGCCCCATCTTTTCCCATNCAT
TAATTGTGGAATTGCAAATGGAACCCTTCCTCTCACCTATGAAATAAAGC
CGAGT
>rnd-4_family-1356#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 19 )
AAACAACAGNACCTCTGGGANNNTTAAAGGCGTTGCCCCTCAGCAATCTT
GGTAAGAAGCCCAAGGTAGAGAAAACTTATTTAAAAGAGNTTTGTGGGTG
TGGCTTTTGTCTAATGGAATGAANCCCAANATTCGTAGGAGACTCACAAA
GTTTTTGAAGAGAATTATATTCGGCAGAAACACTGCCAGCTTGGACTGAA
AGGGACAGAGCGAGTACAAAACGAAAAGAGGCTTTCGGNCCCCAAACTTC
TACGGGCAGGAAGCAGGCTGAGAAAACTACTCAGCTGCAAACATAGGCCA
CTTCTCATGAAAAAGGAAGGATGACTCGGAAACGTGGAAACAAGGAAGCC
CAGAGGGCGGAGCCAAGAAGCCACGGAGAATCATTCCCGGACAGCAGTAC
TGAGTCCTAATCAAGAAACTTCCAACATNTGCCCAGCTGGATTTCAGAAT
TGCTACGGACCAGTGACTCCTGTATGCCTCCCATTTTTTCCTCTTTTTGN
ACGGGAATGTCTATAGCGGTTATCCTATGCCTGTCCCACCATGGTATGTT
GGGCGGGNGAGGGGAAGAAATTAATTTGTCTCTNTAGTTCATAGATCTTC
GGATCGAGAGGAACCGGACCAGAGGAACCTCATCCGCACCTGGGCCTGAT
TTAGATGATGAAATCCTGAACTTCGAGCTGATNCTATGTTACGGGATGAG
ACTCTTGGGGGGCCTTGGGAAGGGGTGAATGTATTTTGCATGTGGGAAGG
ACGTGAATCACTGGGGGTCAGAGGGCAGAGCATGGTAGCCAGTTTCCAAG
AGAACCCCAATGCCCCCGGCCTCCTGGTATTCGTACCCTCAAGTA
>rnd-4_family-948#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
GGGGGAAAGGGAGTTGTTTAATGGGTATAGAGTTTCAGTTTTGCAAGATG
AAAACGTTCTGGAGATCTGTTNCACAANAATGTANTATACTGTACACTTN
AAAATGGTTAAGATGGTAAATTTTATGTTATNTGTATTTTTACCACAATT
TTTAAAATTTTAATNTACGGNAATGACTAATAGAAAAAACTAAAATAAAA
GAAAATATGTTCCAATNATGAAATACATGTAAGAATAA
>rnd-4_family-2895#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
GTTATGGTATGTATATTGTTTTCGTCCACGGTTCCTGGCTCATAACTCCC
ATAGCCCTTGTTACAGTCTTTTGTTATAATGTTGGGTGCGTTAGGCCTCA
GGAAACAGAATCTCCTTCTGACCTTCTCCTGCCCTCCTTTCACCTGCCCC
AAGGCAGGACTCTAATCTTCCCCCGCCTTTCTGATTGTGGGTCTTAAGAC
CCTTCCCCAGAGAGGGTCCCGCCCCACACT
>rnd-4_family-1841#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
TGTGAAAATAAGTAATTCAAAATCTAAGCTGTTGGAACTTCAAAATATTT
TGAGCCTTAAGGGAATGTGATTATGGACCTGAGTCACATGAACAGCACTG
TACCCAGGCAGCTGTAACCTAGGCAGCTGTAACCTTTGTTTCTCTGATTA
TAGATTAGCCTTCTTCCTTACCTACATTGTTTTGTAAAATGTTGTAAATG
ACTGAAGGGCACCAGGGAAGACCCCTTCCCTCTTCACTGTTGATCTTCAT
TACAGATTAACTTCCCCCTTACCTCTCTCACACAAAGACNTCATGACTAT
CACATTGTCTAAGATGGAATGTTAAATATACTCTTAAATTGGAAAGGAAA
TGAAAACAAGCTGTAAAAAACTAAATTGTTGTAACTCATAAACCAGCCTT
GTATAGAAAATGTTGTAATCCTGCTAAATTTCCTTGTTTTCTGCCTATAT
AAGCAAGACCTTAACTTTTAACTTCGGAACGCTGACCCCATTTCTTTGGA
GTCTGTGTTTCCTGGATGGCCATTCCCAGCTTTTCGCTTGAATAAACTCT
TTAAAACTGGATTCTGATCCTTTTAATTATTTCAGGTTGACA
>rnd-4_family-4436#LTR/ERVK ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
GCAACTGGATGTGACCGCCTTGAATTTATGCGTGAAGGAGGAGAGCTCAT
CAATTTTCGGGGAATCCCGGTAAGGGACAGTCCTGACTCCCATCAGGAGG
ACGGGACACATGCGTAAAATATCAGAGGCTAGGTTATCATGGGTCAAGAA
ATGACCAAAGAGCAGAAAGTATTTTTNAAAACAGTGCAACAGCTACTTAA
GGCTATCCGGTGCACTGTAGAGCCTGGAGCTCTACGCAGCTTATGCTCTT
AATTCGGCAGGAATGCCCTTGGTTTNCTGATCAAGGAACCTTAGATTTAG
AGTTATGGGAGCAGGTAGGTCGCTGCCTGAAAAGAGGATATGAGCAAGGT
CATTTTACTAATGTTACTATTTTGACCACCTGGGCGCTGGTACGCTCTGC
TTTGTATCCTCTTTATCTGCTAGATTGTGGCGAGTCAAACCGCCCATCTT
CTCCATCTGAAGGGAATTCAGGAGATTTAAGGAGAAGGAAAAACAGGAAC
CAGAACAACAGGGAGAGACTTNTCTCCCCGCTTCGTTCTCTTCTATGGGG
AATAAGGAAGAGATTTTTTTTCTAGTGAGGATAAGGACTGACCGCAGCCT
TTTCCTCCACCCTTAAANGGACCTGCATCTGTTGGCCCCGTTCAGCCAAC
AGCGCCTCCCGTCCCCCTTAAGGAGATTGGAGGCCGCCCAAGGGACGGTT
CTTGGATAAGATCCCCGGTCAGCGAACATCTATATGACCAGGTGGCCGCA
TCCCCTTAACAAACTTCCCTGCTGGAGGAGTGTCTCCGGGAAGGAAGGAA
AGTGGCTGATTATGATTGTCTTCCTAATATGCAAGTTCTCACTTCCTACT
TCCAGCATCGGCCTTTCCGGCCTTGTCTTTTTCTGTTTCCCTGGAGTATA
AGGGAAAGTTGCATNCCGCCTCCTGGGTTTTATCCTAGAAAGCTCTGGCT
TTCTCGCTGCCCACAGAGGCCTGGGGCAGGAGAGTTGCTAAGATGTCGTG
GAGTGCCCATTTAGTCACTGGCAGTCTGGGCAGGTTGCCCCTTTCTGGGT
TTGCGGTGACGGAGGGGAGGCCGAGAGGCACAGACCGAGTCCCCGGGTGG
CTGCAGGCAGCTCCAGCCCGGTCCTAAAAATCCTCCTCGCCATGATCACG
TACCTTAGTAACTGTGCCCAGAAAGCGGTCTGCTGCTTGCTGCGCTGCTG
CTTTTCCTACTTCTGCCCTTCCCTGCCACCCCTCGCATGTCTCAGCTGAC
AAGCAATTCCTTGTCTTCCCTGGCCCCCTGGGGAAAGGGCTAAGAAACAG
TCCATGTGCACCCACCGACCTTACTAGCCTAAGGTGGGCAGAGGAGTGTG
GAGCAGCCTAGAGTACAGAGCTCTGGGGGAGAAGCCCGCTAATAGGGGGC
GCTCTCCCGTAGCCATATGTTAAATGCTAACTAGGCTGAGGNGGACGAGC
TCTGCCAGCTGCTGTCATCTTCAGAAGATAGACGCAGCAGTAAGGAATGT
TTGCTTTNCTTTTTAATAAAATGCTTAAAAACACTGTGGCTAGGAAACTT
CAAAGCAGACCCTGTGCTGCATGTCTGCTCCTCCCCTGAGCCTCTCTGCT
TGGGGGTGGTAAAAATAATAAAAAGCCCAGCATATTTTCAGTACCTTACC
TNACAGGGTTGGCTCCAAGCGTAGGTGGCCTGGAGGACGAGGGNAGTGGT
CTTCTCCCAGCCTGTTACCCTCTTGCCTCCTGCCTCCGCGCTTACACACG
CACTTTACCACCTGGTCATTCTCTGGCCTCTTGCTGCCACTTGTCGTCTT
CCTTCCTTCCTCTCAGGGTAAGAGTAGCAACAGGTGGCAGGCTGTTAAAA
AGAGAGGCTGCCTAAGGAGCCCGGAGCAGATGGGAAGAAACCGGCCACAG
TCCCTGCTTTCCCAAGCTCACTTCTAAGACATTCCAGCTAAAGGCTAATG
CAGGAAAATGGCCAGCACCTAAGGACNTTTAAAAAAGTTTTTTGGGTTTC
TTTCTTCTTTCTTTTTTTTCACACGCTTAAGCTAACTCAATGCAGGCTTA
TTATCCTGGCGACTTGCAGTCACGTTCTAATGAACTTTCAAGGGCCAGAA
TATGGTAAAAATCACTTAAAATATCCATCCCTTCCATGCCTTAGTTTAGC
AGGTAGGCTTTATCTTTTGCCATTTCTGTATTTTATGTGCTGTGTACCTG
TCTCATAACCCCTCTAAACATATACAAAAGACCACAGATTTAATAGCTTC
TCTTCTCATAAAGGGGCACCGACGTTGCGTCCAGTTGTCNGAATATGACC
CTGCTACTCTTTTCCTACCATTAAGCAAGGAACAATTTCATACTCTCCTA
GCTTGTGATCTTGATTGGCAAGTAGCAATGGCTGACTTTATTGGTAATAT
CAGCTTCCATTTACCAGCNTCTAAGCTCCTGAACTTTTTACAAACTGTGC
CTGTTAAATTTGCGTCTATTGTTGTCTCTGAGCCCTTGCTTCATGCCACT
ACTGTCTTTACAGATGGTTCAGGAAAAAGAAAAACCAAAAAAGACAGCTA
TAGTGTGGCAAAATGCCATGCAAAACTGGCAACACAAAATCCAGGAACAT
TTTAAAACTACGCAACAGGCGGAGTTAGGTGCCCTAATATTGGCCTTACA
AACTTTTCCTCACCAAGACATAATATAGTTAGTGATTCTGCTTATGCGGT
GTATAGCATTACTCATTTAGATCTTGCACATGTGAAGGGCATTACTAATG
AACCTCTACTAGCTTTGTTTCTTGCAGCGCAAGAGCTCCTCTGTGCCCGT
CGTCACCATCTTTATATCACNCATATTCACTCTCATTCTAGGTTACCTGG
TCCCTTATCAGAAGGGAACGCTCGAGCTGATGCTCTGGTACGACCACAAA
TGTGGTTTGCAGACTCTCCTGCTTTTTTGCGAGCTCAAGCTGATCGTGCT
TTTTTTTTCATCAGAATGCCCGCAGTCTTAAACAACAGTTTCATTTAACA
CTTGCTCAAGCTCGCATGATTATTAAAACTTGTCCTAATTGCCAACGGCA
TTCTCTCTCTCCTTTTTCCTTAGGGCTTGGTGCCAACCCACGAGGTCTGG
TGCCTAATGCTATCTGGCAAACTGATGTTACTCAGTNTCCACCCTTTGGA
CGTTTTAAATTTCTCCACGTTACCGTGGACACTTATACAGGCTTAATACA
TGCTACCCCCCGGACAAGAGAAAAAAACTAAAGATGCAATTGCTCATTTG
TTTGAATCTATTATGACTTTAGGCCTTCCACAAACTATAAAAACTGATAA
TGGACCTCGCTATCTTAGTGCTCGATTTACATATGCATTGCAACTTTAAC
ACATACAACACAAAACTAGCATTCCTTATAACTCAACCGGTTAGGCCATT
ATTAAACAAGCTCATCAAACTCTTAAAGTATATCTTAATAAACAAAAAAG
GGGGAATATGGGGCTCTCTCCTTGAGAACAGGACCTGTCATTGGAGAATC
AACCAGCAATGACGGTGATGACTCGGAAGGCACCTGACATTACCTGAGGA
CAGCTAAAGAAATTGGATCAACAAGCAACTATCCGGCTTGCCGCCATGGA
AGCCCCTGCAACTGCAGAGAACCGGTTTCTTATGTATCTGGCGGTAATTG
GGGAAACTTCTGAGAAAGTAAGACAGACATGGATGTTAGGGTGGCTGGTA
ATTCTTGTTCTTTGCCAAGTGGGATCAGCTCAAGAACATGTTTATTGGAG
TCATGTTCTAAATCCCCCTGTTTTTAATGTTATTACATGGTGGGATGCTG
ACCCGCCTTTGTCATCTAATGATACTTCTTGGACAGGAGGTCGACGGATG
CCCCTGTCTTACCCCTTAACTGAAAATTTGAGATGGATTAAACTTAATGA
CTCCTTGACTTTATTGTCTAGTAATCCCCCTCTTTGTTTTTCCACAATAG
CACATGATAAGTGTGTTACTCTCATTCCTCAGGAGTATCTTTACTATCAG
CCCAAAAGGGATGCTAAGCTTGCAAATTTGACCTTTATTTCTGCCGTTAC
TACTAATCTTACTGAGGTCTCTAATGAAGCTACACAAGTGCCTGATCTTC
CTATATGCCGTCCGAGTAGGGACTGGNGATATAAGTTTGAGGCTGTCCAG
TGGTCTCCGTGCAGACAGCCTGCGCCGCGCCAAGGGCCTCTGTTTGATAA
TGACACTTTACTTGATTGGGGTCCCCATGGTTATCTTATGTCTGCAAATC
AGACTATTGGATTTGGGAGTCCCTCCGATAGTTCTATCACCTGGTCAGAG
TATGGGCTTTCAGGACCAATATTACAACTAAAAGGGAAACAAGCTTTAAG
CCCTGCTCATACCCAAATTTGGAGACTAGGTCTTCCCTTTTTTGAACAGG
TTCTTTCACATGGTGAGTACATTACTAGTGGTGGCAACTATACCCTCTTT
TTGCACAATAATGTTACTGACACAGTCCCGATTTGTACTATGCACCCTTA
TATACTTCTGTTTGGGCAAGGTGTTCCTAACATAGAGCAGAATCAATCCT
TTTATAGTATTAAAGTCTCTTCCAGTAGCTGGTATGCTACATGCTTGTCT
CATCAAAATGTTATACAGTTAAATATAACCTATGTCATGATCTTAANACG
GCGAGCAGAATTGTGGCTGCCTGTANATTTAACCCGGAACTGGGAAGGAG
ATTCCACCTTGCAGTTATTTAGAAAAGCACATCTGCAAGGGGCTTATCAC
GACCATTTGTCTTCTCAAATTTCCACTCTTGAGTGTGAATTAAAGAAACA
ACTTGAAGAATGGTCGCAGCAATTACAAACAAGTACCCTTCAGCAATTAC
AAGAAGGCTTTCAATGGTTAAACCCAAACACTTGGTTGTCTGGGTTAAAC
ATACGCATTTGGGTGATGGCCGCTATACTTATTCTTTTTTGTATCTGTTT
GCTAGGCATCTGCAGATGGCTCTGTGCTGCCACCCGACGCATCTACGACC
AGAGAAGAACGATAGAAGCTTACCTTGCATTGGATGACCAGCATGCTCTA
AGAATTAAAGAAGGGGGAGATGTAGGGGGCGCACGGCAACATATTCAAGC
TTATGTACANGGCATTTGAGGTCGGGGCATGGAAAAATACTGAGGCACTG
TGTATGTTATTTGTGCATGGGAATGAAACTCCTTGACCCTGAAAACAGGA
CAGGGAGTGGAGTGTGTGGTGTGATAAGGAACGCTGAAAACAGCCTCCTG
AGAATGCAGTTTGAGTGTGTACAAGGTCACAGGTGCCTCAGCAACCCACC
TCAAATGACCATCTAGTGGATGTTTGTAGTTAATACAAGCCCTTTCAATA
AATACTTGGTGGACGGATGCTGGGGCGGACTCTCTCGGAAGAGCTACCCC
CAGCCCCGCTCAGCTGGAACTGTCTGAGTACTTCGTTCTTGGCGTTCACT
GCAAGCTATAAGCTCTGC
>rnd-4_family-2118#LTR/ERVL-MaLR ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
CTAAGTGTTCGCCAAACCCGTTTTTCCCTTCTTCCCGGGCACAGAGCTAG
ACTACATTTCCCGGCTTCCCTTGCAGTTAGGTGTGGCCATGTGACTGAGT
TCTGGCCAATGAAACATGAGTGGCCTGGCCCCNATCCTCTTCCTCTGCTA
GCTTGATGCAGGNCAGCACAGNGACCTTGGAAGCTCCTCACGTGTGAAGA
TGGTGGAGCCACAANATGGAAGGTGTTTGGGTTGAAGGAGAGCTACATGC
TGNTCAGGAACGCCCGTTTTGGATTTNACGTGAGCAAAGATAAACNTCNN
TCATGATGCTAANCCACTTAGATATTTTGGGGNATNTTTTGTTCTTGCGG
NAATGCTCATTAGCCTCTACTGTCANAACANAGACCCTTANAGTNNGTGC
ATAAAAGTAAATNCANTCCATGAAAATTCATATGATG
>rnd-4_family-622#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 19 )
AAAANCAATNTTNTCCTTTCATTTTTNNTATTAAATAGCNGTTTATTAAT
CANGGAGAAGAAGCATNCATGCAGGGGACTCCAGCCTGCTTCGNTGNCAN
GGATCCTGAAAGCACTCCCACGTAGGCATTAGCCCAGGTGNAGTTCTTCA
CCANAGCANAGCNAGGCAGAATTCCACAGCNNATTCTTTGCTCAAAGAAT
GGACACTGAGAAGGAGCNAGTGCTTGTNGTCCAGGTGTCGGAAACTCANT
AGCATTGACTNTGGGAAGCTCGACTTGCNNTCCCTTTGTGTGGAAGCCTG
ACNTGATCAACCACGACATGCCAATTTATTTTGGCACTTCGAATTTGATT
TTTGTCTCTCTGTAACTGGTTTCAGTAATCTTGTTTTCTCGGAACTTGGA
TGGTGGGAGGTGTATGCATGTGAGCGAGTGTGGAAGGGCCCAATTGGGCT
CACCGGTTATAACGTGTGGGAACCGTAAGTCCGTTANAGTGNACCCCTTA
TTCCGAGCAAATCGAGGGGCCAGCTAGGACCAGGGGCAATCTGCATAAGG
CTAAAGGGGTGTGCCCCCGCAATCTAGGGAATGTTGGGGGAATAACAAAC
TCTCCAATGCCAAGNAGCTTCTGAAACAGGGGCGATCCTATCGGTCTGAA
GCGAAAGTGCAGAGAGNGTGTGTTGCANCGTAAGAGGCTGGGGACTGAGA
GCGGAGTGCAGACTCCCAAACTGTAACATTGGGCAGAGTCAGTGAGCAAC
CCCTTTCCCTTTNTGNGAGTGCTGTTCTTATCCTAACAGAGGGAGATGGG
TAAGACNCAAAGTAAATCCACTCCACTGGGGACCATGCGAAAGAATTTCA
AGAGGGATTTTGGGATAGTGGAGATTNTGGCAGGTCACNGTGACACTAGG
GAGACTCAGAACTCTGTGTGANGTAGNCTGGCCAGCATTCGAAGTATATT
GGCCCGCAGAAGGGAGNNTAGACAGGTCCTTTGTTTTCAAAGTATGGCAN
NAGNTTACAGGCAAGCCAAGACACCTTGACCGATTTCCATACATAGACTC
TTGGTTACAGTTAGTTTAACCCACCCCNCACAATGATTAACGGGCCAAGC
AGCAGCAGTGTTAGCAAAGGAACAGGCAGTTAGGGAAAGANCTTGCTCCA
CCAGCCAGGGGATGCAGNCTCCTAAGATCTTGGCTGACTNAGCACCAGAA
GATTCCCTCCAATGTTACCCTCTCCTTCCCCAGAGGCATGGCCCCTAGCT
CCAAAGCCAGAGATCTCAATGCCTTCACAAGTTCTGAACACNCCTAGACT
ACCCAGAATANAAAGAAAAGGANGTGTGGCCTCAGTNGGCATCCCTTCCA
TAGCAGCCCACTTCTCAGGGGNATCCTCTCCCTTGGTGGCTTNTTTGTGG
CCAGAGGCTGGAGTGCAAATGCCCCTGAGAGAGCAGTNATANATGGGAGT
AGGTGAGGACAGGCANATTGTGNAAAACCGTTTCTTCACGTACATACATT
TTACTTCATCTCTCCTTAAAAACCGGAAGANTAACAACCCATCCTACACT
GACAGAACACAGGCTTTAATTGGCCTGATTCAAACTGTCATCCTAACTCA
TAATCCCACTTGGGCTGATTGTCACCGGTTGGTCGTGTATCTTTTTAACG
GAGATGAGAGGTAGAGGGTGCTCCAGGAAGCGTCTAAATGGCTGGAAGAG
CATGTTCCAGTTGATTATCAGAATCCTCAAGAGTATGTGAGGGCCCAGTT
ACTAGGAACTGACCCTCAGCGGGATCAAAATACCCCTGACGGCATGCAGA
GGCTGACTGGATACAGAGAAGTCTTACTTGAGGAATAAGAAAAGGAGAAC
CAAAGGTCANAAATATACACGAGATAATCCAACTNACGCAGAAAAAAGAT
GAAAGTCCGGCACAGATCTATGAAAGACTATGTAAGGCTTACCACATGTA
TGCTCCTTTCGATCCTGAGCACCCAGAAAATCAGCNCATGGTAAACNTGA
TNAATTAGTCAGAGNACCAANGACATCAAGAAAAGTTGCAGAAATAGGTT
NGGTTTGCGGACATGAGCACCATGCAGTTACTGGAAATAGCTCATCAAGT
ATTTGTAAAGAGAGATACAGTAAGCTGCTGAGAGAAGGAGCGACACAACN
GGTGAAATGCTAACCTGCTAACCACGGCTACCAGAGAAACCCCTTCAGNG
GGGCAGGGCAANGGAGGCCCTGGAAGGAATACCCAGTATGACCGACCTCG
CCTACAGCAAAACCAATGNGCTTATCGTAAAGAAGTGGGGCACTGGAACA
ATACGTGTCCGCAGTTGACAGGGAACCAAGGTAAACCCAAGCAGAAAGCC
TCAGGCAAAGATGAAACTGCCCTNTTTAGTCTGTCAGAATGGCCAATAAA
CTGAAGGGGACTGGGCTCNGATGCCCCCAAAGAGCCCATGGTCAGAATGA
AGGTGGAGAGCAAGAACATTANTTTCTTAATCAACACCAGGGTGGAGCAN
TTGNTGGTAACTCAATCTGTGACCCCTTTGTACAGAAAGGCAGTAGACAT
AATTGGGGCAACTGGAGTTTCAGAAAAACAGNATTTTTGCCTGCCGCGGA
CCTGNTCTGTGGAGGGCCACGAGGTTATGCATCAGTTCTTGTACACGCCA
NATTTCCCNTACCCCTTTTGGGTAGAGACTTGCTGAGCAAACTGAGAGCT
ACTATCACGTTCGCTGATAAGGGCTCCCTGCAGCTCAAACTGCCTCAGGC
AGGAATTATTATGGCTCTCACAGGAGGAAGAGTGGAGACTCTTCCTGACT
GAACCAGAATGAGAACCAGNCACTGCACTAGCAAAGTGATGGCCACAGGT
CTGGGCAGAAGACAGCCCGCCTGGGTTGGCTGTAAACCAAGCCCNGGTGG
TCATCGAAGTAAAGCCAGGGGCNCANTCGCTTTAAGAGAGGCGGTAGCCA
GTTCCAAGAGAGGCTCTNGAAGGCGTTCAGGTCANACCAAGGGAAGTNCT
TGAAGGCATCCGNGTCCATCTCAGGCACCTGAATANTTATGGCATTGTAG
TTCNTTGCCAGTCTCCATGGAACACACCTCTCCTGCCTTTCCCCGTGCCA
GNGACCAGGGANTATAGACCGGTGCAGAATATCTGCTTGGTCAAACAGGC
AACNGTGACCTTGCACTCCAACGTGTCCAATCCCTATATGTTGCTAGAAC
TGTTGCCAGCTGACCTGAGCTGCTTCACTNGCTTAGACTTAAAAGATGCT
TTCTTCAGCATCAGGCTGGCCCCTGAAAGCCAAAACTATTGCTGATTTCC
AGTGGGGAGATCCAGAGTCANGTGTAACAACACAGCACACCTGGACCTGG
CTTCCACAGGGGTTCAGGAACTCTCCAACCATCTTCGGAGAAGCATTGGC
CCAGGACCTCCAGAGGTTCCGTGCTAAGGGCCTTAGGTTGTGTGCTGCTN
CAACATGTGGATGACCTTTTGCTGGGACACCCAGCGGCAGCCGAGTGCGC
CAGGGGAACTGACTTGTTACTCGAACACCTGGAGACCTGTAGATACAAAG
TNTCTAAAAGGAAGGCCCANATTTGCCGACAACAGTCGCGCTATCTAGAG
TTTACCATCTAGCAGGGANAACGAAGCCTAGTAATAGAAAGGAAGCAGGT
TAACNGTAACCTGCCGGTACCTAAGGATTCGAGGCAGCTATGGGGAATGA
AAGGCATTTGA
>rnd-4_family-245#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
TCNTTCTCCCGGTGCTCTTTCGCCTTGTGTTCTCCTCCCTCCAACAANTG
CGNCTCAAGCTTTTTGAGTTGCATTTANAAACAAAAGAGGAGAGAATGAG
GGAGATCTGTGGGGATCGCTCCCGTGTGAGGCCCCTAGGAAATGGGCCTC
GCCATACGGTGAGCTTGAGCCCGGACACAGATCCCCGGTTGGGGGAGTCG
AGCTGAGGGAAAGCAGGAACCGAGAGAGGGACTATGCTATTCAAAATAAT
TAACAGACATTACTTTATGGATATGAGGACNTGGGAGGCATTGTGTCCAC
TTTCGGCTCCTTACGGTTTATTGCTTCATTGTGTTCATTTTGGATCCTTG
CTACATTCGTTGTAAAATATTAACTTCAGTATTTACAATTGTTAAGTACT
TACTGGGCGTAACTTACTTACTGGGCGTAACTTACTTACCTNNNGCGTTA
CTTAGTATACTTACTGGGCGTAACTTACTGGGCGTAACTTACTTACCTTG
TGACTTAAGTATTTACANTTGTTAAGTACTTACTGGGCGTAACTTACTTA
CTACTGGGCGTAACTTAGTGGGCTTAACTTGCTTACCTTGTGACTTAAGT
ATTTTGATCTGACGTAAACAACATTAAGCAGAAAAGTATATAATGGAACG
TATTGCAAAAATAAAATTGCTGCATGGGCATAGCTTATGCAGCCCTCCAG
ACCTCGCTCTTTTCTTTCTCCTTTTTTCCGGCGCACGCTCTCTTCCAGGT
TTGGGACCCTCTCGCTGGACGAGATTCCCGGGCTCGCGTTCAGTTCACAA

>rnd-4_family-2145#Simple_repeat ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
TATATTTATAGATATATANANAATTTATATATACATACATGTATGTGTAT
ATACATATATATATGTACTATACATATATATACATACATATATACACATA
CATATATATGTAAACAC
>rnd-4_family-2497#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 19 )
CACTCTAAAGAAGTACATCTAACTGCCGTTAGATAAGAATAAGGACGAAG
ACCGATCTTAACTGCTTCCTGCTGACAGGGGCGCTGTTTTGGGAAAACGG
CAGTCAGAGCTCCCTCAGAGGCCTATCTAAGGGTCCCCGGCAGAAGGGGC
CATCGTCNGAGGCTCCGGTTGCATGACCGTTTGGAGTTTGATGGCCTGAA
GGCAAGAAGAGACAAACCAGGTTATTAGAAAACATGTATCAAAACGAAAC
AAGGGAAGGGGTAAGGACAGCTCAAAAAAATCCCGAGGCCTTTTACCAGT
TTGCACGGGGAGAGGGAGGCCAAAAGCCCGACTGGTAAAAAAACTTTACC
CTTTTGCCGGCATGTCGGGCTTCTGGGTTCCCTTCCCCTGAGCCCAATCC
TAAGCCAACCAGTTTAAGGTTTGGGAAATTAACTTTTCCCAGTTTGGAGG
ATGCATCTGAGGGGAGTATCCTGTAGTACGGAGACACAATTACCTATCAG
TGAAGAGAGGACAGAGGAGGAGAAAGGAAAAAGAAGGTTCCTTTTTAAAA
GAGTCCCAGGGGTTCGGGATGCATTCGAAAGGGGTACAGACTGAAGATGA
ATGGCTACCCATCTAGAAAGAGGGGAGCAGGCATCCCTGGTTCCCTTCTC
TTCCTAGCANATACCCGGGGTACGTGAGGGAGAGAGGGAAGAGCATCCTC
TTTCCCTCNTCCGTCCTTGCATCCCTGAGTCCCAGCAACCTTGGCAGGTN
CCACCATGAGTGCCAAAGCGGCTTGCACCCATGAAGCAGGGAGGGCCTGG
AGAACAGGAATCATCCGCTCTCACCTATGCCTCTATCCCTGCTACCGTCA
GTAGCCTTGGAGTTCCCTAGACCTCATTTATGCCATGGATACTAACGTGG
CCTTTATCCATGAAACGGGAAGCTTGGGGTTGGCTTAATCGGCAGGAATC
AGCCACGCTCACCTGTGCTGTGCCTTTTAACCTCTGTTGTCGTCTGCCTC
TGGATCCCTCAGATCCNGTTTTCTTTCCTAGGGCTTTGACCTGAAGCTTG
AAATTGAGTCTGGGACAAAAATGTGTCTCTGGGGGCGTTNCATGGACTCC
CTATCATAAGCCGAATGCTAAGGTGAAGCTGTGGAACTGAGTCCTCCTCC
AACAAGGGAGAGAAAAGGATGTCTTGTGACACGCCCAGATAACTGGCGGC
TATAGTTATGCCTGCTAAGATTTGGGTGCATGGTGCTTGGCTTTGGTTAG
CTCCCTTGGTCTTACTTTCCCAAAAAGGAAACCTCCGGGTNATGGGCACC
CTATTTATTCCATCACCTGGCAGGATTTGCAGGATAATTGCCCAGAACTA
GAATATTGATCCAGATTTCTACATTACCCATCCCTTTTGTTCTTTCTGAG
CTGCAGCCGGAGATCGCTGGTTGGTTCACAGGAACAAGCAGGGTTAGTCT
AAAATGTAGGCAAAAACTTAAAAACAACTAATGAGNTTAGAATTTAATGA
CAAATGTATGATAAGTTTTGAAACATAATTTCTCTCTCTCCAGTCCTCAT
TTTTGTTAAAAAAACAAATCATGATAGGACTGAGTTGTTTGCAAAATAGA
CTTTAGTCTTATACTTGGCCTGATTATTTGCATAAAGTGCAGCAAGAATA
ATTATTTCTACATAGGCCTTTTGGATTGGCTTTGATGGAACTCTGTTCCA
CAAGGAATCTCAGATAAGAAC
>rnd-4_family-1448#LTR/ERVL ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
AGATATTAATTTATTGCCTCTCGGCTCCAAATTCACCCTTTTTGCCTGCT
CTGCGAAAATGGAGNTGGACCCTTTAAATATTTTCCCTTTGCCAGCTGGC
ACAATGTTAAGCTTTGTCAGTAGGGCGCGCTGGAGAGACACTGCAGGAGG
AAATGGTTTGCCTTTCCGGGCTAGTGCGCTTGCTCGGCAGGCTCCAGCGC
AGGCCCCACAGGCGGCACGCGGCACGGATCAGNANTTGCCTCGCGGCCAG
CGGCTTCCCCGGCACGCTCCCGGNGGCGGTNTTGTAGCAGCGCCTCAAGC
GAGATAGCNCCCTTGCACCCTAGAGGTCGGATTTNTGGCGAAGTTCCAGA
GAGCTTTTAGACTTTCAGCAAGTTCTATCGGCACGGCACCACANCGACTT
CTCCGCCACCCGAGAGCCACTGCGGTTCCCTCTCAGCCCGGGGNCAGGAG
GGACGCTCTNTCTAGGGCTCCTTATATCTGGTACTNTNCCTGTATTCTTC
AGAGTTTTCTTTACTCTTACTAGCCAANCCCTCGTTATTCTAATCTNCTA
TTANAGTTAATAATTCTTTATATTAAACTTTCCCTGTTCAAATCACTGTG
TGGTTTCTCTCTCCGACTGGACCCAGACTGACAC
>rnd-4_family-551#LTR/ERVL-MaLR ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
ATATGGCAAAGGTGAAGAGATTTTGCAGATGTAATTAAGGTCCCAATCAG
TTGACTTGAGTTAATCAAAGGGAGATTATCCTGGATGGGCCTGACCTAAT
CAGGTGAGCCCTTAAAAAAAGGTCAAAGAGTCACAGATCTCCTGCTGGCC
TCGAAGAAGCAAGCCAACATNAATTCTATAGCTNCAANGACGTNAATTCT
GNCAAGAGTCACNTGGGCTTGGANGANGACTCCTAAGCTCTGG
>rnd-4_family-5294#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
TTTCCCATATGACTTAGGTAAGACTCAACGGGTNCCTCCCTTGTTTACCT
ATGNCAAGGCCAGACACAGACCCTCCAAATTCCCGTTCTTTGCCTCATAA
ATGATTAGCTGAACCGTTTCGTCCCCACTGGTCAATCTGNACAAAATGCT
TGTTAACCAAACTTTGGTTAAGCTTCTCTCCTTCCCCAGGCCCCTGAACT
TTGGCCNACCCTCAGCCTGAGCCAGCATACAACCCCTCCCTAACGGCCCC
TCCCGAGAATAGGCGACTCTCAAATTCCCCATCTATCCACTTCTGTCCAA
TTACCACCCTCTTCATCCCACTTCCCCACACCTAGTTCTTTCTAGCCTTG
TTTACTCCTCCCTATAAAAGAAAAACCCTTTTGCCTAACCCTGAGATGCT
TGCAGATCTTACGGTCGGAGCGTTCTCCCTATTGCAATAGTCCCTCTCCC
GTACCACTTTTCCCTACNTGCAATAATCCTTTCGAATAAAGTCTCTCCTT
ACTAAGTCCGGATTTGTTTTATTTGAC
>rnd-4_family-917#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AGTCTTATCTGAGATTCCTTCTATGGAACAAAGTTCCATCAAAGCCAATT
TAAAAAGCCTATGTGAAAAATAATTATTCTTGCTGCACTNTATACAAATA
ATCAGGCCAAGTATAATAAAGCAAACCAGTCCTACCGTGATTTGTCTTTA
GTAAAAATGGGAAACTGGAGAGAGAAAAATTATGTTTCAAAAACTATAGT
ACACCTGTTGTTAGATTCTAGTCTTGCCTAATGTTTTTCAATTTTTATTA
TTTTCTACAGTTTGGACCGAATTCTAATTTTTTCTTGGCTACAAGTCTTC
AAAATAATGTTTTCAATTTTTTTCTTCTTTTTTTTTCTTTCCCATTTTTC
CTAATTTGGAGTCACTGAAAACTAAGCTGTGCTTTCTTAAAGCCCTGCGA
ACTGAAGCTAGACAACTTAAACTTCAGAAGAAAATAACAGCAACCTATTT
ACATACATAAGCCACTTTCATACCTGCCTACTGATGTATGGACTTCAGAG
TAATGCGGCCTATATCAATTTTCCAGGATTGTTCTTTTGTTGTTGTTTTT
CTTCCTTTCTCCCCTCTATTTTCTCTTCATAGGACATGAGACTTCACAAC
CTGCTAAAAATGAGCTTTCCTAATAACTCGGGACCTACCCGTCTAGGAAT
AAACCATCCTAGCCATGAGAGATCAGACGAAACCTGAGACCAGAGACTCA
TTTTCTTCTAAAATGCTTTCTCCAAAAGATTTTAAAAAGAAAAGGTGC
>rnd-4_family-1206#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GAAAAATGNGCTAGTAGCCGGAGGGAACATGGNATAAAGAGAGGATTTTT
TNATAGAAAAGGAGAAATAATAGCACGTTTGTGTGCTGATGGGAATGATC
CAGTAGAGAAGGGAAAATAATGATGCAGGAAAGAGAGAGAAGAATTTCTG
GAATAATGTCCTTGGAAGGTNAAGAGGGGATGGGATCTGGTACACAAGTG
GAGAGTTGGCCTTGGCAGCAGGAGCACAGACAGTTCATCCGTAGTCACAG
GAAGGAAGGCAGAGCGTATGGGCACAGATGCACCAGTGAGCAGATGTACG
GTGGAGCCTGTGAAGTTCTCTTCTGGCTTCTCTTGTTCTCAGTGAAACGG
GAAGCAAGGTCATCAGCTGAGAGTGAGGATCGGAGGAGGTACTGGAAGTT
TGGAAAAGTGTGTAGTTGTCTAGGAGAGTGGAAGANTGAATTGGATATCT
GCGAAACGCAGGAAGGACTTTTNAATTAGTGGTCATGAATTTAAAATTGG
GANTCCTAATGGTCTGTATTTCCTTCAGCCATGCTCAGCTGTACGAAGAT
GCAGGTATGGAGTAGGNAGAGGGTTGAATTTAACCGTGGTTGTGGTTTTG
CGTCGAATANAATAAGTGAGGGGCAGGGGAGCT
>rnd-4_family-458#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
TGGGCGGGCCCCTCCCCCATGNCCGGAGAGAGAGGGAGCTGAAAGCGGGG
AGACGGGCGGTGCGGCTGGGCGGGTCCCTACCCTCCCCCACAAACCCCAG
AGGGCTGAAGCNCTAACTCTAGCGGGTTGCGCAGCCAGTGCCACAGTCTG
AGCTGAACCCTGAATGATCCAGCCCTGTGGAGGAAGGGCACAACCCACCA
TTAGAGGGGTGGGACTGGGCTACATGTTTTAACAAAAAACACAGGAAGCC
TACGTAGCAACGGGACGGCGTTCTTGACCACCCAGCAGCGCCTCCAGGTC
AGCGGAAGAGGCGGGCCTAATCTCCCAGTGTAAACAAAAAAGACACAGGA
AGCTTCCCTAGTAACCTGAAGGAGTCCC
>rnd-4_family-877#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GAGTCCTAATTAGGGAAAAGGAGTCAGGCTGGCGGGAGCAGGGGAAAGCA
AAGAGAGAAAGCAGATAAGCTATAAGTCTGCCTTTCTTCATGGTCCAGGA
CACATAGCCCTCCTGCGCAAATAACTCACAATCTTCCTGCGCCCAGCTAT
CACCAGACACCTGGGAGAAAATGCAAGTTAGCTCNCTGCAACCTTGGCGT
TATCAGTACTGCACGNAGCTCTCTTCAGCACAAGCACCATCCTATAAAAT
CCCCAGCAAGCCTTTGTTTCCTTGCAGTCAGCTCCTCTCCTGCTGACCTG
CCCGTTGCNTCCTTGCAACGTATTTTCCTACTTTCTCTAATAAATCTGCC
TTTCTTTACCTACAACTGTCTTGGTAAATTCTTCTTACCCCCGCACCACC
GGCCCAGATAGTTGCC
>rnd-4_family-688#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
AGATAAGGGAACCTGCACAGGGCCTTGTCTGGGCACGCCCGCAGCGGACT
GGGGGCCCGCCTGCGCACTGGGAGAATGGGGTGGAGCCACCGGGAATTCG
CGCCTTNTGCAGGGGAGGAGCCTGCCTCTTCAGCTCCTGTGTGGTGGCCT
GGNATTCAATCTGTGAGGCGGGAGCCTGTTAGCAGGACCCCTCTCGCTTT
GCTGAGAGCTTTCTTTTCGCCCAATAAATCCCGCCCTNCTCACCCTTCAA
TGTGTCCGCGTGCCTAATTTTTCCTGGTCGTGNGACAAGAACCCGGATTT
TAGCTGAACTAAGGAGCAAAAAATCCTGCAT
>rnd-4_family-3152#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
TTCCCCCCTCCCTTTTACAAGAGAACCCTTAATCCTAAGGGTTGCAGAGG
GACGAAGATCCATCTTCTGTAACTTCTTCAGGCTGAATAGGGGCGATGAT
ATTCCTGCCTAACTATTAGGGTCTCTCGTATTCAGGGTAGAGAGGAGCTC
AGTCAGAAAGCGTCGGTATGGTGAGGGCCATTCATAACTCCGAGTTCTGA
CAAAAGGTGATATCTGGAAGATTAGTAAGTGTTCAATTTAAGAAAACATT
CAGTAAGCTTATCCTGCATTCCTACACAAAGAGTACAACAGCAATATATT
CCACAACAGTAAAGCAAAATAAGTAAAATTATCCCAAGTAAACTAAATAA
GAAGGCTTTCCATGTTTAATTTTATTAGACTCTAAGTAAAATTATCCCAA
GTAAACTAAATAAGAAGGCTTTCCATGAACTGGGCAACTGTTGGAACCAA
GCTGATATGGGGTTGCTAGCCGATTCCAATATATGCCCAGAATTAGAATA
CTGATCCGGATTTTTACATTACCCATCCCTCTTGTTTCTTCTGAGCNGCA
GTCAGAGATCACTGGTTGGTTCACAGGAATAAGCAGGGTTAGCCTAAATT
GCAGAAANAAACTTAAAAACAACTGATGAGACTGGAATCTAATAACAAGT
GTACCATAGTTCTTGAAACATAATTTTTCTCTCTCCAGTCTCCCATTTTT
ACTAAAGACAAATCATGGTAAGACTGATTTGCTTTATTATACTTGGCCTG
ATTATTTGTATAAAGTGCAGCAAGAATAATTATTTTTCACATAAGCTTTT
TAAAATTGGCTTTGATGGAACTCTGTTCCATAGAAGGAATCTCAGATAAG
A
>rnd-4_family-1451#DNA/MULE-MuDR ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AGTTACATCATATTGGGCAGAAATATCACCTTGTTATTGTCTTTATNCAG
GAGAAAATGNATTTCAATTGAATCCCCAAACCATAATGACGGATTCGGAA
TTAAGTGCGATCAAGGCTTCTAAAAGTGAATTTCAAGNTGTTNCCAATAA
AGTTTGCTTTTCGATTCANCCCAACGCATTTGGCGGAAAATTCAAATGAG
TGGATCGGCCATGCNATACGGCAACGACGAAAACTTCAGTTTAAAAACGC
GTCATTTGCCTGCATTGGCATTCCTTCCAGCTGATGACATTCCAGGAGCT
TTTAATGAATTAAAGCCATATTTGCCTGAAGAAGCCAGNGAAGTTACTGA
CTGGTTCAGAAATAATTATGTGCATGGTAGGATAAGAAGACCTNAAGTTG
CTCACCAGTATTGTTTCCACCAAATCTGTGGNCTGTNTATGAGTGCATGT
GGAATGGATTTCCACGTACCCAAAACAACATAGAAGCATGGCGNANAAGA
TGGGAAAATTTAATAGGGAATGCTCATGTCGGTGTACATCGAATCATAGA
NAATTTCAAAAAGAGCAGTGCCACGTAGAAAATGAATGTGAACGTATTCT
CCGAGGAAAGCCATGTCCTAAAAGAAAAAAAGCAGCTATTCATCATAATG
CAAGACTTCAAANTATAGTTAATGATCGTGAAAGTCAGNCAGTTCTTATG
GACTATCTCCGTGCAACTACCCATAATCTTATCCCTGTAATACACTTTTT
TCATATGTCAACTCATTTTTATTTTTTTTTTCAGTTTTTTTAACACTGTT
TTAAATTGTCAGCATTATTTTTTACAATTCGCTATGCTATGTATTTCATC
TTCGCATCATTTCCAATACTGGAGGTATAAATTGTGTAGAGACTTTTAGA
GAGTTCTAATTCGTTTTATGCATNTTTTGCAAATNTGACTCCACGAAAGT
NCATTATCACAACGTTGACTTTGTGTGTAAGCGTTGTGCATGTATGTAAA
AATGTTGAAACTTCCTCAATAAATGAAGAGATGTCCTTTTTGTACATCCG
CATTTGTGAAAGATAAAATTTCTCGAGATCTCGGCTCTTTGGGCGACTGC
ANNTGTGGTGGTGACCCATCGCGGTTTTTGATCGATCTCGTCAAAAGACT
TAGGTTGTNCGTCACGGTATTTCAGACGACCGCAGTTATAAAGCTGGGTG
CACACAATTACCAACCATAGTGATATGCGTTTATACATTTCCCTTTTTGA
CCTATTTCTTCATGAATACGGTTCATCTGCTCATANNTGTTATAGCCATG
TGACTGTCGTTAGAATACCTGAGTGTTTATGCTTGCAAAATATATATGTT
ATTATTGCCTATTTTATTGTGTAAAGTGGCTATGAAGTGTTCTGTCGTGT
TTTTATATGTTTCTCAAGTAAATTCCCTTTTAAAAATGTAAATAAATATA
TTTTAAAGAATTTTTAATTAAATGTTTTTTTCCAGAATTATATTTTCGGG
ATTTTGATCTTTCGGGATTTCAACATTTGGGATTATGGCATTCGGGATTG
TGTCTTTGGGGATTATGATCA
>rnd-4_family-300#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
CAGGTAGTTACTCTATGTTCACCTTATCNTATGTAAAGTGCCGATTTACT
GAGCGCGAGACGAATACGTAATTGACTGTTCCCCTACCTGCTCCTTTTCT
CTTGCAACATGTGGATTTCAGTACGTGACCACACCTCCCTCTTTCCCCTC
CGGCCTCTTTTCCCCTTTTAAATACTGAAGCCCTCAAAATCATCTTTGGA
GAAAGGCACAGACCACAGACTGTTTCTGTGATTTCTGTGTTCCTTTCTTC
CGGGCGTGTCCTTAACCTTGGCAAAATAAACTTCTAAATTGATTGAGACC
TGTCTCAGATACTTTTTGGTTTACA
>rnd-4_family-160#Unknown ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
ACATACATAATACATATANCTTGAACAACATATATATATATTATATATGT
ATATATATATAATATATACATATAGTATATATGCATTATATGCATATATA
TACACATAGTATATATGTATTATGTACATATAATATATATGTATGTGTAT
ATGCATATATATATAAATATATATTACATATGTATATATGTAATATATTA
CATTCACATATGTATTACATATGTGTATATAATACATATATATAATATAT
ATTATACGTAGTNATACATATGTATATGCTATTATGTATACATACGTAAT
ATATATGTATATAGTATATCTTATATATATACGNNNTCGTATTATATACA
TAAANAATATATGTATACANGANATACAAANATAATACACACGTACATAA
ATACA
>rnd-4_family-643#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GTGACATGGTAAAAGCCCCATAAAACTGCATACCTCAACCATACCTCGGC
TTTCTGTTGAAACTGCTCTCTGTAACCCTAATGTGACAGGCAAGCAGTCC
AAACCCACGCCATCTTGGCCCCTG
>rnd-4_family-2130#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
CAGATTGCATTTTTCCAAAGATGGCCGCACCGATATATGCCCTATCCCAC
AGTTCTTACAATGTGACAGCTTGACATTCTCCTCCATTGAGAGGTAGAGT
CTAATTTTTCTTTCGCTTAAGCCTAGGCGGACTTTTATAACTGCCTTAAC
CAATAGAACGTAGGGTAGAAGCGACTCNCTGTGACTTCCGAGGGCTAGAT
ATAAAAGGCGATACAGCTTTCATCCGGCCTTCTCTCCCTTGGGACACTCG
CCTTGGGAGCCTGAGCCGACGTGTAAGAAGTCTGGCTACCCTGAGGCCGC
CATGCTGGAGAGACCACATGGAGAGACCACATAGAGATAGAGAGATGCCC
GAGGAGCCCCAGCTGTTCCGGCCTCCAGCTGTTTGAGTCTTCCCAGCCCA
GGCACCAGACATGTGAGTGACNAAGCCTTCAGATGACCCCAGCCACTGCA
ACTTCAT
>rnd-4_family-766#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
TTTTGGCACGCAACGCGGGGGCTCGAGAAGCGGTGAGTGAAATGGGGACT
CAAAACCTCTCACTGTTGCTTCTAAGCCTTTTCATCCTCGGACTTCTGAG
GGTGGGGGAAACCATGNCCCCACNCCTTGTCGCTCCCGGGCCTTGGGGGC
TTTTANGGCCCTTTCCTTCCTTTTTCGGGANCGACCGGCGAGCGGCAGCT
CCCGCTCCTCTNCCCTCCGTGCCGGGGCTGGGACGCATGGCCCAAGCGTC
CCGCACAGCCGGCTGGCTTGTTCCCAGCCCTCGGCGCCCACAGCCTTCCC
CTTCCCTGGCCAAGGGGTTCAGCTCCATCGNACAGTAATTAAGCTTTTCT
CCCTGGTGGAGGAACCACTTGCATAAGAATAAGAGGTTCTTCCCCAGGCA
TTTTTAAACTTTTTTTTTTCCTTTCCTCTTCTCCACCCCGTCAGCAGTTA
ACCTTTAACAGTTTTTTTTTTTCTTTTAGAAGATGTTTTACTAGGCCAGG
CCCCGNAACTATCACTGTTTATTCTCTGCAAAGTTTTGGTTGTGAAATCA
AGCCTCCATCTTGTTTCACATCCTGGGGGCATGGCTNGTAACTGCTTGGC
AAGGCTTTGTTTAGCGATCCTGCCTTAGGGGATGAGCCCTCTCTGGTTTG
ATATCTGCACGTTTTCCTAGCCCTGTCTCTTAAAGGGCCCCACCCAGNGA
CTGGGTTTCATGTTCGTCTTTGCTGTGGTGTGTGTGTAGTGTGTGTGATG
TCTGTNAAAAGAGCTCTAATTAATTTGGCCTAAAGAAAGACAAGCGCTTG
GATCTAATATTTTTTAAAGGGAAGTTAAAAGCTGTGGTACCTTTCAGTTC
ACGTGACTTTAATCTTTGAGAAATAAAAACAGCCTTAAAGATTATTGGTA
AAATGCAGGTGTCATAAAATGTAAAAGGTGAACTAAGTATCGGTCAGATG
CAAGGTTTGCTAAATGTTTTGAGGTTATAAACTGCTTTTTGGGTTTTGAG
AACTGTTCGACTTGCCGCCTCACAATTGGTAAGGCCTGGGGACATATGGA
ACTAACCGCGCCCTTAACTAATGGAAGNCAAACCTTGGTTGCANTTAGCA
CACAATTAAAGCAACTTACCAGGTTTTACCTTAAAGTTAAAAATTGCTAG
GAGTTACCATTATAACATGTAATTGAGACTACTGAAAATAGATTTACGTG
CAAGGTGTGTAAGAACGGTAAAATGGTTTTTTCAGTAAAAGGTTATAAGA
AGGCATGGAAATGTAAATTTTTGCCTAGGGTTAAAGGATTGTTTTAAATT
AGATAGGAAAAAGCTGAAGGTTCAAAGAAGTGGTGGAAGGATTGTGGAAA
TTAATCTTGCGGAAGAGGTTCTTTGTGTGAACATATTGGCTAAATTCAAN
AAACGGATAATATATGGTTTTTCTGTAAATTGAGCGTTAAAATAAAAGCA
TAACAAGGNTATTCTTCAGGCACTAATCTTCTCTTTAGCAAAATTCGTAA
AGGGTTATAAAAGGTTTTTGCTTCTTTAAAATTTCTGAGTCATCGTTTTG
GCAAAATAAATAACTTATGGTAATCTGGAATTCTATTTCATAATATCAAG
TGCTTTAAACACATTTAANAGGCTTCCCAAAATCAAACTTCAGTTTCAAA
ATTGTCTTTCCCGACGCCTGGCTTTTCGGATGGTCCAGAGGGCCCCTGGA
GCGTCCAGAAAAGAGGTAAACAGGATTATTTGACATGTTTAGGTACGTGG
GATTGCCAAAATGATGTTCAATCTTCTTTAGGTTATATTTTGGTGAATAA
TACTAATATATGTTCCAAAATTGTATGGGATTTCTAAAATTCTAATGTCT
GAGTATATGCTATCAATCATAATTAAGGTTATTATGTTAAGTTATTGTAA
ACCACGGAGATAACCAAACTTCTTTGTCAATTGTGTTTCTAACTGTAACT
ACCCTGGACATTTTGCTATTCACAGACAATTGTTGTCTTGTTTTGATCCT
TTTCAAAAGATGGTTTATAATNAGCTATAGGACTTTGACAGGTGCTCTCA
AATACAGGTTTCTGATAACTTTGGAGATTGTGACATTGGAATAAAGGAAA
ATNTACAGGACTCATGAAGAGCTGAAATGTTCACGAATATCAAGCAAAAC
AAGAGTTAACTAAATGGACTGAACTCAGAAAGCTGAAGCAACCTTTTGAC
TTTTGCTTGGAATATTGCTNATCCT
>rnd-4_family-552#LTR/ERVL-MaLR ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
ATGTGACTCAATTNTGGCCAATANNACGCGAAGNAGCAATCTNCTGGAGG
GGGAGGGATTCTCCCTCTTTTTCCTCTGGACGCTTTNGTTGTNTGGATGT
GATGCCTGGAACTGCNGCAGCAATCTCCTGCCATCAACCTGAGGATGAGG
CCAACCTCTAGTGATGGCAAGAGCAGAAAGATGGAAAGAACCTGGGTCCT
TGATGACGTCGTTGAGCCGCTGAATTAACCAACCCTGGAGCTNNNCTCTA
CCTCTGGACTTCTTGTTACGNGATAGNACGTTTNCTTATTGTTTAAGCCA
NTTCGAGTTAGGNTTTCTGTTACTCGCGGCCGAAAGCATC
>rnd-4_family-2303#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AAAAATTTGTTAAGAGGGTAGATCTCATGTTAAGTGTTCTTACCACAATN
AAATTAATATTATA
>rnd-4_family-1299#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TTTCTCAACTGGGTTCCCCGAGAGAATTAAGCCCTAACGCCCAAGGCATC
CATTGTATGTAATGAATTAACTTCTCTCCTANGCATCTAGAATGGTACTN
GTTATGTACCATCCTTGGGAGAATTGAGAAAATAGTCACTCAAATCATTT
TCTGTGTTCTGTGGTTCAGATGAGGAACCCTGGTTGAGAAAGGC
>rnd-4_family-745#SINE/MIR ( Recon Family Size = 29, Final Multiple Alignment Size = 17 )
AGTTCCCAGAAAGTGGGCAGCAANAGCACTGGTTAGGAACCTGAGAGNCC
TGGGTTCGAGTCCTGGCTCTGCCACCTGCTNGCTTGTGTGACCTTGGGCA
AGTCACTTCCCCTCTCTGGGCCCTGG
>rnd-4_family-2125#SINE/MIR ( Recon Family Size = 21, Final Multiple Alignment Size = 17 )
TTTTTCTTTANATNCCATTAATCACAATTTACNATGCTTTGAGATGGTGT
TTGTAGTGGTTAAGAACACGGGCTCTGGAGCCAGANTGCCTGGGTTTAAA
TCCCAGCTTTGCTATTTAGCAGGCTGTACGACCNTGGGCAANTTTAATAA
CCTCTTTGNTTTTCGATTTCTTCTAGNNTGAAATGGGGCTAAAAACGACC
TCATGGTATTATTTTTAAAATGTTATTTGAAGAATAAGAGATAATATATT
TAANTGCTTNGCACAGTG
>rnd-4_family-3121#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AAATGGGTGAATTGTATGGCATGTGAATTATATCTCAGTAAAGCTGTTAT
TTTA
>rnd-4_family-2570#LTR/ERVL-MaLR ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
CTCTTAATCTTTCTACAGACTTATGATCTGGAGACCTATAAACTAAAAAG
ACATGCTCTCCTCCACACATATGCAGTGCAGTGGAACAGGAACAGGATAA
CTNCAATAAACGCTCCCGTTCGGAAAAGGAAAGAATGAGAGACGCACAGC
AGTCACTGGTCCATAGCAATTCTGAAATCCCNCCGGGCAGACGTTGTGAA
GANTCCCTGCNCCGGGGGTGGGGAATGTTCCTTGATTAGGCCCTGATTCT
GCTCTCTGGAGGAACTCCCTTGTNCGTTGTTCTTTCCATGGTNCCTAGCT
CTNCCTCTTTGGAGGTTCTTCCTTGTCCACTATCCTCCTCTTGGCCATAT
CTGAAATGGGCGTTGGAGAATATGCCCTCCTTGGGAGCTACACGGCTTTC
TCAGCCTGCTCCTTNCCAGTNGAAGNCTGGAGGCCCAAAGATTGTTTGAA
GTCCTGGAGAACATCAGGGTCTCTGTTCCTTTGGCAGTTTAACTGTGTAA
AAAAAATGAGGTTTCTTATTTCATGCAATAAAAATTCTAGATGTTAATCA
ACATA
>rnd-4_family-743#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
AGAAGATGAAGTTCCTCTATCTGCATAAAGACCAAGACCCACCAAGGAGA
ACAATTGTTTNTTCTCCTCCGTTATCTCATTATCTATTGCAGAAAAGAAG
ACCAAGATGTAACCACACCTGAACAGACCCTTTTACAAGGATAANGNCTG
TCTCCCAGGNTCATTCAGNTTCCAAAGAGAACTATTTACAAGTTAATNTC
TGTTCCCGGATCCATTCATTCTCCCTAGTAATCATTTATTGCCCCTCAAC
AGAATTCCTTTTCTCTCCCCTCCCATAATGTTTTACCAGAATCCAGCCCC
TCCTTCTTTCCGTAATCTGTCAAGANGNTATATAAGCTTCTGNGCCCCAT
TGGGATGTTGGGTAATCACTCTGCGATGTCTCCCGCGTATACACGTTAAA
TAAATTTGTATGCCTTTTCTCCTCAATTAATCTGGCTTTTGTCAGTTGAT
TTTTCAGCGAACCTTCAGAGGGCAAAGGGCCAAGGCCCCCANANCANTA
>rnd-4_family-976#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
ATTTTGGGCCTAACTTCTGGTTTNCAGGAAATGCAGGGGATAGAAANAAA
CGTTAAACGNCGCCACGAGGAAACTAAGACAAATCCAGAACGTAAGCCCT
GGCCCGGCCATTTCCAAAAGTCAACGTCATGAAAAGAANAAAATAGGAGG
GACTATTCTAGATTAAAGGAGACTNAAGAGACACGACAACTAAATGCAAT
GTGTGATCCTTGATTGGATCCTGATTTGCAAAAAANACCAGCTATAAAAG
ACATTTTGGGGACAANTAGGGAAATNTNGATATNGNCTAGATATTAGATG
TTAGGGAATCA
>rnd-4_family-52#LTR/ERVL-MaLR ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AATGTTCTAGGGCTCCCAGAGGCTNGCTCATAAAAGGCCTCGCAGCTTCC
GCCTGGGCCTCTTGGAACACTCGCTCTTGGGAAANCTAGCCGCCATGTAA
GAAGTCCGACTACCCTGAGCTGCCATGCTCTGGAAACCCTGTGATAGTGC
TCCAGTCAATAGTTCTCAGCCTGTTCTCCCAGCCATTCCCGCCAAGGCGC
CAGGCATGTGAGTGAAGCCGTCTTGGATCCTCCAGACCAGCCCGNCTGCC
AGCTGAATNCCACCGAGTGACCTCNGTCAATGC
>rnd-4_family-1965#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAAAAGGCAAACTCCGGACTCTCTGTGAAGTGGAATGGCCAANNTTTGAA
ACCGGGTGGCCCCCAACAGGGTCAATGAACCTCACAACGGTTCAAGCCGT
GTGGCAGGTTGTTACCAGAAAGCCCCGGCATCCTGATCAGTTCCCTTATA
TTGATCCGTGGCTTAGTTTGGTTCAGAACCCTCCCCCGTGGCTCCGATCT
CGCGCCGTTCATGACCCCACCTCTAAGGTTCTTCNGAGTNAAATCCCCTC
CCGATGCCCGACCTATTGCTCCGGTGGCGCCCTTCTGCTCCCCCTGTGTC
GCCTTCCTCCGAGGAAGAGGAAAGCTATCTGCACCTATTACCCCTACCTT
ATAACCCCCCATTCCCCAAGGATCCCCCACAATTTCTTCAAGGGCACCTC
CTGTGGCCCCCCTGCCACCTCCACCCCCGGAGCCTTTGTCTCTGGCGGTT
TCTCCGCCCATTGCCTCCCGGCTATGGCCAGGTCAGAGGAAGCTACTCCG
CTCCTCCCCTTGAGGGAGGCTCCACTCCCGTCAGGCAGTGAGCGTTCTGC
TGCTCCGTTCTTAGTCTATGTTCCATTTTTCACCTCTAACCTGTATAATT
GGAGGGCTCAAAATCCTCCGTTTTCCGAGAAGCCCCAGGTCCTAACTGCG
CTGATGGAGTCTGTGCTCCAGACTCATAGGCCCACCTGGGACGATTGCCA
GCAACTCCTTCTTACCCTTTTCACCTCTGAAGAGAGGGACCGAATTAGAA
GGGAAGCCAGAAAGCATTTCCTTAGCTCAGAAGGGAGGCCTAAGGACGAA
GCCCAAGACCTCCTTGAGGAGGCTTTTCCTTCTACCCGACCTGAGTGGGA
CCCTAACACCTCGCGGGGAAGGAGGGCTTTGGAAGATTTCCACCGGTATC
TCCTTGCGGGTGTTAAANNAGCCGTCAGGAAACCTGCAAACTTGTCTAAG
ACCACTGAAGTTGCTCAGGGGCCGATGAGTCACCTGGAGCATTCCTAGAG
CGCCTCCGGGAGNCCTATCGAATTTACATCCCGTTTGATCCGGCGGCTCC
TGAAAATAGCCNTGCTANAAATTTGGCATTTGTGGCCCAGGCAGCTCCTG
ACANTCAAAGAAAGTTACAAAAATTGAAAGGTTCTGCTGGAATGAACATT
GCTCGCCTTTTAGAAGTAGCCCAGAAGGTTTTTGACAATAGAGAAGCTGA
AAAACAAAAGCAGGCAGCTCAAGCCGCTGACAGGGCAGCCGACAGGGCCG
GGAAAAGACAGGCAAAAATGATAGTGGCTGCCCTCCAGGGAACCAAAAAG
GAAGAGCTCCCATCCCAGAGCACCATTCGGAGGACCCCGGACCCCCACCA
GAAAAGCAAAAAGGTGAGCAGGCTCCCCTACGGAGGAACCAGTGTGCTTA
CTGTAGACAGACTGGACACTGGGAAAATGAGTGCCCTTTAAAGCCGGAGA
AGAAACCAGAACAAAAAAGGGTCCTCACCCTCCCCACAGCGGAAGAANCT
GATGACTGNCGGGACCGGGGCTCCTTTTCACTTGGCCCCCGGGAGCCCAT
GGTTACCGCTACTGTGGGGGGCCAGNNTGTATGAACTGCACTTTTAAATA
ATCCACACGGGGGGCTGAACATTCTGTACTACAGACACCCTTGGGCAGTG
TTTCTAACAAAAGAATGGCTGTACAGGGGGCTACTGGAGCTATTCAGGAA
TATCCTGTCACCCACTGACGTGAAGTAAACTTAGGTCAAAAGAGAGTAAT
CCATTCATTTCTAGTAGTTCCAGAGTGCCCCTCCCCCTTCTTGGGCGTGA
CCTGCTCCACAAGCTGCAGGCATCCATCTCCTTCTNGGCTCAGCAAACTC
ATCTCAAGTTAGGAGACACAGAGCCCCGCTCCCGCTCAGCTCCTGCTGAC
CATTCCTCTGTCAGAGGAGTATCTTNTAGTCTCATCTNCACCCCCNAGAG
AAAACCGAATTAGCCCTCTCCTANTGGATCTGCAAGCTCTTTTTCCCCGA
GTTTGGGCAGAATCAAACCCCCCAGGACTGGCAAAACACCATCCACCAGT
GGTTGTAGAACTTCTGGCTGATGCCCTGCCTGTTTAGGTCAAACNATACC
CTATGAGTCAGCGGGCTAGAGAGGGAATCAGCCCCCACATTCGACGGCTA
CTANGAGCCAGTATACTTACACCTTGCCAGTCTGCTTGGAACACTCNATT
TCTGCCAGTTCAGAAACCCGGAACAAATGATTACCGCCTGTACAGGGCTT
GCAGGAAGTTAACGAACGGANAGTCACAGTCCATCCANCCGTCCCTAATC
CCTACACACTGCTCAGCTNGCTCCCACNAGAACATACCGTGTACACTGTC
CTGGACTTAAAAGATGCTTTCTTTGCCATTCCTTTGGCTCCNAGGAGCCN
ACCCATTTTTGCTTTTGAATGGACAGACTCTGGTTCAGGAGACANAACCC
AATTNACNTGGACCCGGTTGCCCCAGGGCTTTAAAAATTCTCCAACTNTT
TTTGGGGAAGCCCTTCAGCGGGACCTNGTGGCATCCCCAGCCGTCCCAAC
TGTACCCTACTGCAATACGTGGATGATTTAACTGGCTACTGAGACTGCTA
AAGCTGTCTGCAACATACCAAGGACCTGGTTTATCTCCTTCAGGAGCTTG
GGTATCGGGTCTCAGCCTTTTCGGCTTTGTCTTTCCAGGATATGAACTAA
ACCAAGGAAAAAGTGCTCAAAAGGAGGCCATCTTGCAAATCCCCACCCCC
ACCNCCAAGAAACAGNTACATGAATTNTTGGGGGCNGTGGGATACCGTCG
CCTGTGGATACCCGGGTTCGCAGAAATTGCCAAGCCTCTGTACACCACTA
NAGGAGGAAGTGGCCCTTTAGTCTGNACTGACACGGAAGAGCAGNCCTTC
CAAAACTTAAAGAAGGCACTGACTGAGGCCCCTGCTTNAGNCCTTCCAAA
CNTCTCNAAACCATTTCACTTGTTTGTCCATGAAAATCAGGGAGTGGCTA
ACGGGGTGCTCACTCAAACCTCGGGGCCATGGCGACGCCCAGTGGCATAT
TTGTCTGAAAGACTGGACCCTGTGGCCTCCGGGTGGCCGAGTCGTCTGCG
AGCAGTTGCGGCAGCGGCAAGCCTAGTTCGNGAGGCTGATAAGCTCACTC
TGGGCCAGAAGTTAACCCTTACGNCACCACATGCTCTAGAGACTCTGCTA
TNAGGTGCTCCAGGCAAATGATGTCTAACGCCCGCATCCNACAGTATCAG
AGTTCGCTGTTAGATCAGCCTCGNTTAACTTTCTCCCCCACGAGGTGTTC
AAATCCAGCCGCTCTGCTCNCTGATCCAGACCTCACCGCCCTATCCGTGA
CTGCCAGGAATTACTAGAAACTACAGAGACAGGTAGACCTGATCTCCGGG
ACGCTCCTTTGGAAAAGGCGGATGCCACCGTGTTTACAGACGGTAGCAGT
TTCCTTGAGCAGGGAGTACAAAAAGCCGGTGCGGCCGTTACCACGGAGAC
CGATGTACTGTGGGCCCAGNCNCCGCCAGNCGGNACCTCNGCACAGAACG
CTNAGTTGGTTGCCCTCGCTCAAGCCCTNCAGTGGGGTAAGGACAAACGT
GTNAACATCTACANTGATAGCAGATACGCTTTTGCTACTGTACGTGTTCA
TGGGGCCATCTATCAAGAGCAGGGNCTACTCACCTCAGCGGGAAAAACTG
TCAAAAACAAGGAAGAGATTTTAGCCCTGCTCGAGGCTGTCTGGCTCCCC
CTACANGTGNCTGTAATTCATTGCAAAGGNCATCGGAAGGANNATACTGC
TGTTGCTAGGGGAAATCGAAAGGCAGACTGCGCCGCCCATAAGGCTGCCG
CTCTCCCGGTTACTCCACTACTCTGCTTCCAGCCATCTCTTTCCCGCAGC
CTGATTTACCTGACCACCCAGCGTGCTCTTCTGAAGAAGAAAAGCAGGCA
TCGGATCTGCAAGCCAGTAAAAATCAGGATGGNTGGTGGATCCTTCCAGA
CTCCAGAATCTTCCTGCCCCGGGCCCTCGGAGAGGCCNTAATCGGACACC
TCCACTCTTCCACCCACTTGGGAGAACAAAAAGTTGGCCAATTTTGAGAA
GNCGTTTAAAATCCCACGCCTCCAGGACTTAACTAGCCAAGTGGCCTCCC
GATGCACGGCTTGTGCGCAGGTGAACGCCAGGCAAGGCCCGAAGCCTGGA
CTGGGCCANCGTCTCCGAGGACGTAGCCCAGGAGAGAGGTGGGAAGTTAA
GTTTACCGAAGCGAAGCCACACCGGGCGGGGTATAAGTACCTCCTGGTGT
CGGTAGACACTCTTCTAGATGGACCGAGGCTTTTGCCACTAAGAACGAAA
CTGCCACTACGGTAGTAAAGTTCTTACTCAATGAAATTATCCCTCGCTAC
TGCCTGTTGCTATAGGGTCTGATAATGGGCCGGCCTTCATCTCGTCCATA
GCTCAGTCAGTCAGCAAGGCGTTAAACATTCAGTGGAAACTCCATTGTGC
CTACCGACCCCANAGCTCTGGACGGGTAGAACGCATGAATCGTACCTTAA
AAAGTACTCTTACNAAATTGATCCGGGAGACCGGTGAGGGTTGGACAAGN
CTCCTTCCTTTAGCCCTTCTTAGGGTCGGGTGCACCCCCTACAAGGCAGG
NTTNTCTCCTTTTGAAATCATGTGTGGGAGGNCCCCGCCTGTNTTGCCTA
NGCCGAGGGATACCCANCTAGCAGANATATCCCAGGCTAACNTGTTACAG
TACCTGCAGTCTCTCCAACAGGTTCGAGATGATGTCACCCAGCCGCTCGC
GCAGGAAGCGCGCCCCAATCCNGCTCTCGGTCTGACAAAATCCTGCCACC
CTTTCCATCCAGGTAACCTGGTATGTGTCAAAAACTTCCAGAAGGAAGGT
CTTGCTCCTGCTTGGAAAGGACCTCACACTGTCATTCTTACGACACCACA
GCCCTAAATGCGGACCGTATTCCTGCTTGAATTCATCAGTCCCGCATCAA
GA
>rnd-4_family-122#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
TATATTCCTAAAAAGATANGGGNAGAAAGCTTATTCANAGAANANAGAAG
AGCTCCTGGAAANTGAAACNATAGTTCCTGAAATGAAAANCAAAATTCAG
TANAGAATGAGTANAANATAAAGTTGAAGAAGGTGCTCAGAAAGTAGGTC
AGAGAGAAAGACACAGATAAAAAGACAAGATAAGAATCAATCCAGNAGAT
CCAANATACGAANAGNATAGTCCAAGAAAAGAAATCATCAAAGAAATGAA
AGTGAGTGAAGAAATTTCCAGAACTAAANAAAATGAGTTCCCAGGATATT
GACGGCACNCACTAATAGNTNCACAGNANAGTAATTATGAAATTACANAA
CATGAACATAGAAGAGATGACCCTAAAATCTTTCAGAGACAGAGGAAAAG
CGAGAANANGTCAGGAATCAGAATGGCTCGANTTTCTCAATAACAACACT
GGAAGCTAGAAGACAATGGAGNAATGCCTTCAAAATTCTGAGGGAAAATT
ATTTCCAACTAGAATTNTATACCCAGCCAAACTATCAATCAAGTGTGAGG
GTAGAATAAAGACATTTTCAGGCATNTACGNTCTCAAAAATTTACCTCCN
ATGTACCCTTTCTNAGGAAGCTACTGGAGGATGTGCTCCACAAANANGAG
AGGAATAGAANCAAGAAAGACANGAGACNCGGAAAACAGGANACAAAACG
GAGG
>rnd-4_family-224#LTR/ERVL-MaLR ( Recon Family Size = 22, Final Multiple Alignment Size = 17 )
TTTACAAAGTTCAGCTTCTGCCGGACTCTTGCTCTCTTGGAGGCCAGCCA
CCATGCTGTGAGGAAGCTCAAACTAGCCCACATGTAGAGACCACATGGAG
AGATGGAGAAGCCACGTGTAGGCGCTCCGGCCAACAGTCAGCATCAACTA
CCAGACGCGTGAGTGAACGAGCCTTCAGGATGACTCCAGTCCCCAGGCGT
TTCCATTNACNNAGTGTCAGGTCACCCACAGATTCGAACCCTCATTNGAN
NCTTCCCAGCTGAGGCCCCAGACATCGTGGAGCAGAGACAAGCCATCCCC
ACTGTGCCCTGNCNAAATTCCTGGCCCACAGAATCCATGAGCATAATAAA
TGANTGTTTTCNACAACTGAGTTTGGGGTGGTTTGTCNCCCAGCAGTA
>rnd-4_family-2170#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
CCACAGCAACCCCATGAGGCAGAATTGTCTCCTGACGTGGATGTTCATGG
TCGCGATGCCAAAAAGGATTCGTGNTCAAATAAATTTGGGAAACGCTGGG
TTAAACAAAGTTAANTAGGTTTCTTTATTGCAGGNCTTCTCAGAGCCTTT
AATATGCTAGTGCGCACTGTGAATCTCCAAGAGGAGGCAGAGTGCGCCGT
TTCCCAAACTTATTTGACCACAGAACCCCTTTCTCGCAGAGTATCACGTA
GGCTGAGAATCCACAGAACACATTTGGGGAA
>rnd-4_family-3349#Simple_repeat ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
ATATACACATATACATGTATATGTATATATATACGTATATATGTGTATAT
ATATATATATGTNTATATATATATTTATATA
>rnd-4_family-2350#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
GGACTAAAATCCAAACCTCACTNCGTGTCCATNCGGCCGCACACGCCCTG
CCCCNCTGTGTCTCTGACCTCATCTCGCACCATCTCCCCGCTCACTCACT
CCGCTCCACTGGCCTTCCTTCTGTTCCTCAAACACGCCGNGCTCGTTCCT
ACCTCAGGGCCTTTGCGTTTGCTGTTTCCTCTGCCTGGAACACCCTTTCC
CACTTCTCTNCATGGNTGACACTTTCGCTCATCCTTCAGGNCTCAGCTTA
NATATCANCTCCCCAGAGACTTGACTCCGTCCTGCCCTCTGNTNTNAAGG
TGTCTCCCTGAAT
>rnd-4_family-1504#SINE/MIR ( Recon Family Size = 26, Final Multiple Alignment Size = 17 )
TTTAGAAAATATGCTTAGAGTTGCAATAGCAATTGAGAACNCAGGCTCTG
GAGTCAGNTAGACCTGGGTTCGAATCCCAGCTCTGCCACTTGCTAGCTAT
GTGATNCTGGGTTGGAAAGTACTTAACTTCTCTAAGCTTCAGTTTCCTC
>rnd-4_family-1237#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TGAGCCTAGAACACCTTGTTGTGCCAGAAAGTAAGAAAGTGCTCAAAAAA
TGATGGGGACATGTCAAAAGGACANAGAAGCCAGCTTGAAGGGGCTCCCA
CCGGCCAAATCTGGGACAATTTGAGCATCAAAATAAATGATAATAACGGA
TNATAATCCACTGAATAAAACAGGAANCCGTGAGTCCACACTA
>rnd-4_family-4437#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CAATACGCATTCATGATAAAAACTCTCAGCAAACTAGGAATAGAAGGAAA
CTTCCTCAATCTGATAAAGGGCATCTATGAAAAACCTACAGCTAACATNA
TACTTAATGGTGAAAGACTAAATNCTTTCTCCTAAGATNAGGAACAAGGC
AAGNATGTCCACTCTCAA
>rnd-4_family-229#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
TTTTTTTTTTTAAATTTTTATTGCATTTTAGGTTTTGGGGTACATGT
>rnd-4_family-2813#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AATATTAAAAACAATTAGAGCTAATAAACGAATTCAGCGAAGTTGCAGGA
TACAAGATCAATATACAAAAATCAGTTGTATTTCTATACACTAGCAATGA
ACAATCCGAAAANGAAATTAAGAAAACAATTCCATTTATAATAGCATNAA
AAAGTTTTTTAAATATNTATACTGGAACTTTCT
>rnd-4_family-959#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 16 )
ATAAAGTTGAGGAAATCTCCCAGAATATAAAACAAAAAGTTAAANAAATA
GAAAATAAGAGGAAANAGAGAAGAAANCTGGAGTTAAACAACCAACTTAA
CAANGGATTTTCTAGAAAGAGNNAGNAGNACAGAGAAGAAAGAAAATATC
AAGCAAATAAAAGAAAAAAAATTTCCCGNAACTGAAANGTACGAGTCTTC
AGATTGAAANNATCCACCAAACGCCAAGCAAACAAAGCATGAAAANAAAA
ATTTATACCTAGATACATCATGTGAAATTTCAGAAGAAAAAGAGAAATCC
TAAAAGCTTCCAAAGAGNAAAACANTTATCNCAAAGCAACTAAAGAAATC
AGACTGGCNTCAGACTTCTCACAGAACACTGAACGCAATAGAAGACAATG
GAGCAATGCCTTTAAAATTCTGAGGGAAAATNATTTTNAACCTATATTTT
AGCCAAATTACCAATTGAGTGGTTAGACAGACAAGAATTCAGAAAATTTA
CCTCTCCCATACCGCTTTCTNAGGAAGNTACTNGGAGNATGTNTTCCAAC
GAAAGAGATAAACCATGAAAGAGAAAAACATGAGATTTAGAGATCAGTGG
TGATATCCGAGGAATGNAGTGAAGTNCCAGGACGACNGCTGTACGGCAGA
GAAATACCAGAGTTTAAAGCGGAAACGGGAGGCTCCGGGAGGGAGCTGTG
GAGGAAATANNNNNAGCACNATGGGCAATAACAGTTAAACTGTGAGATGG
NNTTTAGGACATACCAAGGACTGNACAAAAATTTTTNGNAATCCAANANA
AAAANNAAGGCTANTNAAACTCCAGGAAACGGGAGTCAATGAGAGTCAA
>rnd-4_family-837#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
GGCTCTGGCTTCCCCAGCGGCTGCCCAGAGGGGCTGGCCGAGCAACCCAG
AGGCGAAGGGAGTTAACGCCTCGCGGGGCAGACTTTGACCGATGAGNCGG
GAGACAGGAAGGAGCCGGCAGATGAATTNCTTCTCCCTTCCCTTCCNATG
GACTGTTCTCAGGCTGCATNAGTNTCAGGCAGCCTNTCTGGAGACGTCCT
GTAAGGCCGATTGACCGCTGTGGCCGGCTGGTAATACATCCCCTTTCTAA
TTTGCCCTTCTTTCTCTGCCTCACTTCCTTTTTTCCTCACTCTCGCTNCC
CCGGGATTGTACTCCCCAATAAAGCGTTAGCACATAAGCTTTGCCTCAGG
CTTTGTTTCCGGGGAACTCGGGCTGAGA
>rnd-4_family-2466#DNA/TcMar-Mariner ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AAATTNGGTAACAATGAATTTGCCTAANGATCCAGATGAANTTGTCTACC
GTGAATCAGGCTAGCAGTGTTTCTCAACGGGGGCGCTGTTGGCATTTTGG
GCAGGACAGTTCTTATTGTGCGGGACTGTCCTGNGCATTGCAGGATGTTT
AGCATCCCTGGTNCCTACGCACTAAATGCCAGTAGCACCCTCAGTCATTN
TGACAACTAAAANNNTCCCGCCATTTCCANATACCAT
>rnd-4_family-1275#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GCCGTTTATGATGTCTATAATTTACTTTAAAATACTTCAGCAATAGACAC
NGTGATATTATGCGTGTGCTGGTCGGTTTNAGCTTCAACTCTAGGGGCAG
TCGGTTGCTTTAACGGAAAATCCTACTCCAGNGGTGGTCAGCCAGCATTT
TATCAGAAAGGCCGCACTCCAGAGGCGGCTACTAAAGCGCTTCTTTTATC
CGTATCTCCTGAACACCNGAGGCTTTGTTAATTAGCATAATGAATGTCGG
AAATAGATTTTCATTGTTGAAATTAGTGNCTCGTTAATNAGCATAATGGA
TATTAGAAATGGGCTCTCATTGGTGAAATTAANGGTATTCAAGATACGTG
GATTGGCTAAAATATTT
>rnd-4_family-2142#LTR/ERVL-MaLR ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
TGTCTGCAGCACTATTTCCAATCCCATATGCCCTCTCCAGAACCTTNCCN
CTGTCCCGTNGAGAGGTGGAGTCTATGTTTCCTTCACTTTGAAATCTGGG
TGAGNCTTGTGGCTGNCTGGTACGGAAATGGCGGAAGTGACGCTGTGTGA
CTTCCGAGACTAGGTCATAAAAGGTGANACGGCTTCTGCCTGGCTCTCTN
TCTTTCTTGGGACGCTTGCCCTTGGAACCCAGCCACCGTGCCGTGAGGAA
GCCCAGNNCACATGAGAGGCCGTTGCAGAGGTGTTCCCAGCCAACAACCC
CAGCTAAGTTTCCAGCCGACAGTATCACCTCAACNACCAGACAAGTGAGT
AAATGAGCCTTCAGATGATTCCAGCACCCAGCCTTCGAGCCGCCCCAGCT
GATACCTAGCGGAGT
>rnd-4_family-1535#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
CATTAATGCAGCCAAGTCTTCTCTTCCGAGGCCTTGCCCGGATCTAGGAA
AGNTTAACTGAGAGTCTGATACCTTTAAAGGTCTGAAAGAAACATTTACC
ATCTATTCTCTCTGAGGGCTGCTACCTGTGAGGTTTCATCTACATAACAA
GACCACCTTTGCTAGCCAGGNCTCTTCTCTTCTCCTTCCCATAACCTGTC
TTGCCNCTAAACCTGATTTACCACATAACCTGTTTTTGGCCATGCTCCGA
GCCCCCATTCTTTCTGTAACCTCAAGGTGGTATATAAGCTTCTGTACCCC
ATTGGGAGGTTGGGTCTTCATTCTGAAGGCTCTCGCGTATGCATATTAAA
TTTGTATGCCTTTTCTCCTATTAACTAATCTGCCTCNTGTCAGTGATTTT
CAGCGAACCTTCAGAGGGCAAGGGGAAAGCTTCCTTGGTCCCCTACACT
>rnd-4_family-756#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AGGATAGGGAGAGATTTGTTAAAGGATACAAAATTACAGCTAGATAGGAG
GAATAAGTTCTAGTGTTCTATAGCACTGTAGGA
>rnd-4_family-129#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 16 )
TACTTCTGAAACAGCAGCANTTTGCCCTAGCTCAAAGAAATACGGTAATG
AGATTNAAAAANANATTTTTTAAAGGGGCTCAATGGTTANAAGNCAGCTT
AATTAAAAAGCTAANATCCAAGATNTGTGTGTGTGTGTGTGTGTGCGTGT
GCGTGCGTGCGTGCACGTGTGTGTGTTTGTATATAACGCACNTTCATGTT
TCGGTTTTTGTTTTTCTCTCCTAGGNCCTTGTCTTTTATTTATTTATTTN
TTGAGCAAAAGTTCTNGTTTTTNTTCTCAGTTGACNGAATTCCGTTTTCA
TTTNATTTNTTTCTGCTGTCTCTCCTTTCTTTTGCACCTCTGCTGCAAGC
AGAACCTAAAATAGTCTATAACAGCCTAAGGGTTTCCTTAAAGAAAATCG
AGAAGGCGCCAGACTCNCTTTGGGNGAGAAACCTCATCTTCNTTGTNNAA
CCCCAAGANTGTAAACAGACAAGATNNGTCTCANNTCTTANACTGCTTGC
TTTTGNATTGTGTTACCTTTTTTTATTNCGACTAAAATAGTTATTGCAAC
AGGGGCTACTCTTGGGTGTTTAAGATAAGAGTGTAGTTTAGAGANTTAGC
AATNCCTNCGTTAAAAAATTTTTTAAGTACATTGTAAAAGCATGANATGT
CNCAGTGTCATAATAATCTCCTTTTTGGAGACCCAGGATTCAGTGTGGGC
TCTNCCCGGAGCTCAGAGATCCAGCTGATTAAAACTAAAGNTAGAACTNC
CTATCTAAATAAAATNGGTCTCCTTATACAATCCTATGATAGATTTCTAN
CAATTTTATGTTTGATTTGGCATCCATCTTTAATTTCCCTCTAGCACCAC
CAGACTTTTTCTCTCTGTACCTTGAGATGTAAATTTTGCTATNTGATTTT
CACCTAGAGTTGTTTCCTTTAATATGCAAATTTAGGGCTATTTAGCTGAC
AACTGCCTAGGGTNNTGAAACAGGTCATCAAAAATCTAAAAGTAAATCTA
TAAGATGTACTTCTATTGGNATGCCTAATACGTCTATGTATTTATGTGTC
GTGTACACAATGTTTCACTACTAGAAATATGTAAAAGAGCTCTAATTAAT
TGGCTTAAAAAAGCGCTTAAATNAATACTTTATCAGAAAAAAAGAAGACT
TTANTAGCCAAATGNNTTTTCAAGTTTATGTGACTTAAGTAAAATCTTTA
ATAAATAAGCTAGCTTTAAAATTATTGGTAAAATAANATTAGAAATGTCT
TNAGAATTGTCAGCATACATTTTTGTTTGCATTTATTGATCAAGCAATTT
CATACTTATCCCTGCCAAATACTATAAGGTGTCAAAATTTGGCATAGGGG
TTATAAAACTATAAACCCAGCCCAAAACAGAATGATCTTTGTTTGTGTAN
TTTTTGATAAATAAGACATTGATATTGGTTTAATGAAAACAGCTAAATCT
TGAGTTTA
>rnd-4_family-263#SINE/MIR ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AGCTCCCAGAGAGTAGAGGGTCNGTNTNTGTGCAGGAAAACAGGAAAGAT
CNTTGGATTAAAAGTCAGGAGACCTGGCTCGACTGGGAGTCAGGAGACCT
GGNTTCTGGTCCCGGCTCTGCCACTTGGTAGGAAACTTGCCCGAAGTCAC
TCAGCTTCTTTTCTGGGACTCAGTCTCCTCATCTGTAAAATGAAGGGGTT
GAACTAGATGATCTCTAATGTCCTTTCCA
>rnd-4_family-1540#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CATGCATGTTNTATTAAGTCTTATATAANATATATATAGATTAAAAAAAA
TATATGTGCGTGTATATGTATATATACGTATATATACACACACACATATA
TACATATATTTTTATATCAAGTTCAGCTACCTTGTGAATATATATGCGTA
TCTACAT
>rnd-4_family-3714#DNA/hAT-Tip100 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
GGACAGTGGGAACGGNTCGCCCTGGGTACAGNCAACAGGGGATACATTNT
CTTACAGATANTTAAATAATAATAAAATCGACTAAAGTTTGATCTGCTTT
TTATTATCACCATGCGCCAGCAATTCTAAANAATCATCGATGAAAAAATC
TCTTGNNNGNTCTGGTTTAGTTCTAAACAATTGCTGNAGTTACCGCTGAG
TTTTAATAATATATATGTAAGCTTCAAATTAGCACATTTNNATTACTTAT
CTTTAATAAACATTGTATTCTACATGGAAGTTAATTTGGAGAACTCCCAG
TTATACAGTCGGCCTCCCACACATGTGGACTCAGCTACACGCGTTCGTTT
CGAGAGTAAGTTTNCAAATTGGTTCGGAATCNTTCAAGCTTGCTTCGGGT
ACAGTTCGTGTCTCCAACCCCNGTGGTACTACATATTCCTGCATTTAAAC
AGTAGATTCGAAATAAACAGTGATAGCTATATTNATTTTCCTTTCCT
>rnd-4_family-1487#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
CCCNCCCCTTCCTGCCCAAAACCCTCCTGGCTCCCGCCTTGGAGTAAAGC
CCGAGTCCTCTCCATGGCCCACAAGAACCTGCACGACCTGCCCTGTCNCC
TCCCCCTGCCCTCNCTCCCTCTCCCCCTCCTCACTCTGCTCCAGCCACGC
AGGCCTTCCTCTCAGNTCCTCGAACACGNCAGGCTCTGTCCCGCCTCAGG
GCCTTTGCACATGCCCGTTCCCTCTGCCTGGAACGCTCTTCCTCCAGNTC
TTTCCACGGCTCCCTCCTCCTCACCCTCAGGTCTCCTCGTGAGTGTTGCC
TNCTCACTG
>rnd-4_family-2180#LINE/L2 ( Recon Family Size = 24, Final Multiple Alignment Size = 15 )
CTCTGAGGNCAGGAACTGTGTCTTGTTCACCTNTGTATCCTCAGCNCCTA
GCACAGTGCCTGACACGTAGTNGNNGCTCAGTAGCGCTTGNTAATGAGTG
AATGGATGAATGAATGAATGAGNGA
>rnd-4_family-1075#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CCATANAAATGAGCCAAAGATGGCCTCTGTGTATTGGCCCCTAGGTTGTT
TACTTCTTCGCAGCAGGCTGAGACCTGTTAGCTCAAAAGCCCGCCGGCGC
CAAACTCAAATTTTTACACATCCATTATTTTTTAAAATAGCCCAAATAAG
CANATTTTTAGCCATTTAGAGCCTGCCTGCTTTGCATACCCCGCGAAACC
NCACCCAACATCTGCCGGCCATNGATAAGATAGAGCCCCGGGCTATAAAG
CTCCAAGCCGCTGCTGCCTTCGGAGCTCTCTGACCCAGAGACTCCCTATC
CTGCTGCCGAGCGATATCACCTGGNCACGTNAGCCCCCTCTCCTTNCCCC
CTCTCCCCCAGGAGTTCCCTTGTCCTCTTCCGCTTCTGGATGGTGACCCT
CTGTCTGTTGCCTCTGAGATGTGCCATNCTGTGAGGGACTTCCCCTACAT
GCAACCCTGTCCAAGCGCCGCCCAATAAAGCTTGCGTGTGTTACTGCCTC
CTGTGGTCATATCTTCTTCCTTGATCAGCCCCCAAATCCTTCAAGCCTT
>rnd-4_family-1271#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
ATTGAAACACGCGAAAGTATAAAACTCACTGGTAGAGCAGATACACAAAN
GAGAAAGAGAAAGGAATCAAATCTTATCACTACAGAAAACCACCAAACCG
CAANGATAAACAATAAGAGAGGAAGAAAGAAACAAAGTA
>rnd-4_family-135#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 15 )
TACGGATTCACCGCCGCTAACATACTTTGGTGCCGCGTGACTTGGATACG
TCTNCTGCTAACATACTTGGTGCCACGTGACTCGGATACGTTCCCCAGTG
GTAAGACACCTCTACGNCTCGCCTTTTCGGCCGGAGNCGTTTAACCTCTA
TGCTTNTCATTCTTCGGCTGGAGGCGTTCGANCCCCATGCGTGGTTTTCT
TCTCCCCTTTCTCTCTCCTGCTTACTAACCAACCCGCAGAATGATTCCTC
TCAGCCACAGCCGGCTCTGCTCCCCCCGGCTGATCTCTCAGCTCACCCCG
ATGGGTGGCTCTCGGGAGTGGTGGGAAGGACCCTGGGGTCCACACTGAGC
AGACCTGAGGCACTAACGGCCCTCCTGGACAGGAGGNTCATAAGAGTGGT
AGGGCTAAAGCCTAAAACCGTGCAATGTCTGGGGCTTCCTCTGCTTTTTT
AACTAAAATCGGCTCTTCCNAAAGAACTCACACGCCTATTNTCCTGTTTT
CTCTGTGTGTTTTTTGAAATGGCCTTGCGCACCTGCCAGACCGTCCACCT
TGAGAGCAAGTCTGCCTCTTCTCTGTTCACTTCGCATGCCATGTGACTTC
TTAAACACACGCTCCCTGTTATTTACGCGCCCATGGCTCTTGCCGTATTT
GCGTAGCAGCAAAGACACGGGCCCCTTTGTGGANATCCCCTGAGGTTTAC
ACTTGTTTTTAACCTACCAGCTCGGGTGACCTCCAGTCCCTTTTTCTGTC
CTGGCACATTGCCAGGACAGACACTAATTGGAACTCCGGCTCCGCCAGTC
CTTNCGACTTACCATATACTTTTCGTTCCTGTTACGCCNCAGGGCTAAGT
TTTTCGGTGGCTTTTGAAGCAGTTTGTCTGCCTGCATAGGGCCTCACTCT
GTGGCCCTTTGAGGNNCCCACCTACTTGCTTTTTTGGAGTTAGCACCCCC
CTTTGGGAGAAGGAGAAATTCTTCCTTTGCCATTTGTGAGCCCTTACCCC
AAGCCCCAAGTCCTCNAGAGGTTCCTCCTTTATGTCAAGAGGGCAAATAA
ACGTTACCCTCTGAATCCAAGGGCTGCTGTTTTTGCGAGCATATAAAGGC
TTTCCATGAGNATTCCTCTCGCTTCCTCCCACTTCCTCCTGTAGCCTCCA
TTTCTCTAATCACTTCCACGCCCTTCTCAATACGCATCAAGACCTTCAAG
GTCATATTCAAAGGGAGGGAAGTCCAACCCCCTTGCGGCAGTTAGCTGAA
AAACAGGCTTCTCGTCTACTTAAAGAACATGGGAAATGGGAATCTGAGAA
AAGAGATAATCATTTTGTTGCTAGAATGCTCTGAGCGAGAGTCACTATAA
GGTCATGGAGACAAGGANATATAGGCTGGCCCAAGGCCACAGGCACAAGA
GACCCATAGGACAGAGATGAAGGCTGGTCCCAGGCTAACAGATTACCATT
AGAACAGAGATGAAGGCAGGTTAGGGGTACACGGTAAGGCCGGTTCATTC
CCGAACCCCAAGGATGAACAGGGTGCCCNCTGTTCACTCTAATATCTCCT
CTGTTCTCAAGTGGGTAATCGTGANAAGATGGGACCAAGGTTAAGGGTAC
GCGGTAAGACTGGTTCATTCCGGAACCCTAAGGACGAATGGGGGATGCCC
TGTTCAGGATAATAGAAAAGTAAGAGGGGACGCCTTCTTTTTNCTTTTTC
CTTTTTTTCTCCTCTGTTCTCTCTTTGCAGATGGGTAATTACGTCTCCAT
ACCACAGGACACGCCCCTTGGATGCATCCCCAAGAACTGGGAAAAGTTTG
ATTCCCCCAAACCTTAAACAAGTAAACAAAAANACTAGTTTTCCTTTGTA
ATACCGTTTGGCCTAAAAATGAACTGGGAAAAAATCACAAAAGTCAGCCT
TGGAATCCAGTGCCCCNGTGCAGGAGGTCCTCAGATTAGCCTCCTCAGTC
TTTTATAACCAAGANCAGGACAAGGAGGACAGGGCTAAGAAAAAGGAGAA
ATGCGGGGACAGAGGCAGGCTTAACTACTGGCTGCTTTACGAACCCNCCA
GCCCCCTCCAGGTTGNNCTCAGAATACCCCTCCAGGNAACTGCCATCGGC
GTAGGAAGCCGGGCCGCTGGAAGGCAAATTGNCCCAATGGGATAAATGGG
AAAAAGNCCTACACGGCTTGCCCCCTCTGCCGCAAGCTCGGNCACTGGAA
ATAGGACTGTCCTGANGGCTGATGCCCCCGGGACAGAATCCCAACCCCCG
ACGGCCTTGAGCTGAAGGGGCTCTCCGCTCGGCTGGCTTCCAAATCAGAC
ATCGTCGTCAAACACAANGNCAAGGGCGACTCTGGAGGCGNCAAGTAAAA
TTACAAATTTTCCTTTTGGGTTCAAGAGCTGCCTACTTTGTGCTAATCTC
CTTCTCTGAGCAACTCTCCAAATCCTACTGGGTAATGGGGNCAAATGNCA
CCCCCTCCCTCCGAAAGAAAAGATTCACGCNCCTTTTGGCAAAAATANAC
TTTCCAAGATGGGTGCCTACTTAATATTTACCCAACCTTTGAATTCATCT
TTCCTTCTAATTGTCTCTCCCGGGAAAGCTACCTAAATTTTTAACCAATA
ACTTNAACCTATATAGTCCTACCTCANGAGTTTAGATAGCCCACGCTTAT
TCAGACAAGCCCTAGCAAAAATCTAACTGAGCAATCTCTTGAGGGGGGAT
AACTTCTACAGTATGTAGATAACCTCCCTATCTGCCCCCCTTCACAGGAC
TCGCACGGCAACATGCAGTACAAACCTTAACTTTCTAACAGAGGAAAAAT
GACTTTTGTCTAATTCAAAGGTTATAAAGGTAAAGAGGTAATTTTGGTAA
GGAAGTTTANAAAGAAAAGAGATTTTGTATGAGAAAGGATCTTGNATGGC
AAATTCTTGTCCNAAAGTCGAATGACTGGTTGTTT
>rnd-4_family-4339#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGAGAGGGGAGACCCCCTCGNCTCCTTCAATTTCACCTCCTCCCTTCTCC
ACCTTCCAGATGGGAAGGAGGGTGAAGAAGGAAAAAAATAAAATAAGATA
CCAAAGGACTGGGAAAATGACTCCCTTTTCGGTTCCCAGCGTCTCTGCTA
TCCGTNAGCCTTGAAAGAGTTGCAAATGAATGTTATCCCTGCCGGCCGGA
GCCCGGCACTGGTTCACGCCCCCACGTCTNCACGGNCCAGACTCCCTCCT
GGAAACACCTCTGCCAATAAACGGTTTGCTGCCTTTGTCTTGTCTCTGTA
AGCCCCCTCCCCTGCTNGTCCCCGCTCGCGCTGCATATGAATTAGCAAAT
CAATGAAGCCAAAAGACTGTAAGGTCGGACGTCCAGCNAATGGACAATGA
CATAGTTTCGCCTCAGTTTCCCCTTTAGCGTTGTAAGCCTATAAAAGGGG
AAAGAAGCTGCTTCTCGGGGAGCTCGGTGAATGAGGCTGTAGCCCCCCGC
AGCTCCCGGCCGAATAAAAAGCCACTTCCTTCCTCAGTTCAGTGTTCGAG
AGGTTTGTTCCCTACCGCTCCTGCT
>rnd-4_family-1120#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
CCACATGAAGAACTGTCCCATTGCACAATTCCTGNACGTCCTTGCAGACA
TTCATTAGGGNAGAAAAAATCTACTTNTAATTATCTGAGCCTAGAACCCG
AATNCATTTTATCTGGGTGGGTCACATGTAGCATTTGTTTCACACGTAAA
GACAAAGTGTTTTTCTATATTAGNAATGCAATGGAATGCAGNAAGTTGAG
GAAAGATTAGTACTTCGTTTTGTTCNGAACTTTACCAAGAGTTGTTCGCC
GTTTCTGAAAAATCGTGTCATTGACGGTAACGCCGNTCGNGTTTAGGTCA
NCGANNCAACACACCTGTTGACAGCCTGCATTTGTAGCTGTCACATTCAC
GGCGATTCTATATGCTTGCTACCTCATTATGTCTTCNAGTGTAGTCATGC
CTAAGCATTTACATATCAAAATACTGATACTATTTTATTNTAAATTACTT
TTATTCTTCCTTTAATATTACAGTTAGGGTATTATATTGATTTTTTAAAA
ATATGTGTGTNGGCAGNTTATATTATCTATGAATTTCATTTCAGGATAGT
AAAAGGGCATTATAAAATATTGTTATTAAAAAAGGAGCANCTGGGTCTGA
CAGGGTTGGGAACCACTGATCNAGAGTGTTCCT
>rnd-4_family-916#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
GGTGAANAATTTTTGTCTAATTCAAAGCTTATTTAAAGGTTACGTATAAA
ACAAGGTAAAAGGAACCAGGAAGTAAAAGAGATGTAAAGAAAGTTACGAA
AATAAAGATNTTTCTTTTTTTTGGTAAGAAGGCTTAAAGAGAAATAATTT
TATATGAGAAAGAATCTCGTACNGTAAATTTAGTCCTAGAGTAAAATGAC
TGGTTGTTTAAGAAAGAGGGATGCTCANGGCAAACCAGAANGTCCAAGCA
TGTCATGAATGGTCTGTGTAGGTCATAATAAGAGGATTTGTTTTTTAAAA
AATTAAAACTTTATATGATCAAGTTGTCATANTATTATTTAGGTTTTGGT
TTGCTTAGNTAAAAAGTNAGATTTAAAANATTTTTTTAANTAAGGTTATT
ACATCTGTGTATCTCTCTGCANGCACCTTCGAAGTACTTGTGACACTGAG
TTACAGGGCTTTGACTCCTGGGCCTAAAAAGAANACCAAGTCCTGCTAAA
TTTTAAATATTGAAAGCAATTAAAGCCCCATCTTCAGGCCCCGTAGAAAA
TGTCANTCAAAATAAACNGCATTCCTGAGACACNGGGCCAGAAATTAGAG
GTATTTCAACTCCTCAAGGCCCGGGGACTATCAAGGAAGAGGTGGGTGCG
CGAGATTGTAAGGGCCGATTTTGAGAGATAAAATNANTTCAGAATCTNTC
TATAAATTAATCATTGATATCAAAGGCACACTGATGCAAGACCAGCATAT
AGGCCCCTATGTCAACAANGTTTTCTTGAAGCGTTAACCGACTTCTTAAT
AAAGATTATAAAGTCAAAAAGGCTTATGGAAGTTNTATNTTATGGTCAAG
ATTAAAATTTTATAGATTGCTTATAAAATTTTAAAAAACANATTTAATTG
GCTTCTTGCTGTTTTTATTAGAGCTTNTCGTTTGGAAAATTAAGTCTCCT
CTCTCAAAGAATGAAGGTTTTTACCTTTTTNGAAATCTTTGAGTTATCAC
TTTGGTTAAACGAATGATTTATTTTNCAATGACCTGTAATTCTATTTTGC
GATATCAAGTGTTTTAAACTTTTGATATTTGACAAACTTTCCAAAATCAA
ATTATAAATTATGTCTTTTTCTGACCTAATTAATTCTTTAAGATATTAGG
TTCCCTAAAGTCCAAAAATGACATAATTTGGCTTATTTGGTATAAAAATT
ATACAGGAAGCATTGTCAAATATGAAATGGTGTTTGGTTTTCTTTGGGCT
GTATTTGTATAAATATGTTATTGGTATGTGTTCCAAAATTATGGGAAACT
CCTGTAATTCTGACATGACTTAGTGTACGTTATCAGTAATAATTATAATT
GTTATGTTAAATTATCGTGTGCCACAGAGGTAACAAATTTCCTTGTCAAT
TGTGTCTTTAACTGTGGCTGCCCTAAAATTTTTTGTCATCCACGGACAAT
TGTTGTCTTGTTTTGGTCCTCTTTAGAAGGTGGTTTTATAATCAGCTATA
AGACTGACAGGTGCTCTTGAATGCAGGTTTCTGATAACTTTGGAGATTGT
GACATTAGAATAGAGGGAAAAACTTTCAGGACTCTNATGGAGAGCTGAAA
TGTTCATGAATATCAAGNAGAACAGGAGTTAACTGNATGGACTGAACTAA
TAGAAGACTGAAGTAATCTTTTTGACTTTTTGCTTNAAACATTGCTGATC
CTTTTTGTTTTTCAGAGTCAAGGAAACTTNTTTTGAGCTATTTACA
>rnd-5_family-428#DNA/hAT-Charlie ( Recon Family Size = 194, Final Multiple Alignment Size = 180 )
GAGTTCTTCATGGANCNGTTAGAATTCAGGGGGTCCGTGAACTTGGATGG
GAAAAAAATACTATCTTTATTTTCACTAACCTCTAACTGAAATTTAGCAT
TTCCTTCAATTATGAATGTAGGCAACAAACCACAGTAGTATTAGCAGTAC
CTGTGACTTTGTCACCAATAGAAATCACAGATATTTTCATATCACATTAC
AGTTGTTGCAGATATCTCGAAATATCGTTTACGCTCATCACTACTTTGAA
ATTACGGTAGTTATTAGACCCGCCGCTAGATCTTGTTATTTAATGCGTTA
ATAAAGAAGCACATATATTACTATATCACAATTTTTAAAAATATTTTGAT
AACTGTATTTCAATATAATTGGTTTCCTTTGTAATCCTATGTATATTTTA
TTTTATGCATTTAAAAACATTATTCTGAGAAGGGGTCCATAGGCTTCACC
AGACTGCCAAAGGGGTCCATGGCACAGTGTTTAACTCAGTGTCCGGTTCA

>rnd-5_family-2959#DNA/TcMar-Mariner ( Recon Family Size = 165, Final Multiple Alignment Size = 163 )
GGTTGAACCATATGAAATTGCCGATATTCGACCATTTTTTTGACCTACAA
AAATGGCAATTTCATATGGTTCAACCTAAT
>rnd-5_family-603#DNA/hAT-Charlie ( Recon Family Size = 204, Final Multiple Alignment Size = 151 )
TGTATGCAAAANTTTAGTGTGTGTGTACATATGTGCATTTTTCTGGGAAA
GNAGGTCCATAGCTTTCATCAGATTCTCAAAGGGGTCCGTGACCCAAAAN
AGGTTAAAAAAACTAACACTGCTTTGGTAGGAATCANGAAANATTTTTA
>rnd-5_family-74#LINE/L1 ( Recon Family Size = 245, Final Multiple Alignment Size = 148 )
TCACCTNACTATCAAAGAAATNCAAATTAAAACAGTAAGGAGNTAACCTT
AGTTTAAAATTTTGGTAATATTCAGTGTTGGCNAGGATGTGGAGAAANAG
GCATNCTCATATGTTTACACAGCTGGTGGGAATAGAGTGTAAATTGGTAC
ANNACTTTTCTGGAAGGCAATTTGGCAATATNTATCAAAAGCTTTAAAAT
GTNCATACCCTTTGACCCAGCAATTCCACTTCTAGGAATTTATCCTANGG
AAATAATCTGCAGTGCAAGCAAAGATNTATGCACAAAGATATTCTTCAAA
CTGTTATTATAAACAAACTAGCAGCCCAATCATCGAANANTGGTTAAATA
AATGATGGCAAATATCTGCATGNAATATNTGTGCAGCCGTTAAAAAGGTG
TTTTATAGGAAAATTTTTAAATAACTTAGGANAATGTTTATGATACAACC
TAAATTATTTTAAGGCCTA
>rnd-5_family-444#DNA/TcMar-Tigger ( Recon Family Size = 226, Final Multiple Alignment Size = 135 )
GTTGGCCCTCCGTATCCGCGGGTTCCGCATCCGCGGATTCAACCAACCGC
GGATCGAAAATATTTGGAAAAAAAACA
>rnd-5_family-1043#LTR/ERVL-MaLR ( Recon Family Size = 182, Final Multiple Alignment Size = 135 )
TTCCTCCATGTGGTTCGGGTGGGGCTGACCCTTCCCGCCCTCTTGGGTCA
TGTCCCAGGCCTGGCCAATCAGAGGCCCACATTCCTCTGGCCACAGTGAT
GGTTCAGGAGGGTAGGGGCATGTATGACCCAAGCCGGGCCAATGAGAGCC
AGTCCCGAGATTCTGAGAATTCTTCTGGAGATGTTTGGCAAGAGGTTGCT
GAACTGGNAGGATGTAAGCCTGGAGCTGCCGGCGGCCACCACGTGGAGAG
AGCCTGCTGAGAAATGAAGCCAACACAGAGGAAACAGAGCCGAGAGACGG
AAGAGACTGAGCCCTGATGACATCGTTTGAGCCCCTGGATCCAGCCGTGC
CTGAGACTCATGCCCTTGGACTTTTCAGTTACGTGAGCCAATAAATTCCC
TTTTNGCTTAAGCCAGTTTGAGTTGGGTTTCTGTCACTTGCAACCAAAAG
AGTCCTGACTAATACATGGCGCAAACAAAGCTGCCAAAATATGATCCCAA
TTCTAGTTTTGGTTG
>rnd-5_family-48#LTR/ERVL-MaLR ( Recon Family Size = 147, Final Multiple Alignment Size = 123 )
AGTGGGTTGAATGGTGGCCCCCCAAAAGTTCCACACGGAACCTGTGAATG
TGACTTAATTGGAAAGTCTTTGCAGATGTAATTAAGTTAAGGATCTCGAG
ATGAGATCATCCTGGATTATAGAGTGGGCCCTAAATCCAATGACAAGTGT
CCTTATAAGAGACAGAAAAGGACACACAGAGACACAGAGGAGAAGGCCAT
GTGAAGACGGAGGCAGAGACTGGAGCGATGCGGCCACAAGCCAAGAACGC
CNGGAGCCACCAGAAGCTGGAAGAGGCAAGGAAGGATCCTCCCCTAGAGC
T
>rnd-5_family-1125#LTR/ERVL ( Recon Family Size = 154, Final Multiple Alignment Size = 123 )
TAAAGAATTAACCTTGCCCAAAGAGAGGCTGGCCTTTGTCCCCGGCTCCT
GGGAGGTAACCTCTAAGCCCTTGGAATGTCCTGCCTGATAAGAGTGTCTT
TGTTTACCTGGTAGGGCCTTGGGCCACGCCAGATAGTTTATGCTAACAAT
GTGATTTATGGTGGGGGCCTTGGGCCACGCGGTATCAGCTCGACCTCTGG
AGGGGCTGGAG
>rnd-5_family-1995#DNA/hAT-Charlie ( Recon Family Size = 139, Final Multiple Alignment Size = 121 )
AAAGACCTTATTAANAGACAGTTGNTTTAGAGCATCAGGGATGGCAAATA
GNTTCATCTCGCATGCCAACTCCGATCGATTGGTAGTGGCTGCCTGGAGC
GCTGTGTTGAGAAGGATTCTGAGGCCGCATCTGGGCTCAGCGGGAAAGAG
TGCTGTGATCGATTAGCGATGTCTGCCATGGGCGACGGGATGGGAGAAGA
AGTAGCATGCGTGCCACGTGTTTA
>rnd-5_family-1031#DNA/TcMar-Mariner ( Recon Family Size = 121, Final Multiple Alignment Size = 113 )
GAGATGCTGCCATTGCTCAAAACGTTTTTGGAACTCTTCTTTTGGAATTG
CCTTCAGAGCCAGTTTACGAGCCACACGAGAAAAATCAGTCTCATTACTT
TATAGTCATACCTCGTTTTTGACCCAAAATGGTATTATCCAGCTTGATCA
CCCACCTTATTCACCAGACTTGGCTCCGAATGACTTTTGGCTGTTTCCAA
AAATCAAATCCACCCTCAAAGGACGAAGATTTGCCACCATTGAGGATATT
CAAAAGAATGTGCCGCAGGCTCTGAAGGCAATTCCAAAAGAGGAGTTCCA
AAAATGTTTTGAGCAATGGCAGCATCATTGGAATAAGCGTNTAGCCTCCC
AAGGTGACTACTTTGAAGAGGAACAACACTCATTTGGATATGTAAGTTCT
GGTATGTTTGTTTTNAANTCAGTCCTGATTACCTTAACATTGTATTATTN
NNANTTTATAAACATGGTTAGGAAATGTGAGGTTNNTAGACTCTGGGGCC
AGTCTGCCTTGA
>rnd-5_family-414#LINE/L1 ( Recon Family Size = 111, Final Multiple Alignment Size = 102 )
AATTTATAATTTNAAAACTCCCNCAAAAAAAAATCTCCAGGCCCAGATGG
TTTCACTGGCGAATTCTACCAAACATTTNAAAAAGAATTAACACCAATTC
TACACAAACTCTTCCAGAAAATAGAAGAAGAGGGAACACTTCCCAACTCA
TTTTATGAGGCCAGCATTACCCTGATACCAAAACCAGAA
>rnd-5_family-1160#SINE/Alu ( Recon Family Size = 98, Final Multiple Alignment Size = 97 )
CCGCCCCAAACAAAATGGTGAAACCCGGTCTCTGAAACGAAAACAAAACT
TGGGTTGGGCTCGGCGGCTCCCCCCTGTAACCCCAGCACTTTGGAATGCC
GAGGAGGACGGATT
>rnd-5_family-179#LINE/L2 ( Recon Family Size = 183, Final Multiple Alignment Size = 97 )
TTGCACGTTGAATTGAACTTTGTTATTTTTTATNGTTAGCTGTCTCCCCA
CTAGAACTGTGAGCTCCTTGAGGGCAGGGACCGTGTCTTATTTATCTTCG
TATCCTGACAGTGCATAGTAGGTGCTCAATAAATATTTGTTGAATAAATG
AA
>rnd-5_family-3351#LTR/ERV1 ( Recon Family Size = 101, Final Multiple Alignment Size = 92 )
GGACTAAGCTCTGATTTTTTTTTATCTTGCCCAAATTCCTATCTAAGGGG
TCTGGGGAGTCATGCCCTACAAACCATAAATTCTCATCAGATGGGTTTTA
TTTAACCCTATATATCGTGACTTACTTTCCAACCTGACTCTGGCATAACA
T
>rnd-5_family-759#LTR/ERVL ( Recon Family Size = 111, Final Multiple Alignment Size = 87 )
ATNTGGGAGCACTCTCCCGNGATACAGGATTTAACACCCTGGCAAGGACC
CCAGGAGACGGTGCTAATACGCTAGGATGGCTCCTAGAAGCTTGGAAAAA
GCGATGGCCCACGCTAAGTGAAGTAGAAATGCCAGAATTGCCGTGGCAGA
CGGTGGAGGAAGGGATCAAAAGGCTCAGAGAAGTGGGCATTGCTAGAGTG
GATATACTACGTAAGGCCGGAAAACCCACCAGACGACTATGTTCCGCGGG
AGGGCCAGAGGACACNCCATTTACCAAAGCAATAAGGAATGCGCTGGTGA
GGAGAGGCACCAGCATCACTGAGAAGCTCAGTGGTGGCTGTCCTCTGTAG
GCCAGGGCTGACGGTAGGAGATGCTGTTACAGAACTGGGCTCNCTGATAG
CAATGGGGATGATAGGATCCCGAAATAATAGAGGCCAGGTGGCGGCGCTT
AACCGTCAGAAGCAAGATGGGCGCAATTATCGGAAGACCAGAGTGCCAAG
CGGGGGACCCGACCCGCAGAGAGTTATGGAGATGGTTAATAGAACATAGT
ATCCCTAGGGGCAAGATAGATGGGCAGCCAACAAGGGTATTGCTCAATCT
ATACAATCAAAAGAAATCAAG
>rnd-5_family-300#DNA/hAT-Tip100 ( Recon Family Size = 107, Final Multiple Alignment Size = 86 )
GTTGTGCAGGTTGTNCACTGCACAAGGGCACCCGGCCGAGGGGGCGAGTG
GGGGCTGAAATCCAGCCCGCGCTCTGCTCGCCAAGCCGTGTGCCCTGGCG
CGGGGCTGATTCTCCAGAGAAGAGGGGCGCCTTTTCTAATTCGCACAAAG
GCGCCGTGTGGGC
>rnd-5_family-1533#LTR/ERVL ( Recon Family Size = 110, Final Multiple Alignment Size = 83 )
GACAGTTCTCCGGGTGGCCTTGGACCGACCCAGTTCTCTCCCTTTCTCGC
TTGTAGTTCTCAAGAATAACTGTAGAATGTGCTGGGAATGCAACATCCTG
AGATAGGGAGGAACTGGCCGGAACAGCCCGGGCTCTGTTCCNGTCCCTCC
TAGGGAATGCAACATCCTGAGATAAGGAGGAACTGGCCGGAACAGCCCGG
GCTCTGTTCCGCTCTCCCCTAGAAGCAGGATGTCCTTCAACGCTTTAGCC
CAGCGAGTCATGTGACTCCCCCGGGGTATAAAACCCAGGGCGGGCTGCTT
TCGGGGTCCCTCAGCTGCGGTGCAAGTGGGGCACGCGCAGNCGAGACTCC
ATCCGCCCCGGGCAGCTTTCCTGAGCCTTGGGGGACCGGCTCGCAATGAA
TCCTAGGCTTCTGTTGTCCCTTGCTGCCTATCTGTAAGTAATAAACCCGC
TTCACGTAACTTGTTGCGTGTGAGTGTGTTCTGTCTCACCGGACTCAGAC
AAGTTGGTAACCAGTGCACAGTGAAC
>rnd-5_family-611#LTR/ERV1 ( Recon Family Size = 89, Final Multiple Alignment Size = 83 )
ACAAAGATTCTCTCCTTGACCAAACTCTAGCCAGGCTCCTCTGAGCCCTC
TTCTCGACTAGGCCTCAACCTTGGCCTATAAAGACTTGAACAAACACTAG
CATAGTTTCTAACAGCTCAAGGCCGCGTCCCTAGGATGACCCCAGCCCCC
TTAAAGTGCCTGCCTGAGAAAGCTCAAGGCTGCCAAAAGAATTTACTGTT
TGTTCCAGCCAACACCTGAAGATAGGGCCCCCGTCTCCCAGTCTCTGTGG
GAGGGTAGGAGCCTAACTTCGATAAGCGCCAGTTAGCAAACCCAGATGGG
TTTCACATGGACCAACNNCNCTCCTTCCCNCCTGCTTTTTGTAATTTTTC
ACTTCTCTACTGAGCCCCTACTCCCTCATTCTCCCTTTAAAACGCCCAGT
CACCTCTGCAAATCGAAGTTGAGTTCAGTTCACGCTGGACTCTTTTCCCT
ACTGCAATAGTTATTACTGANTAAAATCTGTTCTTACCACTTTAACTAGT
GTCCGGCTTTGTTTNTCTTT
>rnd-5_family-630#DNA/hAT-Tip100 ( Recon Family Size = 88, Final Multiple Alignment Size = 83 )
TTTTGTTGATTGTCTAGACTTAAGAAAGTGATGGAGAAAATGTTAATAAT
GCAGATTAAACTTAAAAGTGTGTCGTGTCTGTAGCCGTTACATTGTGAAT
AGCACAAAAATTGAGGAAATATTCTTCCAGTATTCGAAAACTATTATCCG
ATTCAGCAAAGAAGTCGCTCACGTCATTGACGAACGAGTGAAGTTCCGAC
ATATGTCTTCTATTGTTTCACTTTCGTCTTACTCGTTAACGTAAATGAAA
ATATCAACCAACATTCATGTCGGAACTACACTCGTTCGTCAATTGCAACC
ATAGGTTGGCTACGGATACAAGAGTTCGGCAAAAATCAACGAAAGCATTC
TGTGAGAATCAATTGGCTATATGGAATTTACAATAAAGTATTGTATATTT
TATTATTATTTGTAAATTGTGTGCTACACATCCTTTATATCAGTAAAATT
TATAATAAACTTATGACACATGCACATATATGCATATTTTTTCGAAAGCC
GGTTGTTAAACATTTACCAGC
>rnd-5_family-2348#DNA/TcMar-Mariner ( Recon Family Size = 83, Final Multiple Alignment Size = 79 )
CTATTAGGTTGGTGCAAAAGTAATTGCGGTTTTGCCATTAAAAA
>rnd-5_family-1586#LINE/L1 ( Recon Family Size = 92, Final Multiple Alignment Size = 79 )
TCTCAAATCAATAACCTAANTTTCCACCTTAAGAAACTAGAAAAAGAAGA
GCAAACTAAACCCAAAGCAAGCAGAAGGAAGGAAATAATAAAGATTAGAG
CGGAAATAAATGAAATAGAGAATA
>rnd-5_family-1250#LINE/L1 ( Recon Family Size = 95, Final Multiple Alignment Size = 78 )
CCTATAAACTCTGGACAAAAATAAAGNAAAATAAACAAAAACAACGACCC
GAANACTANAAAGAAACAATGCCTGGAGAGTGAACAAAAGCAGGCAGATT
CTGGAGGGGAGTCGACACTTGGAAGAAGGAAAACTGGCACGGGGTGAGTT
TCCCGTTTTTACGGCTTTTAGCCTGAGGGCAGGCCGCAGTCNGCACCGCG
CAGGGCGGCTAAAACTCCGATAGAAAGCAGTCTTTCTGGCCTGAAGAACC
AGAGGACAGAGTTCGGGGCAACCACAGCCGCTGGAAAGTGAGGAGGGAAT
CCCAGAAAGGAGAGAGCCAGAGAGGGAGAGCCCCAAATTCTGTGTATAAA
CTCTGCCCAAGTCCCTGAACCACGCATGCGTGAGGCAGAGACTCNAAGCA
CTCAGCTAAGGATAAAAGAACTGAACTGAGATTTGAGCTGCTGCCCACTC
CAAAGGAGACAGAGTTTGCAGTTTGAGTCTAACCAAGTTAATTGCCTGCT
TAAAANATCAACACTCTTTAGAGGAATATAACAGAATCCAGAGTCAAGTC
TCTACAACATAACATTTCACAATGTCCAGGATACAATCCAAAATTACTCG
ACATACGAAGAANCAGGAAAATGTGACCATTCTCAAGAGAAAAGACAATC
AACGGAGACCAAC
>rnd-5_family-3813#DNA/hAT-Tip100 ( Recon Family Size = 82, Final Multiple Alignment Size = 77 )
CAGGGCCGACTTATCCAGTAGGCACAGTGCCTAGGGCCCACGATACTTTT
AGGGGCCCACGAAAATGTTTTAATTTTATTNTTTTAAAATCAGAAGAAAA
AATGAAGTAATAATAATGAATATTTAATAATGAATCCAGTGGATTATATT
ATATTCGTCTTTATACCAACGCAGTCGTAAAATATAATTTTTAATATTTT
TTTATGGAGGAAGGGGCCCACGAAGGCAAAAGTGCCTAGGGCCCACGAAA
GTCATAATGCGGCC
>rnd-5_family-40#LINE/L1 ( Recon Family Size = 98, Final Multiple Alignment Size = 77 )
AATAAATTGTGGTATATTCATTAANGAGAATACTATACAGCAGTTAAAAT
GAATGAACTAGANCTACATGTATCAACATGGATAAATCTCAAAAACATTG
AATAAAAAAAGCAAGTTGCANAAGTATGTTATGCATTTATATAAAATTTN
AAAACATGCAAAACAATACTATATATTGTTTATGGATACATACATATGTA
GTAAAAGTATAAAAACATGCGTGGGAATGATAAACACCAAATTCAGGATA
GTGGTTACCTCTGGGAAGGGAGAGAGGAGAATGGGATCAGGAGGGACTTC
GACTGTATCTGTAATGTTTTATTTCTTAAAACATACGAAGCAAAAAGGCA
AATGTTAANATTTGNTAAATCTGGGTGGTGGGTACATGGGTGTTGATATC
TGTATACGTTATTTTCCGTACTT
>rnd-5_family-373#LTR/ERVL ( Recon Family Size = 95, Final Multiple Alignment Size = 75 )
AATTGAAGAATCTATTTGTGTGGGAGAAAACCCCACACATCTGGTGTCAG
AAGTGTTGTGATGTATAGAAAGGAAAAGTTTTTCTTTT
>rnd-5_family-565#DNA/hAT-Charlie ( Recon Family Size = 81, Final Multiple Alignment Size = 75 )
CCAGAATGATGGCAGGTGGCACAGAAGATGATTTTAGGTGNTGCGCGGAC
ACGGCATTAAATAACACTGAATCACATAGTGAGAAAGTTATTCCCTTTTC
AATTCTTTCTCAATCCTTCTGATTACATCAAGGAGAAAGTCTCAGTTTGG
TGCTAGTATGTCTTTAACACCTCTCTAACACTTGCTAATCTCCCTTTTTA
ACAAAGAGAGAGCAGGGCCTCAGGCTCAGAGCCTTCGGCAGGCAACGGTA
TCTAGCTAGAATTTAATAACGTTGTTTTGTTTTCATTGTTTATAGTTACC
TTCTATTTATGGCAAGTGATACTGGTTTTCCATTTACGGTAGTGATATAA
AAGNTTTCTTTTAAAATAAAGTTTAAGTATGAAAAAAGAGTTGTGGAAAA
TATTAAGTAAATAATAGTACAGTGGCACAGGGATACGGCAAAACGATGGA
GTAGGAAAATGACCGAAGTTTGGGAAAT
>rnd-5_family-738#LINE/L1 ( Recon Family Size = 75, Final Multiple Alignment Size = 74 )
TAAAACTCACTGGTAAAGGTAAGTATATAGTCAAATTCAGAATACTCTAA
TACTGTAATGGTGGTGTGTAAATCACTTTTAACTCTAGTATAAAGGTTAA
AAGACAAAANTATTAAAATAACTATAGCTACAATAATTTGTTAATGAATA
CACAATATANAAAGATGTAAATTNTGACATCAANAACAAAATATGTGTAG
TGGGGAATAAAAGATAGAGTNTTTGTATGCAATCAAAGTTAAGTTGTTAT
CAGCTTAAAATAGACTGTTATAACTATAAGATGTTTTATGTAAGCCTCAT
GGTAACCANAANGNAAAAANCTATAGTANATACAAAAAAGATGAAAAGAA

>rnd-5_family-400#LINE/L1 ( Recon Family Size = 87, Final Multiple Alignment Size = 73 )
TAGTATAAGAACAACTATGAACTATNNGTTTGAAGAAATAAANGANAAGC
TTGAAAATATATCCGGATAAAACAAGAAAACTATCTTAAAGAACCAGCAG
ATTTGAAAAAGAACCAAATAGAACTTCTAGAAATAAAAAATACAATTANT
AAGACATGAGNTTAACGGATTAGACACAGCTGAAGAGAGAATTAGCGAAC
TGGAAAATAGATNTCGAAGAAATTATCCAGAATGCAGCACAGAGAGCAAA
GAGATAAAAAATACAAAGACATGGAGGATAGAATGAGAAGNTCTACATAC
GTCTAATTAGAGTTCCAAAGAATAGAAAGAAAGCAATATTCGAAGAGATA
ATGGCTGAGAATTTTCCAGAACTGATGAAAGACATGAATCCTCAGATTCA
GGAAGCACAACGAATCCCAAGCAGGATAAACAAAANAAATCCACACCTAG
ACACATCAT
>rnd-5_family-2543#LINE/L1 ( Recon Family Size = 91, Final Multiple Alignment Size = 72 )
AGCCCAGCATTTCTCCGAGGAGGAAATCCCAGAGNCAACCCACAGCCCCT
CCGCCATTGCAGCTGCAGCGGTACCGCCCTNACTGCCCTCGGGCTGGGGA
AGGAACAAAGGGCCTAGTCACTACGCTGGCACCTCCAGCACACCGCAGCC
GCCATACGGAGAGGAGCCCAGNCTCTCTTCCCTGGGAGCCCCCACCCCTA
CTCTTCACCAGGCAGGGCCCCGGCTCATGACCGCAGAACAGCCGCCCCAC
CCACGGCTGAGCATACCCACTGGNAGCGGCTCTGNGTTTCCCTGGGGAGT
GGAGCTCCCAGAGGCANCCGACAGCCCCTCTGCCACTGCCGCNGCAGCGG
TTCTACCCCTGCTGCCCTCGGNCTGGGGAAGGAACAAAGAGCCTGANGGC
TNCGCTCGNGCTTCCAGCATGCCACAGTCACCATACGGAGAGGAGNCCAG
TCTCTCCTCCCTGTGAGCCCTCGACCCCCTGCTCCCCANCAAGCGGAGCC
CCNAGCTCGGGCCAGCAGCGCAGCCGCCCCACCCCACTGGCTGAACATTC
CCAGTAGCAGCGGCTCTGCGTTTCTCTGAGGTGGAGCTCCCAGGGGCAAC
TGAAAGCCTCTCTGCCACTGCCTCTGCAGTGGAACTGCCCTTGCTACCCT
CGGACTAACGAAGGAGCAAAGACCCTAAGTGCCTTATCCACACCTCCAAC
AAGCTGCAGTCGACCCAAGGAGAGGAGGCCAGTCCGTCTCCCACGGGTCC
CACCCACCCCCCACTACCTGCTCGTCACCAGACAGGGAACCCCTGGCTTG
GGCCCACAGCACAGACCTCCCCATCCTGGGCTGATTGCACTGAGCGATTG
CTGACCTGCATCTCTCTGGGGTGGAGCCCCCAGGAGACAAGCGAAAGACC
CTCGGCCACAACCACTACTAAGGTCCCTTCCTCTGCTGCCTCCAAGCTGG
GGAGGGAACATAAACNCTGAGATCGCCCCAGAGCTGCAGTGGGCAGCCCA
GGAGTGCCAAGCCGCGATCTACAGCCAGCACTCAAGTGGGAGAGGAGCCC
ACACTTTCAGAGCACTGAGAGGGAGCACGGCTGCAACCGTGAGGAAACAC
AGGGGAGCCACACGGCTGAGCAAGAGCCTACCAACTGACCANTACGCCTA
AGCGCCACCTACTGGATCACACCCCAAAGCTTCAACACCAAAAATACCTC
GCTAACATACCCCCCTGTGAAACCAAAGACAAGAAGTCAGCTACAAATAA
AGACCCTGCACAAAGCCTCGGCCCTGTGAAAACATCCAGAAAAGAAGTCT
ATTGACTGTACTCAATCTACACTGCAGTTAAAGGAACACCCACACGCAGA
GATGAGAAAGAACCAACGCAAGAACTCCGGTAACTCAAATGGCCAGAGTG
TCGTATGTCCTCCAAACGACCGCACCAGTTCTCCAAC
>rnd-5_family-1775#LTR/ERVK ( Recon Family Size = 81, Final Multiple Alignment Size = 72 )
TGGGTCAAGATGGCCAGGGGCAGACCTATGTTANTTCTAGCTAAATAATT
ATAAGCTTGCTTGGCTCAGAGTACACTGAAGTTTATACACCGAACTAAAC
TATATTATTGGTGCAGTTAATTAGAAATCAAGCGGCAACAGGAGGCCTAA
GGTAAAGACCATCCGAGAGCGCAGTAACACCGGGGAACACCGCGGGGTGG
TTGCAGAGCAGGNAATACTGCTCTGGTCCCACGAATGCCTTCTCAACATG
GAGACTGCGTGAGGGCCTCGTAAAGAGGGCTTGTGCAAAGATCTCTGAGA
AGGGAGGCGACCTCTGCTCACAAGATCCGGGAGGGTCTTTGCAGATGGGA
GCTGGCAAGGAGGAGAAAAGCCTTGCAGGGCAGAGATCACGGAACGCCTC
AGGCTCTGCCTAGGTTCTCGGAATATGGAGTGATTTTAATTGCTCTGTGT
CCTCAATGCTCGGGAGATAAAAGCCCCTTGATGCATTGGGTGTGGTCAGA
CCNGGTGGCTCCTCATCCGCTATACTTCTGATGCAGCCGCACCCTGATAA
CAATCGGTGATAAACTCAGAGTACTAGTTTAGCATGTCTTAGAAGGACCN
CANNTGCTATTGAATGCTGCAGAGCACCAGTTTAGCGTGTCTTAGAAGGA
TCTCAAGTGCTGTTGAATGCTCAGAGCACTAGTTTAGCATGTCTTAGAAG
GATCTNANGTGCTGTTGGATGGTCAGAGCACCAGTTTAGCATGTCTTAGA
AGG
>rnd-5_family-1230#DNA/TcMar-Tigger ( Recon Family Size = 75, Final Multiple Alignment Size = 70 )
CAGCAGGTCCTCGAATAACGTCGTTTCGTTCAACGTCGTTTCGTTATAAC
AC
>rnd-5_family-6453#LTR/ERV1 ( Recon Family Size = 80, Final Multiple Alignment Size = 69 )
AAATTTAATTGGGAGGCCATTAGGCTGAGACGGCTCCAGCGCCTTGGGTT
CCTACGTAAGCAAACCGAAACCCAGTGTAAACAGTAAAACGAAACTTAAG
CTTAACCAATCAGAAACCGCCAACTAACCTCTAACTAGGGACTTTCCACT
TTAACCAATCAAATATATTTTCTTTGTCTTGCTTCTGCACCTTATAAGTT
TCCCCCTTGCCTGTTCCCTCGGTGGAGCCCTGAACCGCTTNCGGTCTGGN
GCTGCCCGATTCATGAATCGCTGTTTGCTCAAATAAACTCTTTAAAATTT
TANTGTGCCTNAGTTTACCTTTTA
>rnd-5_family-1769#LTR/ERVL ( Recon Family Size = 82, Final Multiple Alignment Size = 67 )
CATNCATCTTGACATGTTAGATTGTTCTGTTGTCAATTTGGTTAAGCTGG
GAATTCCCTTCCCTGCACGGTTCCGGGTTAGAGTTGGCCAAAANAGGAAC
TTGCGCGAGGTTTGGAAGGCGGAAGTGAAGCAGANTCCTTCACTCTGAAG
GTCNTCGNGTTAGATGGGTGACAGACGCAGAGGTGCCGCAGGGGTTCCAG
CTTGTCCTCGCTCTCCTCTGCTCCGCGTCCAGCTCTTCTTCCCGACTGCT
GGCCTGACAGCCCAAGGCCCACCACCAGACGCTTGGCTGGGACCCAGAGC
TGCAGAGGCGGTAGCTACACAGAGGCAACGGCTTCCCATAGACCTCTCCA
CGAGTTCCCTTCGCGGTCCCACTTCGGCGGCTGGACGTGCCTGGCTTCCC
AGATTTTCCTGCAAGCTCCGACTTGTCCACCCACGCAGTGCTTTCAGAAG
ATAGTTTAGACTCTTCTCTGATCCTCCAACTTCTCCTTCCGGACCTTCAC
TTCCCCAGCTCCTCCCACAATTGTGTAAGGTCTAATTCCTATAATAAATC
CCTTATTCCATAATACTCATAGTGGCTCTGCTTCCCTGACTGAACCCTGA
CTGAC
>rnd-5_family-3062#Unknown ( Recon Family Size = 72, Final Multiple Alignment Size = 64 )
TTTNCAGGTAGTTTAATTGCCTCCTGAACACCGAAATAAATGACACATNG
AAAGACATCCATGGAACAAAGGAACAATGTGACTGAGTTCGTCCTNCTGG
GNCTCACTCAGAACCCCCAGGGACAGCANNTCTTCTTCGTNGTNTTCTTN
NTCATCTACGTGGTCACNNTGNTGGGNAACGCGCTCATCGTNCTGACCGT
CNTGGNCAGCTCANCTCCACACCCCCATGTACTTCTTCCTCGGCAACCTG
TCCTTCGTNGACGATGTCTGCTCTNCCGCCGTCACCCCAAGATGCTNGCG
GACTTNCTCTATGAGAACAAGACCATCTCCTTCGNNGGCTGCGCGGCCCA
GCTCTTTNTCACTTCTTTGGCGGCGCTGAGATNTTNCTCCTGGCNGCGAT
GGCCTATGACCGCTACGTGGCCATCTGCAANCCNCTGCACTACNCNACCA
TCATGAGCCAAAGGGTGTGCATTCTACTGCTGTCGCTGGCCTGGGTCGGN
GGCTTCCTGCATNCCGTGGTCCACCTTCCTTTTGTCTCAGNCTGCCCTTC
TGTGGNCCCAACGNNATCGACCACTTCTTCTGTGACGTCCCNCCNGTGNT
NAAGCTNGCCTGCGCNGACACCTACGTCATTGGCCTCACTGTGGTTGCCA
ACGGTGGGGCAATCTGTGTGGTCACCTTTNTGCTCTTACTCATCTCCTAC
GNCNTCATTCTGCACTCCCTGAAGATCCTCAGTCAGGAAGGGAGGCGCAA
GGCCTTCTCCACCTGTGCCTCCCACCTCACNGTGGTNNCCCTGTTCTATG
GNCCCTGCATCTTCATNTACGTNCGGCCCNCTTCGACCTTNCCCATGGAC
AAATCCTTGCTGTGTTCTACACCGTCGTNACTCCNATGCTGAACCCCNTN
ATCTACACCCTGAGGAACAAGGANGTGAAGGNNGCCNTGAGGAAGCTNTG
GAGCAGAAAAAGAAAATGTAGTGACAAACANATGTATCATCT
>rnd-5_family-11080#LTR/ERVL ( Recon Family Size = 72, Final Multiple Alignment Size = 64 )
GGCCTAAAATTAAGGCTCAATATTATGTGCTGCCTTGACATCTGGTGAAA
TCGGGAGGGGCCTCGAATGGCCTAACCGCAAGTTCCCCTCCCCACTCTGC
TCCCGTGGATAAGGTCCCCCAGCCAAACAACCCTCCTTATCAAGGGGACC
AGGCGCAGTTCCTGCTTATCCCTGAGTAGCGGGTTTCAGTTCCCTGCCAG
CCCGCGGAATTATTCAAACAAGCCAATCACATCCTCCCGCGGGAACCAGG
GGGCACCTCACCCTCTTGNTACTACAAAGCCTGCCTCCCACAGCCCCTGC
TTGTTCACTCTGTTCCCGAGTGCAACCCCCGTGTGGCCCTGCGTGGCGTG
CGGTGTCCTCCCCCGGGCTGTGAGTATATGTGACTAATAAACTGCTGTCG
ATCTCATCTGTCCAGTGTCGGGTGTCGTGTGTTCGGCCATCCCCATAACC
CTAGGGCGGGAATCCCTCCCTCACCAACGGGGTGAANAGGACAGAAAATA
CTAA
>rnd-5_family-1698#LINE/L1 ( Recon Family Size = 79, Final Multiple Alignment Size = 63 )
CATTATTCGCAGATGACATGATTGTCTACGTAGAAAATCCAAAAGAATCA
TACAAATAAATTCNTTAGAATTAATAAGTGATTTTAGCAAGGNTTGCNGG
ATANAAAGTTAATATACAAAAGTCAATTGCNTTTCTATATACCAGCAATG
AACAATTGGAATTTGAAATTTAAAACATAATACCATTTACANTAGCTACC
TCCAAAAATGAAATACTTAGGTATAAATCTAACAAAATATGTACAAGATC
TATATGAGGAAAACTATAAAACTCTGATGAAAGAAATCAAAGAAGAACTA
AATAAATGGAGTGAATATATT
>rnd-5_family-542#LINE/L1 ( Recon Family Size = 94, Final Multiple Alignment Size = 63 )
AGACGGANATGGAGCTGCAGCNGGCACAGAGCCAGGGACCTTTGAGCATG
GGNCAGCTCCGGTAGAGCCCGGCCATAAGCGCCCATCCCCCAGGGCTGCC
CGTCTCCCTCCGAGAGGCTCTGGCNCCAGCTAACCGCNAGGGGGAGAGAG
CAGGGCCNGCTTCCCCGCGGGACTGGGGCATATCTGTCCTGCAGGCCCTC
CTGCCCACCAGCCCCTCCCAGGGCCCCTGCCTGGCCACCCCGCAGGAGCA
TGTACACAGTGCAGCCTCCACTGCCCAGCCTGAGTGCTTTGCTCCACCTG
AGTGCNTTCCGGCGACCTGGGAGCACTTCGGATCCCCCANAGCACCCGGA
ACCCGACCCCGAGGGTCCGGAGGACGGAGCCGCGAGCNAGTCCCGGCGCC
CCAGGGCTGCGGCGCGCGGCTCGGGAGTGCCGAGCCGAGATCTGTGGCCG
GCACTCGAGCGGGGGAGGAGCCCNCACTCTCAGAACACTGAGAGGGGTGA
GATGCACGGGTTCGCGGGCCGGCGCGGGAGCNGGGCGTGCCTCCCTCCGC
AGGGCCGGTCCGGAAAGGTGTGGCCTATCTCCCTGCCGNAGCCTCTGCCC
GAGGGAGCCCCGCGGCCCGGAACACCTAACAAAAGAAATGCGGGCGCAGT
GCCAGTGATCGGAGGGGGCTCCCCCAAGGCCCAGGAGCGGACCTGGTGAG
GGGGTCACCTCTCTCCCCCTCACACCACACAGAACACGGCTGCAAACGCG
AGGATACAAAAGAGCCACGCGGCTGAGTAAGAGCCTATCTACCGGCCATT
ACTCTTAAGCGCCATCTACTGGATCGCAGCCCAAACTACAACACCAAAAA
TATTTTGCTAATATACACCCCTGTGAAACCAAGNGCAAGAATTCAGCCAC
AAATAAAGACCCTGTACAGAGCCTTGGCCCTCTGAAAGCATCCAGAAACG
AAGCCAACTGACTATACTCAACTTACACCACAGTTAAAGGAACACCAGCC
CTCACAGATGAGAAAGAACCAGCGCAAGAACTCTGGCAACTCAAAAAGCC
AGAGTGTCTCCTTACCTCCAAATGACCGCACTAGCTCCCCAGCAATGGTT
CTTAACCAGNCTGAAATGACTGAAATGACAGACATAAGAATTCAGAATNT
GGATAGCAANGAAGNTCANCGAGATTCAGGAGAAAGTTAAAACCCAATCC
AAGGAATCCAGTAAAACGATNCAAGAGCTGAA
>rnd-5_family-6513#LTR/ERV1 ( Recon Family Size = 66, Final Multiple Alignment Size = 62 )
TAATAACCTANCCTGTGCTAGCCTAACTGACTCCATCTTAGCTGTAAACT
CCANCTTAGCTTCTCCCTCCCTGCCACGGCCCCCTCGGGTGCATAACTGG
GTCACGCTGCACTCAGAAGCTTTGAACCGTTAGAGTGGTTCACACTGTTC
NCAGCACCTGTAACCATTGTAACCGCATCCTGCTTGGCAAGCCCACCTGC
TATTGTGAATACCCCCCTTGGTGATTGATTGTATGGAAAGTNCCTCCCCC
CTGCTATTGGTACCCCCTTGGTGATTGTATGGAAATACCCTTAGCAACCA
ACAATCATGGGAACCTCCTGCC
>rnd-5_family-279#LTR/ERVL-MaLR ( Recon Family Size = 100, Final Multiple Alignment Size = 62 )
GGAAACGCCATGTGAAGATTGGAGTTATGCTGCCACAAGCCAAGGAACTA
CCAGAAGCTAGGAGAGAGGCCTGGAACAGATCCTTCCC
>rnd-5_family-2690#LTR/ERVL ( Recon Family Size = 75, Final Multiple Alignment Size = 62 )
AGCATGGAGGTACGCCGCTCAGATCTCCCTTCAAGAAAGAACCTGCTGTC
AGCTGCGAGGAAGTGCAGTTAGCTGACAGCCTCCAGCTGCCGGCGCCTTC
AGGATCCGCCNCAGCTTTCGGCCGAGGCCACGCTCTTCCCGGGCAGCTCC
CAGCCAATGACTGAGCACGGCGGNGGTACNAGGGCCTGGCCATTTCCGCC
CAACGCGGGACTCCTCTAACGGGCAATCTTTGCTCCGAGCTCCCTCATTG
GNGCTGGCAGAGATCTTCTTGTCAGAGCCCTGGTCANAATGCTCCCGCGT
CCATCATCTTCCTCCTCTTTCCTTTCCTTTCACAGGTGTTACTCCNCAAT
AAGCCTTTCGCACTCCTAACTCCGTCTCAATCTGCTTCCTAGAGA
>rnd-5_family-5312#LTR/ERVK ( Recon Family Size = 68, Final Multiple Alignment Size = 61 )
AGGAGATCGGTCAGGGTGGTGGGAGAAATTATAGAANAAAGACGCACAAA
CCTTCTTGGAAGGCCGGAAGGTTTTGCAAAAGCCTCGGGAAAGAGGTTAT
GGCTGAAGGCAGCCTAATCCTCTTACCTTGAGCTAATAGCAAAGAGTAGA
TACAAGGGAATGTAGAGGAGTTTATCTAAATAGCTTGTTTACTCATGTGG
TCCTAAGACCGACCTTTGATCATCTGCGGGCGGCATGACTGCTCTCTACT
CGGGGGGGGTGATCAGCAATGTTAATTACCCTCTAACAGTGTTTACTCTG
TACTAAATAAATGCAAAGGCCTCTGCAGGCTTATCGGGGCAGCTACTGAT
ACTGTGAGCCGNGGGGCCCCCTAGCCGCGCTCACAGGCAAAACACCTGTG
TCTGCGTACTCCTTTCATCCATCGCT
>rnd-5_family-3003#LTR/ERV1 ( Recon Family Size = 90, Final Multiple Alignment Size = 60 )
TTACATTTTGGCGAGCCAGCCAGGAGAGGGGTACACCAGAAAGAGGGGTA
CAGCCAGGAAAGGGGTACAGCCAGGGGAAGAAAGACTTCAAAATCGTGAG
TAAAACCGGCCCCATTCTGTCCTGTCTCTTTAAGAACACCTGAAGCGGCG
CAGCCAGGCAGGGCCGCGGGGAGCCCGTGCGGCCCAGCCGGAATTAAAAG
CGCAGTTTTTTTNNCTNNNCGCTTTCGTTTTTGTTTCTGTCTCTCTGCTT
TCCCTCTCCTTCTCTATCCTTCGGATATTATCTCTGGGACCAAAACCTGC
GGGAGCCTGTGGGGCGGAGCGGGCGAGCACTGCCCCCGGGCCTTTCGCTC
CTTGCCGGCCGGGAACAGCCCAGCCCCGGGGGCGGAACCGAGTGCGCAGC
CGCGGGCCGGAGAAAACAGCGGGGAGGGGCGAGGTACAGCCCGAGCCTGC
AGGGGACCGGGGAGCGCGGCGGCCTGGCGCATGGTTCTGGCAGGCCTCTC
CGGCGTTCCCCAGTCCCAGGCAGCAGGGTAAAAAGGCTCCCCAGGGCGTT
CGCCTGCCGGCCGCGGGTCCCTGTGTGGGCAGCGGCTCGGGGAGTGGCCC
AGGCGCGCACGTGGTTCTGGCGGGGTCAACATGGCGACCGAAAGCCGCGG
GGCGGGGGAACTCACGGCGGCCCAGCAGCGGCTGCGAACGCGGCTTTTAA
ACTGACAGCGGCAAGCGGCTTTTTTCCTCTGCCGGTGCGCGCTCTGAGGG
AAAGGAAGCGGCTGAAGCGGCTGCTGGCCGTCAGCCCCGCCCGGCTTTCA
GGCAGGCCACACCGCCTCAGGGTGCAGCATTCTCATTCAAAATACGGCTT
AAGAAAGCTTTCTGCCTTNCCTTAACGCAAGTGGCCTGTTNGCACAGTTG
GTTAAGGTGTAGGGCCTGCAACTGCAAGGTTGCTGGTTCAAATCCCTGGT
GGAGTCAGTCTTGATTTGGGGAAACCTTTTGGGGGAAATTCAGAAGCTGA
AGGCTATGGGACTTTGTGTTTNGTGTACAATTTGTCTTGCTTAGGATTGG
CTCTCTCTACGGCAGAACTTCTCCATCTAGAANACCATAGTTAAACCGGN
TCCAGGGCCAAATAGTTAATNGCAGGTCTCACAACCCTAAGGGCATTTTC
CTACGATGGAAAATGGGTTGGGGGAGAGGAGGCCCGGGTCCTGAGGGCGT
TGTTCCAGCCTCAGCCACGTCGGCCTGCCTTCTTTAAACTGTGTGCTCTA
ATGGCCCCTCCCTAGAAGTTTACCCTCCTAGGGCAGTTTTATAATCNGGC
CTGTGTNAATTGGACTTTTGCTGGGGAATATTGGTACCCATCTCCCGAGC
CTCACTGGCCGTCACTGGAGGTCATGCAGGCAGTGAGNGGTGGTCCCATG
ACGCCGGTAGGTCGTGATTNAGAATCCAGCACATGGGAGGCCCTCTGANA
AGATGGATCACGCATCTTGGGCACACGAAATTTCGGGGTACTGACTGAAG
ACGTTTCATTTCAGTACCCATTTTACCTGGGGGACGCCTCAGGTCGAAGC
GGCTGTAAAATTTCTTTAACCGGGGATGCGGGCATCCCTTGTGTTCGATT
TCAGATGGGTGCTNCTNTTCCCAAGCTCAAGTCCCCATTAAAGTGTATNC
TGGAAAATTGGGACCAATTTGACACACAGTCTTTAAGGAAGAAGCGGCTC
ATTTTTCTCTGCCAAACAGCGTGGCCAAATTACCCTCTGCCGAGTGGAAA
ACCTGGCCCCCAAAGGGAAGGGAAGAAAACCCAACAGCTTTCCTTGAGCG
ATTGCGGGAGGCCTTAAGAAAGTACACCCCCCTGTCACCAGACTCCATTG
AGGGTCAGTTAATACTAAAGGACAAGTTTATTACTCAGTCAGCAGCAGAT
ATCAGGAGGAAGCTCC
>rnd-5_family-159#DNA/TcMar-Tigger ( Recon Family Size = 63, Final Multiple Alignment Size = 59 )
AGGCATACCTCATTTTATTGCGCTTCGCTTTATTGTGCTTCGCAGATACT
GC
>rnd-5_family-2877#LTR/ERV1 ( Recon Family Size = 65, Final Multiple Alignment Size = 59 )
CTACCCCCCAGCATCCAGCTTACTGTCTACATTAACATGACTTTNCTATT
CCACTGTCTTCATTAACATAACTTTACTATTCCAGGAAACTCTTGCCCAG
GCAAATAACTTNATTGTTCATTNCGGAACTTCCTGAAAGACCCATCAACT
CTTCAATAGAAAGCATCAACAGACAGTTTACGCCCNAAGANTCTTGAATC
CCTTGCCTCAAAATACCTTGCTGTGTCCACCAATCCTAAACTATTATATC
ACGANCCTTGCCCAATCCATTAACTCATCAAGCCCCTCAGCATTGAAAGA
CCCGCCTTAAACCAGACTTCAAANTCTCAATAAATTCTGACTTTGCCTTC
CCCTTCCGAGACACTACTAAGGCTCTGTCAAGGTAGTGNTCTCCCTTACC
GCAGTAAGAATAAACTCAGCTTTGCCTTATCAACAGGTTGTTTTGGTGAT
ATTTNGGGAGCTGG
>rnd-5_family-975#LINE/L1 ( Recon Family Size = 78, Final Multiple Alignment Size = 58 )
GTTTTGTATATAACTTGAATTTTTTCATAAATATATTTTACAGTCTGCAT
AATTACTAGGTAAGAAGACAAGTAAGTCACTTTAATAAAAGTCCTTCCAA
TTACTGCAACTGATTTCTACAGCCAGAATGTTCCCAGAACCTGAAAAGAG
GAACCACTATAACTGGAAGGCAGAAATACTGACACTAGAGGTCCAGAGCT
GGAGAGGGTGTATCTAATGCAGCAAATGCATCAGCAGCCCTGATCGGCAT
CTTTGAGAAACCTGGCAATTTTCCGTGCTTAATAAATGAGTTAAATTGAA
AACAAATCCATGACAGTTGTGCATGAGAAAGGTTACATGTGTCCCGAATA
ATAAAGTCTGTGCACAATATAAATTAAAACATACCATTTTACATTCATAA
GATTGGCAAACAAAAAGTAAAAGCCTAGGAATATCAAGTGAAGCCAAACA
CGAAACAAGCTTCCCCATATTGCCTGTGGGAATACAAATTGTTACAACTA
CTTTAAACTATTGGAAATTCATAGTAAAAATGAAGACAAACCTCCCCTAC
AATTTACCAATTCCTCTTCTGGGAACACAGTGAGAGAGATTCTTCCCAAG
AAACCTGCACACAAATGTATATGGCACTATGCATGTAATTGTACATCGTG
TTATTTCCATATGGTAAAGTATTATTCGGCAGGGAAAGTAAGTAGACCAG
AGGTAGACATTTCAATATCAATAACTTTTATAAAGATAAAATTGAGTATA
GGAAGCTGCAACTCTATCTGTAACGCTTTGTTTTGCCAGAAAAAAAGGGA
CACGTGGGGAGGGCAAGGGACAACAAAAACTAAACAATCTGAAACACATG
CAGAACAGTACCCGTATTTTAAAATTTTCCATTGCTTCTGATATTATTTT
CTGTCTTTTCTATATGCTTGAAGTACTTGATAATAAAGAAAAATATAAAA
GGCATAGGAAAGAATATTCTGAGAAAATACATCAAAATGTTTATGGTTAT
TAGCTTTGGTAAGATTTTAAATGACTTTAATTTTCTTTTCTATACCTCTC
TATATGTCCTAGTCATACCATATTAAATGTGTATTTCATTTATGACAATA
AAAATGTATTATTTTAAAACTCATATATATACAGTTTTTTTCTGACATAT
GATGAAACTATACGAAACATAGATTCAGCAAAAATACTGAGAACTAGAAC
AAAAATAATGATATTAAGAGTTGTTGACTTTTGGATGGAGCTATGAGTGA
CTTTACGTTTATCTCTAAACTCAATTTTTCTATAGTGGGAAAAGAAAATA
TTTGTGAAAGCTGGATTAAATAAAAAGCTATAGGTTTTAAATAAAAAGGA
ATTCAAATAATTTTCCAGCATTATGAAATGATCATATTCCTAAATATGAA
CTAGTTTACAAAAACATCAGTGATTTTAAAGAAACATTAGATGATTTTTA
AAGGAAGTCTNTTATGATACTGCAGTTTACAGTGATACTGAGTGTTTGCT
AGCTCCACTAATCAGGATATTAAGTTAAATAATATATAATATGCCATAAA
GAAATTATATGAGCAGAGGTTACTGCAACATGGGAACACAACGATTTTAA
GTGGCCTGGTGACCTGAATTTCTTCCAGTGAGAGGGAAACATCAGTCATT
TGATCAATGAAATGCCTTTTATAAATCTTCAGGAAATCTCCTATGAAGCC
TTTAAGAAGATGGATTTCTTATTACTTCTGATATATGTTCCCATTAAATT
TTTACCATTGCCCCCATGGGCCTGCCCAGCCTAAGAGATGGAAACTGTGA
GTCCAGCCCACTGACACCCACCATCTGTAAGATTCTGGCACACTGAGGAG
GCCATGACCAGCCTGTCGAATGAAATCTAGAATGTAAAATGATGNTGCTG
CTCCAGCAATCCTAAAACCCTGCCCCAGAATCAATGCAAAGCTGTGTCAA
CCTTGGAATTTCCATATGCCTAGGCAGATAGTTATCTTCAAATATAAGAA
CAGTATCATTTTCTGGAGAAACCAAAAGAATCCACAAAAATTCTACAGTG
GTCTCCTCTGCCCTTCCTCCCAGTTCCATTTTGTTAGTAACAGCCAAATC
CAGGCACACAGATGTCCTAACTTCTACACCTCAGGTTGCCCACAACGTGC
GCTAGGTGATGCATCTTATAGAGCACATGTGCAAACAATTATGGCATCTG
AACAACAATAACTCAGGCAGAAATATCAGGAATTCGTGCCCCTAAGTGAA
CCAGTGGGAAANAAAGGAGGCTTAGAGAGTTTAAACAACTTTCCCCAGTA
GCTGATAAGCTACGGTGGCCTTAGGCAAGCTGACAAGAGTGGTAGCAAAA
AGGTTTCAAGGATTATAAATTGTTCTACTATAAGGTTTCAAAAAGGTTTC
AAAGGCAAAGAAGAGTAAATGAAGCCATGAATTTTACAATCTACATATGT
TTAGCCCTTTCTCTTTTGCGCTTTGCTTGGGTAAACTAATTAGACCCTGC
AAACACATTCCCACCCACAATGTTGTCTCCACTGCTTTAGGGCCTCACCT
CTGAGTAGCCAGAGGAAATGCAGCTGACCCCTTATCTAGTTATTTAACGA
CCTCCTATATTCTGTCCTTTCGCTTTGCTTTCTCCATGCCAACATAAGAC
ATACAAAGATTTTTCTGCCTCCAAGATTCTGCAGCTTTCTACTCAGCTAA
TTACCCCAGCTAAAAATCACTGTTCCACATACTCAGAGATATATGGCAAT
CAAGCAACCGAATGCCCCTTTTGCCAATGACATGTTTTTATTTAATATGT
TCAATGAGATGCTCTTTGAAAATTATTCACTTTCTTTTGAGTTGCAAAGG
AAAACAAAAGGCAAATTATGGCTATATAAGCAAGTGTTTGCACAGATCCC
ATTAATTTGCCATCCACAGGGCTATTGACAACTAGCTTTCTTCTCTTGTC
ATTTTGCTTACCAGGCAGAAATGATTACAAACTTAATTTCTTTGAGGGGT
TATTTAGGTTAGAGAGGGCTCCTTGATAATGCAGAAGTCATAACGGCCNC
CAGGGACAGTAGAACAATAGCTCCCAGTGCTTCCACAGTGGAGAGAGAGA
TAACTGAATTTCAGATTTTGAAGGAANTGAAACCATNATTTATTTTTTCA
GATGAAAAAACTGAGGCTCAAAGAGGTTAGGGGTTAACCAAAGTCAGTCA
ATGTTTTAGTTTGTAGCAGAGCTGAAAGCAGGCGCTAAGCATTGCAACAC
CTGGTCTCTCTCTTGCTCCCCTCCATCCTGCTGCTAGTAGTGTCAGTGGC
AAACACAAGGCAGTTCAAGGAAACGTGGCCTCAGGGAGGAGTACTAAGGA
CCAAGCACCAATGCATCTTGCCATTTACAACAAATTCCTTAATTACAAGG
CTTCATTTATTCACAGAAGCTGCCTCTCTTGTACATAGCCCAGCACACAC
ACACACACACGCACACACACACACAGTGTGACAGAGATAATTTATCATTA
TCTGAACGCACTCAGGGTGGTCAATTTCAGCCAGAGTGAAGAACAGAGAA
AGGCAGGGTCAAGGGCACTATAGAAGTAGCTGTTCCTGCTTCACTTTTCA
GCCCTCCGCCCCCTCCCATCAGCCCACTTTCATTACATTTCTCTTTGATG
CAAAATCTGGAAATCTTGGTCAGGCAGCTCTGCTTATCAGTGGGTTCTTA
ATAACCCACTTTTATCAAACTTCATCTGATGGATCCAAAATATATTTGAT
CTTAGCAAAAAGTACCCTTATCAGTCCTAAAATGACACTGCCCAAAAGTG
AATAGTGTTAACAGCCAAGTCTCTAGAACCAGAAAGAAGTATGTTTAAAT
CCTCAATCCATCACTTTCTAGCCATGCTGTCATGTCCAACTCATTCTCAT
TCAACAATATCTCACTAAGCACACTAGACTGTAGGAATGCACACAGATAG
CACCTTAACTTTCTTGGCTTCATTCCTGGGAGGCAGCAGTGGACACTAAC
ATATCTGTCACTCAAGTTAATGTAAAGGATTAACTGGTACAAGTGCTGTG
CAGGCAGGTCCCTGGAACAATGAGAGCACCCAGGAGAAGGCTTTGCTTTA
GTNACAAAGGTCAGAAAATGTTTCCCCTAGGGAGGGACTGAGATCAGAAG
CATGAGTGCACAGTAAGTGGGCAAAGTAAGGAGGATCTGGCATCCCAGGC
AAATATGTGGTGCAGGGGGACCTTGACCTTGGCCAGTACAAGACGCTGAG
NCTTTGCAGTGCAGAGCAGAGAGGAGGGGCATGCCGTGAGGTCAGAGAAA
TGGAAAGGAGCCTGTGGCCATGGTGAGGAGGTTTGTCCTCATTCTAAGGA
GGACTGGGAGGTANGGGGCATGGTCTGACTTATGTGGAGGACAGACTGGA
GACAACATGGACACAGACACACAGGTGGAAGGCCAGGAGGTAATCCACAG
AAGGGCTGCAATGAGAATTTCAATGGAAAGAAAAAACAGAAGCTAACGGA
TATTTAAGAACTAAAATCAGCAGGTCTGAATGGTAAGTTGGATATGAGAA
GTGAGAGAGAAAGAGATAAACCAGAGCTCACTCATAGGACTTTGGCTTGT
GTGACTGGATAGGTGGTGGCACCATTTTCTAAAAACCAGAATGTAAGAAG
GAGCAGACTAGTGACTTAAACCTCTGAGCCTCAGTTTTCTCATCTGTAAA
ATGGGAATAGTCCTACCTATATCACAATGTTTTTGAAAGCNTTAGAAAAT
ATTCCTAGAAAATGAAGCCTCCATACAAAGTGGTGTATGGTTCTCCCCCA
AATAAATGGGACCTATTCTTATAGGCTTCTTTTTCTTGATCTGATTGGAA
ACTCAGGATCTCAGATATTCATTTCTTTTCATCCTCTTCTCTGATGGCTC
TACCAAATTGCTGGTTTACTGATCTAACCACCCTAAACAATGTATAATAC
TCCATACTAGTCAAATAGGCAAGTTGGCAATTGCTCTTCTGAACAAATTA
TTGTAAATGTCACTGCTACAGTGCCGCTCATAGTGGCTCACTTGGCTGTT
CAAGGGGAAAAATCTTGCAAATGCAGCTCCTATTACTTGCCAAATGTTCA
TGCACAAATGCATTTATTTTACCGAGAGTGTANTGTTGCGTCATTTAAGG
AGAATGGAAAAACACTCACAATTGAAGAGGCAAAAATAGCATATATACAG
CACTCCAGAGCTTGCAAAGCCCCTTCAGATACACTATACCAATGGTACCT
CACACTGACTGTGGAGAGGCTGAGGGGAGGAGAAAGGGCAGGTATATTCA
TGATTATTTTTACAAGTAAGTTTAATTTAGAAAAAGTAACTTG
>rnd-5_family-1091#LTR/ERV1 ( Recon Family Size = 58, Final Multiple Alignment Size = 57 )
AGTTTACGGTTAAGGGAACAGATTAATAATGTTTACTAAACAGACCCAGA
CTTGGGAGTGTCCTGATATCCCGATATCTTGAGAACAAAGGCATTCCTAA
TTTTGCTTTAAAGATAATATCGATTCTTGCAAAATATAGTAATTAAGAAA
ATTAATCCTTTATCACAAACCCTTGTAGCAGAGCACATCTCCCCATGATC
TTTTTTTATCCTGTATATAAACAAGCATTGTACCTAGGGTGGACGCGTTC
CTCCTCTTACTTTCGGGA
>rnd-5_family-2739#DNA/TcMar-Tigger ( Recon Family Size = 67, Final Multiple Alignment Size = 57 )
TTCTGTAATGCTTGTTTTGAAAACGCGAATTTGTTCCAACGCGATTGATA
TATTAGGGAACAATTAATGTAAATCACGNAATTAAGTTCTTGCTTATGCG
CGATTTCGTCCGCGAGAAACACTAGGTGAACGCAGAAAACTGCACCCAGC
TGAACCGAGCCGCGTAGGAATACGCAAAACACACACGCACACACCTCAAA
CATCTACCAGCTACCTCAGTTCACCATGCATGTGTTATGAGCCACACCCA
TCCACATCTGGTGTTACAACTTTCCATCCGATTTCAGATAACCCTCCTTC
CACCACTTCACAGTAACTCACAAGCTGCAACCCTTCTGACGCCCACTTCC
ACAAGCAAACTTCAGGTCTTTTTTCAAGGTAAAGTGCCATATTTATTGTA
GTATTTATGTATTTCTTAACCATTTAACATGTGTAAAACTGTGCTACCGT
TTTTATTAGGTTCCTATCTTTTTTTAACGTGTCACTGACGAAGTTTTTTA
GTGTTATGCCCTAACCCCATTTTTCCCCATAAGCCCTGTGGTTTTTATTG
CGCGATTTTGCATAGCGCGGTGATTTTTAGGAACGCATATGTCGCGTTAT
AGCAGAAC
>rnd-5_family-980#LTR/ERV1 ( Recon Family Size = 62, Final Multiple Alignment Size = 56 )
CTTTCTGGCAACCACAGAAGGGACTATAGTGCGGAAATCCCGGCAAANGC
TANCTTTGGGTAAGTGTTGGGGTCCGGTAACGTCTTTCTGGCGACCACGG
AAGGGACNATAGTGAGGAAACCCCCGACCCAAAGGCTAACTTTGGGTAAG
TGGTGGGGTCCNGTAACATCTTTCTGGCGACCACGGAAGGGACTATACTG
CGGAAACCCCCGACCCAAAGGCTAACTTTGGGTAAGTGGTGAGGTCCGGT
AACATCTTTCTGGCGAACCACGAAGGGACGATACTGAGGAGACCCCCGAC
CCAAAGGAAATNGACTGCAGCACCGATTGGCCGACTTTGGGTAAGTGGTG
GGGTACATTCCCGGGTAAAGGATGGGATTGGGTTAGAGGCCCAACTTAGG
AGAGTTAGAGTCTCTCCTAAGACAGAGAGGGTTAAAGGCCCCTCTTAATA
AAAGGCAAGGACGCTTGACCGAACTTGGGTTCGAGGCCCAACTTAGGAAG
GTTAGAGTCCTTCCTAAGATTTAGGGGGTTAGAGGCCCCTCTCAGTAAAG
TCCCTCTCGGCTAAGAATGGGTTTGGCACTACGGGATGTTAACTGCTATT
CTCTTTGGATTAATCTGCCTTGCACTCTTTGCTGACGGCTGTGGGTGACA
GAATTAGGCATGTACAGGATCGTGGGACATGGGGAGCTTTTTCCTCCCCA
AAAGGGGAAACTTGAGAGCTGATGGGACTGCTGGAAAAGATCCCTTCGCG
ACCGACAAGCGGCCGCCTGAACTTTTCAGTGTCGCTGCAATGGGTGGGTC
TTTCTCTGGCCTCCCTGAGCTCTTCGCCTTCCCCACCCTGCCGCAGGCAA
TGCTTTTCTCTCTCTTTCCTTTCTCTCTTTTCTGTTACCATCTTGCCCAG
AGACCACATGTTGAAACTCCTGGTCGGAGGTTGGATTAANGATGACGGGG
CCCAACCGGGGGCAAGTTTGAGCCTTGCCAGTTTGATATTGGGTGCTAAG
CAGAGTGGCTAATGTCTATGTTTTGTCACACGTATTTTGCTCTGGCCGGA
ACGGAAAAAGATAATTTTCCTTTGTGNTGCGGCTTGGCCCCCAGNGCTAT
GGTGCGGCGAGCNGGGTCACTAGGGCCGCTCAGGGAAAGGGAACCCAGAA
GCCTGGCATGCTGGCAAAAGGGTAAGAATTTCTTACCAGTCAGACTTCTG
GCCTCTCTCTCTCTGTGCAAACTGGTTGAATGAATGGTAAAAATCACTGT
TTATCTCCTCTGTAAAGTTTTGATTAATGGGAAAAAGGATTTGTGAGGCT
AGTCTTAAGCTGTAGCGAATCTGGTGTGCTTTGCGTGTCTTTT
>rnd-5_family-2974#snRNA ( Recon Family Size = 55, Final Multiple Alignment Size = 55 )
AGCTTTGCGCAGTGGCAGTATCGTAGCCAATGAGGTTTATCCGAGGCGCG
ATTATTGCTAATTGAAAACTTTTCCCAATACCCCGCCATGACGACTTGAA
ATATAGTCGGCATTGGCAATTTTTGACAGTCTCTACGGAGACTGATTAAA
AATTGCCAGTGCCGATTATATAAGAATGTGGATAGACATAGACAGCCCCG
TGTCAGAAACAT
>rnd-5_family-8242#LTR/ERV1 ( Recon Family Size = 58, Final Multiple Alignment Size = 54 )
GTGATCTGAGAGACCAAAATAGATGCCCCTTTATCAACTAAGACGGACCC
TAAGGTTAAGGAAACAAAAGTTACCTACGGGTCGAGGGTTCAGGGCCTGG
CTGGCATGGCAAATTTCTAAATTCCTACGGCTACAAGAAAAACCACACTC
TTGCTAAACTCCCTAACAATAGGAGCTATCAGGCAAATTATCAGACCCCT
CCTAATCTGATTTACAACCCAGACCACTACAACTCTGATTGGACAGAGGA
CCGGCCTTGCAAACATTCTCTCCTGTAGGCATCGGACTTAAGCCAGTTTC
AGCCAGCTCATAGAGGCTGCACAAACTGTCTTTGTGTCCTATAGTTCACC
TTTTGACGTAAANAGCCAAATTCCACCTCATTTTAATGCTAAAACCCCGC
CCCAAAGTGAACATGGGACGTATGTTACATATATGTTTACCCATTGCGCA
TGCGCTCGGCTCCCCTCATAAATATGTATAGCTTTTCCCCAAACCTGCTG
AATACGTATGACTCTATTGTGTGATACAGACCCTGTGAGGCATAAAACCC
AACCTGCCCTTCCCCTCTTCGAAGAGAGAGCACCTTCGGTCCACGCCGGA
GACTNTCTCTTCCCGGTTTGCAAACTGA
>rnd-5_family-9663#LTR/ERV1 ( Recon Family Size = 54, Final Multiple Alignment Size = 54 )
GGCAGGAAAATAGGGTCTGGAGGCAGGGAACATAAGGCCGATTCACACTT
CAGCTATGACAGGAAATATCCTCTCCATAGGGCGTACGCCGAGTAAATGA
CTTTGTAACTTTACTTCAT
>rnd-5_family-1185#LINE/L2 ( Recon Family Size = 67, Final Multiple Alignment Size = 54 )
TGAGCTCCAGANCCATATATCCAACTGCCTACTGGATATCTCCACTTGGA
TGTCCCACAGGCACCTCAAACTCAACATGTCCAAAACCGAACTGTTACCT
TTTCACCAAACCTGCTCCTCCCCTGTTCCAGCCTCATTGATGNNACCACC
ATCCATTCAGTCGTCCAAGCCAGAANNTTGAGAGTCATCCTAGACTCCAC
TTCCCTTTNCCCCCCCCTTCCATATCCAATCCATCACCAAATTCT
>rnd-5_family-3222#LTR/ERVL ( Recon Family Size = 77, Final Multiple Alignment Size = 53 )
CCTGGCCTCTCTTTCCTGACCCCTCATTCATTCTTCTCCACGATGAAGAT
GTGAATTGCTGATCAGTAAGTCTGGNATGCNCAGTTTAATGCCTTCTCTT
TTTTCTCTTTGGGAGCCAGCCTGATCANAGGGAACAGCATTCTGTCCCTG
TATGCGCCACAAGTTGTACGGAGGCAGACTCCCATGAGATGAGGCCTGCG
GTCTTCCCAGCGNTGCCTGTGACTGGGTGGGAAGTTTATTCCGGGAACAG
TATTAGGAAGCCCATTTGGCCNCANATCTAAGCCACATCCTCCAATCTAG
CTTTTATCAGTAATAAAGCTGATATTTTGATCCCCATCTTGCCTGACTCC
TNTGTCTTTATTTCTCAATTGGTTCAGAACTTGGGCGAGGAAGAGAGGTG
TTATTTATTGGGCC
>rnd-5_family-6626#LTR/ERV1 ( Recon Family Size = 55, Final Multiple Alignment Size = 52 )
AAGAATAAATGTNAAGAATGACTTTCCCAAGCATTCTATAAAATGTGGAA
AGAATACGAATAAATATTGATCAATATAACTACTTAAAAATTAAANATTT
ACATGTAGTACAAAAACAAAAGAAATAATACACTGCTATCATATGGAGAT
ATAACTATTGAAAGAAGTATTTAAAAATNATTATGAGTAGATTGACAGAA
AAACGGGGTTTTTGACATATNTTTCTTTCTTTTAAAGCAGCTCCAGTAGC
ATTTCTTGTCTAGCAAAAAGAGCAGGCTTTTAGAGCCGGGNAGGCAAANT
TTNATATGCAAATGCCGGCCATTAGAANCTGGGTCCAACCAAACATGGCA
ATTCCTAGCCTCTCCTCTTCGCCCTTGCCCCAACATGTGCCTGGNAACAT
GGNTGCCGCCACATATTCCCACGTGTGTAGAACATCATGGCAATCTGCAT
CTGCATATTNAAACTCAAGGGTGGGAGGGACAGTTTTTTCAAGAGCCAAA
TCGCTCACGTGCCGAATAAATTAGTCACCAATTCCTCCAGCCTTCTCATA
TAACTGGCTTGTTTCCACATCACTTCGGGTTTCTTCTATGGTCCTTAGAG
TCCCTTTACACCGTCATTCTACAGAAAACCTTTCTTCTTTCTTCTCTTTT
CTTTCTTGCCTACTGAACGCTCTACTNTTTAAAACCACTTCACATGTGTC
TGTGTCATTTTATCCAATTAGAAGAAGACAAGACACCTTGTGTTCCTNCA
CTCACCGGAGCCATATCACTTGGTGTNTGGGTCAGGAATCCAAGGTACGA
CCTTTGTTAGAGTGCTGAATATGGGGGCAAGATTGAAACCTGTTCTATCA
TTCCACAGCATACTTACCCTCTATATTAAAACAAATTAAATAAATTAATG
GGCATCCCTCAGTCTAGTATATGTGGTTAACACTGNCTTCTATACCGAAG
ATATCGATTTGGTGCTTGTTGGTGCGAGCACTGAGAATGCCTCCTTAATG
AGGATTATTGAATTTTGGACTAGCGGGCATCTTGGCATACTCTCAAGGCC
TCTGGAGCAAAATTCATTCTTCAATAGCCCATTCTGGATGTTTGCAGAGA
ATCCTTAACTATCCTCTTGTAAAACTCTTCTCTATCCATAGGCTCTTACT
CCTTCTCTGTAAGAAATGTGCAGAAATTTTTAGTCTAGAAACAAAGTGTT
TCCCTTTACCTTGTGGTGTGGTTATTGCTACCACTTTTCTCGTGAGTATA
TAGCATTTCTAGGCCAACGTCACCACCTACTGGAAATGAAAATTCTCTAT
GGGACACACTTTGTTTCTCTTTTTCAGAGCAACACCATAGCTTCATTTTA
CAATGTTAGAAAGTAGGCTCCAGGCCTCTTCTGAGATGGAAAGTTTCTGC
CTATAGCAAGTAGGCGAAAAATGTTTTCTGTAGTAAAATTCAGTCTCAAT
ATTGTCCCACAGACAGAAAAACAGCCATTCGGTTTTCATGTTTCTTTATG
AAATCGATCATGTATTGTAGTAAGACAGTATTAATTAGTTAAGGTAATTT
TAAGTCCAGAAGTTAATGGGAATGATTTCTCTATGGGCAAATGCTTTAGT
ACTGCCATAATACCATGATATAAAATCTCATCTAGCATGAATTCTCCCTT
AAAGGAGCTTTGCCCAATTGTATAGTTTCTACTCAACACAAAACTTAACT
TTACTTAAATCTAAATTAAGAAGAATTAAAAGCATAACTAAGACCCAAAA
GTTAGTTTCTTTGGTGCCATGTCTTGGAGGGTTATTTNTGCTCTGATGGC
GGGCACCTTTAAATGGGTGTTGAAATTCGAAAGCAAATAAANGAATACGT
TTNTCTCCATTCTGGCTCACATGNTGGAAGCAGAAAGATCATAGGAATCC
CGTCATTCGGGCTTCTCTTTCTGATTGGTAACATATTATCTTTAACATGC
ACACTGCTGGAGTGTTTCTATTTT
>rnd-5_family-2121#DNA/hAT-Tip100 ( Recon Family Size = 55, Final Multiple Alignment Size = 51 )
CACCACGTACGGCTGCACAGGCTGTGCACTGCACAACTCCAGGGGGCGCC
ATTCACATAGACTACGATGTGAATGGCGCCCCCTGGAGTTGTGCAATGCG
G
>rnd-5_family-1464#LINE/L1 ( Recon Family Size = 67, Final Multiple Alignment Size = 50 )
AAAAATAAATATGGGGCGGGGCCAAGANGGCCGACTAGAAACAGCGGCGA
TCGGAGGCTCCCATCGAAAAGAACCATAATAAGCGTGTGAATCCTTCACT
GGCAACCAAGGTATCCAGGTTCTCTCATCAGAATTGACTAGGAGGCTGGC
GTGACCCATCAGAGGAAGGAAGAGCAGTGTGGTGCGGCAGCCCACCTGAG
AGCCACATGGGGCAGGGGAGCCCCCACCCCCCAGCCAAGGGAGGCGGTGA
GTGAGCATGCTACCCAGCATGGGAAACCATGCTTTTTCCATAGAACTGTG
CAACCCACGGATCGGAAGATCCCACTCGTGAACCCACGCCACCGGGGCCT
AGGGTCCCAACCCCGGAGCCGTGCAGATTCTCAACAGCCTCTCAGCTGGA
ATCTGCTTAAGCCTACCGAGCTCCCGGGGGGAGGGGCGACCAGCACCACA
GCTGCGGCTGCCTGCTGTCTAAGCCATTTGAGCTCCTTGGGGGAGGGGCA
GCAGCCAGCACTGGGACTCGCAACTGCCTAACA
>rnd-5_family-1983#LTR/ERVL ( Recon Family Size = 55, Final Multiple Alignment Size = 50 )
AGTCCGGCTCCTGGCTAAAAACCTATGTGTGATTTTTCAGGCCCGACCAT
AGGCAATTACAAAGGCTTTACCTGGCAGGCCTCATGGGGAAAGCTGCCCT
CCCCACACCAGACTTGGTGCACAGCCAGTGCATTGCAGTCTCTGAAGGGA
GTTGCAGTCAAGGACTCAGGCCCCCTGGCCGGCCATGCTCTTACCATATT
TGCATTCCTAGCCCAGGCGCCTTCATTCCGAGGTCTCTTTATCTGAGGCC
TTNGGCAGAGGCCTTCTTCAGGCGCCTCTGCTGAGACCTCCTTATCTGAG
GGGAGGAAGGGGAAACCTTGAAGACACTTTTCCCCACTCTGACTCAGTAC
TCAGTTACTTTTCCACTCCTAGCCCTTCCTTCCTCANCCCCAGGGTCCAT
AAAACTGCAGGAGCCTTTTGTTCGGGGCTCCCTCGGCAGTGAGACGACCC
CCACGTCTGTGCTGATCCACCTGACCCTTCGACCTGTGTGCCGTTCCATG
GGGGAAAATGGAACACGAGGGAGTCGGCGCTTTCTCCGGTTTTAGCCTCT
TGCTTATACTATCGCAGTAAGTGATTAAAGGCTTGACTTTACTTTTCCAT
TTNTGGCTTGTTGCTTTAATTGGCTACTCCGACACCTGGCAGCTCAGCTC
TCTCTCCAGCTCAGCTNAGCTCCTGAA
>rnd-5_family-2889#LTR/ERVL-MaLR ( Recon Family Size = 62, Final Multiple Alignment Size = 50 )
GAGTGGGTTAGTTATCGCGGGAGTGGGTTCCTGATAAAAAGGATGAGTTC
GGCCCCCTCTTGCTCTCTGTCTCGTGTGCTCTCCTGCCTTCTGCCATGGG
ATGACC
>rnd-5_family-961#LINE/L1 ( Recon Family Size = 59, Final Multiple Alignment Size = 49 )
ATTGCGTGGATCGGGACTGTGGGGGAGATGGTCACNTTCNCCCACCCCCA
CTGCTGATAGATCCTTCCTGGGAAGCAATTTGGCAATATGTATCAAAAGC
CTTAAAAATGCGCATATCCTTTGACCCAGCAATTCCACTTCTAGGAATTT
ATCCTAAGGAAACAGAGATGTGTACAAAGATNTATGTACAAGGATATTCA
CTACAGCGTTGTCATACAGTGAAAAAGCGGAAACAACCTAAATGTCCGAA
AGTGAGNTGGTTATATATCGTAATGGAATACTAGTGCAGCCATTAAAAAT
AATGTTGTNGAAGAATATTTAATGACATGGAAAGATGTTCACGATATAGT
GTTAAGTGAAAAAAGCAGGTTACAAAACA
>rnd-5_family-3956#DNA/TcMar-Tigger ( Recon Family Size = 52, Final Multiple Alignment Size = 49 )
ACAGTCATGCATTTCGGTCAACGNCGGACTGCACATACATNANGGTGGTC
CCGTAAGATTATAATGGAGCTGAAAAATTCCTATCGCCTAGTGACGTCGT
AGCCGTCGTAACGTCGTAGT
>rnd-5_family-837#LINE/L1 ( Recon Family Size = 50, Final Multiple Alignment Size = 48 )
TAAAAGAGATTATCGAGGAGTGACGTCAGCAAAATGGCAGANTAGGAAGC
TCCAAGCCCTCGTTCCCCCACAGAAACATCAAAAACAAGCAGAAACTGTC
GGAACCAACTTTGTCAGAAGAACTCTGGAAAACAGTCAAAGGTTTACAGC
AACCAAGCAAATGCCCAATCAAGAAAAAAAAGGCAACTTTCAAAATGGTA
GGAAANTTTGTGGCGTTTTTACTCGCCCTTGCCCCACCCCCTCCCCGGCA
CGACAGCGGTCTTGAGCAGCCCGCGTTCCCAGTGTGGGACCCTGGTCCCT
GGTTCTGGAGGGAGCAGAGCAGACCTTACTTATTGTGTATGTCTGTTCTA
ACCTGTCTGGGGGCTACCTGAAGGACTGACGCAAGGCGCTTATCTCTGTT
TCGCCTAACTCGGAACATAGGCCGGAAAAGCGGCAGGCATTGCTCGAAAA
CACTGCAAGGCGAACTAGCAAACCCGCAGACGCCTGGGGCAAAAGATTAC
GGNTGAGGCATACAATAGANCACCTAAAGCCCGGGAGGAAAAGNCTAGGA
GAGANTCTTTGGGAAATTAAGACATTCAAA
>rnd-5_family-303#DNA/hAT-Tip100 ( Recon Family Size = 58, Final Multiple Alignment Size = 48 )
CTGTTGGATCCCCATATCAAATTGTCTTGGTGCCCATGTTATGGATCCNA
ATCCGGCAGAGGTGGATTTACCGTGAAGCTAATGAAGCTTAAGCTTCAGG
GCCCCTCACTTGCACGGGCCCCTTCCAAGGCCCTGAGAGCGCCCTAGCAA
TGCGTTCACATGGTCGCATATATGNTTTTGTAAAATTTGCAAAAGTAAAA
TATTCGTATTCTTTTTCTTAAAAGAGGGCCCTCCACCCAAATTGTATAAG
CTTCAGGCCCCACAAAACCTGGA
>rnd-5_family-1156#LINE/L1 ( Recon Family Size = 53, Final Multiple Alignment Size = 47 )
ATCACTGGCCANGAAAGGTACACTTAAANAGATTTAANATGGTAAATTTT
ACTCACTTAGACAAGATAAAACNACCACTGAAAATCAGCTAAGAAAACAT
AAATACAAGATTAGACATACACACATATATAATCTGACTGTGACAGACAT
ATGGCTGATTTATCTCTTAATTAAACCTCACATTGACTTAAAGTATACAA
ACAGAATTGCAAATTGTCTAAAATTGTAAAACCAAAAAACACAATAAACT
GATGTTAAGAAACCTACACTAAAAAAACACGCTAATATGAAACTGCAAAA
CAATTGATAAAGAATGTTCACTCATAAAATCTGGTATGCAACATTGATGT
ACCATTAAAGAAGAATTTGTCTAGATAACTACAATATTTGACTGTAACTG
TGTACTCATGGAAGGCAGGTATTTTGAATCATTGGCATGCACTGTATGGC
AGTAAAATTTCAGAGAAAATGCAGTATAATCATAAACAGAATATTCTAAT
GAGAAACTTTTAATAAATAAGCATTTAAATGAGATAATTTTTATGTTTTA
AATATATGCTATTCTTACACAAAATGAAACTGCTGTAATCCAACTTTAGA
AGCAAAGAATAGCCTTACATTGCTAAATAAAGATTAAATATATANATTTT
GCAGAATATNGTTAGAGCCTCTGATATATAAAACAAATATTTGGNAATAA
ATTATGTTATCATTTAGATATAGGCTGACGAAAGTGGGTGAAAATCCTAT
AATCTTTTTTTACCTGCAGCAAACTTAAATTTATGTAACTGTTTTAGTAA
ATATGGAGTGCCTACTAATTATCTAATTTACTTCAGGCATAACATGTAAA
TTCTAGCATATTGTCCTAAATGTCTGAATCTAAAATTACAGACAAANTTG
AAATAGAAAATAGAAAGTAAAAATGTACAGNGAGAGTGACATCACTAAGA
TGGGAAAATAAAAGGTGCCCTATTTGCTTATTTTCCGCACAGCAAGAAAA
TTCGTCAGCCATCCCTGACAAAAATGCCTTTATGAGAGAGCCAGGCATCA
TGGCTCAAACCTGTAATGACAGCTACACGGTACATTGAGGTCGGAGAACT
GCTTCAGGCCAGGATTTCAAGACCAGCCTGGGTTATGTAGCAAGACCCCA
TCTCCAAAATAAGTGCCTTTAAGAGAGCTTTGAGATCCAGGGAGGGAGTT
GTGAAACTCTGCTAAAGCCCAAGATTGAGGAGCGTTCCTTTTCAGAGGGC
AGGCCCTCATTCAGGTGGCAAACTACAGGACCCCTGNTCTTGGCTACAGA
CCAGGAAATGGCCCACCCAACTTGGTCCCACTGAGAATTCTGAAGTTACT
CTGNAATCATCCCAAACTCCTCCCAGCTACAGTCTGGGAGAGGTCCTGCC
CTTCCAGAGGCCTGGAGGAAGACACCCATTTATAGCCATGCNGGCAGGCC
TGCAGACCTTGGCCTTTACTGTGGTCCCTGAAGCAGTTCAATGACTCAGT
TCCAGCTCCCTGAGCCACAGTTCATGGCCAGTTCTGCCTACGTAGAAACC
CACAGTGACCTGGGGAAATCCTCTCTGGTACTCAGTGAAAGCCGTACTCA
TCCACATCCTGATATAAGGCCCATCATATGCAGACCCGACTGCAGAAACC
TGCCCTAGTGTCTGCCCTACAGANCAAAGTCCTGAAGAATATTCAGTCTG
TCCAAAAATAAAATGGGAATTACAACTACCCAAGCCCCTTGTAACAAGCC
AACTAAAGGTGGACCCTAGTGCAGACCCAGCAGCCTTGTGACCAAGCTAC
AACCCCTCTCCACTACAAACCCAGAGGGCATCCCATCACCCTGGGGCCCA
ACAAAAGATCTTTACCTTCTGAAACCAGTTTATAAAAACTTGAAGAGGTG
TTTGCTCCTTCAAATTCACAGACACCAATGCAAAACTATATTGTGCCCAT
TGTCAATGCTTCTATTTTAACGTAGCACTGGAAGTATGTGGCGGAAGAAT
TAGTCAAAAAATATTTAAAGCCATTGAAATTGAAGACAAATAAGTAAAAA
GTTGCTGTTTGTAGATCATNTGATCTTATATAAAAATAAACAGTACATTA
AAACCTGTTTAAANTAATAAATACACTCAGTAAATTAGCAAAATANAAAT
TAACATAGTACGAGTTANGGTTCCATACACTTAAAAACTATCTGATAAAA
GAGAAAGAAAGCAATCTTATTTACAATAGCATTAAAATAATAAATTTCTG
AGAACAAATTTAACCAAGGAGGTAAAAAATCTTTACAATGAAAGATATAN
AAAAAGAAAATTAGAAAAGAAATAAATTTAAAANTATTTCATGTCTATNG
ATTGAAAGANTATTGTTAAAGTGCCATATTAT
>rnd-5_family-540#LINE/L1 ( Recon Family Size = 52, Final Multiple Alignment Size = 47 )
AAAAGATTAATGGCAAACNGGTNANNACATTTGCNACCCATCACCAAGTT
AAAATAAGCTGNCCTANCAACATATNAAGAGCTCCTANNAATCAATAAGA
AAGNGACTGATGAAACGATAGAAAAAGGGCNGANAAAATGAATTCANAGT
TCACAGNAAANCAAGCATGTAAGGCTCTNGAACNTGAGAACAGNTGCTCA
AGCCTGAAGTCNTAATTAGGGCAAGCACGGGGTANAGCTACACTAAATTG
TTATTGTACCCGTNAGATTGGCAAAAATCANAAAGTTCGTNACACCTGTT
GACTNGNAAGGGTGCGGAAACAGAAACTCACGCGTTACTGAGTGGAAGTG
TAAATTGGTACAACCTCAGTGGAGGACAATTTAGCAATATCTATCAAAAT
CACAAATANACATAGCCAACCAGGATCGGATTTACCGTGAAGCTAACGAA
GCTTAAGCTTCAGGGCCCCTCACTTGCACGGGCCTCTTCCAAGGCCCTGG
GAGGGGCCCTAACAATNTGTTCACATGGTCATGTGTTTTTGTAAAATTTG
CAAATAGTAAGATATTTTAACCGCAATTGGTTAAGACCGCTGTCTCTTTC
CACTCCGACTTCCCCTCCGTCACACTTTCCTTCGTGAAGGTGGCATTGGA
GTGGCGTCACGGGCATTTTGGGATCCAGCTAAGGGGAAGTTGAGTTGGGG
ATACATTTAATTTGGGTTTAGTGGGATATATTTACGTGNTTCGCAGTCAC
TTTCGGNGTANAGTTAAGTTATCGCTAGCTGTCCCGGTGTAGGAATGGCT
TCCAGGAATACTCCTACCGCCCACCGTGCCGACCACCTGGCACTTAACTA
GAAGGTGCAGGGCCAGAGGTTGTATCGCGATATGAACGTGTCCTACAGTG
CCCGGCACCAGAAGTGTGNGGGTAGTGGAGAAGAAACAAGGTTTGAAATA
TACGGAGCCAGAAGCTAGTCTGTGGAAAATTACTTCCAATCATCAGACAT
GTAAAATAGCAAGCAGAATGGTCAAAACGGAAGTTCTCTCCTGTCAGGAA
TGTANTCGATAATGCAGCGANGNNATAAACGTACCATACATTTTGTTCTC
TTTTGGATGGGAATCGCGCGAAATAGAATTTATCAGAATTCCTGCGTTTG
TAGGGCACAAACCTACGGCAGTACTACAAACAGCAAGTACGTCTGTGTGA
AGTCGNATGCTTTATGCATCGCAACTATCAATAATAAAAAANAAATTTCG
ATCAACCATGCTAAAGAAAAGACTGAATTTTCTTTCTATTCTCTGTTAGA
AAATGTATATTACAAAACCATTGTCATATGAAGAGGTAATCAAAGTCAGT
ATGCAGCCAAAAGATGTAGGAAAAAGTATTGTAGAGGTGTGTCAGGCAGT
TAATTAATAAAAATATTGTGTTATTTTTCTGGATTCTGTGATATTTGCGG
TATTTGTCAGCTTTTTAAAATTGTAATTTATTGCGATTTCTTTTTATTGT
TTACGANNATATTCANTTTCGTACCTAGCTTTGTGATTTCCNANATTTTG
TATTCCTTTCGT
>rnd-5_family-350#LTR/ERVL-MaLR ( Recon Family Size = 62, Final Multiple Alignment Size = 47 )
ACAGTTTCAACACTGTGGCTGNCACTGTTGGTTNCCTGCACCCAGTGGNC
ATTCCCNTTTCTNGNNTGCTGCCAGATTCCCCTCACGTGATATTTTCAGG
TGTCAGGCGTACATGGGCTTCAGGAAGTACCGGCCTCTTCCTTTGTCCTT
CCTTGGTTTGGAAATGGGCATGTGACCCAATTCTGGCCAATGAGANNCGN
AAGGGGAAGTCTGCTGGAAGGCTTCTGGGAAAGNTTTCCTCGCTCTTAAA
AAGAGNNACATAGGGAAGGAGGTTTCTCTGCTTCCCTCGGACATNGGTAG
TGAGAGTGCGATGCCTGGAACTGCTGCNGCCATCTTGCGACCATGAGGAG
AA
>rnd-5_family-3646#LINE/L2 ( Recon Family Size = 53, Final Multiple Alignment Size = 46 )
GCTCTGCACGTTCCCTATTCTGTCCCCNTCTCCCACCCTCTNCCCAACTC
CTGAAACCCTTCCACTGTGCCCTCTGGAATTCACAGTCCGTCATCAGCAA
AATCCCCTATATCCTCAGCCTCTTCTCTGAACGTTCCCTTCACCTTCTTG
CATTCCCTGAAGGACACTGCTTCCCCTGCAGCCCTCTCAAGTGGTGGCTG
CTTTTCTTCCACAGCCCTCATACCNCTGGGCCTGGAGGTGAGNTAGGTGT
CNTCCTTGCTCCTCATTGCCGCTTCCAGAAACCCTTCCTCCCTCCTCCCT
AAAAACTCCTGCTTTGAATCTCATGTCATCAGACTACCGTCCACTCCTAC
TCTTTGCNGTCATCTGCTAGACCCGGTCANNCCGTCTCATTTCTTGAAGA
TTTTAGCTCCTGGTTCACTGTCACTCTCTCCAACACTACTCCTGTCTTAA
TTCTTGGTGATTTCATATCCACATAGAAGACCAATTCCTTGAGCTCTTCT
CCTCTTCCGATCTCTTGTTCACTTCACCTCAGCCACTCATTCCATGGTCA
TACCCTAGACCTTGTCATTACCAATAACTGCAATNNTCTTATCAATTCAA
GCTTTCAACNTTCTGTGACACTG
>rnd-5_family-486#LTR/ERVL ( Recon Family Size = 53, Final Multiple Alignment Size = 46 )
TCCCTCTCTTATCCCTTATTATGTAACATAAGATGTATTGACNTTATATC
ATAGTATTTGTTAACTTTACATCATAGTATTTAAGTTACAGGATATCAAG
GAGAAGAGTAAACATCACCCAAGGACTTTGCNTCCTCTTCTGGGGAAGGG
GTTAGTGCGTTTTCGGTTGTA
>rnd-5_family-529#DNA/hAT-Charlie ( Recon Family Size = 46, Final Multiple Alignment Size = 46 )
TTACTTGATTCAGTTATTGGAAAACTTTTAAGTATGTTTGGAACAACTTG
GGTATGTGAATCTACTTTTTCAACTGTAAATTTTATGAAATCTAAATACA
GATCAAGTATTTCCGATGAAAA
>rnd-5_family-523#LINE/R2 ( Recon Family Size = 70, Final Multiple Alignment Size = 45 )
TACATTCGTAGGGTTTCTCTCCCGTATGAATNTTCTGAGCGNTACGAANT
AGTTTGGATAGGCTTTCCCACATTCACTACATTCATAGGGCTTCTCTCCA
GTATGAATTCTCTGATGACTNTGAAGAGCATTNGAGTTGAAGAACCTTTC
ACACTTTACATTCGTAGGGTTTCTCTCCAGTGTGAATTCTCCTGATGTGG
TATTGTAAGGATGTGCGCCGGNTGAAGGCTTTCCCACACTCATTACATTC
ATAGGGTTTCTCTCCAGTGTGAATTCTGATGTNTAATGAGAGCCTGTACG
AAAACTGAAGGCTTTCCCACATTCACTACATTCGTAGGGTTTCTCTCCAG
TGTGAATTCTCTGATGCATGTGAATAGAGCTGGAATTACTGAAGGCTTTC
CCACATTCNTTACATTCGTAGGGTTTCTCTCCNGTATGAATTCTCTTATG
CGTTNGNAAATCTNGAAGTGAAAGAACTTTCCCACATTCATCACATTCAT
AGGGTTTCTCTCCAGTGTGAATCCTTTC
>rnd-5_family-1307#LTR ( Recon Family Size = 45, Final Multiple Alignment Size = 45 )
TCGGTAGAGAGCTCCGCCATCTTTCCCCCAGGTCTCATGCCCCCGCCCTC
CCCTCAGGCTTCCTGCTCCCCGTTGCCTTGAGAAAAGCCCGCCAAACCAG
TTCTGTTCTGCCCAGCAACGACAAGTAGCCAATCGTCGCAACAGAAAAGC
CCGCCAAGCCTCGGCCTATCCTGAACCGACACCTAACCCTCTGAGCTACC
TCAGCAGTCCGCCCAGAGACGGACAGCCTATCCTAAGCTCCCACGACACT
CCGCCAGCCCTGTGTCCACGCCCCGTCCACCCCCCTATAAAACCCTCCTA
CCCCAGCCACGCGGTCGCAGCCAGCCCCGATCCTCTTCCTTTCCTGGCCT
GCCCGCTGGTCCCAATAAACCTGAACTCGGCTTCCAACTCTCGCTCGAGC
TGTTACTTGGGATCGGGTACCGGGCAGGGGTCTACCAGGGGGTCGC
>rnd-5_family-2943#DNA/hAT-Charlie ( Recon Family Size = 50, Final Multiple Alignment Size = 44 )
CCTTTCGGTAAGAACAGTTGCTCGAAGAGTTGAGGATATTGGNAACATCA
ATAATGTCATTAAAAACAAGGCAANTGATTTTAAGTGNTTTCCCCTCTCT
TGATGAGTCGACAGACGTTACCGATACTGCTCAGCTGTTGTTTATTCAAG
GAATCAATGCCGAGTTTGAAGTGACTGAAGAATTAGCCTCTATGAATAGT
CTGCGTGGAACAACTACAGGTGAGATAATATTTTCAAAGAAGTTGAGAAA
ACACTAATTCAGTACAACCTGAAGTGGAATCTGCTAGATAATGGTAAAAT
GTGTGGAGCAGAAAAAGGCTTATTAGTTGGACAAATTTACAAAACTTGTG
AAAATGTAAGGTGGTTATTATNTTATGTCATCAGCAGGTACTTTGCGGAA
AATATTTGAATCTATCATGTGTTATTGAACCAGTAGTGTCAACGGTGAAC
TTCATTCGCTCTCGTGGACTTAACCATTGTCAGAAATAGAAGCTGAATAT
CCTGACTTGCCCTACCACACAGCAGTTTNATGGCTTAGCAGTGGTGAAGT
TTTATTGTGNTTTTTTGCTTTTAGNTCAGAGCTGAGATTNAAATTTTTCT
GAAAACGAGAAGAACTGCCTTCAACCACTATTATCGAACACTAAATGGCT
TTGGAAATTAGCTTTTGCTGCAGACTTCATAATGTCTCAATGAATTCAAC
CTAAAATTACAAGGCAAAACAGCGCTTATATGCGAAACTTATACTGTAAT
AAAGTCATTTCGACAACTAACGTTTGAATCACAAGTAATGTCAAGCTGCT
TTATATACTTCCCGTGCTGTCAAAAGTTAAAACAAGAAGCGAGATCTCCA
TTCCCACACAAATTTGCAGCGGATATATTTTCTGAGCTCAAACTACAGTT
CCAGCAGCGTTTTTCGGACCTTAATGCAAGTGCAAAGGAAATTTCCATAT
TTCAAAATCCATTTAACTGTGCAATTGAGGAGCTTCCACCTAACCTTCAA
TTGGAAGTGATTAATCTGCAATGCAATGACATGCTAAAAGGCAAANTATN
AAGAGAAGAATCTAAAAATTCTATAAATGCCTTCAAGCGATGAATATGCT
CAATTAAAAATCATATGCTTATGGACTGATATCAGTATTTGGCATGTCTG
TGTGAAAAGATTTTCAAAGATNAAATACGTAAAATCTCATTACAGATCAG
CATTAACAGATGAACATTTGCAACTAATCGATTTGATGATAGGGAACACT
AACTTTGAACCCCAATTAAGCGAAATGTTATCCCCCCAAAAAGAATTCCA
TTCTTCTCATTAGTAGACCTGTATTACAAAAAATTATATTTACTATTTTG
AATTTCGTCAATAAAAAATTTGTGGAAATTTGTTTTCTCTCTTGTTATAT
AAGTACCTACATAATATCCTCGATTTTGCCTCTTGGCCTACAAAGCCTAA
AATATTTACTATCTGACCCTTTATAGA
>rnd-5_family-2679#DNA/TcMar-Tigger ( Recon Family Size = 44, Final Multiple Alignment Size = 44 )
CTAGTACTCTGTATGTTCCTGTGAATATCCATTAACATGCACAGACAAGA
GTCCCGGATGAAACAAGATTCATCCAAGAAGCACACACGTTTGTCTTCCT
TTGGAGACAAGTTGTTTCAACTATTGGCCTGACAGCAGTCACAGCACAGC
CAGCCTTGAACCACCAGCACGGAGACACAGGGTAACCGTCTTGTTCAGGA
ATTCAGCAAGGTCCTGACCTGCCCACAGAATNTCAGCAGCCAGCTATGAA
AAATGACCTGAGCAGGCACATCTGCCTCCCCTTGTTCACACTTAACTTTT
GTTATTTAGGAGTATGTTTCAACTCCACATGTGACCTGAAAAAAATGCTG
TGTAGCAGGAGACTGCTCTGTAACGTTTCCATTTACTACAACTGGTGTGA
GTTAATTTGCCAAGTTCATCAGGTAGATGTGGCGATTGCATTTCCAGAAG
CTAACAGAGGGGTTGCGAAATTATGGTCTGTGGGTAAAATATGTTCCACG
CCTGTTTTGGGAAGGCTCACGAACGAAAAATGATTTGACCATTATTAAAT
GATTAAAAAATTCAAAAGAAAAATAACATTTCTTGATATGTGAAAATTGT
ATGAAATCAAAATGTAGTATATATAAATAAAGATTTACTGGCACAGAGCC
CCACTCATTTGTTAATACATTGCTACAACAGCAGAGTTAGGTAATTGCTA
CAGAGACCATGTGAGCCACAAAGTCTAGAATTTTTACCATCTATTCTTTT
GCAGAAAACATTTGCTGGCCCCTGAGTTATAGCACATTACCGTGCAGAGG
CTACAAGTCCACTTACCTCCCAGTGTGAGACAACACAAAACTCCCTTTCA
TTCTGGCCTGACCCTCCTTCTTAGCCTCTTACAAACTTAATGCCTCATTT
CTGCCTGCTTTCTAAATGTATCTGTAACTGTCTTCACGCCATCTCCCTGT
TCAAAAGCCTTCTAAATACAGTTGGCCCTCCATATCTATGTGTTCTGCAC
TGTGGATTTAACCAACTGTGAATAGAAAATGTTAAAAAATATTGCTCATA
TACACAACATGTATAGTTTTCTTGTCATTATTTCCTAAACAATACAGTAC
GACAACTATTTGCATAGCATTTACACTGTATTAGGTATGATAAGCAATAT
AGACATGATTTAAAGTACATGGGGGGATATGGGTAGGTTACATGCAGATA
CTGTGCCGCTGACATCAGAGACTTGAGCATTCATGGATTTTGGCATTCAG
GGGAGGCCTTGGAATCAATCCCTCACAGATACTGAGGGATGACCATATTT
TTATAATCAGGGGAAAAATGTATTTTTAATATACCAATGTTTCTCTGTCA
TTCACAGAACAAAGCCACAGTAGTTGTGATAAGTATACCAGGGCATTCAC
ACCTGGCCCCTGCCTGCCTGTCACTTGTGGAGCAAGCCTCCTGAAGCTCA
GCTCACCATACTGTGCCATGCCCTTCATCTTCACCTACAGCTTACGAGCC
CCTCCGCTTTCCTACGACCTCAATCAGAAGATCATGTTTTGTTCACCAGT
TTTTCCCCCAGAGCACATACTTTTTAATAAACTTCTACAGTGAGATATGA
TGCCAACTTGAAACTATTCACCTGCATGTCTAGCCTGACCCACCGTCTCC
ACCCACGAATGAGTTACACCATGTTGGAAACTACATTTTCTTCATCTTCA
TGACTCCAGTACTTGGCATCAGGAAAAACATAAGATGGGTTCATAGAGTT
TAATAATCATAATAGATTTGATTAGTTTGATTGTCATTTTCATCTTAGTG
GTTTAAAGCACAGTTTTCAAAATAAAAAATAGCCATAGACATAATATGTG
CCTTTACAGATTCATCCTGAGTGGCTCTGAGTCTTTGATAAGCCACGTAA
CTTCTCTAAGATGCANATTTCTGATGTGTTAAAAGATAAGGAGGAGTCCT
ACTTGACTGACTTTAACCACTTCATGGGTGAGCGTGGTAAGTAATCCTAA
ATATGACAATCAGCATGAATTTTCTAAGACCATACATTCACATTTCTAAA
AAATACTAGTTTAAAAAGTACTTCCATAAGCAAGGTATTTTACACTGGCA
AAAAATAAATGAGGTCTAAATTACACAATGTCAGTAAAAGCTCTTTATAA
GTTGTAAAGCATACTTGTGAAATAATATGGCTTTTAGTTTCTATTATAAT
AACCACCTGTCATAGCTGAAAAGATCACAGCTAGTCTGGCAGATAGAAGA
GGCTGCTTTCAGGGCTCATAATGCATTGGAGAGTAAAAGGTAATTTTATT
TTCATGATAATGATACTGCCTTCCCGCTCCCTCTACTTCAGCTTATTTAT
GAGGAAATAAAACATCTTACAAGCGCATGGACACTTAGATTTTTAAAAGA
CTTCCGCATCCATTATCTCTTTTAATCCTCCGGACCATCCCCACTTTGCA
GATTGGAAATCTATTCTTCAGAACTGGGAGTGACTTGCCTTAGACCTTCT
AGCAAGTGAGAGAGAGTTGGACTTCAAACTGAGGTCCTCAGGTGACAAGT
TTTCTACCTTTCCATCAGACCAAAAGCCCATAGCATTAGAGTAGTTGAAA
TCATTCTAATGTCTTTAGAGGTTAAGAAGCTGAGACCAAGAGATTNCAAA
TGATCTAAGATCACACAATTAAGGAGAGTTTTAGAAACCCAGAATGCCCC
CCTTGCCTCTAGATNATTATATATTATCTTTTGTAATAT
>rnd-5_family-2832#LTR/ERVL-MaLR ( Recon Family Size = 51, Final Multiple Alignment Size = 44 )
TTGGATTAGTTCTCGCGGGAATGGATTAGTTCCCGCGAGAGCGGGTTGTT
ATAAAGCCAGGACGCCCCTCAGGTTTTNCTCTTCGCACGTGTCCGCTTCC
CCTTTGACCTTCTCCACCATGTTATGATGCAGCACAAGAAGGCCCTCACC
AGAAGCCGGCGCCATGCCCTTGAACTTCTCAGCCTGC
>rnd-5_family-589#LTR/ERV1 ( Recon Family Size = 87, Final Multiple Alignment Size = 44 )
TGAGGGACTGTGTTAGAGGAACTTCCCGGGTCNGCTAGGGGCGTNGTTTC
AAGTGCAGGAATTTTCCCGCCTCTGGCCGGCTAGGGCTTTGTTTCCAGTT
TTCCCGCCTCTGGCCGGNTAGGGGCTTTGTTTCTANTTTTCCCGCCTCTG
GCNCCAGGTAGGGCCTTTGTCCAAGGGCAGGGACTTTTCCCGCCTCTGGC

>rnd-5_family-202#LTR/ERV1 ( Recon Family Size = 48, Final Multiple Alignment Size = 43 )
GTGCTCAGAAAACGATACCCAAGTATGGTGCTTTGGCATGCTGAGTGCTT
TGAATTAAAGAAATTGGAAGGCCTCAGAAGCTGCCTCAGAATCAAGGTCC
TTCTAACCTTTTTCTTGTTTCCCTCCCCCCAAGTACAGGGAGGGACTCTC
TCTGGAATTTCCTTATCTGACCGAGAAAGCTTCTTTCCAAAAGAAATGCA
ATTGTCTTAAGACTCCCTCCCTAGGAATCTCATCAAATAACCAGGAAAGA
TTAACCACCGGAGAAGAGAAGAGACTGGAAGTCATCACCACGCCCAGACA
GACTTTTCATCTATTCTTCTGAGGGCAGCTCCGAGAGATTACCTGGGGGA
CTTTATCTGCATAATAAGACAACCTTTGTTCACAGTGNAGTTCCGCCCCT
CACCTTC
>rnd-5_family-1428#LTR/ERV1 ( Recon Family Size = 45, Final Multiple Alignment Size = 42 )
AAAGAGAAAAATAGCTCAGAGCAGTCTGAGCTATGTGAGGTATGCAAAAT
TTATCAGGCCCAGAGAGACATGAGTATGGGACTTCAGTCACATGCCCCTC
CCCCCATGCCCGGGGGCAATTGTTTAAAGGCATTTTGTTCCTGACTAGCT
GCCTCACCCATTATCTTCATGTTCCTGGAATTTC
>rnd-5_family-745#LTR/ERV1 ( Recon Family Size = 47, Final Multiple Alignment Size = 42 )
TGCCCCACCGGANGCACAATGGAGCGTCAAACACTCAGCTCCAGCCGACT
CACTAAAGCTAAGACTTTCGCGCTCTTCGCGGTCACCATCCTCGTCNCCC
TGATTCCTGCTGTAACCCCCTANAGNGAACCCCCCTTGACGCCCACCTAT
TACCGGTGGGTCCTCACCGAGGGCTCCACTGGAGGATATGTTAGTTCCNT
AACTGGGAAGGGATCCACCCTTGTCAACTTAACCCTGGAGTACATTCCNA
GAGACCCCATAACCTTCTCCCTAGACCTCTGCGCCCTCTTGGGCGAGAGC
CCAGACGTAAATACTACAGGACAAGTGGAGGTGTAGCTGGGTGTGGCAGT
GCAGNGGCCGAGNAACGGCTTCAGACNATGGGGCTATATCTGTGCCCAGG
GTCCACCCCACANAAGAGGTGGAACTGTGGAGACTTAAATGAATTCTTTT
GCCCCCATTGGGGCTGTGAAACTATCTCCACTATATCAGGATATACCGAA
AACGGAGACTCCTTCATCTCTTTCAACCGAGACTCTCCCCCATCCCCATG
CTACACCGGGTCTTGTAACCCACTCAAAATAACTGTAACTACCCCAGATG
GTAGATGGACAACGGGGCGAACCTGGGGTCTCAGAGTATATATGAGTGGG
TGGGACATGGGAAACATCTTTACCATCCAGCGTATAACCCCGCCCAGACC
CAACCGCCCTATAGGACCCATTGCCCAGGTCATACAACAACAGGCGGCCC
CCTTAAAAATACAAAGCCCCCTCATCCAGATAATCAATACCCCCCTCAAC
AACCTTCCCCTACAACCCCAACTCGGCTCGAAGAGGACACAACCCTGTTA
ACNTTGTTGTCCTCGGCTCACCACCTCCTCAACAAATCTAACCCAGATTT
AGGAAAAGACTGTTGGCTCTGTCTAAACCCTCAACCGCCGTTTTACACCG
GGTTGGCTTCCCAGTTACCTGCCAACCCGTCCAACNCTTCATGCTCCCGA
NNCACACTCCACTTAACCCTGGGAGACGTAGAAGGGTATGGGCANATGCT
NCCACTCCCCAAATTACACCCTCGCAGGTTCCCCCTACGGGCACTNCTGC
AACGTCTCCCACAATGTAACATTTAATGGTAAAAACCTTTACTATCGGGC
CCCAGACNCCGCTTGGTTAGCCTGCACTTTTGGCCTCACCAACTGCATTT
CCACNTACCAGTTCAGCAGCTCCTCAATCCCATACTCTGCACCCCNGTAC
ACATCCTCCCCAGAGTCGACGTTTATGGTGGCCAACAGGGACTTAACCTC
CTGGCCCCATCAGATACATTACTGCCCGNTGGAAACGGGCCCCCATAATC
ATACCCCTACTGGTGGGACTTGGAATNGCNGGNTCCACCGCTGTNGGAAT
ATCNGCCCTAGTCACTGGGGACCAAAATTTTAAAACTCTCTCNCACCANA
TAGATGCAGATATAANCCACCTGGAAAACTCCATCNCCAAACTCGCTGAN
CAGGTNGACTCCTTGGCTGAAATGGTACTNCAAAATAGGAGAGGGTTAGA
CCTGTTATTCTTAAAGNAAGGAGGGCTGTGCGCCGCCCTCGGTGAGCAAT
GTTGCTTCTATGCAAATAANTCNGGNCTCATCCGAGACAGCCTCGCGATG
GTTAGGCAGAACTTAGAAACAAGAAAACACCTCAGAGAGGCCTCAGAAAA
TTGGTACCAAAAACTGTTCTCCTGGTCCCCCTGGCTGACATCCCTGCTCA
CTGGATTAGCGGGACCCCTGGTCCTANTGGTNCTGGGGCTAACGTTCGGA
CCATGCCTTTTAAACATGCTCCTCAAATTTATCCAGGAAAGAATAGATTC
GGTAAAATTAATGGTTCTAAGATCCAACTATGGGCCCCTANGNCAAACAA
ACAATACTAACCTATTAGGAGGAATCAATGATTTAATNCATGTAAATAAA
ACAAGGGGGGAA
>rnd-5_family-2219#LTR/ERV1 ( Recon Family Size = 45, Final Multiple Alignment Size = 42 )
ACAGAGCAGGAGCATCGCCATCTTGGACAAGCACCGCCATTTTAAAGTTC
ACCTTGATCAAAAACCGCCTAAATCCAACCCAAAGGGCATCAGCCTAATG
GCTAAGGTCAGCATGACCATAAACCACAAATGACATCTCCGACCAGAAAC
ATTCCAACCCTAAGATAAACCCCTCCCCGACCAGAGACATGCCAGCCCCG
AGATAACCTCCCCTCCGGCCAGAGANATGCCAGCCCCAAGATAACCTCCC
CTCCGACCAGAGACATTCCAACCCCGCGATAAACTTCTCCACACAGAAAC
ATTCCAAGCCTGTGATAAGCTCTCTCACCCTAAAACCCNTAAATACTCTT
AGTCTGTAAGAGAGAGTGCTCCTGACCGAAATCGGCCAGAAGCCCCTCTC
AGGTTTATTCTCCAAAATAAACCTGTCTTTGACTGTTGAGCCGCTTTTCG
TGTTTCTTTCCTCTTTCTTTAACTCT
>rnd-5_family-4870#LINE/L1 ( Recon Family Size = 45, Final Multiple Alignment Size = 42 )
GGGACAGGACAAAGNCTAGGACNTGCCCAAGGTGGGGAGTCTAATAGGAG
ACCCCCCCGCATNAAGCTGGGANCCCAAAGGGCTATACTCTAGTGGAAGG
GTGAACNAGAAATAAACTNACCCCAACAGCAGAAGAGCAAGGAAANTTGC
CCGTCTCCATTGGCACTGATGGAGGGGAAAAAAAATCTCTTCCTGAGAAT
TTATAACCACAACAGGCTCTTCACAGGTTTGCAGTCCGAATTCATACCAC
CTGNGTGGTCCGAAAAATCTCAAGCCGAGAATTTAGTTTAAAGTGGTCCC
GGGCTGGTAGTGCCCCCAGGCACCTGGCAGAAGCAAACGCAAATCCTCTC
TGGAGGAATNCACCTTCAACCCAGGCCTCAAAGAATTCCCANAGATAAAG
TTCCAAGGAANATGAGCAACTCACTCAAAAACGAAAGCACACAGAAACAA
GGCACCATGAGCAAAACGCAGAAACCACGGNANCGGACATATCAGATATT
GTCATATCAGAGAATATAAAACTTTANATGTTTAANGAAATAAACGNAGG
AGCAAAACACAAAATATGTNATTTTTAAAATGCATGGAANATTTNAAGAA
GNAATTAAAAATATGAGTAAGAATCAAGAGATATAAAAATGAAAATNTAA
CTAGAAAGCATCTGGAAAGGAGTTAAATAGGGCATATAAAGTAGTAACAC
TGTGTGGCCTCGAAAGTGGGTTTAAAATAAATCAGTGAAGAACTGTAACC
CAGAAGCTAGACAAGCTGGACAGAAAATTATAAAACGAGGAGACAGAGAT
TAAGAGCAAGNAGANAGTGAGGAAGGNCAACATANNTTGTCAGATTCTAG
AAGGAAGGAAAAAANAGAATGAAGGAGAGGCAATATTTGAAAANATAATG
GCTGCANANTTTCCCAGAACTGATGAAAGACATCGATCCACAGATTCAAG
AAGCTCAACAAACTNCAAGNAGAATAAATACAAAAAAANCCACACCTAGG
CATACTANAGTGAAACTACNGAACACCAAAGAAAGAGAAGTTTTAAAGNC
AGTAGAGAGTA
>rnd-5_family-10566#LTR/ERV1 ( Recon Family Size = 48, Final Multiple Alignment Size = 42 )
GTAACCACGAAGGGATTCTGAGTGGAGGTGCCCCTGACCTTTGACAAATC
TCCTATCGGTGCTTGGTACCAGCNTGAGCTANCTTTATGGCTCAAACCAA
TAGGACAATTTGCTGAGGTCCGGGAGCACCCTTCCCCTCCAGAGAATCCC
TGATCTCCCAAAATTTGGTCGAGATCTAAAGTTTATTTTGCTGTACAACT
CCTTTTCTGGAGTTTTACTCGCTTCCAACAAGGAAGGCAAGTTTTCCTGC
TTCCATGACGATGGAAGGCAGGCAACTCCTTTNTGGAGTTTNAGCTCGCT
TCCAACAGGGAAGGCGAGTTTGAGTTTTTTCCTGCTTCTAGGATGGTAGA
GAGCAGTCTTCGGCCTGAGNCCCATTCCTAGGTAAGTAGCTGAATTGGGG
TTTTGTCTTGGCTAAAGTTTAACAACCAGCTGGTCTTAATTTCTCCTTAC
CATTAGAGCACTCGGTAATCATATTTTTGGGTTATTGTTGCTGTTGTTGT
TGTTTCGGTCTTTCTCCCATCGGGTTTGACCAACTCTACCTGACTTGGTC
AAATCCGAATGAGAATTCCAAATTATGGGNAACAAGGCCTCTGAATTGGC
TAAAATTCCTCGCAGCTGCAAAAGAGAAAAGACAAAAACAAAGAAACATG
CGCTTGGTTTCTGTGTTTGCTTCCTGTTTTAAAAAAATTGTTCTTTCATT
TACTTTTCTTCCACCCTATNCCTCCTTCCCCCTTTGCCATCTNCGGTACC
AAAAAATNTAGAGAAGGCTTCTAATGACTCGAACCCCTTTAAAGAATTCA
GAACAAAGGTGCCACTCACCCCTTTTGGGGTGTTCTGTTTTCTTTGTGGA
GTTTCAAGAGTCATGGGCAGATTCTTCTTAGGTCTAAAGCTCTGCTTTCC
TNTATTGCATGACCTGACCTCTTTGGCTTTGGGGGTACCAGAGATGACCT
TGTACTGTGAGAGGATTTGACCTTTGCGTGTGTAATGGCGGACGAGAGCT
ACAAAGGTAGGGGTGGCTGAGCACAGTTTACAGGAAGTGGTNTTGGCTGG
TTTTTNTTTTTCTTCTCTCCTAGGAAGTTGTTGTTTAAGGATCCTAATTC
TAGTTCGGAGATGCATTCTAAAGGGTCTTCTCCATTGCTTTTTCTCCCAA
AATTAATCTCGATTCGGCTTGTCTGTGCACATTTGCGTGAGGAACTGAAC
TGTTGTTTTCATAGGTAAATGAGAGACTGAGTTTTCTCAGCTCCGAAGAG
AAAGGGCATTTGCTCCTCCCAGCCGAAAGGCGCCCCTGGGTGACCGGGGG
CCTCGTGGGAGTGTCTGGGGGGTTGACCCCCCACGACGTGCAGTGGCCCT
ACAGGGAAATCCCCAACAAAAATTAATTATTTTAAAAAGGCTCATCCAGG
AAACGCATATAGGGGCTGGTCACCCGGCGTTTTGAGCCCTCTGGAGAGAG
AAACTGAGACATGTAAGAGGGCGGAAACGACTCAGTGGTGACACACTGTG
GAGTCCTGCCCACAAGCAGCACACATCGATCCACCACACAAAAACCCTAG
GCCACAGCTCAGTTCCTCCTTTTAAGAAAAAAAGCGGGAAACAAATAATC
TAAGAATGAGGAGAAAACAAGGAGAATGACCCCCTTTCGAGCACTCCGTA
GGTTTTATGGCACCTCTACTTGCCAGAGTTTATGTAAAATGGAAGTAATA
TGGTCTTTGTGCACATTAAGGAAAAAGAGCCCTAAGGTCGACCTGCAAAC
TATAGAGTTCCTAAGTTCTCTTTTTCTCTATTTTTCTTTTCTGCCTGCTT
TAAATCTGCTGTTATTTTTCTACTGAGATAAAACCACTGTTTGGATCCAA
CAGGTTCTTTTTGCAAGCCGGTGAATTTGTATTTATCTCATGGCTAAAGT
TCTGAAGTAAAAGCTATAGGATCTTTGTGTGTGTGTGTACGTGTGTGTAT
ATAT
>rnd-5_family-5588#SINE/Alu ( Recon Family Size = 42, Final Multiple Alignment Size = 42 )
CAGTACCAGGGTACTCCCTGCTCTTGATGGTGCCACTTACACATACCACA
GGTTCTATTAGGAGCAGGGTCCCCTTTAAGCTCCTCACAGGAGGTACTGT
NTGCTATCGCCGTGTTTCCCCCAGTGTCCCCAGAACACAGCTTTGCCTAC
TGGGCCTCAGCAGAAACCGGAACCGAATGGAAGTTCAGTAGCCTCAGACA
TTTAGACCAACAGACTAGATGCTACTTCTCTGCAGGATCTTATACGGTAC
AGAGAGGATTCCTGTAAACATGGATTTAGNCTCTTGCTGAGAAAAACAGG
TGGTTCTGCGCCTGTGTCAGAAATCGATAGCTGGGATTGTGACCCCAGTC
CCACACCCACCTTACTGCAGACGTGGAAACGTTGCTAAACACTTTGGCTT
CTGTCTTCCATCTTTAACAAAATGTTAAAATACCCATTTCTATTTTCTAC
GAGTATGGGAAGGATGAAATTAATTTTGATGAAGAGAGCTGTTAGTTTCT
CAGAGACAAGACAGGACATCATTCATCACTTTCGTGGNGGTNAACCTATA
GAACTTACTGTATGTCTTCAGCCGGTAGTTCAGGGAGTAGGCCACCTNAC
TCANAAGACGTCTATTTTTGCTGACTCCGACATTCGGTTTGTTNTCTTCC
TGNTGGGAGCAGGATTTCTCAATGCCTTCTGGAACGTTCACCTCTGGGNT
TGTTCCGGAAGAAGGCCTGCCAGATGCCACCANGNTGACGTTTGGGGCAG
AACACAGAAAGCCAGGGACTGGGGAGAAGAAACCCAAACACATGATGGGT
TAGAAACTGGTGACGTCAAATTGGTTTAATCAGGACTGAGGGATGTCACT
GACAGCCTTGCCTATTGNTTTAANATGNTGTTTCCCCGNNTTACTCTTCT
CATCTCCACTCTCGATCTCCTTAAAGTCAACTTGTCTTAGCTACTCAGTC
ACCCTGAAGCCGGGACATAAACACTTCTGCCTTTATCTTGCTTATAAGTT
CTGAAGGATCCTATATGTTACGAGAGGATTCCTGNAAACACGATTTAGCC
TCTTGCTGAGAAAAGCAGGTGGTTCTGTGCCTGTGTCAGGAATCATTAGC
TGNGATACTAACCCTAGTCCCACACCCGCCTTACTGCAGATGTGGAAAAG
TTGCTAAATACCTTGGCCTCTGACTTCCATCTTTACCAAAATGTTAAAAT
ACCCATTGCTATTTTCCTAGAAGTATGGGAAGGATGAAATTAAACTTTGA
AGAAGAGAGTGTATCGTTTCTCAGAGACAAGACAGGACACTGTTCAGCAC
TTCCGTGATGGTGAACCTATAGAACTTACCTTCCGTCTTCAGCCGGCAGC
CCAGGTAGTAGGCCACTTGACTCATAAGAAGTTTATTTTTGCTGTCTCCG
TATTTCTGTTCTTCATCGTGATCTTTTCGATCTTCTGTAAACAAATTCAG
AAGAGCAGGTCACATTAAGCAAATCGCACTTCACACAAGACCAAATCAGT
GTCCAGTCATAGCACAAGGACGTAAAATATTCTCAGTGTAAGAATGTGNT
ATTCTGACAGGAATGTTCTAACGGGCCCTAGATTAAGTCGCCTCAGAAGC
GGATGAGCCTGCTTTTCAGATCCATGGGACAAAATCTCCCTCATCTGGTA
GATCTTAATCACGTATCCTCTGACCTAAGTCAGTGCAAACAATTAAAACT
TTTTCCCCAAAATCTTCAAAAATTGCCCTAACTACTTTCCAGAAGCGTTG
CTGCAATACCGATTTATCTCATCATATATCATGGTCAATGAATGGTTAGA
GAAATTTATANAGGAGACTGGACCGACGGATGAATCCTAACAACCTTTGC
TTAGNAAAGAATCCGTGGAGCCAGCNTGGTGNCTCACACCTGGAATCCNA
GCANCTTGGNAGGCCCGGGNANGCAGATCACCTGANCTCAGGAGTTCAAG
ACCAGCCTGGCCAACGTGGTGAAACNCTGCCTCTACATAACAACACAAAN
ATTAGCCANNTGTGGTGGTGCCCACCGGGGATCCCAGCNAATTGGAAGG
>rnd-5_family-227#LTR/ERVL-MaLR ( Recon Family Size = 48, Final Multiple Alignment Size = 41 )
AAGCCCTGCCGACACCTTGATTTTAGCCCAGTGAGACCCATTTCAGACTT
CTGACCTCCAGAACTGTAAGATAATACATTTGTCGTTGTTTTAAGCCACT
AAATTTGTGGTAATTTGTTACAGCAGCAATAGGAAACNAATGAA
>rnd-5_family-947#DNA/hAT-Charlie ( Recon Family Size = 46, Final Multiple Alignment Size = 41 )
GTATCAGTGGTTCCCAAACGCTCGGTTTCGAGATCTATGACGAAGTTTTC
GTCGGTCCNCGGCGAAATGAGAAAAATAAGGACAATGTAGTGAGTTTTTC
ACAAGCTAAATGTTCATTTTAAAAGGACTGTCCTTTATTCTGAGATTATG
TCCTTCCCTACNTTTTTGGTGTTAAAATGTCCTTTCTTTTATGAAATGAT
GGTGACGGTAGANAGGGTGATTGCTTTTTAACGCCTTACTTGGCAAAATA
AAAAGTTGGCAACCCTGTCAGTCCCCTCATCTTTAATTG
>rnd-5_family-1017#LINE/L1 ( Recon Family Size = 43, Final Multiple Alignment Size = 41 )
ATAATTATTAAAAAAGAAACTCAGTGAGATACAAGAGAATACAGATAGAC
AATNCAANGAAATCAGAAAAACAATTCANGATNTGAATGAGAAATTTANC
AAAGAGATAGATATCATTTAAAAAAAGNAACAAACAGAAATCCTGGAACT
GAAGAATTCAATGAATGAAATAAAAATACAATTGAGAAGCTTCAACAACA
GACTAGATACAAGCAGAAGAAAGAATTTCTGAACTTGAAGACANGTCTTT
TGAAATAACCCAGTCAGANAAAAAAAAAAGAATTAAAAAGAATGAAGAAN
GCCTACGTNACNTATGGGACACCATTAAGCGAACAA
>rnd-5_family-807#DNA/hAT-Tip100 ( Recon Family Size = 41, Final Multiple Alignment Size = 41 )
TGAACTTGTGTTTTGTAAGTGAAGTCCGATGGGACAATGGAGCATGCGCG
TGAGCAGAGGAGATGTGCAACGTATGTCCGCCGTTCCTTGCCGCCCCATT
CGCATATAGCGTTCGCGATGCCCCGTGAGCACAGAATTCCGGTGGACCCA
CGATGCGTGGGAGTTCAGCGAGACTCAAAGCGAGTACAAGGTAAGCGTGT
TACGTCTACGACTGAGTAAGTGCAGGGGGCGCTGACAGCCCCGAGAGGCC
ACGCTTTCCAT
>rnd-5_family-1343#LTR/ERV1 ( Recon Family Size = 43, Final Multiple Alignment Size = 41 )
GACAGGAATAATACAGGGTGGTCGCAGGAGAATAGAAAATTCCAGGCAGC
AGTTTCACATGACTAGCAAAAGGAAACTGTTGAAATAGCTGCAGAAGCTA
GGGGCTGATAAGACCCTGAAAANCCAGGGTGTGGGCCAAGCTGGCTAAGA
CCGACTGGACCCAACATGGCGCTGGATTTGACCTAGGTTTCACCTAGGAC
CTCATTATACGCTCATTAACATACTAAATCACACACCCACCAGCGCCATG
ACAGTTCCGGGAACACCCATATTTGGTGTAAAAATGGGTGGCACCACAGT
TCTGAGAAATCTCCACCTTTTTCCAGGAATCTTCATGAATATTCCACCCC
TTGGTTAAAGAAACCCATAAAGGTAGNAGCCCCAAACCCCGTTGTGCGAC
TCGTCTCTTGAGTACGCCCGCACTCCCCTTTCTTGAGTGTGTACTTTTCG
CTTTGCAATAAATCTCCGTACTTTCACTATTTTCTGACTCGTCCTTGAAT
TCCTTCTCGCGACGGTGTCAAGAGCCTGGACGCCGGCTGGGGTCGAGGTC
CCACCGGCGTTTGGGGACCTCCCCCAGCCCACCG
>rnd-5_family-60#LINE/L1 ( Recon Family Size = 41, Final Multiple Alignment Size = 40 )
GTTCTGCACATGTACCCCAAAACCTAAAATGCAATAAAAAAT
>rnd-5_family-1530#DNA/TcMar-Tigger ( Recon Family Size = 40, Final Multiple Alignment Size = 40 )
TCTTGTGATGATGTGAGATGATAAAATGCCTACGTGATGAGATGAAGTGA
GGTGAATGACGTAGGCATTGTGACGTAGCGTTAGGCTACTATTGACCTTC
TGACGATACGTCAGAAGGAGGATCATCTGCTTCGGGTGATCCTGGATCAT
CGAGCCGTGATGATGATGGTTGGATGTCAGGAGCAGACAA
>rnd-5_family-3482#LINE/L1 ( Recon Family Size = 44, Final Multiple Alignment Size = 39 )
AATATTACCGTGTACTACTATGAAGTANTCTCCAGAATACAGCGTTTNAA
GTGAAAAAAGAAAGGCAAAGTAGAAAAATAGAGGAATATAAAAATATGTA
TATATTGTTTACTTACATTTTTAAAAGACAATGGAAGGATAAACCGTAAA
TAAAATGGTTACCTGTGGAAGGAAGAAGGGAATAGAGGGACAGAAGCTAG
ACTTCTCTGAATATACCTTGTTTTGTAGATTTGACTTTGGAACCATGTAA
ATATTTTACATAATTATAAAACAAAATTTTAAAAAAATTTAAAAAGCAAC
TCCTAAAAAATTNAAAGCAAAATGAAACAAATGAACCTAATGTGTATCNA
GTTGGTGGCATAACCACACAAGAGAGNAATTATTTCAAGTGACTTTAAAA
CACAGTAATTTGACTGTACATNCCTAGTGGGATATA
>rnd-5_family-4200#LTR/ERV1 ( Recon Family Size = 40, Final Multiple Alignment Size = 38 )
GGCACTCCCGGGAACTCCTCGGGAGTGGGGAGAGATTGAGCTAGGACGNC
AGTTACNAGCTCTAGGGAAAATCGCTCAGGATATTTCAACCTGGGTAAAT
GAAAGATGCCCTGTAAGCTTATTCTCCCCAGTTCACCCTTTCTCACCAGG
TGATCGCGTGTGGATAAAGGACNGGAATGCAGCCCCTCTAAAGCCACGGT
GGAAAGGACCCCAGACCGTGATCCTGACCACTCCCACAGCCATGAAGGTA
GAGGGAATCCCAGCCTGGATCCACCACAGCCGCGTGAAACCNGCAGCAGC
TGAGACTTGGGAAGCTAGACCAGACCCAGACAACGACTGCAGAATCACCT
TAAGGACAACAAGCCTTGCTCCAGCCACATCCCGGAAGCTGGCTGGTCCA
CGCACGGCCGAAGCATGAGGAANTTCACCGTGGGACTTGTTCTTCTTAAT
ATTTGGACTTGTACAGTAGGGACATTAACTAATTTTGAAGAATGCTCTCA
GTGTGTACACCAGGTTACTAAGGTAGGGCGNAAAGTTACCGCCATTCTTT
TGTTCTACAGTTATTATGAATGTACAGGGACACAGAAGGGAACCTGTTTA
TATAATGGTACTCAGTATAAGGTGTGTAATCCAGGAGACGGACAGCCNGA
TGTTGTCATAACCCATCATTGAGCCCCCTACACGTCCACCATATTCGAAA
TTAAACTCCNACAGGACGATGGAATAGCCCTACTAAGTTAATAGCTAAAA
CAGAGGAAAAGGGAANNCCNAAGCAGGTCACCNTAAAGTTCGACGCCTGT
GCAGCCGTCAATGNCAATCAANTAAGGTCCGGGGTGCTGTGGCTCCCTCG
GNTGGGAACGAAGCTATACGGNAGAGCATAAGTACGTCTGCCANAAAACC
TGNTGGTGCGCAGTGGCTGCGCTNCTGGTCATGTGTCATCTGGGCCACTT
GGAAAAATAATAAAAATAACCCAGTTCGTCTCCTAAAAGGGAGGGACGCT
ATCCAGGGTAATGTCCCCTGCACCTCNGGNCATTGTAACCCAGTAGAATT
AATAATCACGAACCCCCAGGACCCTNAATGGGAGAAAGGGGAGNNTGTAG
CGNTGGGAATTGATGGAAAAGGACNTGACCCCGGGGTTAGCATCCNAATT
CGGGGAAANATCCAGAAACGATCAGCCCAGCCGGTGTNCCAACACTTTTA
TGATATATTAAATGAACCAGTTCCGGAACTCCTCCAGAAAAGACGAAAGA
AACTTGTTCCTCCAGCTAGCTGAGAATGTGGCCCANNCCCTNAATGTCAC
TTCTTGCTATGTGTGTGGAGGAANTACTATGGGNGACNGGTGGCCATGGG
AAGCACACGAGCCTGTGCCTGCTGACCCTGTCCCTAACGNGACCTNTGTG
CAAAAGGNCCNAANCAACAGCTTCTGGATCTCAAAGNCTTCCATTATTGG
ACAATACTGTCTGGCCAGAGNAGGAAAAGGTATGACTGGTCCTGGTGGNA
AANCTGGACTGTTTGGGACAGAAGCTGTATAATGGAACCATGTGAAACAA
TCACTGGTGGAGTTTAAATAGNACCGAGACCAACCCTTTCCAAAAGTTCC
GAAATACAGGCACGCTTGGAACTATCCACCACCGGGACTGGGTAGCGCCN
CCTGGGTTGTACTGGATATGCGGGCACAGAGCNTANACCAAACTGCCAGA
CCGGTGGACAGGCAGCTGTGTCNTNGGCACCATCAAGCCCTCTTTCTTCC
TATTATCCGTTAAGACAGGTGAGCTGTTAGGGTATCCNGTCTACTCCGCT
NGNGAGAAAAGCAAAGCCTAGANATAGGTGANTGGACAGATGATGAGTGG
CCNCCGGAGAGAATTATNGAATATTATGGGCCGGCCACATGGGCAGAGGA
TGGCTCGTGGGGNTATCGNACTCCTATTTACATGCTCAATCGGATCATCC
GGTTGCAGGCTGTTCTGGAAATNCTNACCAACGAAACTGGCNAAGCTCTG
NCCNCNCTGGCNCGACAAGAAACCCAAATGAGAAATGCNATCTACCAGAA
CCGGCTGGCCCTAGATTACTTGCTAGCAGCCGAAGGAGGAGTCTGTGGAA
AATTCAACCTAACCAACTGTTGCCTGCACATAGATGACCAGGGNCAGGCG
GTTGAAGATATTGTGAGGGACATGACNAAACTGGCGCATGTGCCTGTACA
GGTNTGGCACGGATTTAACCCCGAGTCNTTGTTTGGGGGTTGGTTCTCGT
CCTTGGGAGGATTCAAGACCCTCATCATAAGTGTTATAATAATAATAGGN
GCNTGCNTATTGCTCCCCTGCTTACTGCCCCTGTTCCTTCAGATGATTAG
AGGATTCGTCACTACTGTAGTTAGCCAAAAAATGACATCACAAGTNTATT
ACATGAACCATTACCAATCNGTTTCNTCAGAAAATCCGGANAGTGAGGNT
GAAAGTGAGACCTCTCACTAATATTATAAAGTGGTGAGGGTCTCAAAGGG
CGG
>rnd-5_family-26#LTR/ERV1 ( Recon Family Size = 60, Final Multiple Alignment Size = 38 )
TAAAATGGAGAGATTAGGAAGAAGGGAAAGAAATATTAAGAAAGTTATAG
ATATAAGAATGCCCCTTTAGTAAGGAAAGTTATAAAACAGAAAGTTAAGA
CTGTGATAGTTGTGAAAATGTTATGAAAAGGAATTTATGCAAGAAATGTG
TATAATTTTTGTTTTGAAAGTTTAAGCAGTTTTGAAATGTTAGTCGTAAA
GGAAATTCGGTGTGTAAACATATTAGCTAAAGTTAAAGCGGTATCATCCA
GTTTTTCTGTAAACTGGACATTAAAATAAAAGCACAACGGGTTTTTCTTA
AAGCACTAACCTGCTCTTTAACAAAGATTACAAAAGGTCTCTTAGCACAG
GCGCCACCCCTGGAGTTTCCAGTACACCAGCACCAGCCTGGGGAGGACCC
TACCTNGTGCTNCTAACCACCGAGACCGCNGTCCGNACAGCAGAAAAGGG
ATGGACCCATCACACCCGAGTCAAGAAAGCACCACCACCNCCGGAGTCAT
GGGCCATTGTTCCGGGGNNAGACCCTACCAAGCTAAAGCTAAGAAAAAAG
CTTAACTTTATTTNTTCTATTTCTTCTTTTTCTTTTCCTCGTTCTGTTGC
TNNCCACCTTGTTATTAATGTAACTAGGTCAGACTCACCTCAAGTCGTTA
TCCTTTGATGCTTGCCTNGTTATGCCTTGTGGAGATTTGCATAACCAAAG
ACAGCTCGCTNCTTCGGAAAAATACCTCTGTCCCTCTTAGATTTCCTCAG
ATTAGGAAGACATAATGAGTNCCTCTAAGAATACTAGTAATCCAAGGAAT
AGTAGCTGTATTCGTTATTGGTAGGAATCAGACTCTTGTCCCTCNAAAAC
AGAATCTCTGTGTTCTGCTTGGTCTAATGTCATNTGGACCACCGAAGGNT
NAAGATAGACCGCCTCCACAGGTCTTCGCCGATCCTTAAAACCATACGTC
CACTTTACCAAAGGAACTACTCCTTCTAATTGTCAACNNNACCAATGTAA
TCCNATGCAGCTTNCTATCGCTATTNCTGCCCTATAACATCTGAAAACTC
TTCCCCTTCATTAAGTCGCTTCTATGGTATAGGAGCCGACGTTTCAGCAA
AGGATCCTAAAGANATNTTTGAAATGCGCTTTATTGCTCCTTCANCCTCT
TCACCGTCACTCCTGATTCCNACCCCTGNCNCAATGACAAAACCAAAGTA
TCAGTGGTAGAAGTAAANGATCTAAAACAAACCNTAGCNATTGAGACAGG
ATATCAGGATGCAAATGCCTGGTTAGAATGGATTAAATATTCCGTCCGCA
CGCTAAATAAAAGCAACTGTTACGCTTGTGCGCACGGTAGGCCAGAGGCC
CAGATTGTCCCCTTTCCACTCGGATGGTCCTCTAATCGANCGGGCATGGA
NTGCATGGTAGCTCTCTTCCAGGATCCCACAGCCTGGGGCAACGAGTCGT
GCCAAGCTCTCTCNCTGCTATTTCCCGAAGTTCAACACCCTGCGGGTCAG
CCCCCGAGGGCCATCCGGCCTCCGTCTCCCGAGGCGAAGTTTACCTCGTG
TCTCTCATGACAGGGGGAGAACTTAGCGTTCCTTGGAAACCTAACAGGAT
GCAGTGAANTCAGGCACTTCCAAGAGCTNACCCATCAGTCCGCCCTTACT
CATCCCCGAGCGGATGTATGGTGGTATTGCGGAGGACCTTTACTGGACAC
TCTGCCAAGTAATTGGAGCGGCACTTGCGCTCTAGTCCAGTTGGCTATCC
CTTTCACCCTGGCATTTCATCAACCAGAGAAAGAGAAAATACAACACCGG
CAAANAAGAGAAGCCCCTTACGGGTCTTTTGACTCTCATGTTTATTTAGA
TGCAATTGGAGTCCCNCGAGGAGTACCAGATAAATTTAAAGCCCGAGATC
AAATAGCTGCAGGATTTAAGTCAATGTTGTTCTGGTAGGTAACAATNAAT
AAAAATGTAGATTGGATAAATTACATTTATTATAATCAACAGCGATTTGT
TAACTATACCAGAGATGCCGTCAAAGGAATAGCTGAACAATTAGGACCCA
CTAGCCAAATGGCCTGGGAAAACAGAATAGCCCTNGACATGATATTAGCG
GAAAAAGGTGGTGTTTGTTATGATTAAAACCCAATGTTGTACCTTTATCC
CAAACAACACNGCCCCCGATGGAAGCATAACAAAGGCCCTGCAAGGNCTC
ACCGCTTTATCNAATGAACTAGCTAAAAATTCTGGNATNAATGACCCCNT
TTCAAANTGGCTAGAAAAGTGGTTCGGTAAATGGAAAGGAACCATAACCT
CAATTCTTACCTCTCTNGCAGCCGTAATAGGTGTACTCATTCTTGTNGGA
TGTTGTGTCATACCNTGCGTCCGAGGACTNGTGCAGAGGCTCGTAGANAC
AACCCTTACTAAAACNTCCCCAACCCTCCTCCACCCTATTCAGATAGACT
NCTTCCTTTNGAAGANCAAGCAGAACAACGAAGTCAAGACATGTTAAANA
AGTTTGAAGAGGAATTATAAAAAGAAGGG
>rnd-5_family-3025#LTR/ERVL ( Recon Family Size = 39, Final Multiple Alignment Size = 38 )
GTTTTATGTGTCAACTTGCTAGTGCAGGCTGTAGTCTCCAGTTATTCAAT
CAAACACTAATCTAGGTGTTGCTGTGAAGGTATTTTGTAGATGTGGTTAA
NGTCCATAATCAGTTGACTTTAAGTAAAGGAGATTATCCTAGATAATCTG
GGTGGGCCTGATTCAATCAGTTGAAAAGGCCTTAAGAGCAGAACTGAGGT
TTCCCTGAGAAGGAAATTCCACCTGTGGACTGCAGCTTCAGCTCCTGCCC
GAGTTTCCAGCCTGCTCCTCGGATTTCGGACTTGCCTAGCCGGCCCCCAC
AATTACGTAAGCCAATTCNTTGCAATATAATCTCTTATCNTCATCTCTCT

>rnd-5_family-2247#LTR/ERV1 ( Recon Family Size = 56, Final Multiple Alignment Size = 38 )
GTGAGAGATGGGAAAGTTCTTCAAAGTTTATATCTTAGACTACATTATAA
GGAGTTACAATCTCTTGCTCTATGGCCATTATCCGCTATTAGCATAAACA
TATACCCATGTATATATATTCTCTAAATCAGCTACGTCTTAAATCAGCTA
CCTTGACTCGCTCCGGCATGTCTGAACAGAACTGGGCAAGCTCCAAACCC
TGGTGCATGCCATTCCTTATTTGGAAACCCTCCTGACCTTCCCCGACTAG
CTTCCTCTTCTTT
>rnd-5_family-930#LTR/ERV1 ( Recon Family Size = 38, Final Multiple Alignment Size = 38 )
TGTTGGGGCTCAGAAACCGATACCCCAAAATATGGCGCTTTGACATGCTG
AACTGAAGAAGCCTCAAGGTCTCTCTGACCTC
>rnd-5_family-1068#LTR/ERV1 ( Recon Family Size = 39, Final Multiple Alignment Size = 38 )
GGAAGGCAGTTGTGCCCTCGGCACCTCGGAAGTAGTTTCTTTGGGGTTGT
AGGAAACAAAGTCCTAGATCAGGGTCTACGAGNGCTCTTTGTCAGGCTGG
GATGGAAAACTGGTAACTGCCTATTCTGTCAGAAAAGTGTCCAATGTTGT
TATGGGCAGTGCCCGGTGGTGTATCACAGGGAGGCATACTGGCATCATCC
CAATTGTTGGGAATTCGGGTGCCATAAACCACTAAAGACAGATTGGCAAC
TCTTTTGCTCACTCTATGAATTGTGGTGGGTACAAAATACACACCCAGTT
GATCTATTAGTTCATCTCTTTTGCCACATCCCCACTTTTCCACGGGCTTT
GGATAGGAGAGCCTATAGTCGAGAGGATTATGCCCGAGCAGCACTAAACC
TCCATAGAGCTTATTCTCGCCAGTTGTGGTTTGCGGGGGGAGAGACCGCC
ACCTTACCCTGGCCCTTACCCCCTGTTCCTTTGGATAGGACTAGAGACAG
ACCCACCAATTCAATTGTCTGGTCCTTGCAGGACCTGGCTGCGGAGGCCC
TACTAAAACCTGCTTTAGAGAGGGCAAAATTTGAATTGGAGGCTTTCCAA
AATTGGCTATACCACAGAAAGAGAAAGACACGAGTAGTAAGCAAGAGTCC
CGAGAGAAAGGACAAGAAAGGCGAGAGAGAGGGAAGAGAGAGGAGAGAGA
AGNNGAGAAAGTAAGAGAGGGAAAGGAANAAGAGAGAGGAGACAGAAAAG
AGAGGAAGNAAANGAAAGGAGAGAGAGAGGAGAGAGGAAATAGGGAGAGA
GAGAGGAGACAGAGAAGAGAGTGGAGAGAAANAGGGAGACAGGAATTTAA
TGCTTTTCAGGGTCCCTGTGTCAAGGTGACCAAAAGCTGCAGGGGCGGGG
AACTCGCAGCCGGCCCAGCGGCTTGGAGCTCAGTTTTAAACTGACACAAA
AAGCGNTTTTTTTCTCTCTCTGCCGGCCGCCAGCCCCACCCGGCTTTCAG
GCAGGCCACACTGCCTCAGGGTGCAGTATTTGCATCTAAAATCTGGCTTT
AAGAACAGCTTTCTAACTCTTTGTAGTGCAAGTTACTTGTTAGCACAGCA
GTTAAGGGGNGTAGGGCCTGCAACTGCGAGGTTGTTGGTTCAAATCCTCA
GTGAAGCCAGTCTTAAATTAGTAAAATCTCTTGGGGGAAAATTCAAAAAC
TGAAGAAAACAACCAAATGGGCTCGTCACAGTCCCGACCNTGCACCCCCC
CTCCGATGCATGACGGCAAACTTTAAAGTAGGGTTCTCTGGCCAATATGG
TGTTAAACTAACCCCACGGAGGCTTCGGACCCTCTGTGAGTTAGAGTGGC
CAGCCTTTGGGGTAGGCTGGCCAGATACGGGGACATACGACCCCAAGATA
ACTCAGGCTGTCTGGAACATGGTGNCAGGGTCCCAGGCCACCCTGATCAA
TTTCCATACATCGATCAATGGCTGAGGCTGAACCAGCACCCCCCTCCTTG
GCTTGAAAAATGCATAAAGCGTGCTGGACTTCAGGTTATGCTAGCAGGCC
CAAAGAAGGGCCCCTCAGCGCCGGCCGTTCTTCCAGCCCCNGCNGAGGAC
CAAGAGTTGCCTCCACCGTATTCTNGGCCCTCTGGACCAAGGGGTCCCAG
CACCCCTCCCCGGACAGTACTAATAACCAGCCCTTGTCCCCCCTCCACAC
CCGNAGCGGGGCCCCACACCCACCGGCGGTCCTTCCTCTCCAAGAGGCGC
CCCCAACAGGAGAAGACAATCGGGGTCGCCCATTCTTTGTTCACTTCTTG
TCAAGTGACTTATATAACTGGAAGGTGATAGAAATTAAGGAGAGGGCCAA
AACACCAAGTGCTGGCACAAGCTTTATTAAGAGCAAGGGAAAATCTGCCG
GGCTGCACCCAAAATTGACACGCAGCACCTGTGGCATGGCAAAGGGGATT
TTTATGGCCTGCAAGCCAGCAGATGCCTCCAGTGTGAGGGGCTGTGCAGG
AGGGGAGGGGCTGGGGAANTGCTGAGTTTAATAGTTCCTGGGAGGGCTGG
GGAACTGCTAACATGGCGAGAGGGGGAGGGTTAGAAACCTGCTGAGATGG
AAAGTTCCCCGGGAGGGGGTCGTGCTGGGAAGCTGGGGATCTTAAGGCGG
TGGCAAGGTTTTACAATGGAGTAAGTTCTGTC
>rnd-5_family-230#LTR/ERVL-MaLR ( Recon Family Size = 50, Final Multiple Alignment Size = 38 )
ATTTTTAAAGTCTAGGCTCATGGTTTCTTTGGCAATACAGTTACTTCAAA
AACTTAGTAGNTTCTGATCTATTTGCTTCCAGTCAGTTCCATGTGCCAGT
AACACCAAGGTTTCCTAGACATAATTCTCAAGCCTGATTCTTTATTTCTT
TGCTTCCTCGCCCCATGCCTCTCCTCTCTCAACTTAATGGCGGCTACCTT
GAGGCCATCAGACTTAAGTGGGAAGGCCACACCCTTAATCTGATCTTTGC
CGCAAGGCTGAGTCTTAATGGGCCTTTGTCGCTCAAAGCCTTTTTCAATC
TTATTTCTTACTGTTTGGAGTCTAGAAGGCAGTCGGCTTTTCCAACCCTN
CGAGGCCCCGAATTTCTGGTCTTTCTCTATNTTCTCTTTCATTTCTGCTT
GCAAACCGGCCAATTCTTTCCTGAGCTCATCTCTTTCTTNTAATACCTTG
CTAAACGCAGCCAATAAATACAACCTACTAACATCTCGTTTTCCAACCTC
TTCTAGAGCTACAGGCTCGGTAGGCACNTGGTCTGCCTTCCAAGT
>rnd-5_family-3004#Unknown ( Recon Family Size = 48, Final Multiple Alignment Size = 37 )
TTTAAAATCTCAGGCTNCCTGCTCAAAGGACCGGAAGCCAGGAAGGTCAT
AAAATCTGAAATTTTAAAATAATTATTATATTNTTTTNATTTGTGAGTAG
CCGTATATATATTATTTATAAATGCATATGACCTTATACACAAGGTTAAA
TGCAAATACCCTCTGGGGTGGGCCTGGCTCAGCNCAGGGAGGAAGCCCTG
CCTGAAAAGGCTGCAGCCTAGGCTGTCACTCTCTTCATTCAGCCCAGCGT
CTGGTCGCGTCTTCTGTCACTCAGGGCCTGAGGGGGCGGGGCCTTAAACG
TTATCCAATCAGGGACGCTGGGCTGGGAACCGTCCAATCAGGCACGCAGC
CGGAGCGGACGGGGCGGCTTCCGGGATNTGGCGGGGCCTTTGTCTCTCGC
TGCAGCCGGAGCTCCGGGTCTCGTCTTCGCTGCTGTGTCCTCTGCTCCTA
GAGGCCCAGCCTCTGTNGCCCTGTGACCTGCGGGTATTGGGAGATCCGCA
GCTAAGACGCCGGGACCCCCTGGAAGCCNAGAAATGGTGAGNGTGCNGGG
CGCGGCGTCCCGAGAGAGGGAGGGGCTGGTTGGAACCGGCGGGAAGCGGC
TGCGGCGGGACTCGGGCCTCCCCGCGGTCAGCTCCGCAGTCTGCGCCCCG
AGTTCTCCCTGGCCCAGCTCGGCCTCAGTCCCCTTCAGCCGTAAGATGGC
GGCTGNCGCCGACAGCCGGGGACCCCGGGCGTCCTGTCTCTTCCCTGCGC
AGCGACTGTGCCCTGGCCCGGAGCCCTCTCTGGGCAGCTCCGCACCCGCA
GCGCCGCGTCTCTCCCAGATTGTGCGGGGACCACGGGAGGGTCGTCGGGG
GAGAATCCTGACTCGGGGTGCGGGTTCATGAATGGGAAGAGCTTTGGTCC
GTGGGGTCCCCAGTCCCTCTTTTC
>rnd-5_family-510#LTR/ERVL-MaLR ( Recon Family Size = 41, Final Multiple Alignment Size = 37 )
GGTAGGCAGAATTCTAAGATGGCCCCTAGATTCCTACCCCTAAGTCCTCT
GTATAATCCCCTCCCCTTGAGTGTGGGCGGGACCTGTGAATATGATGGGA
TATCACTCCCGTGATTAGGTT
>rnd-5_family-4324#LTR/ERV1 ( Recon Family Size = 40, Final Multiple Alignment Size = 36 )
TGTGCCCCAAAGAGTTAAAGAAACCAGTGACTAACAGAAATTCTTGAGTT
TGCAGGATGGCAGATAAGAAAAGAAACAACTTGCTGAAACGCTGAAACTC
CCTCCGCTTGTGAGATAACAAAACTGGCTGAAATCGGTTGGAACCAATAT
GGCCAACTGGAGTCTGCGCAGAACGAGCTTGCTGACGTCACAGCCTGAAT
TTCCACCGCATGTTTCATACTAACTCCCCCGAATTTGCACATGCGACCCA
TGAGGNAGCATGAAGAGATAACTGCGCATGCCCGAGGACTTTCCAGACCT
CCCCTTTCCTTCCACCAATCACCTACTAATCCCAGAATCCACCCCCTAAA
CCTTTCCTAATAAAATTACTGCCTTAAAGCCAGCACAGGGAGACAGATTT
GAGCTGGACTCCTGTCTCCTTGNNAGTCGACTTGCAATAAAAAGCTTTTC
TTTTCTCAAAAACCCGGTGTCATAGTATTGGCTTCTAGCGCATCGGGCAG
CGAGCCCCTTTTGCTCGGT
>rnd-5_family-878#LTR/ERV1 ( Recon Family Size = 69, Final Multiple Alignment Size = 36 )
AGAGCAGGAGCACCGTCATCTCGGACAAACACCGCCACTTTAAGTTCCAG
CTCCCTTTCTAGCCTCATGCATTTCAAGGAAATCACTTCTCTTCTAACTA
CAAGCAGCCAGAAAGAGCAGACAGTAAAACACAGATAAGACAGCTCGGGC
ACAGAGGGAGGTGGGGGGAAAGTCTCTTGGGTAACCGCCAAACTTCACCC
TCATACAATGGGCCCCAGTAAAACAGTGGGCCTTAATAAGCACATTCCTT
TCCCTTCAGGTGCACTAAGATAGGGAAGCTAAAAGCAGACTCGGGGGGTA
TGCCTGCAGCTGCAGGAAGATGTATGGGAACAGACACACAACTCTCCCTC
CCAGATAAGCACGACAAAGAGACACAGAAGCAGTCCAAGCCTCTGATAAA
CTCTCCCACCCTGAATCCTTAAAAACTCTTAGTCTGTAAGAGAGNGTGCC
TCTGACCTAACTCGGCCAGAAGCCCCTCTCAGGTTTGTTTTCTCTAAAAT
AAACCTGTCTTTGACTGTCGAGCCACCTTTCGTGTTTCTTTCCTCTTTCT
TTAATTC
>rnd-5_family-231#LTR/ERV1 ( Recon Family Size = 44, Final Multiple Alignment Size = 36 )
TCTCAGAATCTGGAGGAAAAATGCCTCATAGTCCTCTGCACAAAGGTTTG
GCCAAATTATNATCTGCAGGAAGGACTGGCTTGGCCTCAGGAAGGAACCA
TTCATTTTAATACCATCCGGCAGCTGGANCTTTTCTGTAGACGTGAGGGC
AGATGGTCCGAGGCCCCATATGTGCAGGCTTTCTTTGCCTTGCAAGGCAA
TCCAGACCTTTGCCGACATTGTAGGATTGATCCAGCCCTCCTAGTNGCCA
TCTCAGGAGAGGCTGCAAGGGGCAATCCCAGGGAACTAAAGAACGAGCCC
CAGAGGCACCTCCAGCAGGGGAGCCAGCTCCCTCCGGCCCTGCTCCTCCG
GGTCCGCCCCGACCTCCCTATCCAGCTTCAGCCTCTCACTTGCCCCCTCC
TAGAAATCCTCACTCTAGACAAGCCCCAGTCTCACTCTTGCCCTCCAACA
GATGCCCGGTGAATNTGGCCCCAGTGAGGTCCAGGTTCCCTTCTCNCTAC
AGGACTTAAAGCAAATTAAGGGGGATCTTGGCAAGTTTTCAGATGACCCT
GACAGGTATATAGAGGCTTTCCAGAATTTAACCCAAGTATTTGAACTCTC
CTGGAGAGACGTTATGTTACTTTTGAATCAAACCCTGACTGACACTGAGA
AGCAGGCCGCTCTGCAAGCGGCAGAGAGATTTGGGGATGAGCTTTGTATC
TCATATAGCGCCAGGGAAGGGGANGAACNTTATCCAACTGGAAGAGAAGC
AGTACCANTGGATGACCCTAAATGGGACCCCAATGACGAGATGGGAGAAT
GGAAAAGGAAACACTTTCAGGTTTACGTAGGACTAGGACCAAGCCTCTCA
ATTACNCTAAGCTATCCATGATAGACCAGGGATTNGATGAAAATCCCACT
GCCTTCCTGGAAAGGCTAAGAGAGGCCTTGGTAAAGCACACCTCTCTATC
TCCTGATTCAGTCGAGGGACAGCTAATCCTAAAGGATAAGAACAGTTATC
TCTCTTCTAAAGTTTATCCGCTCCCGTACAAGGTTTAATTTCTTTCACCA
GGGTGAAACAGCTCGGAGTACAATGTTGTTGTTAGTATATTTCACTTCTT
ATCTCTGTAATCTTTGGCACTAAATTCTTTCCTTGTATAATACACATGTT
TAACCCAT
>rnd-5_family-13565#DNA/hAT-Charlie ( Recon Family Size = 35, Final Multiple Alignment Size = 35 )
GGGTGTCCAAGGGAGAGAATACAGTCATGGGTTCTTAGTTTCTGTTTCTG
GTTGGGCCAGTAAAGCCCCTTCCTCATCCCTCTTTTCCGCTTATCACTAG
AGACAGAAACTAAAAACCATGGCTTCAGGCTGCTAAAAGCCTAAAACAAA
ACAAAACAGAACAACAACAACAAAATAAGGCGGGTTGGACA
>rnd-5_family-813#LTR/ERVL-MaLR ( Recon Family Size = 42, Final Multiple Alignment Size = 35 )
TTTTTCTTGGGAGTCCCTTCTTCTCCAGTCTCGGTCCGTGTGGTTTGGGA
GTGGGGTTGACCCCCACTCCCCTAGNTCTAAGGGCGGGCATGTGACCCAG
GCCTGGCCAATCAGCACATTTCCACCCCTTGGCCACAGTGATTGGTTCAG
GGATGGGCACGTGACCCAANCNGAGCCAATGAGACTCAATTCCGGGACTT
TNGTTGGAGCTTCTGGGGANACAGTTTTCTTCTAGAAAGACTTGGAGNTG
CTGGGAGCCAATGCTGCCGCATACAGAGTCTGCCTGAGAATGAAGCCAAC
ACAGAAGAGCAGAGCTAAGAGATGGAGAGGATTCTGACGACCTCAGTTGA
ACCCTGAATCNAGCCGCGCCTGTGTGGCCAGCTATTTCAGTTACATGAGC
CAATNAATTCCCTTTTTGTGTTGNTTAAGCNCAGTTTGAGTGGGTTTCTG
TCGCTTGCAANCAAANGAAATCCTGACTAATAGATCCCATCTGTAATTGA
GGATGAAAACATTCCAACCTCAAA
>rnd-5_family-1311#LTR/ERV ( Recon Family Size = 36, Final Multiple Alignment Size = 35 )
AGAACGTGCATAGAATGTCTGNCTTCAAGGGTTCCCAGCCTTACAGTGAG
TAAAAATTGTCACTTCCTGGCAGGCCCAGGAACCTTAAGACTGCAGGCGA
AATCTAAAGTCTGCCTTGGTTTGGCTTCCTAGCCTCAAGAGGTTTTTAAA
TCTGAGATTCCTATGTGATCAATGTAGGAAAGAAAAGCTATGTCTTCTTA
AATGAAAACTNNAATGTACACAGTTGTTATCTACCCGTAGACTAGACTAG
ATCCTGAATTCTTCTAAGTTCCTCCAATCTAACCTTCTTCCATAGAATTA
CTAAAAACGGGANCTGCTCTGTTTCTAAAGCCCTATAAGNTGAAACTAGA
CGAATTTTAAGGAACAAGTCTCGTGCCTGATGTATGGGCCACACAGAAAG
TCACCAAACCGCCCGATGCCATAACCAGAGACATTCAAACTGCAAACCAG
GACGAGAAGTTGATGTTTTCACGCTGTAGACAGCTTTTCCCAAGACGTCG
GAACAAGACTCCATATCATAATGAGACTCTTACCCCTCTTAATGCTACTT
TTTTCACTTGACAGGATAATGGTGTAATTGAAATTTCACAATCAGTAGCT
TCTGCTGGTAACTTGACAGAACCTGACCTAAGAGATCCTCTAGTCCATCT
ATTGGTTAAATAAGAAAGCGTCTGTGCTATTGCTAATACTACATGCTGTA
CCTGGATAAATTCCTCTGGGGAAGTTGAGACCCATATACATAAAATAGGA
AAGCAGGCCACATGGTTACAACAGGTCTCACCTAATTCCCCATGGGTCTT
GATTTATTCAGTTGGTTGCCTTTAAGCCTAGGTTCATGGCTCAAAACTAT
TATGCAAACTGGGATTATCATATTAACTACTTAACTTTGTATCTGTTACT
TGTTAAATTTCTGCAGAAGTACAACTCCTAACAGAATAATGCTGGCCCAG
CACTTTGAGATGATACCAAAAGACTACAGAACAGACAAAAATTGAACTTA
ACAATGGACTCCAGGTAGATTTAGCCTGAGAGCCACTCCCTCCAAACCTC
CCTTGTCGCTCAAATGTGGCTAAAAGGGTTTTGACACTGACTCCTAGTTG
CCAATCACTCCCTCCGACGTGGGACCAGACCAGCAACCGGGACAGGTCCA
TCCCGGCACCGAGGGACATCAAAACCTAACTACAGGATGATTGATCAGCG
ATGCTTTCAGAGAAAGATCTTGATCAAAAGGGGAAAATG
>rnd-5_family-6483#LINE/L1 ( Recon Family Size = 38, Final Multiple Alignment Size = 35 )
TTTGGGTGATAAAACCATAAAAAATGCAAGGAAGTGATTACTATAAAAGT
CAGGATAGTGGTTACTTTTGAGAGAAGGAGGNGGAGGTTGTGATTGGGAC
GGGCACATGGAGGGACTTCTGGGGTGGCTGGCAAAGTTCTATTTCTTGAC
CTGGGTGGTGGTTACAAGGGTGTTCGCCTTATAATAATTCATTAAGCTAT
ACATTTGTTTTGTGTGGTTTTCTGTATCTGTGTTTTATTTTATAATAAAA
AATAT
>rnd-5_family-1833#LTR/ERVL-MaLR ( Recon Family Size = 42, Final Multiple Alignment Size = 35 )
GTTGTGGNATCTGTTGTTTCTACCTGCCCAGCACCCATTNCTCCTCTTCT
TCTGGTAACAGCACCTCGATTTTCCTTTGAAAACTCCTCCCCTTCTCAAT
CCATGTGGAGNTGACTCCACGCCAGGTTCAGGTCAGGGCGTGGTACTCAG
GCCTGGCCAATCAGAGCATTCCATTCTCCTGGCCGCAGTGATTGGTCCAG
GNNTGGGCACGTGACCCAAGCCGGGCCAATGAGACTCAATCCTGGGACTT
TTGCTGGAACGACTGGGAAAGAGACGCNTTTCTTCTGGTGATTTGGAGCT
GGNAGGAGGTAAGCCTGGAGAAAACAGGNGCCAGTGAGGGAGAATGAGCT
GAATCAGCAGAGANAACAGCAG
>rnd-5_family-3078#LINE/L1 ( Recon Family Size = 40, Final Multiple Alignment Size = 35 )
TTGTACATACTTTTTTTANNTTCCTTTNTAAATACTACATACAAGCTATC
TTTTTTCTTCCCAAGATGGCGGATTAGAGGCTTTTAGCATGCCTCAGCCA
CTTGGAAATAGCAAAATAGTGCGTAAAGATTAACTCCGTGAGCTTCAATT
CAAGAAGGAAAACGGGAATCCACCGGAATCATGAAGGACACCCCGAATCC
CAGGGAGGAGAACGCGGGCAAACAGCCCCCGTGACGGCGTCCGGCTGATA
AAATGAGTGAAGCCCCAGTATATGAGAGAGGCAGAGAGCCTCCCTCTGTG
ACTCACCTTTCCACTTGGGGANCCGAGCAACCCAGGCTACAGAGAGGAGG
GAGAACNCTTTGTTTCTCCCAAGCCCTGGAGCTAACTTGGGGAGAGGCTT
GGAGACGCTGAGAGGGAAAGACACTGGGAAAAGCTGCAGGCATTTTCCCA
GACCCGGGACCAAGAGCAGGACGCCATTTTTAATCCGGGCGCATACAAAG
TCAGCCATTCTTTTTGGCGACCCGGCAGCGTGGCCGTGCAGGCATTTTAG
TCTCAGGCCAGAGATTGGAGCGCCTGCTCTGGAGCGGGGTAGGGGCCTCC
ACAGCCAGAACTGTGGAAAGCGCCTCAGCAGTAGGCGCTGGAATTGTGCT
CTCCCCCGTCGCAAGCCTGGGGCGGGAGGAGAGCTGCTACAGCTGCAGTT
TCTCCTGGGCGGCGAGACTTGCAGCCAGGGCCAGCTTGGTAACCTGGAAC
CGGTCTGCGTGTGCCATTGCTGGGTGCCCCAGCCTGCTCCCCTGAGATTG
TGGTGCAGCGGGGCCCTCTCCGCTCCACCCCCAGGCAGANCTCCAGGCAT
TCGGAGCACNCGCTCGCCTGGACCAGCAGCCTGAGCCGCCCCACCCTTCC
TGGGCANAGATCGTGGTGCAGCGGGGCCCTCTCTGCTTCACGCCCAGGCA
GCACCCGCTCGCCTGGACCAGCAGCCTGAGCCGCCCCGCCCTTCCTGTGC
AGAGATCGTGGTGCAGCGGGGCCCTCTCTGCTCCACGCCCAGGCAGATCT
CCAGGCATTCGGAGCACCCGCTCGCCTGGATCAGCAGCCTGAGCCGCCCC
ACCCTTCCTGTGCANAGATCGTGGTGCAGCGGGGCCCTCTCCGCTCCATG
CCCAGGCAGATCTCCAGGCATTCGGAGCACCCACTCGCCTGGATCAGCAG
CCTGAGCCGCCCCACCCTTCCTGNGCAGAGATCNNGGTGCAGNGGGGCCC
TCTCCGCTCCACGCCCAGGCAGATCTCCAGGCATTCGGAGCACCCGCTTG
CCTGGNTCAGCAGCCTGAGCCACCCCACCCCTCCTGTGCAGAGATCNTGG
TGCAGCGGGGCCCTCTCCGCTCCATGCCCAGGCGGATCTCCAGGCATCTG
GAGCACCCACTCTCCTGGATTAGGAGTTTAGGCTGCCCCCATCCCCATGC
AGAGAACTTGGGGCCGAGGAGGTTTCCCAGCTCCATGCCTAGGCACACCT
CTGGGCACTTGGTGGCCACCCACTGGATTCTCCCTCGGCGCTGGTGCTTG
TGCCTGCCATCGGGGGACCTGTAGGCGGACCTGCCCGGTCTGGCCCCGCC
CATCTTGACCCCCACCTCCCTGGGGCTGAGCAGGGAGCTCAGACCACTGT
GCACTCCACGAATCAGCCCACTGCCTGAGGCAACAGAGAGCTTCTCCCAG
TAAACAAGGATCAAGTATATACCCAGCCACGTTGGCCGCAGCCGGCTCTT
ACCCGTAAGCGCCATCTACTGGCTTGTAGGTCGAACTGCACAGCCCGATA
TAAAACCTGCCAANAGAAGTGCATAGGGCTATAGAAGCAAAGCCAAAAGA
CCCTACCCAGCATTCTCTACAGTCACACCCCCTAGGGAGGGGGGGAGAAG
GGAAAGGGAAAGAAAAAANAAACATAATAATTATAGGGAAAGAAAGAAAA
AAAAAATCCTACCCGCACGAAAATAATTACAAAATTAGAAGTGCCAGCGT
CTCCAGATGAGAAGAAACCAGTGCAAGAATTCTGGCACCATGAAAAATCT
GAATGTAGTGACACCACCAAAGGATCGCACTAGCTCTCCAGNAATGGTCC
CTAACCAAAATGGAAACTCAGAAATGANAGATAAAGAATTCAAAGCATGG
ATTGCAAGGAAGCTCAACGAGATCCAAGACAAGGTTGAAAACC
>rnd-5_family-1696#DNA/TcMar-Tigger ( Recon Family Size = 35, Final Multiple Alignment Size = 34 )
TTTCACAGATAAGTTCAGTCAAGTCCCAATGTACGTTTATTTTTGGCAAA
CTTTAGGAGCTCAGCAGNGATNAGAAGAAGGGAAGAGAACGGAAGTAATT
TAAATAGTGCGGGCAATTCCACCGGCCCTTCGACTCAATACATACGTCCT
GAGGCAGANATGGAAGCTATATCTGCCGTTCCTCAGTTGGTCTTCAGTTC
CCGCATGCTTCTCACAGCGTGAGCATCTCGCCGTGCTGAGTGTATTCTAA
TGTTTAAAGATACATATTTTTCATACAACATGGCCCCTAAACGCAAGCCA
ACTACTTCATCTGGTGCTCAACCGAAGAAACAGCGATCTGTTCCAACGCT
GGAGGAAACGTAGTCTGTGTTGGATTCTGAGAGCGGTATGCTGGTCTCCA
ACGTGGCCCTTCTAAGGGGATTTCAAGGGTAATTTTGACTACGTGCNNTT
TTCGCTTNACGNGCTGACTTTAGAACCCAATCCCCTGT
>rnd-5_family-704#Unknown ( Recon Family Size = 38, Final Multiple Alignment Size = 34 )
CAACAACATGTCTTTTCCATCTGAAAAATACACACAGCTCATTCTGTGAT
GCAAATATAGCACTNAAAANTGTACACGTTNGTGTTTATGCCCTTAGTTT
TATACTTTATTATCCAGAAAAGTATCATNTATACACTGGTGTTGTGGATC
TTATGCCACTCTCTTTTCTCAGAGTTAGAGAATACATTAGAGAATATTTC
TGTGTTAAAAATTATTTTATTAGATAATTTCAGTCACTCCTGTAAGTCAG
AACCAGTTCTCTTTACTCTCTCATTTTACCTTGAGTCAAATTANAAATTC
TGCCCATGGCCACTTGGTAAATGTGTATGTTTGTGTGTGTGTGTGTGTTT
TCAGGGACCGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGAGG
AGTGGCAATGCCTGGACNCTGCACAGCGGAATTTATATAGAAATGTGATG
TTAGAGAACTACGGAAACCTGGTCTTCCTGGGTGAGAATAACTTCAATAC
GCAATTCCTAATATACCCTAAAGGTTTCATTTCTCTTTTTTGTAGAATGN
TTTTTGGTAATTTATGCTTTGCATAAATGAGTTTCAGATCCCTGTTTTCA
AGAAAATCTTGAGGATTTGTCCATGTAGAAAAAAATTTCTTTAAGATGTT
TTATCTTGACCTGAACTTTCTACATTCCTGAGCTGATCTGTGTCCTTCAC
TCTAGATTAGTGGTAATTTCAGAAATTTAGTGGCATAAAATATTGTTGCC
CACACCTTAAAATCTAATTGCCACCACCAATTTTTGATTCAGTAGTACCG
GGTAGTGAAATTAAGAACCTACAAATTTAAAATNTTCTGTTATAAATCAG
TATTTTGGGATTANTTTACTAGAATATTCTATTACATCCTCTTTACTGAG
CACANTACTAGGTTGGTAATTGGAGAATATGAGCAAGATTCATGTNATTT
ATTTTTAATAAAACAGGTATTGCTGTCTCTAAGCCAGACCTGATCACCTG
TCTGGAGCAAGGAAAAGAGCCTTGGAATATGAAGAGACACGAGATGGCGG
CCANACCCCCAGGTAGGTGAGAGTGAAGTGAATACAACAGACGACACAGA
TGAGAGGTCCAAAGGTCAAAGAGAAAGCCAGTCCTTANAATGTGATTTGG
GAAGCTGTGTTCCAAAGGAAATAGTTTCTGGGAAGCCTGAGTGTTTGTTT
GTTTTTTTGTTTTTTCTCACATAGGGACATCTTCTGTCTTACGCTTTAAA
TTCTCTAAGGATTCTACTTTCCCTTCGGTGATCTTCCTTCAAGTTTACAG
TGAGAGCCAAATGTCCTCTTCATGGCATATAAGAGACTGCGCAATCCGAC
TGCTTTTNCATTGTTTTTGGGGACACACAAATATCTGCATAATTTTGAGA
AACTTTATGTTAAACNATTTTTTTAAGTTNTCTTTTTGCATCATGTCTGA
AATGTGTGAGAGTAGTT
>rnd-5_family-2795#LINE/L1 ( Recon Family Size = 67, Final Multiple Alignment Size = 34 )
CTGTTATAATAAAAGAAATGCAAATTNAAAAGAAACTGAGATATCAGTTC
TTTGCTATCCATCAGATTGGCAAAGATTNAAAAGCTTTATGATAACATAC
TNTGTCGGCGAGGNATGGGGAAACAGGCACTCTCGTACACTGCTANTGGG
ANTGTANATTGGTACAATCTTCTCTTTATGAAGGGAAATTTGCAATATCT
ACCAAAATNTACAAATNCGCGTATCTTTGACCCAGCAATTCCACTTCTAG
GAATTTATCCTACAGATATACTCGCACGCGTGATCACAAAACGATATATG
CACGAGGTTATTCACTGCAGCACTATTTGTAATAGCAAAANGTTAGAAAC
AACCTAAATGTCCATCAATAGAGAGCTGATCAATTAGATAGTAACATCCA
TAAAATGNAATATGTTACAGACGTTTTAAGTGTAAAAGAAAAATTTAAGC
TTTATATACAAACATACGAATATCTCCAAGATATATTAAGTAAAAATNCA
GTNNAGTAGTAAATTGTGAGCCCATA
>rnd-5_family-3809#LINE/L2 ( Recon Family Size = 49, Final Multiple Alignment Size = 34 )
CTCTCTGTAATCTATTCTCCACACTGCAGCCAGAATGATNTTTCTAAAAC
GCAAATCTGATCTGTCCACCTCTCTGATTTAAANCTTTCAATGGCTCCCC
ACTGCTCTCAGGATAAAGTCCAAANTCCTTAACATGGCCCACAAGGCCTC
GCCTGACCTCTCTGGTTTACCTCCCCAGCCTAAATCTCTTATTCCCTGCT
GTTTTCTAAAATTTGGTCCTGATAATTTTGTCTCATTNCACTCAGTCTCC
TTCTGAGTCTGCNGTATTCCTCTNCCTGGA
>rnd-5_family-2456#LTR/ERVL ( Recon Family Size = 40, Final Multiple Alignment Size = 33 )
GTAAGGNACATGGNTGTGCTTTGGTCAAGGATAGGCCGAGGCAGACATCC
AGGCCTGCGTGACTCAGCGAGTTTGGAGCGCAGGCGCACAACTCCGCTTG
TTATATAACCACAGCTATGTAGCCGTAACATGGGAAGGCTCATCACTTGG
CTCTGAGCCACTATTGTCTGTAAAAGGTATAACTGCCCTGCTGACACTGT
TGGGCTCGCTCGACAGGCGCGCTNGCGCCCAGAGAAAGAGAGAAAGCCAG
AGCTGTCCGTCTTTGCAGACGGACAGAGGGGAGCCAGGACACAGCTCAGC
TCGCTCGTGCCCAGAGAGAGAAAGAGTTAAGCTGCTGACCCTGAAGGCAA
GGGAGAGCCGGCCGCGCAGCTGCGTGTGGGAGCCGCGGCCGGCTCAAGCA
GCCGAGACAGAGCGGACAGTGTGAGAGGGCTAGTGTGAGAGAGCTGCTGA
ATGAGAGAGCTGCTGAATAAAACCATATTTCACCTGCCTACGGCCCCCCG
AGTGTTCTTTCAGCTATCTGCCCATCCACCCACTCCCCTCGGACCTCAGC
ATGGGCTGGAACCTGACCCCGGGCGTGACATTTGGCGTAGTCGTGAACC
>rnd-5_family-1375#LTR/ERVL ( Recon Family Size = 34, Final Multiple Alignment Size = 33 )
GGGGAACGGCTCCGCCATGGCGCCCTGGCGACCTTGCACATCCACATAGG
CCACGTAGGCAAGGCTTGAACCACGGCTNATCTGAGTCTTGGCAGAACGC
CTTGTGATCCTCCCGGAACACGAGAGGACGGGAGGCCTGTGAGGAGCTGC
TNCGAGGCCGTCTCCCACTCGCCTCCCTNTCTCCCCGGGAGGCTGTCACG
AGNCAGTTTCTCATTGCCGGATGAGGTACGGGGCTTTCTGCCCTGCCCCC
CTTAGGGTACAGCTGCAGGCTATAAAACCGCTTAGCTGCAGTCTAGAATT
GGCTCCTCAGCAACGGGGTANCCCACCACTCGTGTTGCCAGTCATCCGGC
CCCTTTTGTTTCGGTGTCGTNCCCTTTGTGTGTGGGACAAGNGCCACAGG
GAGCTGGCACCTTTGGCTACTCTTCCTTTCGCTGTCTATGTAAGTAATAA
ACTGTCTGAATCTAAAAGTGGCTCGTTGTNTCTTTACCGGCCGAATCAGT
CAGGCCTTGGCCTTGCCTTGGCCTTGCCTTGCGTGCTTGA
>rnd-5_family-23#LTR ( Recon Family Size = 37, Final Multiple Alignment Size = 33 )
CTAGGTCAGTNACATTCGAGTNTTATATTCCCNTTTTCGAAAGGCTATCC
CTACTGTGGAGACGGATACATCAGGCCGTCTNAGTCCGNTGCCATTAAAA
TNCCTNAAATCATANAACTAANTCTCCTTGCTCTGATTCCATACTCACCA
AGCAACCTTCTGATTATAATTTGGCTTCCCACGTAGGTTTGCCTACAGGG
AGAGAATGTGCTGGTCAGCCGACACGAGTATTCCGGTCCCCNTGATAGTT
GCATTTCTCATTGTAAATTAATAAATTGGCAT
>rnd-5_family-377#LINE/L1 ( Recon Family Size = 36, Final Multiple Alignment Size = 33 )
TTAGCAAGATGGCGGANTAGGAAGCTCTAGGCCCTCCTTCCCCNCGGAAG
ACGCTGACTTANCAACAATATANGACTAAATACTTTTATGAGAACTCTAG
AAACCAGTTAAGAAGCTGCAGTACCCAGGCGAGCATCAAACTAAGAANAG
CCGCATGAAAGCGGTAGGAAAANTCACCGCATTTTTACTCACNTCTGGCC
CTACCCCCACCCAGCACACGCGAGGTGATCCGGAAGANACCTTCCAGNTC
CNGGCTCCTTCCCTAGGANAGGAAAAGAACANAACTGTGTCCAGCGTNCT
GGCTTNTNTGGGGGCTGCCNAAGGACGTTCTCCCCTGNCTCGGAGTGCTG
ATGGGACCGTGCCAGCATACCAGGTTNCGGGAGCCACTGAAAACAGAGGT
GAGTGCTCGGCGGTTAGCAGCTACGGTTTCGGAGGACCTGTGGCAAGGAG
GAAGAGATTACTAGATTCCTGAGAAGAAGCAGTGGCAAGTATTTAGGGGA
TCTAGGACAGCTAAAAGCACACGCACAGGCCCAGAGAAGACGCATCCCCG
GAAAANGTCTCAGAGGNCCTAGAACCTCTAGCAGCTGATTGGTGAAGGTC
TTCCCCTGCATAAAGCCAGTTCGTAAAGATTGGAGAGGTGACTGTTATTT
TTCGAAATGNCNNAATCTCAGACAAAAGATNAAANGCGACAAANAAACAG
GNAAAGATGGCCCAATCAAAGGAACAAAGTAAATCTCGAAAACGTACCNT
AAAGTACCANATATAGGTAAATTTATAGTTGNCTNANAAATGAANTNAAA
ATAACTCTTTTAAAATCCTTGTCACCAAATTTCAAAACATGGTTGTAACC
TCAGGGTTNGTCTTCGCTGATTGTCTTTTCTCTTNGGAATGGGTCACATT
TTCCTGGTTCCTTGTATGTNGAGTAATTTTGGATTATATCCTGGGCATGG
ATAATATTATGTTGTAGAAACTCTGGATTCTGTTATATTCCTCAAAAGAG
GATTATTTGTTTGTTTATAGCAGACAGTTAACTTGGCTGGACTCAAACCC
CAAACTGGCAGCTCAAAATCTCAGTTCAGTTCCTTAGCTGAGCGCTTTGA
GTCTGCCCCGCACATACGTGGTTCAGGGGTCAGCCAGAGATTCGGGNAGA
GTTCATATACAGAATTGTGGAGCTTCCCCTCCTCTGGCTCTCTCCTTTCC
GGGATTCTCTCCTNACTTCATTTTCCAGCGGCTGTGGTTGCCCCAAACTC
TGTCCTCTGNTTCTTTAANCCAGAAAGACNGCGGGTTTTCTATTGGAGTT
TTAGCCACCCTACAGCACTATCTCGGCCTGCCCTCAGGCTAAAAGCCATG
NAAAACGGGAAACTCACCCATGTGCTCCCTTCTTCCAAGTGTCGGCTCCC
CTCCAGAATCTGCCTGCTTTTGTTTACTCTCCAGTGCCTTCAGGTNGTTG
TTGCTTATGTTGTTTTGTATTTCTTCCAGAGTTTATAGTTGTTATCTGTG
GGAGGATCNTGGTCCAGTAGGAGCTTACTCNGCCATACTAGAAGTGG
>rnd-5_family-1110#LTR/ERVL ( Recon Family Size = 35, Final Multiple Alignment Size = 33 )
GGCAGGTGGGGCAGGGACACTCCCGAGGAAAAGCAGGTGACCCGGTCTAA
TCTCCTTGTAATACATGCAACCTGGACCTCCNGGCAAATAGACTAATGAT
ATTTGCTAGGAGGAAGGATACCTTATCTATGGAATGCTCTTAGCAGGTGT
CCCTGGTTNAGGATTACTTATAGTAAATAAACCTAGAATCTGTGGATTTA
TGAGGCATGGCTCCCTGGAAAATGTCACGTAATCTGAAGTATAAAATGGA
GATGTTTCATAACTNAAACGCTCCCCTCTGTGTGAGTGGTAACCCGCANA
CCTCACTTAGAGACCTCATCTNTTATTCTGGGCCAGGAAGGTGCGTGTCC
GATGCGGGAAGGAAGGACCTGGGAAGCCNCTNAGCATNTCCTGGGCCCTG
TGTGTCCTTGAAATTATTAGTAAAGCTTGATACTGGGTAAGATCTCTGAT
TCGTGTGAGTCTGATTTGACAATCTTTTCTGT
>rnd-5_family-6451#LTR/ERV1 ( Recon Family Size = 36, Final Multiple Alignment Size = 33 )
TGACAATGTTGAACTTTACCTGAGCCCTGTGCTCCTGGAAAACAGCGACG
GTTAAGAAATCCCCCCANCCTTTTGTGTTCCGGGAAACGGCTTACTGCAA
AGAAC
>rnd-5_family-7829#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 32 )
TAAAAAAATACCCATATATTTAACCTTAAGGTTCTTACTTAGGTAAACAC
CTGAAATTCACAGGCTATAAAAATGGTTAACAGGGAAATAACTTTAAATG
ATGACTATCACAGTTTTCATAAATAATCTAGGTAAACTATTAAATAAAAT
AATTAGGTAAATGTAATGGGATAAATACTTGTAGACAAACTTGTCATAAT
TTAGAATCTAAAGTTATATTAAATAATAGATATTTCATTATTTGGGTATT
TTCCAATTAAAAATATATTGTAGGAAAACATTT
>rnd-5_family-4840#LTR/ERV1 ( Recon Family Size = 34, Final Multiple Alignment Size = 32 )
ATCCCTTACCATCCTCAGTCGTCGGGTAAAGTTGAACGGGCCCACGGCAT
CCTCAAGAATCATTTGGCCAAACTCGCCATAGAGGTAAAACTCTCCTGGC
CCACACTCCTACCTCTTGCTCTAGCCCGGATCCGAGCCACCCCATGGGAA
CCAACGGGTCTCAGCCCCTTCGAGTTGCTCTACGGTAGGCCTTTTCTAGT
TTCTCACAATCTCCCGGTACAACCGCCTCCTCTGGCTTCCTACCTTCCCT
ACCTCTCTCTCCTCCGCCACTTACTCAGGGAACACGCGGACCGCACNCTC
CCCGTAGTTCCGGGACCAGAGGACTCCCACCCGACTATACCTCTCCAGCC
AGGTGACAGCGTCCTCCTCCGGGAACTCAAGCCAGGGTCTCTGCAGCCCA
GGTGGTCGGGACCCCACATCGTTATCCTAACCACCCCGACTGCCGCCAAA
CTTTTAGGCCACACCCCTTGGTACCATGTGTCCCGCCTCAAGCTGGCTCC
CNAGAATGACCAGTGGAGGTCCGAACCCTTGGGCCCCACTCGCCTCCGCC
TCGCCCATGGCCCCTACCCGTCANCTCCTAACCCTTCAAATTCTCCTCCT
AACAATCCTTCTGGTATCCCCTCTTAAAGCCAACTCCTACTATGTCTGGT
GGTTCTACCTCCAGGAGTCCTGGACGGAAGGCCCCACCACTAAAACCCAA
TACCTTGCCCAAGCAGATTGCCAGCCCGCAGGCTGCCAATCAGCCATAAN
ATTTGAATTCCCGANATCTAAGTCCAANACTATCAGAAACTGCTGGACGG
ACATAACTTTGCCCTCTGCTTTCTATGTGACCAAACCAAAGACTNCTGCC
ATTCGAGGAACGANACCTATGGNGGATGCCCGTATGCTTNTTGCGTTATA
CACAGAANCTTCAGAACAAACACCTCCCCAGCAAGTAAAATGCTTTTCCT
CAACAACCAAGGTAAAGTGTCCCTTATCATCCATGATCCCTGGGACGCCC
GCTGGAAAGAGGGTACNGCAGGTAAAATATACACCTGGTTTCAAGACAGC
CACCCCAGCGGTACNTGGCTAATATTCCGGTCCTATACNCGNATCGTACC
CGTGGAAGTAGAACAACTCAACTCGTTAAGNAACNCCATCCTACAAAATG
AGGCTNCCTTAACTAACCAATTTAAGCCCTCGATCCAACCCAGGCCCTCA
GACAACGCCCCCCAGCCTTTCTCCTGGCTGGCTCTAGTACAGCAGGGGGC
CAACATGTTAAATTTAACCAAAGCCACGAATTTCACCAACTGCTTTTTAT
GTGCCTCCCTTAACAAACCCCCCTTAGCCGCAGTTCCCCTCCGGACCGGG
TTCAACCTGTCACAATCACCCACGGGGCCCGGCACCACCTTAACGGGTAT
CCCCTTGTTCAAAGTACACTCTCAAAATCTCTCTCTCTGCTATGGGACAG
CCAGCAGCTCCAGCCCCAGNTGCAACACCACGGTAGAAGTAAAATCCTCC
CTCTACGCGCCNCCAGGAGGATACTTCTGGTGTAATGGAACCCTAACCAA
AGTTATCGATACNTCCCTCCCCTTCCCCTGTGTGCCCGTCACCCTAGTCC
CGCAGTTAGAAGTGTACGGACAAGCCGAGTTCCTATCCCTCNTCGCACCG
TCCCCTAATCACCGGGGCAAACGAGCAGTCTTCCTCCCAATAGTNGTTGG
CCTCTCTCTAGCATCCTCTCTAGCGGCAGCCGGAATAGGGAGTGGCGCCC
TGGGCTACAGTGTCACCTCAGCCGCTCAACTAGAGGACAAGCTCCGCGTG
GCTATCGAAGCATCAGCCGCCTCTCTGGCCTCCCTCCAGCGACAAATCAC
GTCACTGGCCCAGGTAACTCTCCAGAACCGACGGGCCCTAGACCTGCTAA
CGGCAGAAAAAGGAGGTACCTGTCTGTTTCTCCAGGAGCAGTGCTGCTAT
TACATCAATGAAACAGGCCTTGTGGAAGAAAATGTCAACACTCTCTATCG
CCTCCAAGAGGACCTCCGCAAGAAGCAGAGCGCACCAGCCTCGCCTCTCA
ACTGGTGGCAATCCCCCATGCTTACCTGGCTAACCCCTATTATCACTCCC
ATTATCGTAGTTTGTCTTCTGCTAATGCTAGCCCCTTTTTTCCTCAGGTT
TTTACAGGCCCGCATAAGAGAAATTTCCAGGGTGGCCGTAAACCAGATGC
TACTTCACCCCTATGTCCGACTCCCAACCGAGGCACCGGCCAACTGACCC
CTCCCCCTCACTCCGCCCCTATTCAGCAGGAAGTAGCCAGAAAGAAGCGG
CGTCCTATATCATCAAAAGGGTTGG
>rnd-5_family-4369#LTR/ERVL ( Recon Family Size = 36, Final Multiple Alignment Size = 32 )
GTCCCCCAGTTCCCCCCGCCCCGTTCTTTCTNTGTCCTGACCGAGAATCA
CAGAGTGCCTTGACCGCTCTGTGACCCGGCCAGCTGCAGGTTTTTCCCNG
CAGGCTTGAACCCAAACCGGGGCCTTGAACATTCCCAGGCACTGATAAAG
GTGTTTAGGTTGTTGCCCAAAACACTGAAAGAAACTGGCCCCGGCCCTGA
GCCAAATTCCTTAAACCCTCATATAAACTCCATACCCTGACCCCCTCGCT
GCGGACATACCTAGGTAGAACACCCCTTTNCCCACGCTGCCATCTGCCTA
AGTTCCCCTAATAAATGCTTTGGACCGATCACCCTGGCGTTTAGTGCTTC
TTTCTTTGGAATCCCAACCGGCCCCATCTCGGGACGGTTTGGGGCACTCC
CTTGTGGGAACTCCCCTGCCGCCGCTTTTGGGGCGACTCCAGCCACTGGT
TC
>rnd-5_family-2917#LTR/ERV1 ( Recon Family Size = 35, Final Multiple Alignment Size = 32 )
CGGTTAAAATATGCCGCTCTGGCATTGACTATTTTAAGTTAAAGACACTT
GAAAAACAGCAGGTGCAAGAAGATCACTCTGACCTTCGTGCCGTTTCTTA
AAAGCAGGAGATGAAATTCCCATGTGAAAGATGCCCTCCCTATACTAGAA
GAGAAAGGCAACATTCTTATCNTCAAGGACGGGAAGTTGAGACCGAGAGA
ATTCTGTACAGACCTTGTTAAAATAACTATCTTTTTAAGCTTCCCACATA
ATTTAGTCGCATTTTCACAACTTACTACTCTTTGTCCAATTCAGTATGTA
AGTAACTGACTCTGCTTCTTTTGGTCTTTCTTTATGAGGGCTCCCATGCC
ACGTAAAACTTGTATTAATAAATTTGTTATGCTTTTCTCCTGTTAATCTA
TCTTATGTCAATTTAATTCTCAGGCCCAGCTGGGACCCTAAGAGGATGGG
AGGGAGTTTTTCCCCTCCCT
>rnd-5_family-1069#Unknown ( Recon Family Size = 35, Final Multiple Alignment Size = 32 )
CAATCCAATGCTGACACTACTATGCCAACTACTAGAATGCTGACACCCAC
TATGCCAGCTACCAAANGCTGATACCCACTATACCAGCTACCGAAAGCTG
ATACCCACTATACCAGCTACCAGAAGGCTGNTACCCACTATACCAGCCAC
CAGAAGGCTGGCACCCACTATGCCAGCCACCAGAAGCCTCAAGCGACGTC
TCGGTGAGGCTTGCCNGGTCAGAGTTGCAATGACTGCGTCAGTCCCCCGA
CTCAGGCCCTTCCCTTGAACTAGTTCCCAGATTCCAGACCAAACTTACCT
CCGGAGGCTTTTAGGACCCTGAAGAATTTCGGGTGAACGTCGGCCGGGTG
GTCGCTTATCCTCCACGGTGGCACTCTGGGGCCCTGGGACGNCTCAGGGG
GCGCCTCCCCTAGAGGCCCCCGAGGTGGGAGCGGCCGCCCGGGCGAGACT
CTGAGATGGCTTTTGTCTGGTGATGAAAAATAGAAAATCTCGGTG
>rnd-5_family-1216#LINE/L1 ( Recon Family Size = 34, Final Multiple Alignment Size = 32 )
ATTACGTACAACAACATNAATGAATCTCANGAACATAATGTTGAGTACAA
GTNNCGGACAAGAATACATACAGTATGATTCCATTTATATAAAGTTCAAA
AACANGCAAAACTAAACGATATATTGTTTAGGGATACATACATACGTGNT
AAGTATGAAGAAAAGCAAGGGAATGATAAACACAAAATTCAGGATGAGTG
GTTACCTCTGAGGGGGGAGGGAATGGGACGGGATCGGGGAGGGACACGCA
TCACAAGGTAACTGATGTTCTTTCTCCTTAAGCTGGGTGGTGGGTACACG
GGTGTTCGTTNTATTGTNATTCTTTATACTTTACATATATTTTATANATG
TATTATTTTATGCACTCGATATTAATTTAAAAAAAACTT
>rnd-5_family-2054#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 32 )
ATAAACAGGACCTAAGGCCATGCCAGGCAAGGGTTAAGTCACGCACCCCT
ACACTTAAAGAATAAACTATGTTCTAACTGCCACAAGGTTTTCTTTTTCT
CTAGCAGCTAAACAAGCACTGGCCTCGAGATAAGCAATATTAAACATCAN
CNCNTGCAGCTCCGCCAGACGCTGACTAACTGACCCCCACCCCTGTTCCA
CCAGCCATAACTACAGCTTTGATTGGACAAGAGACTGATTTCA
>rnd-5_family-1914#LTR/ERV1 ( Recon Family Size = 44, Final Multiple Alignment Size = 32 )
GCCCTTGGTCTGGAGAGCACATGNCACTTCCAGGTCCTCTCTGTCCTTGG
TNTGGAGCAGAGCACATGGTATTTCAAGGCCNACAGTGCCACCTAGTGGA
ATAGGAATCCTCTCCGTGAGGNACNTATTGGCCCTTTGCCAAAACACTCT
AGCTTCCCAATTCTTTTCCCTTTTGTGTTGCACCTCTCTACTAGAGACCA
GGCTCTATGCCGCTTCTGTGAACGGGAAAACTCTGCCTTCAACAGTTAGG
AGNAAAATGTCCTCCGNAGCCAAATTTTAGTCTCGATACTGTCCCATCAG
CAGGAAAACGGCCATTGGTCCCTACGTTCTCTTTAAGGCACCTATTCTGC
CTCCAACTAGAATGGCATCTAANTAGNAAGGGGATTTTAAGTTCGGAAGT
TAACCGGAACCATTNTCTAAGAGTAAATGCTTTAGTACGGGCCATAATAG
CAGGATATAGAGCTCAATCCAGCACACTCCCTCCATTAAGGAGAGGGCCT
TGCCCAAATGCAACTGTTACATAGTCTCTCCTGAGACCCATCCTTCGGGG
AGCCACGCAGGTCACACGAGTCTAGGAGGTCAAAGGGAAATTTCACAGGC
AGAGGACTAGGGCCGCNTGGGTGAGCGTGACTAGCCCCAATCGCTTAGTT
CCTCTGGTNCCATGGCTGGGGGTCACGCCTGCAACCATGGGTGGCACATT
CAACAAGGTGCCGGGACCCAGGAACCACGGAGGAAAAAACAGCGGAGGGG
ACGCCCCCACTGTCTTCTTCTTCACTCTGGGTCACACCAAAAGGAAGGAG
ACTAAAGGGACGCCTTTGTTCTCGCTTCTCTTTCTAGATGGGTCATTTTT
TGGCCTGCACTCCTCTGGAGTGCATTCTGAAGCACTGGGACTCCTTCGAC
CCTGAGACTTTGAAGAAAAAGTGGCTCATTTTCTTTTGCACAAGGGCATG
GCCTTTTTACTAGACCTTTGCAGGCGTTGCAAAATCAACCCAGNTCTTTT
AGCAATCATATCGGGCAGGCCCAGGGAGAATAATTCCCCAAAATTAGAAA
AGCAACTTCCAGGGGAACCATCTGAGNCCCCCCNTATCTCGGGCCCCTTC
AAGTTCCCTTCTCTGGNGCCACCTCCAACNATGCCACNAGCTCTTCCACC
TCCACCATCTTCAAAATTTCCCACTACCCCACNTTCACTCTCACCCCTGC
AGGAAATNCCCAATGNAGGCAATGCCAANTANGGTTCAAGTTCCCTTCTC
ATTGCAGGACCTTAGGCAAGTAAAGGGAGACTTAGGCCGATTTTCTGACG
ACCCTGATAGGTATATAGAAGCTTTCCAAAATTTAACTCAGGTATTTGAC
CTCTCACGGAGGGATGTTACGCTGCTCCTAAGCCAAACCCTAACTAACAG
GCAGCTCTGCGGGCAGCAGAGAATTTCGGAGATGAGCAATATGTCTCCTA
TAGCAGGCCAAAAGGGAAAAGAGAAAATAGGGAAGGCGAAGAAATAGGGG
AAACACCATTCCCAATAGGAAGAGAGGCAGTACCTCTTGACAACCCTAAT
TGGAACCCCCAGACTTTTCTATGGTGTTTTTCCTTCTTTCGCGGTTTAAA
ATGGCTCCTATCTTCTTTTATAATGTTCTTCCAACCTGGGAAAAGTTAAT
TTTCCAAACCTTAAAATGCTTGGCTTAGAGTTGAGCTAAGGGGAAGGGAA
CCCAGAAGCCTGACATGCCGGCAAAAGGGTAAAAATTTTTTACCAGTCGG
GCTTTTGGCTTCTCTCTCCCTGTGCAAACCGGTAAGAGGATAATAAGGAT
CATTGTTTATATTCTCTGTAAAGTTTTAATTAATGAAAAAGGATTTGTGA
GGTTGGTCTTAAGCTGTAGCCAATCTGGTGTGCTTTGTGTGTCTTTCT
>rnd-5_family-359#SINE/MIR ( Recon Family Size = 53, Final Multiple Alignment Size = 31 )
AGGCAGCATGGTATAGTAAAAAGAACATTGGGATGCAGACAGACTTGANT
TCGAACTCTGGTTACCGAGCTTTGGGCAAATTACTTAACCTCTCTGAGCC
TCAGTTTCCTCATCTGTAAAATGGGTT
>rnd-5_family-5310#LTR/ERVL ( Recon Family Size = 50, Final Multiple Alignment Size = 31 )
TTTTCCCACTGGAAATTTGGGTTACTAAAAGTTAAAGNCGTAGAAAAATA
AAGTGTGTTTTTGGTGAAGTTCATAAACACACAGGATGTAGTTTTCGCTA
AAGAAAATGTAATTTTTTTTTTTTTCTANTTTAGAGGCTATTTGAGGGTC
ACTTTAAAATAAAGGAAGAAAATTATACANNTAAAACTAAATGGATAAGG
AGAAATTTTTATTTTATTTATTTATTTTTCTGCTGTACCAGTACATAGAG
AAAGGATGAAAGGTGGGGGATGAGAACCTTTGATTCCCGGGTGGCCACGT
GGTCACCCATGGTATGGAGCTGCAGCTGTGCTGCATCAGTTACTAAAGGT
AAAAGTTACCAGTGGAATTTAGAGAATGGATCCAACTCCCAGGGAGTTGG
TTCACCGGATGCATAAGGAAATGCAAACTAATAAGGAAAAAGCGAAATAT
TCAATCCCTTGGTTATTGTTATCTATAATAGCTAAAATGAAAGTAAAAGA
GAGTGCTGGGTCGGGCCTTGANGCTGGACCAAGCTCAGATGTNGGTCTGT
CTGAGCTCAGGCCACTAGCCTCAAAGCTACCCACAAAGGGAAAAGTTANG
CCGGGGCAACAGAAAGTACCTCTGAGACCTGTGGTTACCAAGAAGGTAGT
CAACGTGGGGGAAGGGCAAAACCAAGTAACTATTGAAACCAGAGGGTATA
GTGTGAAGGAATCGTTCCATTTTGTAGATCGGTATCATCAGCTTCCTGAG
AAACCTTTACTAAAATGGATTGTGAGAGTAACTAATTTAGGGGCAGTATC
TTTGATTTTAAATGCTGCAGAGTGAAAGAGCGTGTTTGGGTTGATGCAGG
ACCCACAGCTCACTGTTGAACAATCGCAGATGGNTATACGTGATCCAGAC
NCACAGGAGGTTATTCCTGAGGGAACAGCCAGCCTGGTGGACTAGATAAA
AGCCACTGTAAAGTGTGTTTACCCTGAGAAGGGGGACTGCCCAACTCCCC
CTATAAAATGCCAAGTGGAGCACCCCAGANNAAGCAGCTGATATGCTTCA
TATGCAAGCCACGCGGGACTGGCTTTATGATGACCGGGATATTCNCCCAN
TGAATATGTCCTTACGCCCAGGTCATGGTAAATGCTGTGGTTAAGGGAGC
CCCTTTTACATGGGCACCCCATGTGACNTTACTNCTGCAAAATCAAACGA
CAGTTCGAGAAGCCTTATCAAATTTGCTGTCGCTTCCCCTCATGGGTCTT
ACAGATGCCAATAAAATAGAGTAATAAAAGAAAATGGGAAAGGCAAAAGA
GAGTCAAAGGACTCGTCCCAGAAGGGTGGAAATCTTTAGATGGTTATTAA
GAAATGAGATAAATAAAATGAAAATTGATGGGGCTAAAACGAAGGTCTTT
AAAATGCGGCACTATCAAAGGTTGAGTGGACCAANGGGAGCCCCGGCTAG
TCCCCCA
>rnd-5_family-877#LTR/ERV1 ( Recon Family Size = 34, Final Multiple Alignment Size = 31 )
AAGATTGGTCCCCTNTGTTAGAACAAGATTTTCTTAAGGTGTTGATTTAT
TCTTAATGAAATTACAAGAAGTTTTACTTTTATAATTCTATAATCTGTTT
CTTTTAAAACTTCTCAAGATTNATATCTCAGAAGTTCAACTTTTGCTGTG
CCTCGCTGCTTTCAGCTTTCTCTCTCCTAAAAGANGCCTGGGATAGATAA
CTCCTTCAACTTTTCGTCAGCTCCTGTAANTTTTTTTCTCCCTTCCGGTT
CTAACTGTTGTTGTGGCCTGATGCTGAAATGTTTTATCTTAAAGGTCTAN
AAAAGCAATGTTTTCCTCCAGTATAACTTGATTCTGTACTCTTGGCTTTT
TCNTNNTATGTCTAATTNATNTTCAATGTAATCAGGAAACTTCTCATGCT
GTTACTAGGTCATGTATTCCCCTGCTGTAACATTGAACACACTCTTCCTG
TGTCTGATTAAATTCAAGTACCTTTTTCATCAGGTTTGACTTCCAGGTTA
TCTAAATGGGCTTCCCATAAGGAGAAGCAGTCACACTGCAGAAGGTTTTT
CTTCGCCTTTTTGGTAACTGGCCTAAGAAACAAAGATTTTGCGTTTTATC
AAGATAATTTTCCTGATGTTGTCTTTATTAGGTTTTTGATTACTTAGGAA
AACTGAGCTTTAAAAGGGTTAAGGTTTTTACATCCATGTAACTTTC
>rnd-5_family-1411#LTR/ERVL-MaLR ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
GTAGGCAGAATTCTAAAGATGTCCCCCCACCCCCAAGATTCCCGTCCCCT
GGTTATTCAATCAAACACTAATCTAGGTACTGCTGTGAAGGGACTTTGCA
GACGTAATTAAGGTTACTAATCAGCTGACTTAAAATAAGGAGATTATCCT
GGATTATCTGAGTGTCAGTGTAGTGCAAGGTNAAGACTCTTTTAAAAGCA
GAAAAGTCAGAGAGGTTCAGAGAAAGAGATCTCTGAAGAGAAAGNNAGGG
AACAG
>rnd-5_family-8787#LTR/ERV1 ( Recon Family Size = 34, Final Multiple Alignment Size = 31 )
AAACTTTATAAAATTAATCAGGGAAGAAGGGAGGGGGAGAAACGAAAATA
AACCAAGCTTGCAGCACATTCAGCATTAATCATGAGGTCAGCTTGCTCTC
TGACCCGCTTCCTCGTAGTTGTTTGGTGCCTATTGCCCCAGAATCACGTA
GACCCTGTCACAAGATTATAGTTCCCCTTAACTGCTCTATAGATAACAAC
TTGAACATTATGAAACGTTAAGTTTTCCATTTGAGATATTCTTTCAGGTC
CTGCATACCGGTGAAACTACTGACATCAGCTGGTCTGAAGGACCC
>rnd-5_family-4160#DNA/hAT ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
TAAGGCAAAAGGAATTTTAAAATCTAATTCGTTAAAGGGATNGGNAAACC
CGGCTGNATTTTGGGTTCGTCGAACGTCTTGAGTTATTTTTCAAACGTTT
TGGGTTCGATAAAACCCAAAACGCATTTTGCCCAAGCACTTTTCCCCTTA
ATTTTNAAACCCGTGTGTATTTCANAGGGAAATNTAATCCGTATGTTTCT
GATTCATTTACACTTAACTCATCAAAATGTTTTTTTGTAAGAGCTATTTG
ATGTCTAAGAAGCCTTTTGAGNCTTTTTAATAAGCTTTTTAAGCCTCTTC
CCCTAGAAGCAGAAAATGCCACGTTTTGCCAAAGTAAACAAAGCTCCAAT
ACCAAAAGTTTGGGTTCAGTTCCAGACTCTCTGAACCGCAGAGTNTGAGA
TAGATTCTGCACT
>rnd-5_family-339#LTR/ERVL-MaLR ( Recon Family Size = 33, Final Multiple Alignment Size = 30 )
TAGAGACTGCTAGTTGCCTACCCAATATCCATTCTCCCTTTTTTCCCTAA
CAGAACCCTGATTTTATTTCGGGGCGGCAATGTGCCCAGCTAAAAATNTT
CATTTCCCAGCTTCCCA
>rnd-5_family-7609#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
CAACGTAAGAAGCCATGTTTGCTCATTTCTGCTTGCCAGCGTAATTTCAC
AAAGCCCCTGACTCTGTGACGACGTGCAGCTCTCCGGAAGGATGCTTTGA
AGACAAAACAGGATAGAGCACANGNCGCCCCCACACGTCTCTTGCCTGAG
TCACTGCATTCCTTAAAAGATAAGTGACCCTAGTCCTTGCCTTTTCCTAC
ACGTAAGATAACGTCTGACGGGGTTAGTGATTATGCCTCTGTAATCTATA
ACCAGATGTACTCTTACACCCAAACCTTGATGNGATTCTGCTTTAATGTA
ACTTCCGAGCAAGTTTGATGTGATTTTGCANGTACTGAACCCCCACCACC
TGTATATAAGCTGTGGGCTGAAACACTGCGCTGGAGCAGTCTGACAGAAC
CTCTCTGGGGCCGTAGGCCTCGGTCTATAGTCCTCAGTAAGACTTCTGAA
TAAAACTAACTTTAATTCTTTAAAAGCTTGATTTTTT
>rnd-5_family-615#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
ATTATTTTTTTTTTCTAGGAGACAAAGGGAAAAAGAATAAAAAATAATGA
AGCACGCCTACAAGATCTAGAAAAATAGCCTCAA
>rnd-5_family-7150#LTR/ERV1 ( Recon Family Size = 34, Final Multiple Alignment Size = 30 )
GTAACAGTGAAACAGCAAAAGAACTAACATAACTAACTCCATTTTTGTTT
AAGGGGCCTTTACCCATTCCTGCACGTAGGCNAGGATAATTTTAGAGCAC
TGAGATAANATGCAAAAACAGCAATCATGTAGTCCCTTTCTCAAAACTAA
CCCCGGGANANAAGGAGGAGTATGCACACAAGTAACAATGTTNTGTTAAA
GATTTATAGGAGCATTGTGACCTGACCAAGGACAAAGAAGTTTCCAACCT
CCTCGGACCCTCGCTGGCGCCCAGATGTCTGTGGTCATCCGGTCACCTCC
TGACCTCAACCCCCTCCTCTTCCCCCTTCCCCTAACATAAAAGGAGCCTG
AAATTCGTACTGNCTTAAGATGGTTCTTTAGGACACTAGTCCGCCATCTT
CTCGGTTTGCTGGCTCTCCGAATAAAGCCNGCTTTTCCTCGCNCCAACTC
CTTGTCTCTCAACTTATTGGCTNTCGNGCGGCGAGCAGCNATAGCTTGGG
TTCGGTTACAC
>rnd-5_family-5786#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 30 )
GTTAGTCCAAACTGCACCATTTTGTAAGCCCCCCGCCATTTCGCAGACCT
TGGTCAAAGTGAAACATTCCACGGGGGTTCGGGCCGTGAGAAACATCCTG
CCCAACCACCTGACCACAAGGCAAAGGCCCAACTAAAGAAACATCCCTAT
CATATCCTGCTGGGCAAAGGTCCAAGGAACACCCTATCACATCCCGCCGG
AACAAGGGCCGAACCGCCTCATCACGGGAACATCTTATCAACATCCTGCC
GGGCAGCAAGCCATACCGCCCAGACCCCTCCCGCCCANACCTGTAAGTAC
CCCAGCCTGTAAGCAGCGGTGGGCTCTGGCATTAAGCTGGTCCCCCACCT
CCGCAGGTTTTATGCTGGACATAAAGCCTGCGTTTGCTGTTGAGCGCCCT
CTCTCTGTGTGTGTCTTTCTTTAACCCTCGCCTTCCCTTCAAAACCTAA
>rnd-5_family-2112#DNA/hAT-Charlie ( Recon Family Size = 32, Final Multiple Alignment Size = 30 )
ACTCAAAGTGTGGTCCGCGGACCGGTGCCGGTCCGCGAACTGTTTATCAC
CGGTCCGCAACGAGTGATAAGTACAGAAATTGAGAGTAAGCATTTAGAAA
CTTTTATAGCAATTTGACATTGCCGCGACATCCAAGCGCGTGATCAGTGG
ACTCGTCTCATTGAACAGGGTATAGACCAGTTCGGGCGNNACTGGGCCAC
GCGTGGTGAGCTGCTTCTGGTCA
>rnd-5_family-1198#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 29 )
TAAGATTGGCCTTTTGAGATGTCTTTTCAGGTTTTTGCATNTCTGACGAC
ATGGCTCCACCTGGAC
>rnd-5_family-945#LINE/R2 ( Recon Family Size = 54, Final Multiple Alignment Size = 29 )
AAACTCATACTGGAGAGAAACCCTACAATGTGAAGAATGTGGCAAAGCCT
TTAACNAGTCCTCAAACCTTACTANACATAAGAGAATTCATACTGGAGAG
AAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAANNAGTCCTCANA
CCTTACTGAACATAAGAGAATTCATACTGGAGAGAAACCCTACGAATGTA
AAGAATGTGACAAAGCCTTTAATNAANNCTCANACCTTATTNAACATNAG
AGAATTCATACTGGAGAAAAATCCTACAAATGTAANGAATGTGGAAAAGC
CTTTAAGCAGTTGCTCAAACCTTATTNAACATCAGAGAATTTATACTGGA
GAAAAATCCTGCAAATGTAANAAATGTGGAAAAACTTTTAACTGAACTGC
AANTCTTGCTAAACACCAGAGTTCATACTAAAGAGAAAC
>rnd-5_family-1445#LTR/ERVL ( Recon Family Size = 30, Final Multiple Alignment Size = 29 )
GTGATATAATAAGAAATATATATTTGGTCTCTGCCCCCGGTTCCTGANAC
AGAGCTCCTAAAACCCTTGTAGATAGGGGTGCTAGGAGAATCTTTTGTTC
TAATATTTGGTCTTTGACCCTGGTTCCTGACACAGAGCTCCTAAGACCTT
TGTAATTTCCTGAGTGATAGG
>rnd-5_family-8866#LTR/ERVL ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
ATGGCACCCTTGACATAAGTAACTCCATCTTAGAAAAGACTCCATCTTAC
ATTTCANAGGGCACCNTGCCAACAGGGACNAGATGTTTCGCCTAATNAAT
AAATAAAAAGACTGCATCCAACCAGATAAGGACACAANCAAGCACACTCT
TCCACTATCAGTCCTCACCAGAGGACTCTGTGGCCATAAAAGAGCAGGAC
TTCACCAGCTCGAAACGGCCGTCTTAACAGACGCCGTCTTGCNGTCACTC
GTGATNAGCACCCCAGGCATCTGCCGCCGAAGGCTCTGCCACATCAAAGA
CTCTTCCTTGCAAGACCGATGGACCGCCCGGCCCAGACCAGGACTCCTTT
TGTCTNCNTCGCTCCCCTGGACTGGTTCGTTAACCCTTTTTCCTATCCCT
TTTTCTCTTGATGTTAAATGTTACTTTGTTTGTGTGGAATGTTTAATCTA
TAACATTTATATATTGATTAAGTATACTATTATGTATGGTTTGCAATACT
GACTGACTTGTGGAGTGGCTTGAGCCTGTGTGCCCGCGGCTCTGACTACC
GAGTGAACGGGAAGTACTAAGGAGAATTNCCTCCTTGGGAACTCCATGTA
GCTCGTGGCTTTTGTGATTGAAATAGCATCAATAAAAGCCTGACGTTGTG
GAAAGACACAAACGCGCGTGGACCTGGTTATCTCTGACCTTGCACCGCTC
A
>rnd-5_family-446#DNA/TcMar-Tigger ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
AGGCGCACGACACGCAGTTTATTCAGCGTCCCCAAGGGAAAAAAGACCCT
CCCAGCCCCCTTCAGCTGCGATATATCTTTTCCGCGCACGCCCAGATTCC
CCCACGCAAGCACGCCCACAAAGGGTAATAAAATGGCACGTGTGCAGGCC
GGACGCGCCAACGGCAGGTTCCCCACGATGCCCCGCATGGGGCCAAGACC
TACGTGCATTACTCACTGTGTTTTTTTGCTTATTCTCTGCTCTGTGGTGT
AAAGATATTGTTGAAAATGTCAAAAAGGCCTGCAGATACCCCTATGGGTA
ACAGTGATAAGAAAAAGAGGAAGCATTTATGTTTATCTATAGCACAGAAA
GTCAAGCTGTTGGAGAAACTGGACAGCGGTGTAAGTGTGAAACATCC
>rnd-5_family-805#DNA/hAT-Charlie ( Recon Family Size = 34, Final Multiple Alignment Size = 29 )
ATACATTTAAAGCGCGNGGTAAGATAAAANCATTTTATCACAAAAATTTA
TCGGCAAAAATGTATTNAAATTAATCATACATTTTTATTTCCTNAACCNT
TCGTGAGTATTAATTAAACAAGGTGCCTCTAAGTGAAAGAATAGCAGGTA
TAATTAATAGTCATTTGNTAAGTCTTGGTAAAGCCTTTCTGGATTATACT
TCCCAGGANCNAGAAAGTGAATGACTCTAATGACTGGGTAACAAACTAGG
TGGTTTCCAATTCTTTGCTTTCAACAAAATTGAAGGAGGACCTAATCGAG
TTGTCAGCTGATAGATCATTAAAAATAATTTTTGATGATAGATCACTATG
TGATTTTTGGCATATAACTCAGAGGAANTTCAAAGAATTGAGTGACATTG
CTATAACAAAATTTCTTTCCCATCTAATTTATGCAAACGAGNTTTCTCAG
NGCTAGTCTATAAAAACGAAAAATAGGAATAGAATTGATGCTGAACCCTG
TCTCATTCTAGCAATAAGTAATATTCATCCACGGATACGATAACTATTGG
AAAAAANAACCCTACCATCTCATTAAGAATGTATTTCCAAAAAAATTTAC
CTTTTATTTTTNATAATTATTANTTAAAGTAATACATGTTGTTTTGATCA
ATTGTGTACTAATAATAATTGTAATAANNACCAATCCAAANAAATTTTTA
AACCTTAAAAGCCTTGTAGTCACAGAAAATAACTTTTTAAAANGTTTAAT
TTATTTATATACATATTTTGGTTGCAGAGAAGTATGATCAGTAANGNATA
AAATNTAGCAAAATANATTACATTAGGAAAAAATTCTGTGGAATGGAAAT
ACAGTAGTAGAAGNAAAAATAANGATATAAAATTTTCAACTATTAGAGAA
GAGCTTATTCATTATTNTTTAATGGATGATGGTATTGGTATCAA
>rnd-5_family-16644#snRNA ( Recon Family Size = 30, Final Multiple Alignment Size = 29 )
CTGGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGC
TTATCCATTGCACTCCGGATGTGCTGACCCCTGCGATTTCCCCAAATGTG
GGAAACTCGACTGCATAATTTGTGGTAGTGGGGGACTGCGTTCGCGCTTT
CCCCTGGTAAAAA
>rnd-5_family-153#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 28 )
CATGTGAATGGGCTTAACTCACCTATTAAAAGAAAAAATTTTCAATTTGG
CTCACAAAGCAAGACCCAACTNTATGCTGTATACAAGAGACACACCTAAA
GCAAAGTGATTCAGAAAGGCTAAAAATAAAGGGATGGGCAAAGGTACACC
AGGCAAATGGAAACAATAAGAAAGCAAGAGTGGCGTGATATCAAATTCAA
GTCAAGCAAAAAGCATTAAACGAGACAAAGAAAACACTTTATAATGCTAA
AAGCCACAATTCACATTAAAANAGAACGCTATGTACATTATACTATGCAC
CAAATAGCATCAGCAAACACTTTCATAAAGCAAAAACTACAGGAGATACA
AAGAAAGTAGATAGAAACACACTAATAATAGGAGACTTTAATACACCACT
CTTNGTNCAAGACAGATCAAGTGGACAAAATAAAGTAAGGATATAGAAGA
CCTAAACAACACAGTTAATAAGGTAGATCCTACACGTATGTATAANTATA
TGTAGNGCTNCACNCTC
>rnd-5_family-732#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 28 )
AGTGACAGCTAAAAGTTGAAATGGTTGCCTCTGGGGAGATGGAAATGGGA
GGAAGGGAAGGGGAATTGCTGCTTTTCTTAATAAGCCTTGTAGAACTATT
TGACTCTTTAAACTATGTGCATGTATNACTTTGANNATTNAAAAATAAAA
TTC
>rnd-5_family-3552#DNA/hAT-Charlie ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
GCACTGGGGAGCGGCTGCAAATGCAGATTAACATTAGCAGAGAGGTTTGA
CTGCGCAGAGACCATAATAAATCAATTGCTTGCAGACTCATATCAAAACC
CTATCAGTGAGTGGCAAGTGACAAGCTGCATCTGGCGGCAGGCTTTATAG
TGGCAAGTGAGCTGATGTACTTCAGTTGCACAGCTGCATCTGGTGGCAGG
CTTTAAGTCAGAATCTGACACTTATTTTAGTCCGCGCGTGGCCCGCCCAT
TATTTTATTTACCACTTCCGTCCATGCCTCTTTCCCGCACTGCGCACTTG
TCTCAGTCACAGTTTTGGTAAGCCCACAAGCTAACCCTAGCCAAAATGAG
TAAAAAGCAAACGTCACTGGAGAGCTTCTTTGAAAAGAGGGAAAGACCCA
ATGATGAGACAGCAGAAGACTCTAAGACTGCCAACAAAAAGAAAGCTGCA
TTTAAAAGAGAATACCAAGAGTCCTACTTAAATTACGGGTTNATTGCAAC
AGGTGATTCACATTCTCCAAGCCCGCTTTGTATAATATGTGGCGACCAGC
TATCCAACGAAGCCACGAAAACCTTCAAAACTGCTTCGCCACATGGAGAC
CAAGCACCCTGCATTAAAAGACAAGCCTTTGGAGTTTTTCAAAAGAAAAA
AAAGTGAACATAAAGAACAGAAGCAATTATTGAAGGCCACCACTTCATCA
AATGTGTCTGCACTGAGAGCATCATTCTTAGTGGCTAACCGCATTGCTAA
AGCTAAGAAGCCCTTTACTATTGGTGAAGAGTTGATCCTGCCTGCTGCTA
AGGACATTTGTCGTGAACTTTTAGGAGAGGCTGCAGTTCAAAAGGTGGCA
CGTGTTCCTCTTTCGGCTAGCACCATAACTAGACGAATTGATGAAATAGC
AGAGGATATTGAGGCACAATTGTTAGAGATCGGATTAATGAGTCACCGTG
GTATTGACAACGAGGCAACAATGCTTGTTTTTGTGCGATATATTTTTCAG
GAGGATGTGCATGAGGATATGTTACGTGCGCTTTTGTTGCCAACCAACAC
CACAGCTGCAGAACTATTCAAGTCTTTGAATGATTACATATCAGGAAAAC
CGAATTGGTCATTTTGTGTCAGTATATGCACGGACGGAGCGGCTGCCATG
ACTGGACGGCTTTCTGGTTTCACTACTCGGGTCAAAGAGGTCGCTTCTGA
ATGTGAGTCTACGCACTGTGTCATCCATAGAGAAATGCTTGGCTAGCCGA
AAAATGTCACCTGAACTTAACGACGTTTTGCAGGATGTGATTAAAATTAT
CAGCCACATTAAAGTACATGCCCTTAACTCACGTCTGTTCGCGCAGCTCT
GTGAGGAGATGGACGCAGAGCACACACGTCTTCTCTTATACACGGAAGTG
AGATGGCTTTCTAAAGGTAGATCACTGGCCAGAGTTTTTGAGTTANGAGA
GCCACTCCAGAGATTTCTTTTAGAAAAACAGTCACCACTGGCAGCACATT
TCAGTGACACAGAATGGGTTGCAAAACTTGCTTACTTGTGTGACATATTC
AACCTGCTCAACGAACTCAATCTGTCACTTCAGGGGAGAACGACAACTGT
GTTCAAGTCGGCAGATAAAGTGGCTGCATTCAAAGCCAAACTGGAATTAC
GGGGGCGACGAGTGAACACTGGGATTTCTGACGTGTTTCAAACATTAGCA
GAGATTTTGAAAGAGACTGAGCCAGGGCCTTCTTTCTCCCAGCTGGTGCA
TGATCACCTATCTCAGCTTTCAAAAGAGTTTGAGCATTACTTCCCAACCA
CAGAAGACCCCCGAACTGGGAAGGAATGGATCCGCGACCCATTTGTGAAT
AAGCCAGGTGAATCGACTTTACCCTGCTAGAAGAGGATCAACTGCTTGAG
ATCGCAAATGACGGTGGCCTTAAAAGTATGTTTGAGACGACTTCAAATCT
CCATACGTTCTGGATTAAAGTCAAGGCGGAATATCCTGAGATTGCCACAA
AAGCACTGAAAAGCCTGCTTCCATTTCCAACATCCTATCTTTGTGAAGCA
GGGTTTTCTGCAGTGACAGCAACCAAAACGAGATTACGGAGTAGACTGGA
CATAAGCAACACAC
>rnd-5_family-4491#Unknown ( Recon Family Size = 32, Final Multiple Alignment Size = 28 )
TTAAAATAGCAACTCCACCTTTCCTCTTCTCCTCTCNTTTCCTTCTTCCT
TTTCCCCTTCCCTTCCTGAACAATTCAGTCCTAAAGCCATTAGGTGGGGC
AGAGCAAGGTAGGCGTCCGTCCAGCAGNGTGGGGGAGCCGCGGTGGCCCA
GAGCGGGGTGTCAGAGCCCAAGCAGAGTGAGGAAGGTGCGTGCAAGTGAG
AGACGGCCCGCACGGAGTGTCGGAGCCTAAGCAGGGNGAGGAGGGCGTCC
GCCNGAATGGGGCAGCCCGGTGTGGGGTGCCAGAGCCGAAGCGGGGTGAG
GAGGGCGTCCNTGCGGCAGCCTGTATGGGGTGTCGGAGCCCAGACGAAAG
GTGAGGGCACATCTTCAGAAGGTGNAAGAGTGTCATAATGCAGAATGTAC
ACGGGGTGTCAGCAGCGTGAAGANGGCATCCGTATGGGAGNGCGGCTTGG
CATGGGGTGTCGGAGCCCAGGCGAGGCGAGGAGGCATCGCATGAGAAAGA
TGGGCGGCAGGATGGGAAACTGGTTACATACGGGGAATTGATCAAATAAG
TAAAT
>rnd-5_family-201#DNA/hAT-Charlie ( Recon Family Size = 39, Final Multiple Alignment Size = 28 )
AGAGCAAGCTTTCTCAGACTGTNTCCTGATTAAGAATCACCTGGGATGCT
TGTTAAAAATACAGATTCCTGGGCCCCATCCCAGACNCACTGAATCAGGA
TCTCAGGGGAGAGGCCNNNGGAATCTGTATTTTAACAAAGCGCCCCAGGT
GATTCTCTATGATANCAGGCAAGTTTGGGAAACACTGCTCTTGGAAACCG
TTTCTGTTGGATCAGGACAGCCCTCTCTT
>rnd-5_family-4282#LINE/L2 ( Recon Family Size = 46, Final Multiple Alignment Size = 28 )
TCTGTTTCTCTGGTTCCCCTACAGGCCTNTGAGCTCCTTGAGGGCAGGAA
CCATTTCTTCATCTCTGCTTTCTCCANNTCTAGCCCAGTCCTGGCATACA
GNAGATGCTCAATAAATGTTTGTTGAATGAATAAATC
>rnd-5_family-564#LTR/ERVL-MaLR ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
TACGTTTTCTCTTCTCTTCTGCCGGNTGGATGGCGATGCCCACAGGAGAC
CTTGGAAGCCACATGTTGAAGATGGCAGAGCCTCCGTCAGCCTGGGTCCC
TGAATGACTGCGTGGAGCAGAGCACCTCTACCCAATACCAACTTCCCCTT
ACTCAGGNCCTATTGGACTTTACATGAGTGAGAAAT
>rnd-5_family-2034#DNA/hAT-Tip100 ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
TGCCCCGCTGTGCCAGGCGTTAACCCTTTAGTTGCTGGATCGTGGGGAGG
TCTCCGAGGGGTCCCAGAGGAAGGGCCGGGTAGCTGACAGTTGGGGAGCA
CGGAGGGCTCGGGGCAGCGGCTATTTACCAACCGGTACGGAAGTATTTCA
ATATTTTAACAACCGGAGCAATGTGTACCGGTGCATACCAGTTCT
>rnd-5_family-63#Unknown ( Recon Family Size = 31, Final Multiple Alignment Size = 27 )
CATNGACCCCGNTGGCANCTACCGCGGGCGACNNTGACCTGCAGCTGGAG
CGNATCAGCGTNTACTACAACGAGGCNTCNCGGTGGCAGGTACGTGCCCC
GCGCCGTCCTCGTGGATCTGGAGCCNGGCACCATGGACTCCGTCCGCTCT
GGGCCCTTCGGGCAGATCTTCAGGCCNGACAACTTCGTCTTCGGTCAGAG
TGGGGCCGGGAACAACTGGGCCAAGGGGCACTACACGGAGGGTGCGGAGC
TGGTGGACTCGGTGCTGGACGTCGTGCGGAAGGAGGCTGAGAGCTGTGAC
TGCCTGCAGGGCTTCCAGCTGACCCACTCCCTGGGCGGGGGGACTGGGTC
TGGGATGGGTACNCTNCTCATCAGCAAGATCCGGGAGGAGTACCCAGACA
GGATCATGAACACGTTCAGCGTGGTGCCCTCGCCCAAGGTGTCAGACACG
GTGGTGGAGCCCTACAACGCCACCCTCTCCGTCCACCAGCTCGTAGAGAA
CGCAGACGAGACCTACTGCATCGATAACGAAGCTCTCTATGACATCTGCT
TCAGNACCCTCAAGCTGGCCACGCCCACCTACGGNGACCTGAACCACCTG
GTGTCTGCCACCATGAGCGGGGTCACCACCTGCCTGCGCTTCCCGGGCCA
GCTCAATGCCGACCTGCGGAAGCTGGCCGTGAACATGGTTCCATTTCCCC
GCCTGCACTTCTTCATGCCCGGCTTCGCCCCGCTGACCAGCCGGGGCGGC
CAGCAGTACCGGGCCCTGACCGTGNCTGAGCTCACCCAGCAGATGTTCGA
TGCTAAGAATATGATGGCTGCCTGCGACCCCCGCCATGGCCGCTACCTAA
CGGTGGCCGCCGTTTTCAGAGGCCACATGTCCATGAGGGAGGTGGACGAG
CAAATGCTCAACATCCAGAACAAGAACAGCAGCTACTTTGCTGAGTGGNT
CCCCCACAATGTGAAAACGGCCGTCTGTGACATCCCACCCCGGGGGCTAA
AAATGTCGGCCACCTTCATCGGCAACAACACGGCCATCCAGGAGCTNTTC
AAGCGCATCTCCGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCCT
GCACTGGTACACGGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCCG
AGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGACGCC
ACGGCTGAGGAGGAGGAGTTTGAGGAGTGTGCTGGAGGAGGAGGTAGCCT
AGAAGCTTCCTTTTCTAGGTAAAGGGGGAAGCAGTGTGGATTCTTTAGTG
CGTTCTGATAGCCATTGTCACTCTGTTGCACTTCTTCGAGTCTTTACATC
TCCTCCTGCTGCATTTTAAAGCATTTTCATAGTGTGTAGTTTGGCCTAAT
AAAGCATTTTCATAGCAAAAAAAAA
>rnd-5_family-9682#Unknown ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TTTTTTTTTACAGTCCAGAGGTCTTTTTTTTTTTTTTAACACCTATTATG
CCATGAATTCATAGGGAATAGGTTCCAGCAGCTCAGGCTCCTTCCCATTG
GTTCTCACAAAGTGTGCTTCTCTGGGTGGAGCAGGCTGGCGCTTCAGTTG
AACCCAGGTACCTTTCTCTTTGGCTTCCTTCTTTTTCTGATCATTTTCCT
TCACGCGTTTCAGGAAGCTATCTCGGCTCTTAGAGTGCTTGATGTGCTCA
ATACGCACATTAATTCTCTTGGCAAGAATCTTGCCCTTAACTTGTTTGTT
TACAACAATGCCAACAGCATGCTGGGTAACACTGTAGACTCTTCCAGTTT
TGCCATGGTAACATTTGTGGGGCATTCCTTTTTGAACAGTACCCATTCCC
TTGATGTCTACAATATCACCTTTCTTATAGATTCGCATATACGTGGCCAA
AGGAACAACTCCATGTTTTCTAAAAGGCCTAGAGAACATGTATCGAGTGC
CTCTCCTCTTTCCCTTTGTGTTCGTCATTTTGGCGAATTACTGGAAGATG
GCGGTTCCGGCCGAAAG
>rnd-5_family-2283#LINE/L2 ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
TTATACGTATGACTCNCAAACACACGTCTCCAGCTCAGNCCTCTCTCCTG
AGCTTCAGACCTGCATGTCCAGCTGCCTNCTTGACATCTCCACCTGGATG
TCCCACAGGCATCTCAAACTCAGCATGTCCAAAACTGAACTCTTNCCCTT
TCCGCAGCCCTTTTANNCTCACTTCCCCGTTCTGTCGTCTCAGTGAATGG
CACCACCANTTACCCAAGCCAGAAGCCTGGGAGTCATTTTCGNCNTTCCC
TGTCTCTCCACCTCTCACAGCCAATTCATTACCAAGTCTTNTCAGGATCA
CCCCTCGAATCATTCTCCTNCTTCATCATTTCCTCAGTGCCTANTCTACT
GCANTAACTCNTTAATAGTATCTNCCTGCATGTCAACACCTTNCTTCAAT
ACATTCTTCANCCCGCAGCCAGAGGNATNNTTTCNAAATNCAGNTCTCAT
CCTNTGACNCTNCTGCCTTATGTCCTTCAGAAGCCTTTGATGNCTTCCCA
CTGCTCNTAGGATGGAGG
>rnd-5_family-1437#LTR/ERVL ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
AGTGAATTCTTATAATTTTATGTTGCCTCGGCATCCATTTTGAATATAAG
TTGGACTTTCTCATACGAGAAGCAGGGCTCAGTCACCCTTGACACGTTTC
CAGTTCTACGCCTCCTCCCAGTTCCTCAGCGTGGCCGATCCAGATATCTG
CCTTATACAACCGCCTCCTGGTGACCACCTCCCTATGGGACGGCTAGATA
CAACCTACTTGACTCGCCCTACTGACCCTCACACCCCGCATGGACTGCGC
AGANATGCCGCAGTGACCACCTCTCAGTCACAGCGTGACTCCACGGAACT
CGTGCCTGCTTGCTCTAAACCCACCAATTAGAACTCCCCGCGGGAAACCT
GCTCGGGTAACGCCCTGGACCCCAATAAAGGCTTCGGCCCACAGGTCTGT
CCTCCCTGCCCCTCTCTGCTCCCCACCCGCTGGTTGAGCGTGCGTGTCNT
GGACGGCTTCCCGCTTCCCACTAGCTCTTCGGAGGTGTGCCCTCTTCCTC
TCNNGGACCTGTAAGTAATGAACTGCTTCTGTTACTTCATGTGTTTTGTT
GAGTTGCCTCCTCTGCGTCTCACCTGACGTGCCACACCTGAACCTAACTT
CTCTCCTNGTCAGGGCTCTCCTAGAGAGTGGCTATCTTGGCAGGAATAAG
CCGGACACAGGTCAGACAAGAGNCACGAGGGCGTCTGCCAGTATAAACAG
GTTTCCTGNGAGAGGGACACCTGGTCGCGGGTCAGACACTTAGGCACTAG
GCCGTCCGCCAGGATAAAGAAGTATCCCGTGAAAGGCACATTGTAAACAC
CAGC
>rnd-5_family-7411#DNA/hAT-Charlie ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
TTAATGTGGCTACTAGAAAATTTAAAATTACATATGTGGCTTGCATTTGT
GGCTCGCATTATATTTCTATTGGACAGTGAT
>rnd-5_family-907#DNA/hAT-Charlie ( Recon Family Size = 31, Final Multiple Alignment Size = 27 )
ATCCATTGGAATGCGAGAAGAAAATATTAGAACTTCTATTTATATTTATT
TTTCAGTCTCATCCTTTTAAAATTTCTATTTTTGTGTATGTTTTATAATG
TACATAATATNTCAGTACAGTAGTACATGTATATAATTTATAAATAAATA
TACACATATTAGAGATGTGCCCGCTNAACATTAATTTTACTGATGGGAG
>rnd-5_family-9885#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TGTAAGGCCGGTTGCCTCGCCGGGAGGCCGGACACACCCACCTCTGCACT
CAGCACCCGACTCTGCACCCGGCACCAGGCTCTGCACTCGGCACCTAGCT
CTGCCGCATGGCTCCCCTGGAAGGCTCCGGCTGATGCAACCCTGGCCGGC
TCTCGCACCGGAAAACCCGCCCAACAACCCGCCAACCAATAGCGGCCCGC
CCCGTCCCAATCCCGCTCCCCTGGAGCCAATCAGAGCACCCAGCTGTTGC
TCGTTCCTCATA
>rnd-5_family-894#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 26 )
TCCCACCTGTTTNTCCNCTCTCCTCCGGTGTCAGCAGGGCCCAGCGGGGA
GCTGAGCTTCCGCCCCCACCCTGCAGCAAAACAGTAGNATGAGTCAGCCC
TCGACTTACTCCCTCCCGGTGTCAGCGGGGCCCAGCGGGGAGCCGAGCCT
NCACCCCCACCNGGAGGCAANNNGGCGATGCAAGTCAGTGCCCCCTTTCA
CCGGGGAGGTGTCAGCGGGGCCCAGCGGGGAGCTGAATTTCCACCCCACC
CATCCGCAACGAGGCGGCGCGAGTCAGCGTCTAGTCAGCATCGTCGGGAA
CCAGAGAGCAGCTGACCACATATNCACCNACNNAGCCCGCACNCTACACC
TCAGCAGGGCGACTGCCTACGAAAAAGAAGANTNAGTAGNATTCGGAGTC
TCATAATATAACGCCCGAAATGTCCAGGTTTCAATCGAAAATCACTCATT
ATACCAAGAACCAGNGAAATAATCTCAACTTGAATGAGAAAGNCAATAGA
TGCCAACACCGAGATGACANAGATGTTAGAATTATCTNACAAGGATTTTA
AAGCAGCCATCATAAAATGCTTCAACGAGCAATTACAAACATACTTGAAA
CAAATGAAAAAATAGNAANTCTCAACAAGGAAAC
>rnd-5_family-1101#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
AAGAGGGAAATTAAATAATAGCAATAATAGTAAAACAAAACCTTATAATT
TGTAGTTGCTATATAATAAAGTTTGCTGTGTTGTGTNCTGTTTAATATAA
AACCTAACCCCCAGCTCTGCTTAAAATTAACTAACTCCCTGTAAAACCTA
CCTTATCTATTCTCCCCACATTCTCAGCAAAGTTCCCAGGCATCTCAAGA
CTCCTGTTTTTCTTGCTGACCAGCTGCAAGGTCACAGGGCAAGATAACAC
CCAAAGAATGTACAATGCGTTTCTCAAAATGCTATTTTTCAAATGTAACG
TACATCACAAGACATGTTACAAATTAATTAACTGTTCTTTGTTCTGGCTT
CTGTAAACCTGTTAGCTGCTACGTCATCCTGGATGTATAAAAAGTACCCC
ATTTTCTTTCTCCTTTGCTCAGNCTTGGGATGCTAATCCGCTGAGCCGGT
GGCCACCTTAATAAAATCCTCCTGTTTCACCCATCGGTCTCTCCGGTCTC
CTGGATATTCTGCA
>rnd-5_family-142#LTR/ERVL ( Recon Family Size = 35, Final Multiple Alignment Size = 26 )
TAGGAAANACAGCATGCCAGNAGTGTATCTCCAGCAAGANTGACAGCTCC
AGCAATCCAGGGGCTANTCTTTGGCCTCCCAAGTGACAGCTCAGGTGCGA
GGGAACGAGACCACACGGGTAGGTGTCGGGAGCCGCCCTGGCTTAGAAGC
CCCATGCCCCAACAGGAACCAATATCTCTTGTAACAGTTCCATAGGCATA
GCTTCCAGGGTTCCTGCCACAAGGGACACGCCCAGTTACAAGAGTCACCA
TCACTCAGGGAAGCCCAAAGCTATGGCTTCCATCAGGTATTTATAGTTCA
TTCACAGTCCTCCCAGTCCAGATGCAGTTTACCAATCAGGGGTCATTTTT
ACCATAAGCAATGTTGCCTGGTAACACAGCTGACATTCCACCTTTATCAG
GTTTCCAGGGAAACAGAGCTAGAAAGTTAACCCAAGGTCAAATTCGTCCT
CAAAGAAAGGAGAAAGGGTTTTGTTAACCCTTTACTCACAGTAGTTTATA
GTTCCCCGCATAGTCTTTAAGCACCTCCATTTCTNTATTTTTCTGAGGCC
CAACAGGCAGGGGTGAAGCCTGTGATTGGGCAGGTTATAGATACCACAAA
AGAGGTCAACAAGNTGGACGAGTTGTGGCTGAAATCCAACTCTAGCATAG
CGCTGTTAATTGGGGAANANAGATAACTTTTTAAATCTTTATTTACTTGT
TTATAAATTTCAAATAGTAAAATTGCTTTTTTCCCCTTTGGTGTATAGTC
AGATTAATTCGAACACAT
>rnd-5_family-3#DNA/hAT-Tip100 ( Recon Family Size = 32, Final Multiple Alignment Size = 26 )
CTTACAAATAATTAAATTTAAAGATTGTCGCATTTGGCGGAAAAGANCGC
TATTTTCNTATGAAGCTTCGGATGAACCGATTATTAACGAAAGATAACTT
TTAAATTAATTTTTCCTTGTNATTGAAGATACAGCGATAGAATGCATAAA
CAGGCATTTTGAATTACATACAAATCGTGAAGCCACTTTCGGTTTCTTGT
ATGACCTCCACAAGTTACAGGAAATGTCAGAGAAAATATTAAAATGCCAT
TGTATAAATTTACATTTAAAATTAAATTCAGACTTACACGAAACTGATTT
GTATGAAGAGTTAAATCTTTTTAGAAAAATTGTTCCACGAGAATCATCAG
CTCTAGATGTACTAAAATTTATATTTTGAAATAATTTATCAGAAATNTAT
CCCAATGTTGTCACAGCCTATAAAAATACTCTTAACAGCTCCAATAACAG
TTGCATCCGCAGAAAGATCCTTCTCAAAATTAAAAATTATCAAAANTTTA
TTTGCAATCTCGCATTTGCCAAGAGCGACTGATGTCGCTTTCAATTTATA
TCGATTGAAAATGAAGTTGCTAAAAGTATAAATTTTGATGACCTAATAAA
TGAATTTGCAGAAAAGCGAGCCAGAAAAATCTTATGATCAATCAAGATAT
CACATTAATAAAGTATTATTATATTACATAAAATTATGACACCCGTATAA
AATTATGAACAAATATTANTTTTTGCAATTTGTAAGTTTATGTTNTTACT
CATGTATCACTATTACCCCTATTACGTTTTATAAGTAATAAAATATT
>rnd-5_family-2358#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 26 )
GGTAACCGTGGAGGGATCCTGAGTGGAGGTGNCCCTGACCTNCGGCAATC
TCCTATCGGTGCTTGGCACCAGCTTGAGCTATCTTTATGGCTCAAACCGA
NAGAACAATTTGCTGAGGCCTGGGANCTCCTCCCTNCAGAGAATCCCTGA
TCTCCCGAAATTTGGTTGAGATCTAAGGTTTATTTGCTGTTAAGAANAAC
TCCTTTTTTTTTTGGAGTTTCNACTTGCTTCCAACAAGGAAGGCGAGCTT
GGCTTTTTCCTGCTTCCANGATGGTGGAGAGCAGTCTNCAGCCTGAGNCC
CATCACTAGGTAAGGAGCTGGTTTGGGATTCTGTCTTGCAAATTCCTTTT
AATGACTAAAGTTAGCATTAACAACCAGCTGGTGTTAATTTCTGCTTACA
CTTAGAGCGCTCAGAAATGTATAATTTGTGTGATCGTTGTTCGTTTTGCT
GGTTTTGTTTGTTTGTTTCTGTCTTGTTCGTTTTTTCTTTTGTATGTTTC
CGTCCTTCCCTTATGAGATTTGACCAACTCTAATCCCCTCTANTCCTACC
GTNTATGAGTGTGGAATTTTCCACTCCAAAGANGCAAAAGCACCATGCTC
CCCCCAGCCTTTCGGGGCATTCTCAGGCAACTGAGAATCTCATGAGGGTG
TCTGGGAGAAACGCTCCCTAAGACGTGCAGCGGCTCTGAGTACGTTTCCC
CCTCGGAAGAACATACTTAGGGTCTNATCTCAGCTCGTGCGAGCAGGTGC
ATATAAGGACTAGCNCGACCCTTCGNCNCTTGAGCCCCTGACACANTGTG
CCAGGTAGCCACGACACAGGTGGACCAAACCGGTTCAGGAAGTAACGGCC
TTGAAAAGCTAGGTCCACAAGCAGCACACTTTGGGTCCGACACACGCCCC
GACTTGGTCAAATCCGAAGAGNAACTCTAAATTATGGGGAACAAGGCCTC
TAAGTTGGCTAAAACCCCCGCAGCTGCGGAACACAAAGTTCCACCTTTAG
AAACTCCGGCCGGGTNTATGCAAAACACTTATGGTGAATCGTCATGCAAA
TATTTAACCAAGTGGACCACTATAACCAAAGCAGATTCTAANTTACAATG
GCCTAGATGGAGATCTTTTGAGATGCCCAAATTAGCGTACCTGTGAACCA
GGATGGAAAACACAGGCACAAAAACTAAACAANCAGAATGGGAGAGCTA
>rnd-5_family-107#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
CAGCATACACGTGCTCTCCCTGCCAGCCGTATCCAGTTAATTTCCCAAAC
CCCAACCCCATCCACTAAACAGCAGCTTCTCTCCTTCCTAGGCGTTGTAG
GATACTTTCGCCTCTGGATACCAGGTTTTGCCCTCCTAACCAAACCACTT
TATAAACTTACGAAAGGAAACTTAGCTGACCCCATAGACCAAAAATCCTT
CCCCCATTCTTCCTTCCGTTCTCTAAAAAAGGCCTTAGAGACTGCTCCTA
CTCTAGCACTCCCCAACTCCTCTCAACCCTTCTCCCTCTACACAGCAGAA
ATAAAAGGCTGCGCCGTCGGAATTCTTACACAGGAGCCAGGCCCACGGCC
TGTCGCCTTCTTATCCAAACAACTTGACCTCACNGTCCTAGGCTGGCCCT
CATGCCTACGCGCCGCAGCNGCCGCCGCCCTGATACTCCTAGAATCCCTC
AAAATCACAGGCTATGCCCCACTTACCCTCTATAGCTCTCACAACCTCCA
ANGTTTAGTTTCCTCTTCGCACCTCACACACNTACTTTCNGCCCCNCGCC
TTNTCCAGCTCTATTCGCTCTTTATTGAAACCCCCACNGTGACCACTGCN
CNCGGTCCTGACTTCAACCCAGCCTCTCACCTAATACCNAACACAGGCCC
CGAACCCCACGACTGTATCTCCCTAATCCACATAGCGTCCTCCCCATTTC
CCCATATTTCTCTTTTTCCTATTCCAGACCCAGACCACGCATGGTTTATT
GATGGCAGTTCTTCAAAGCCCAGTCGGTTGGCACTGGCCAAAGCTGGCTA
TGCTGTTGTATCCCACTCATCTATTATTGAGGCTGCCACACTCCCCTCCT
CCACCCACTTCTCAGCAAGCTGAACTGATTGCCTTAACCCGTGCTCTTAC
TCTTGCCAAAGGACTACATGTTAATATCTATACTGACTCTAAATACGCCT
TCCACATCCTACGCCACCGTGCTGCCATATGGGCAGAAAGAGGTTTTCTC
ACCACGCAGGGATCCTCTATTATCAATGCCCCCTTAATAAAGGCCCTCCT
TAAGGCCGCTCTCCTCCCAGCCAAGGCCGGAGTTATCCACTGCAGAGGAC
ACCAAAAACCGTCAGATTCTATTGCCCAAGGAAATGCCTTNGNCGACGAA
ACAGCCAAAGAAGCAGCGAACGCNCCAGTATCNCCCCCACCGAGGCCAGT
ATTTTTCCTTCTCATCTATCNCTCCTACCTACTCTCCCTCCGAAANCTTA
NCTTACCAGTCACTTCCTACNCAAGGCAANTGGTTCTTAGACCACGGAAA
GTTCCTTCTCCCTGCCTCACAAGCCCACTCTATCCTCTCATCCTTCCATA
ACCATTTCCACGTAGAATACAAGCCCCTGGCCCATCTTTTAGAACCCCTT
ATTTCTTTTCCATCATGGAAGTCCATCCTCAAAACAATCACATCTCAGTG
TTCATCTGTCACTCTACCACTCCCCAGGGCTTTCTCAAACCCCTCCCTTT
CCCTACACATCAGNCCCGAGAATTTTCCCCTACGCGAGATTGGCAAATAA
ACTTCAAGTTTTGCCTAGGTAGGCATTTACCCTGTCTCTCACTCCACCCT
TGGCTGCCCTCCCCTTGTTCATCAGACTCTCCTCCAGACCCCTCTACCTG
CCTGCTCATACCTAGCCTTGTTAATAAAAGTGAGTGGTTACTTACAGATA
CCACACGCTTCCTCATACACCATGAAAACAAAAGCTCTCCCTCCACACAG
TTACCCTACCAAACCCCGCTACAACCTTTAACAGCCGCAGCCCTTGCTGG
TTCCCTTGGCGTCTGGGTCCAAAGCCCCAGCCCCTCAGAACACTTTCTCA
CCTTTTCAGTTTACACTTCCAGTTCTGTCTAAGCCAAGGACTTTTCTTCC
TCTGTGGCTCTTCTNCTTACATCTGCCTTCCTACCAACTGGACAGGCACT
TGTACCCTAGTTTTCCTTACTCCCAAAATTCAGTTTGCCAACGGAGNCGA
AAGCCTCCCTGTTCCCCTTGTGGTCCTNACACGACACAAGCGGGTCATTC
CATTGATCCCCTTACTTGTAGGGTTAGGGATTACTACTGCACTCGGCACA
GGCATAGCAGGCCTTACCACTTCAATCGTCACCTTCCGTAGCCTCTCTAA
TGATTTCTCTGCTAGCATTGCAGAATTAACTCAATCACTGTCCCTTCTTC
AAGCTCAAGTAAATTCCCTAGCTGCAGTTGTCCTCCAAAACCGCAGAGGT
CTTGATTTACTGACTGCTGAAAAAGGAGGTCTTTGCCTATTCCTAAATGA
AGAATGTTGTTTTTATGTAAACCAGTCCGGCCTCGTATATGATGCCATCA
ATAGATTAAAAGACAGAGCCCAAAAGCTCGCTAATCAGGCAAATGGTTAT
TCTGGACCTGGCTGGACTGGCTGGACACTCTCTAACTGGGTGTCATGGCT
TCTTCCAATCCTTAGTCCTCTGATACCTATCTTTCTCCTTCTCTTATTTG
GACCCTGTGTTTTCCGATTAATCTCTCAATTCCTACAAAATCGTATACAA
GCGATAACCAATCAGTCAATACGACAAATGCTCCTTCTAACAACCCCACA
ATATCACCCCTTGCCCCGAGATCTCCCAGCAGTCTAAATTCTTTCCCATT
TTTAGGTTTCCGCGCCGCCCCCAATCCCGCTCGAAGAAGCCCTGAGAAAC
GTCGCCCCATCACCCCTCTGTGCCGGCCTTCCTAATATTCCACTGCCCTC
CACTCTTCATTTCTTTTTCCTTTATATTACTAATATAAAAAGACAGGAAT

>rnd-5_family-12386#LTR/ERV1 ( Recon Family Size = 30, Final Multiple Alignment Size = 25 )
CCCCAGACCAATCTGGTTCAACTTTTATGTAACAAAGTTGTGAGTTGTTT
TTCAGTTGCCATGGACCCCAGGTTGAAGGTCACGTAACCTGAGCATGCCC
AGATGAACCAAGCGTGCAACCACGGGNGGAACCTAAGTGCTCGGACCGAG
GAGCGGAGGACTGAATTAAGAAGCGGACACCACATGGCAGGATCCAGGAT
CCAATCAGATCGAGCCCTGGCATCACCCCATGGCAGGATCCAGTCAGATC
ACGCCTCCCGGCATCACCTCATTGCAAGATCCAATCAGATCACGCCTCAT
TACCCTATGCCTATAAAACCTGNCCCAGCCCCCAGCTCGGGGAGACACTG
CTTTGGGAGCTNTCCCCGGTGTTCTCCTTACTTGTTACAAGTAATAAAAT
CCCCTTGCTAAATCCTCCTTGGTTGTGGTCATCGGGTTGACACCCGCCAA
GCGACCGAACCCACCCGTTGT
>rnd-5_family-4317#DNA/TcMar-Tc2 ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
CACAACATAGTTGTCATTGCCTGCGCGCGTGACGTATGCAANTTGGTCAT
AGCTGTTCATATTGTCACTTCAATTGAGTTATGTGCATTGTTGGTACNAC
ACGTGTTGAGTTTAATTGCCGTTTAAAATGTCTTCAAAANATTACACTAT
GATTCGGCACTGAAACGAAAAGTTATCGTGTATGCAGAAAGGCACGGAAA
CAGAGCAGTACTANATTTGATATTAGTGAAGCAAATATTCGTTATTGGAG
GAATGACNCGCAATTCCATATTTTCTTGCAAAGCAACAACCANGTGCTTT
ATGGGACCTAAGAAAGGAAGATACCCACAAGTAGATGAAGCTGTGTTACG
TTTTGCTACTGAGATATAAGCAAAAGAAGATTGCCTGCCATANNACCANG
CAACGTACGAGGGCAGGAGAAACTGCCAAATCCTTCAGAATAGATGAAAG
AAATTTCAAAGCAATGAGAGGCTGGCGTGACCGATTCATGCGTTGTGCAG
GACTATCTTAGGATATACAGCATCAATTTGTTAGAAACACCTGCTATTNA
ACAGAATACACTTAACTTCCAGCAGGATNCAAGTGAGGAAAAATGACAAT
ATGTGTTAGTCAAAGAGGNAATGCTCTANATGAGTGAGCTCTGGTNCNCC
TCGGCACGCGTNAAAANTATGCNNCGAATNCNANATGATCTCCAAGGAGG
CCAAGATCAT
>rnd-5_family-6138#Unknown ( Recon Family Size = 35, Final Multiple Alignment Size = 25 )
GATCTCTCTTTCGATTGTACTCTACTTGCTGTAACACCCAAGAATGCAGA
GCCAGGTTGATCCGACCTAGAATCTGCACATAAGGTCTGGCCTCTGCCTG
GGATTCACAAGACAAGGTAGGTTTTGGATNGAGAATGTACAGAAAACTAA
GAGGAGGCATTTTCTGCATTGCAAGATGTCAACACAGACATCTTAAACTT
ACCCTTTGAGAGTGTGGCTCTTTGAGCTTTTCAGGTCTTGTCCAGTGACC
TGCTGCAGTTCTGTGAGAGGCTCCGGGTGTAAATAGAATCTGATGGCAGA
ATCTGTAAGTGTAAANAANCATCTTAGGAGTGAGAGATCAAGGCCACGAA
GTATCCAGAGCCATGACCACAACTACACCTACGCGTAAAATGTGATGCTG
GAGTATTCTTGTCCTTCCTCGTTACCCAAGAGCTAGCTAATCAGGACAGG
TGATCCAGGTTCTGGAGCTCCACCAGGGCAGTTCTATTTTCTTATTTAGC
CCGAGTCAGCTGANTCTCTCCTGCCTGGCTTATCATTGGGCCACCAGCNC
NGGGTCACCGGGAACCCTCTCACAATCACCTAGGCATCTTTGAGACATTT
GAGAATGTCCAGAGCAGAATTNTGTCAGGCTGACAAGAGTGGTTAATTCT
GCTTCTGTCTCAGTCTAAGAGAAATGACTCATTCTGTGTTTGTTCCTCCC
CTCACACAAGAGATGTCTTTGGTTGGTACCCAGATGAGAGTTTCTCCAGT
TTCCTNGTACTTGGGTGAAAAGCAANGAGGAGGTCTGGAGACTCAGACAG
ATAAACCAATTGCTTCCATTTCATACGGCCATTAGAAAAACAGATGAAGC
AGTCATGGTCCCTACCATCCAGGAACTTTTAGTCTAGACTAGCAACTGGA
TACATGGTTGAATTAAGCATCATATGGTTGGTACAATGAATAGATGTGTG
CAAAAAAACTTAGCTTTTATTTGGGCCACTTTCTTTATGTTGTGATTTCT
GATGTTATCACCTGAAGGGATATTTATGGACGGAAGAGTTATTATTCGTT
CTTTTTACCTTGCCAGGAATACATATTTATCTTCTAATAAAATTATCCTA
GAAAACTTTAAGAGATTTGTTTAAATTGCTTATTAGTATATGTTATAAAA
TTGACAAAGCAGTGGCTAAAAAAGATTAAAGTTACACAAACTCTGAAATT
TAAGTTTNTCTTAGGTAAGCTTAGGAAAAACAGAACTGGAAATACCCCAG
TGGCATAGAGAACAGAATTCTACATAGGNTNCACTCCCTGCCCCAGTCCT
GTTCAGATTCACCCTTTTTGGAGGCCTTATTTAGGTCTGGCCCCACCCTG
GAGTCTTGCCTCACANAACTGATTAGAAGAGATCAGAGTTTTGGNTGGTG
AATCCTGTTGCCTTTCTAGAGCTGGTGCTCGNAATTTTTTGAAACCCAAA
AAAGCAGATAAATGGGAAANATAAAGTATGTATTNCAGGGTCTTAACTTG
T
>rnd-5_family-1298#Unknown ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
CCTGACCCTGATCTGGTCCTGCCATACCTGGCAATGTCGAACCTGGCGAT
GTCTGGGCTCTGCCCTTCGCAGGACCTTTNCCTTGTGCTATCCTAGTCCT
GCCTCAGCCATGGCCTTTTCCCTGGCCCTGCCCACCAGTTGCCTTCACCT
TTCCGTGGCCCTGACTTTTTCTTGGCCATTCTCTGCCCTTGCCCTTNTCC
TGGCCCCTTTCTGGCCCTGACTGGTGGGTCCTGTCCTGTCCATTTCCCAA
CCCTGGCATTCCCTGTCCCTGCCCTGCCATCCCCGGGCACTCTCTTTGCT
TTATACTGACTTTGCATTCTCTTGTCTCTGCACTACCCTAGTTCTGCCCT
GTCCTGACCCTCGATTCATCCTCGCCTTATCCTGTGCCAAGCCCTGTTGG
TACTGCCATGTTCCTGCCTTNGCCCTGTCCTAGTCCTGCCCTGGTCCTAN
CCTTGCCCTGGAACCTGGCCCTGGCCCTGCCCTTNCCCTNNCNNTCTTTC
CCCTCANNCTCTGACCATGACCATGGNCCTGGCCCCCTCCCTGGCCCCCG
CTGNCCTGNTCTTGNCCCTGGCACANTGCTTTCGGCCCTGGCCCCGGCCC
TGGCATGCCCTACCTGCCCTGGCCATGTCCTGGCCCGATCTGCCCCTGCC
GTGGCCCTGNCCATGCCCTNGCCCTGACTCTTCCTGGCAGCGCCCTGACC
CTGCCCGNCCCTCTGCCCTGGCCCTGCCCCTGCCCTGGCCCTGACCCTGC
ACTGNCCTGGCCTANCNCTGCCNCCGCCCTGGCCTTCCTTGCCTGGGCCC
TTTGCTCCTACCCTGGTCCTCTTNCCTGGTCCTGGCCCCGGCCCTGCCCA
GNCGTGCCTCCCTGGCCCTGGCNCTGACCCTGCCCTGGCCCTGGCCTGGC
CCCTAAGGCCTGTGCCTTATCCTGGCCCTGCCTTGGCCCTGGCCCTGCTC
GGCATTCCTGNGCCTGCTCTGTNCTGGTNCTGNCTCGTCTGGCCCTTGCC
CCGACTCACCGCGGCCCTACCCCGCCTGGGTTCTGCACGGCCCTCCCTGC
CCTGGCCCTGCCGTACCCGGTCNTGCCNTGGCCCTGNCTTGATTGACCCT
NCGGGTCTCTTNGCCCTGTCCCTGGCCTGCCCTAGCCTTTTCCTGGNCCT
GTCCCGACTCTGTCTTGGCCCTGGCCCTGCCCTNCTCTGGTCAGGCTCTG
GCCCTGCCCTGGCCCTGCCCTGNATGCTTNCCCTGCCTTTCCAGGTCCTG
ACCCTGTCCCTGGACCCCGGCCCTGCCCTGGCCCTNCCCTGNCCTCCATG
CCCTGGCCCTGCCCTCACCCTGACATGGCCCTGCACCGGCNCTCGCCTGC
CTTGGCCCTGCCCTGGCCCTGGCCCTACCTTCTCCCTTGCCCTGGCCTTG
CACTCTCGTCCTCTGCCCTGGACCTGTNTGTCCCCGCCATACCCTGGCCC
AGTTTCCCCTTGTTCCCTAGTCGTGCCCCTGGTATGACCCCTGCCCTGCT
GTTNGCCATGCCCTNTGCTACCCTAGCCCTGCCCTGCGGCTGGCCCTANC
CNGNCCTGGCCCNACTCTCCCTGGNTCAGCTCTGCGCTGGCTCCTGGCCC
TGCCTTGCCTTGCCCTGTCCTCGCCTGGACCTTCCCTGNTCNTACCCTGA
CTCGCTTGGCCCTGNCTCTGGNCCTACCGTGGCCCTGGCCCTGCCCTAGN
CCTGCCACATGCCCCTGACCCTGACCTGGCCCTGTCCTACCCTGGCCCTT
CCTTGGCCCTGTGCTACCCTGGCCCGGCCCCAGCACGCATNGCCTCTTCC
CTGGACCTGGNCTAGGCCGTGCCTTCCATCCTTCCTGGTCCTGCTCTTTG
TCCCGNCCTTGGTCCTGCTGAACGTCCCCTGGCCTTGTGGCCATGGCACT
GGCCCCGTTCCGGCCNTGACCCGGCCNTGGACCTGTGCCATGGCCCTGGC
CCTTCCCTGCCCTGGCCCTGCCCTTGCCCTGGCCCCGCCCTGGCTCTGCC
TGCCCTGCCCTNNCCCGGACCTGGCCCTGGTTGNCCTGGTCNTGATACTC
TGGCCTGCCCTTCCCTGGCCCTGCCCTGGCCCTGGTCCCGTCCTTGTCCT
GCCCTGACCCTGCTNNCCTGCTCTTANTCCTGGCAGACCTTCTCTGTGCN
TTTCTGGCCCTGGCCCTGACCNTGCCCTGGTCTGCCCTGTNTTGTCGTAT
GCGACCCTGGCCCTGTTCCTGCCCTGTCCNGGCCCTGCCGCACTCTGGCC
CTGCCCTGGTCCCTGGTCCTNCTCTGGCAAGTCCTGACTCGNCCTGCCCT
NCCTNGCCCTGCCCTGGTTCTGCCCTGGTCGCNTCGNCCTAACCTGGATC
CTCCCTGNCCTCCACTCTTCCCTACCCTGGTCCTGTCCCTGTCCTNANCC
CCTGACCCTGCCCTTGTCCCTTACCCTGGCCTTGCACTGCCTGGCCATGC
TCTGGACCTGGCCCCGGCCCGGNCCTGTCCCTGGTCCTATACCTTGTCCT
GGCACTNCCCTGGACCTGCCCTGTCATGAACTGGACTTGGAGGTATCCTG
GGCCTGAACTGACCTGGTTCGGCCTTTGGATTCCCCGCCCTGGCCCTACC
ATCATCCTGCCCTGTTCCTNGCCCTGTCTTGGCCCTGAAATGGCCCTGCA
ACGGCCCAGTTACGCCATNNCCTGCCCTGCACTGTCCCTGGNCCTTCCCT
GGTCATGGACAAAGCTGATCCTGNCCTGTTTATGCNATAGNCCTGACCCT
GNCCCGGCCCTGCCATACCCTGGTGGCAATGTACGAACCTGGCGATGCCT
ANACGTCCTGTCCTGTCCCTGCCCTTCGCTGTCCATGGACCTTCGTCCTT
GCGCCACCCTGGTCCTGCCTCCCAGCCNTGGCCCTTTCCCCGACCCTGGC
CCTGGCCCCAGTTGCCTTCACCTTTCCGTGGCCCTGACCCTGTTATGGAC
CTGACCTGA
>rnd-5_family-2158#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 25 )
CACAAAAAATTCCATATGGGGTTAAAANAANCTTGACTCAAGTAATCATA
CCATAACAAAAATCAANTCCAGATGGATTGTANACCTAAATGTGAAAGGC
AAAATAATGAAACTTTTAGAAGACAGTAGAAGAATATCTTCATGACTTNG
GGATAGGAAAAGATTTCTTAAACAGGACACAAAAAGCACTAACCATAAAG
GAAAAGATTGATAAATTCGACTACATTAAAAACTTCCGTTCATCAAAAGA
GA
>rnd-5_family-6341#LTR/ERV1 ( Recon Family Size = 29, Final Multiple Alignment Size = 25 )
CTCTAAAGAGTACCAGATTATAATTTTTCTTCATGTTTTTAGTTGGCNCC
CTAATGGAATAGGTTCCTTTTTCCGTTCTGACATACAAATTACTCTTTTG
ATTGTCAAACTATAAATGTTATTTATCTCTTCTTGTTTTACTTCTAAGAA
AACCGAAATCATGGTATTTTGAAGACCAGAGATGCGAATCTCCCTCATTT
GGCATCCCGCTGGGCCTGGATCTGTTTTCACTGCCAATGCTCTGCCGCTA
AAACTATACAAGCACCCTCCCTCTAGGCCCAGGGACTNTCGGGAAGAGGN
GGGCATGTGAGATTGTAAGGGCTGGTTTTGAGGGATAAAATTAGATCAAG
GTCAAACCCTCCAAATCAAGGAGAGATACAAAAATGCCTAAANAGCTGGT
AAAACAAGNGTNNTTGCCTTCTAAACTATTATGTGTCACTTTTGCATCCA
CCCCAACCATAAAAATTTTCTGCTTNCCGTAGAATTAAAAAAAAATATTT
ACTGANAGGATAAAATACCTCGTGACAAAGCCTCCTGGGTATAATACTCC
CAGTTATGAGTTGTGNAGATAAACATATATATAAATATTTAATTTTTTTC
AGAACAATGCTTATGTTTTGTATAGCTAATTGCTACAAGTTGTAACNAAA
ACCAAGATTACAGCTCAACGCATAAAAGTTANAGACTAAGTCAGTTTTGT
AACCTTGCCTTTTGGCTTTTGTTNTTGGTTCTTTTATTACTTAAAAAGGA
TTTTAAGGGNTAATGAGTGCCTGCCCACNTCCATTCCCATCTGGCCTAGA
ACGNTTAATTGGCTATAAGTCTTTTGACTCTAAGTCCCTCGGCCATAGGG
AGTCCCGCCGAGGGAATGACACTGTAGAATTACNTGACTTCTGCTCTGAC
AAAACCNNTTCTCTCCCAAATACCAGTATATGGTGC
>rnd-5_family-6139#Unknown ( Recon Family Size = 28, Final Multiple Alignment Size = 25 )
TGTCTCATGTGACTCTAAGNTGAGGCCAGAATCAAGTATGAGGGGTTCAA
GATACATTCGTGAGAGTTAAGTTTCACCTTTGCACTAAAGGGTGGTCACA
GGGCCTGTTCTGTTTGGGTTTGGTAGGGACAGGACAGTGTGGCCCATATT
TCCATTACTGTAGAAGAAATTGCTGGTGTCCGTGGCAGGGGAGGGCACCT
GAGAACAGGAAAGGAGAAACCCATATTTTTATCTGTGGAGCAGCTCATTG
TTCCTGAATCTCTTCTGTTATAAAGGACAGAAATGGGTGGACTTTTTCTG
CAGGTCTTGGTCCTTCTGCCTGTGGGTGTGGTGGCAGCAGGTAAACGNGT
GGTGCTGACACCTTCAAAGGCATATTCTCAAGATGCACGTGTGATTTGTC
CAGAGAATCTCATCTGAGAAAGANTTCCAGAGAAGGAGGAGAAGGAAAAA
ATGGCTTTTTNTTTTNAGCTAAACATGTCTCAGATCAAGAGCTGCGTCCA
CTCTGCCTCCTGGAATGCCATGCGTTTAGTACTTCTGCAAACCTTTACTT
CTCTACTTGTGTTTTTTCTCCCTAATGAGTTTAACTGCTTTCTAAAATTT
CATTGATAGTCAAGGGTCTCTGAAAAATATTTCTTCTCTATATACCAGAG
CCTTCTCTACATTCTCTACATCATGGCTTCTTATATGCCATGCGGAATTC
TCACCATGAATTTATAATCTGCAATATTAAAAATGTTCCCTTTGTGGCTG
TTGAACATGGGAAGGTGTGGATACTCAAGATTCCTATTGGGGAAAAGCTG
GGGTTCTTAGTAAAGACGGAGAACATGTAATGTTGAGGTTCCATCTGTGT
TCTCCATTAGCTCTATGCAGAACAGGATTAAGAAAATGCTTATTTAAACA
AGATGGCATTTATTACCCAGAAAGTTCTGAAAAANATTATTAGGAGATAC
CTGCNCTCTAGGGTGCTAAAG
>rnd-5_family-106#LTR/ERV1 ( Recon Family Size = 29, Final Multiple Alignment Size = 25 )
TTAACATTTGGTGCCGAAACCCGGGACGGGGGTACTCCTTTGGGGAGACC
AGCCCCCTGTCCCCGCTCTCCCTCCGTGAAGAGACCCACCTGCGACCTCG
GCGCATCAGACCAGCCCAGCAGGATGCCACAGCCCTCTCGCCACCTTCAG
ATCGGGTAAGCAGTCTCCTCTCTCTTCCCTACCTTTCTCTNTCTTTTCCT
TTAGAGAAAAGGAGACAAGTCTCTCCCTCTCTCTCTTTTCCTTCAGAGAA
CAAAGGAGACAAGTCTCTCCCCCTCTCTCTTCCTTCANNTCAGAGGAGAC
AAGTCTCTCCCTCTCTCTCTTTTCCTTTAGAGAAAAGGAGACAAGTCTCT
CCCTCTCCNCTCTTCTTTTCCTTTAGANCCGAGGAGACAAGTCTCTCCCC
TCTCTCTCTCTCTTTTCCTTTAAATCCTTCTCCTTCTAGGTAGAGACAAC
CTCTTTTCCATCTAGTAGAGACAAAGGAGACACTCTTCNCGTCCAGTTCT
CTCGCTCAAAAACTCCGACGTNGGTCACGGACTCGGGAAGACAGTCTTCC
CTTGGTGTCTGGTCAATCGCGGGGACGCCCGCCTTGATCACTCACCCACG
TTACAGCCCAGGACTCAGTCAGGGACGCCTACTGAAAACCCTGGTAGCTG
CTTGCTCATTCTCCTCGTCTCTACTCCTTTCCTTAAAACTTACCTCCTTC
GCCATGGGCAATATTCCGCCCTCTATTCCTCCGTCTTCGCCTCTAGCCTG
CGTCCTAAAAAACCTAAAACCTCTTCAACTGTCGCCCGATCTGAAACCTA
AACGTCTCATTTTTTTCTGTAACA
>rnd-5_family-6750#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 25 )
AAATGTGAACCTGAAAGAGCCAGTCCTTCAAGATGGATCCCGAGTGGCTA
ACTGGGCCTAAATTTAAAATAGAGCCAAGCGGCCATTTGCTGACTAGAGG
TCACACATGTACTCTGAGTTCCCNGAAAACCCACACTCCCTNTTTAACTT
TGGGACTTTCAGAGCTCACCTGAACCCAACCACCAATCAGAGCTCANCTG
CATCGACCAATCAGGACTCAGCTGTATCGACCAATCAGAACTAAGCAAGT
TTGAATCCTTCATTTGCATAAATGGACCTGATTGGGAACCTGGGCGGGAA
CTTTCGCTATAAAACCCGAACCCTCCCTTTGTTCTCTGGAACGCACCTTC
GTTTTACACCGAAGGCTGCGTCTCCCCGGTTTGCAAACTGTTCACNGGAA
TAAAGTCTTTCCTCCAAATTCCTTTTCAGAGAAATTT
>rnd-5_family-3711#Unknown ( Recon Family Size = 35, Final Multiple Alignment Size = 25 )
TAAATTTCCANTTCCTTTCCACATTCCCAAANGCCAATTNTCCCTCTCCA
AGTCGCAACATTATCAACTNTTNGTCCTTTATTGTACATTTAAAACAGAC
GCAGTATTTTAATTGTTTATTTTTGTTTCACAGAGCGGTGGNTGACTCTT
ATTAAAACTTATTTTTCTGTTTNTGAACATTTCACATGANAGAAAAGCAA
AGAATAATCACCTGACATTCCACTGTAAAAAATCTTCGCGCTTCTCTTTT
ATCTTNCCTAGGCACANATCCTTANCAGAACGTCTTTGGGTTGAGGTTTC
CCTTTGGAAACTTTANAGGGTGATGTGTCCTCAGCCACCCTCCTGTCTTT
TCCTGGTCCTGGGTTTCAGAACTGTCTGGGGATGACCCAAGATGCTCACA
GTGGCCCTNTCTCTTGAGAGTGTTGTCTGATGAATATCAGCCCTGGGTCA
TCTTCCAGNGGACAGCCTGAGGTGTGGGGTGGAGCNTCTTAGGGGAGCAG
CTGGATGCCCTGGNGCTGAGAGGAGTCTCCTGATATACNCTTCCTCTAAA
AAGCTAACCGTCTTGAATATTAAGATTTTTTTTCTCCCAGTCCCAGCTTC
CNTTCCTGGNAGACACGTTGGTGCTGGTACTGAGGGGAAAAGGCANACAT
GCATCTTGTCCTCTGGNTTCTCTCAGGCTTGTGAAGGGAGAATAACTNTC
CCAAAGTGCAAGAAAACTCACCCCAGTGAGGTGGTGNAAGAACTTGCAAA
GNAAAATATACATCGGGCACACGGGGGGCACAGTGCANTGTCTCCTGGGA
GGGTGGTGATTGAGCACCTTTGAGCAGGATGGGGGTTGGNGAATNTCTCA
AGTGATGGACGCCCGACCTGACACATGAGTCCGACGTTTGTGTTCCANTC
AGCACCGCCNCTCCCTGNGTTTGTCACCTTGAAAATATTCGTTCATTTGT
TTCGGTATTTTATTAACTGTAAAATGTATTTTATCATTAGAGCTTGAAAG
GTAAGAGAAATATTTCCAAGAGGCAAGAAAGGAATGGATTTCAGAGAAAN
TAATATTCTNGTNTTATATTTCTTGGTTAAAAATTTTCATTTNCCTTTTT
CATTTCCCAGAGTGAATGTAGTAAGATTCTCAGGTCTGTTCTNTTTTAGA
GTGATTTCAAACGGAATTCCAGGGCTTAGCTTTGGGAATGCTACCANGGA
AAAAAAAATAAAAATTCTCTTCATTATGGCTACAGAAAAATGAATACATT
TCCACAAGAAAATACGGTAGATAATTGGCGAGTTACAAANATTTATNAAA
ACNTCAGTTCCTCTTTTTTGCAGGGTGGAGAATTTNTGACAGTGGATAAC
TTGTTCTCTGTCCTGTTATCTGGATTTCGGTTTAATGCTAAATTTTATGG
GATGAGACTTGGCAACTNCTACAGGTGTTCATACACTATTGTTTACTATA
TGATTTGTTATAAAAATGATAATTAAATGACACGTTTATTGCCTGGAAAA
GATAGATACTTTTATTTTTTTGTTGAGGTATAAAATANAAGTGCCTTANA
ATTTCCTNCCTATAACGTAAACACTGAGTTTGAGTAATTTTGCTGGATTT
ACTTATCACTGGGTATTTTACTTATTTAAATCTAAGTGAATANTCTTGAC
TNGGAAACAGANACATGGNCTTAGNGANTCCAAGCAAANGTCCATCCTAA
NCCTGCAAAAGGGGGTCATTGAAGGCCGAGTTAGTTCCTCTTGGGAAGTC
TTCACTGCAGGTGTCCCAATCTGCTCAAACCGACCATGGAAGGAGCTCTT
TATGAGGGGCCAGAGTCTTGGAAAATCGGGATCCACAGGNAGATGTGGTG
AGATTTGGGATGGGAGGAGGGTGTGATGCCCTTTCTGAGGGTGTAATTGT
CATTGTCTTGGGCTGTTTCTAGATAAATGTNAAATAAAATAATTTCGANT
TAAGGTNAGAAG
>rnd-5_family-1945#Satellite/centromeric ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
ATCATTTGTTTTGATTCAGNAGGTTGCAAACACTCTTNTTGTGGAATCTA
AGAAGCAATATAGTCAGGCCCATTGAGCTATGATNAAAAACCGAATATTC
CGCGTTAAAANCNAGAAAGAAGCTATCTGNGAAAATGCTTTGTGATGTGT
GNATTCAGCTCACAGTNTTGAACNTTNGTTTTNATTCAGNATGTCGGAAA
CACTCTTTTTGTAGAATCTAAGAAGCGACATTTCAGAGCCCATNGAGGCC
TATGGTGAAAAGCCGAATATCCCACGATGAAAACTAGAAAGAAGCTATCT
GTGAAAATGCTTTGCGATGTGCGGATTCAGCTCACANAGTTGAACGTTTG
TTTTTATTCNGNAGGTCGGAAGCACTCTTTTTGTAGAATCTAGAAAGNGA
CATTTNAGAGCCCATTGAGGACTATGGCGAAAAACCGAATATNCCGTGAT
AAAAACTNGAAACAAGATATCTGTGAAAATGCTTTGCGATGTGTGGATTN
AGCTCACAGAGTTGAACTTTTGTTTTGATTCNGCAGGTTGGAAACACTCT
TCTTTGTAGAATCTAGGAAAATATTTCGAAGCTCATTGANGCCTGTCATG
AAAAATCTAATATTGAATAATAAAAATCAGAAATAAGCTATCTATGAAAA
TGCTTCGCGATGTGCGAATTNATGTTACAGAATTTAACCTTTGTTTTCAT
TTAGCATGTTGGAAAATCTATGTGGAATTATGAAAGGGACATTATAGAGT
CCATTAAGGCCTACGGTAAAAAACCGAATATCCCGCGATAAAAACTAGAA
ACAACTATCNGTGAANATGCTTTGCGATGTGTGNATTCAGCTCACANAGT
CGAANCTTTGTTTTNATTCGGCAGGTTGGAAACACTTNTTTGTAGAATCT
AGGGAGAGATACTTCAGAGGCCTGCGACGATTAAAGACCATGAATCCCAC
GATGAAAACTAAAAANAAGCTATCTGTGAAAATGCTTTGCGATGTNCGCN
TTAAATTCACAGAGTGGAACCTGTGTTTTNATTCANCAGGTCGGAAACAC
TCTTTTTGTAGAATCTAAGAAGCGACATTTCTGAGCCCACTGAGGCCTAT
GGTGAAAAACCGAATATCCNATGATAAAAACTAGAAACAAGCTATCTGTG
AAAATGCTTTGTGATATGTGGATTCAGCCCAAATTTTTGAAGCTTTTGTT
TTGGTTCAGCAGGTTGGAAACNCTTTTTTTGTAGAATCTATAAAGGGACA
AGCATTCTATAAAAATGCTTTGNAATACGTACAGTCAGCCTACGGCTTTG
AACTTTTGTTTGGATTCAGCACGTTGAAAACACTCTTTTTGTAGAATCTA
AGATAATACATTTCGAAGCTTATTGAGGCCTCTGGTGAAAGACTAAACAT
TTCGTGATTAAAAACTAGAAAATATATATCTGTTAAAATGTTTTGGGATG
TGTGGATTCAGCTCACAGAGTTTAACATTTGTTTTGATTCGGAATGTTGG
AAACACTCTCTTTGTAAAATTCAGAAAAAACATTTCAGAGNCCATTGAGT
CCTATGGTTAAAAACCAAATATCCCAAAATGAAAACTAGAAAAAAATACT
CTGAAAATGCTTTGTGATGTGCGGATTCAGCTCATACAGTCGAACCTTTG
TTTTGATTCTGGAGGTTGCAATCACTCTTCTTGTGGAATCTAAGAAGCGA
TATAGAGGCCTTTGGTGAAAAANAGAATATTCCGC
>rnd-5_family-12668#LTR/ERVL-MaLR ( Recon Family Size = 28, Final Multiple Alignment Size = 24 )
TAGCGGACATTGTAGTTGTTCCCCAGCATCCATTCCACTCCTCTCCCACC
GTGTGNCAGCCGTGNGGTNTGGGTGGGACTGACCCCATCCCCAGCTCCAG
GGTAGGCCCTGACTGGTCTAAGCCGATCTGAGTAATNTCACCCTCCTGGC
CACAGTNATGTGGTTCANGGATGACCCAATATGCAGAATGAGGCTTAGGA
CTTTTATTCAGCATTCTGAGAAAGGAGATATNTTCCGTCTTTCCTCNCGG
ATGAGAACAAGGAAGCATCGTAGCCCTGGTTGCTGCTGGTAGCCATCTTG
CGACCATGAGGGAAGCCGGCCTGAGGATGAAGCCGACAAATGGAGGAGGC
ACAGNCAAGGGAATCATAGAAACGGAACCATATTCCGGATCANGCCGTGC
CTGAAGCCCCCCTGCCCTGGACTTTTCAGTTACGTGAGCCAATGAAT
>rnd-5_family-10958#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
AACACATCCGATCGGGGAACAGNGAGCGTCTTTGGGACGCCCCCGCAGCC
CTGCTCCCGTCCCCCGGTTACATCTTTGGCGAGCACGGGGAGGGAGCTGA
GCCCCTGCGCCCCGCCCCGGTTACA
>rnd-5_family-7696#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 24 )
GTTAGGGAAGCAGGAGCCTAGGAGAGCCAGAGTGACGCCATTTTAAAATC
AACTCCATCTTGAAACTAGCAAGGCACATTCCTAGAAAACAGAAAATAAT
AAAAATAAAATCAACTCCATCTTGAAACTAGCAAGGCACATTCCTTGCCA
GTCACGACCCATGGTCNTAAGATGTTTACAGCTAAGGAAGCAGCTTGGTA
ATGCCTGCAAGGACANACTCCTACAACAGAAAGTCCAGATGTCCCAATAC
CCATAACAATATATGCTTTCAAGATAATTATAGTTATGCTTTGACGTACT
TACACACTAAAATGTCAAGGATAGTTTTCTTTAAATCAACAGAATAATAA
ATTTTGTCATGCTGTCAGCCCACCCGCACGTAGGCACAGCTTAGCTTAGT
CTTTACATAGACAAGA
>rnd-5_family-13390#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 24 )
TGGCCCTTTGCCCTCGCTGGCGGAGGGCAGCCGCCCCACGCGACGAGGCA
AGGGGCCAACTGAGCTGNTAACACACCGCCGTCCATGGACGGCGGAACTA
AAGGAGCACTGTGACACCCCCTCTGGGGCTTCGGGGTCGCGGGCACCCTC
ACCTGGGTAGCTTGCTCCTGCTGGCGCCCGGAGCGGCCANTCGGACCCCG
CACTCACTCGTTCGCNACATGCCTGGTCTGGCCGCGGCCCCGCACGGAGC
TTGCTCCTGTGCTTGGCGCCTGGAGCGGCCGGCCGGATCCCGCACTCACT
CACGTGCTCCCTCCCGCAAGGGGCTGAGCGCAGCGGGCCGAGTAGACGGG
GCGCCCCTGCCGCGAGTCCGGCGAAGGGGCTGAGAAAAATCCTGAC
>rnd-5_family-3705#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
TATACCCAGAGACTTCTCCATAACAAAGGCCTACTCTCCAGGGNAAAGAA
TTTTNCAGAGCTTTATCCCAGCTGGGGGAAGGGAATTCCTCCCACTNCAG
CCCCCTCTAGCCTTCCTGTCTCACCTAAGCGGGAAAGACATAGTCAACAG
GGATCAGGGCTTCAAGGAAATAGATTGGGAACGCTGCAGCCAGGGAAGGG
AGTAGGGAACAGGGGGGAGAAAAAAGCTNTACCACTGGAGAAACACTTGT
GAAAGACACAGGCCCAGTGAGACACGGAGATTTAATTNNAAGATTATAGA
ATGCCTNTCCCCCTTCCCCACACTTTACCACCACACCAACAGGGCTCCAG
TATAATAA
>rnd-5_family-4816#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
TGAAGAGAAGTGGGTTAAAGGGTACAAACATACAGTAAGATAGAAGGAAT
AAATTCAATGTTTGATAGCAGAGTAGGATGACTATACTA
>rnd-5_family-617#LTR/ERVL ( Recon Family Size = 27, Final Multiple Alignment Size = 24 )
TTCACCAGCACCTCTAGCGAGGGCTTCCCAGCGAGTTTCAGCGGCACCCC
AGCGGGCGGCTTCCANAGTCCTCACCAGTGAGCGTTNCAGNAGACCCAGT
GGCTGACCGCCTTCCAGCGAGTTTTGCCGGCACCCCGGCAGGTACTTTCC
TGACGCAGCGCTGATCCACCGGCACCCCAGCGGGCGGCTTCCTGCTTACG
CGCCAGCTCCGAGCCCGTGGCACCTCAGCGAACTTCTCTGCCGTCCNGCG
GGCTACAGCCACGCCCTCTCCAATGAGGTCTGAATCTCAGCCTCGGGGTG
GGGAGAAAGGCCCCTTCCAAATGTTTGTTCCTTTCTTCCTTGGGTACTCT
CCCTCAGCCCTAGAGGTAGTAGCTGCTCCCTGTATTTGCTATTTCTGTGT
TCTTTAGAATCCTCTTTACCTCTTTTAGTAGTTAACCACCTTTTACTAGT
TAATAATTCTTTATATTAAATTTTCCCTGTCGTCACTGTGTGAAANTNCT
NTGTGATTTCTGTCTCCTGACCGGNCTCCGAGTGATACAA
>rnd-5_family-3667#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
TTGTAGATATNGACAAAATTATTCTAAAATTTATATGGAAAGGCAAANAA
ACTAGAATAGCTAAAANCAACTTTNTGAAAAGAAGAATAAAATGGGAAGA
ATCAGTCTACCCGATTTCAAGACTTACTATATAGCTACAGTAATCAAGAC
TGTATGGTATGGCAGAGGGATAGACACACAGATCAGAACANAANACCCAG
AAACA
>rnd-5_family-290#LTR/ERVL ( Recon Family Size = 27, Final Multiple Alignment Size = 24 )
GAGGAAAAGTTAAATATTAAATTTGAACTCAATTGAACATGGACACAACA
ATGGTCACCAGTCCCGGAACAGGTTGTGTGAGCCCCTTGAGGCATTCATC
CAGCACTGTTTCGGAGAAATCTCTATTTCAATCTATTCCTATATGTTAGT
TATTGAAAAACAACAGACAATCGCAAAAACAAGTTGACCTTTTTGTGTTC
CTTGAGCCCAGTNNCGAAGGGCCCTCGTGACTGGGCCTCATGCCAAACAA
CTTGTTACAAAAAGAGCTAGGGTCCCAGACGGCGCCAGAGCTTCATGAGA
CCNCTCCTCNTCTGTNCATGGGTGGCTGTCTGACTCTGGAGCCCAGGCTG
TTGCTTCTCGATCTGGTGATGCNTCCTCCATAGTCTGGTGAGTGTGTGTG
TGTGTGTGTGTGTGTGTATGTATATATATTTCCTTCTCCCCATCCCTTAT
CAATTTGCTTATTATATCAATTTGCTTATTATATCTGTATTGCCATATAC
TTGGGATAAAGGCTGTTTACCCTTAAAGGTATTGCA
>rnd-5_family-5233#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
CCTCAGACACCTCAACACCAGGGTCGNACCAGTATGCCAGGGAACCCACA
TGGNCCCGGACTCCAGGCCAGCCTGCGGGCCAGNCTCCAAGCCCGCCCCG
AGGCCAGCGTTCCACAGCCCCGGGCTCCANACTGNCCCCGAGCATCGGAC
CGGCCCCNGCGTCCTGGCTCCAGGCCGACCCCGAGGGCCAGGTNACNAGG
CCCCACACCCCAGCAGGACAGGCTCCAGAGCCATCTGCAGACTCACCACC
AGGCCAGCGCCCTGCAACCCCAGNCTCCAGGCCGCCTAAAGCGGGACNCA
GGNCTCCAGGTCCGCCTAGCACCAGGCCGGCTCCTGCGGCCCCAGGCTTC
AGGTCTNCTCCAGNGCCAGGTCAACACCCCTGGCCTCAGGCACCAGGCCG
GCACCCATGGNCACAGNCTCCGGGCACCCTGCCCAGGCCAGCCAGCCCCT
GGGNCCCANNCTCCAGGCCGGCCCCTGCGGCCCCANGCTCCAGTAGACCC
AGGGTCCAGGNCTNCCCCATCAACGCAGGCCCCAGTGCTCCCANNCGGNG
CCANTCCCCACGGACCCAGGCTCCAGGCGCGCCGGACCCAGGNTCCANGC
CGGCCCCNGCGGACTCAGGNCCCAGGCTAGCCCCTCATAGACCTAGCCTC
CAGGCCAGCACCTACANACCCAGGCTCCAGCCCCGCGGAGCCNCAGGCTC
CAGGCCGGCCCCCACGGACCCAGGCTCCGCCCAGTACCCAGGCCCCAGGC
TCCAGGCCGGCCCCCGTGGACCCAGGCTCCAGGCCTGCTCCAGCCAGNCC
CAGGATCCAGGCCGGTCCCATGGCCCCAGGCTCCAGCCGACCCAGGNTCC
AGTAGGCCTNGCCCCCGTAGACCCAGGCTCCAGGTCCGGCCCCNATGGAC
CCAGGNTCCAGGCCCGCCTCCACGGACCCAGGCTCCAGGCCCGCCCTGGC
GCCAGGCCNGTCCCGTAGACCGGGCCAGCCACCTCCATGGACTCAGGCTC
CAGGCCCGTCCCTGCGGACCCAGGCACCAGGCCCACCCCAGCGCCAGGCC
GGCCCCCGCGGACCCAGGCTCNAGGCCCGCCCCAGNACCAGGTCAGCCCC
CATGGACCCAGTACTAGGCTCATGCCATGGACCCAGGCTCCAGGCCCGCC
CCNGCGGACCCAGGCTCCAGGCCTGCCCCAGTGGACCCAGGCTCCAGGCC
CANCCCNGCGGATCCAGGCACCAGGCCAGCCCCNGTGGACCCAGNCGCCA
GGCCTACCTGCGGACCCAGGCACCAGGCCAGCCTGCCCGAGGACTCCAGC
AGCAAGCCCGCCCGTGGACCCCGCCAGACGGCCCGCCCAGAATCTCTGGA
CGGGCTGACTGGTGAAGACATTCCGCAGACAAATAGAGTAAGTCCCCANT
TCTTCAGAACGTGNAGACANCAACGCAGGGCNACAGGTANCAGAAATAAT
TATAAAACAAGATGACATACCACCAAAANAACANAATAAGACA
>rnd-5_family-4068#Satellite ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
GTCTCTCTCCTCCCTCGGAGGCCAGGAATCCGAGCCCCCAGCGCCTCCCC
CTCAGATCCAGGAGTCCGGGCCCAGCCCCCTCCTCCCTCAGACCCAGGAG
TCCAGGCCCCCAGCCCCCCCTTCTTCNGACCCAGGAGTCCGGCCCCTCAG
ACCCAGGAGTCCGGGCCCCCAGCCTCCCTCCTCCCTCAGACCCAGGAGTC
CAGGCCCCCAGCCCCCTCCTCCCTCAGACCCAGGAGTCCAGGCCCCCAGC
CCCCTCCTCCCCCAGGACCCAGGAGTCCGGGCCCCAGTCACAGCCGCCCT
CCTCCTCCCGGACCCCGTTCGGCCCCCTGCCCCCCTCCNCCCTGGGACCC
AGGAGTCTGAAACCCCGGNCTCTCACCTACCCCAGTCACCGCAGAG
>rnd-5_family-6060#LTR/ERVK ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
CTATCCTCCCACTGTGTGTAAGTTATAAAGGTTCTAACCCTTACTGTGTA
CCTGCCCAAAAACAAGTATGGCTACATCATGGCAAAGGAAATGCCTTAAC
ATTCTTGGCTGCAGGTAGCCTCAAACCAGGCAATGCAACCAATGCCACTT
TCCCNAACATTCCTCCCTGTGCTAAAGAACGAAGCCGGGAAAGTAATGGA
TTCCACTTTGGCTGGGAGGTCTGTCACGGGGAACAAGCCCGTAGCCTCCA
GTTAGGCAATTATAACATCTTAGACTGGAGCCCCCACGGCCGNTTGCAGG
GCGGCCNTACTGATGTCTNCGTCCATCGTAGCATCAATCACAGTTTCGTA
GCCACGTCTCGTTCCCCTATAATTTGGGCCGATGGGGGGATGGGATATCC
CAGACCCCAAGTAGAGTCCATGCCACCCCAAGGCACTTTACGGCGCCTGG
GACATCTTAGCACCTCCCTTAACACCTGGCATGGGACATATCATAATTCC
AGTAACAACTATACTATAACCTTTATTCATAATCACACNGATCAGTGCCT
AATTTGCACTACCCATCCATATGTTTTCCTTATGGGAACCAACATTTCCA
TTACACCCCAAAACTCCACGTTTGTGACCCGAGTGCAGGGACAGGCTTGG
TTCGCCTCATGTATCACTAATCACAACATATCTAATTTAAANATTACTAG
TGTCATGGTATTAAGGAGACAATCTGAGGCATTCCTACCAGTCAATTTGA
CACGCGATTGGCAAGGTTCCTCTGCCCTTGCCACCTTAGAACGTGCCCTG
TCCCAGGTCAGACACAAAAGATTCATAGNTACACTTATAGCCTTTATAGT
CTCAGCCATAGTCATCCTGGCAACTGCCAGCGTTGCNGTGGCATCTATTA
CTGAGTCGGTACAAACAGCTGCCTTTGTAGATAATCTGGCCAAAAATGTG
TCTAATGAACTTCTCTTACAGCAAGGTATAGATCAAAAATTCTTGCACGT
CTGCAAGCCCTCGAGGCTGCTTTGGAATATGTAGGGGAGCGACAAGATGC
ACTGGCATTCCGACAGCAATTAAGCTGCGACTGGGAGCATAAGCATATCT
GTGTCACCTCTCTACCATGGAATCAATCAATACATAGTTGGGATGAGGTG
AAACAACACCTCTGGGGAACCTTTCATGACAATTTAACAGCAGACGTAAA
GCAACTTAAAACTAAAATTTTAAAATCCCTTCACNCTATAGATCTACACG
CCCAACAAACAGCCATATGGAAGGATGTGCAAGATCATCTCTCCTGGTTA
GACCCCCATTCCTGG
>rnd-5_family-140#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 24 )
AAAATNNTTTCATCCTCCCCAATTAAGATTCGAATAGATCCATCAAAANC
TCTTCCAAANTTTAAACATACCTCTAGAGCTTGGAAGGGATATACTTANA
GATTTGAATTATATAAAAAAGGCTTGATTATTCCCATACAAGCCCGTGTA
ATACTCCAGTCCTTTTCGTANGAAAACCAAACGGTAGAAGATNAAGNTTT
GTACAGTGAANTNTTACTGTAATAGACCTATGTAGTGCATTCTTTAGCAT
TCCTGTGGACAATGATAGTCAATTTCTCTTCGCCTTCACTTGGGAAGACA
GACGATACGCGTGGACAGTNATGCCNCAGGGATATACTGAGATTCCAACT
TACTTTTCANAAATATTAAAAGCAGATCTTTCAGATGCCGACTTCCCTAG
GAAATCCACCTTGATACAGTACGTAGACGATTTACTTCTTTGCTCAGAGG
ATAAGCANNCTTCTCTAGAAGANAGNATTTATTTACTNCAACAATTACCT
TCAAAGGGANACAANGTNTCNAAAGAAAAACTTCAGTTCTGCCAAAAACA
AGTNAGATATTTAGGNCATCTAANNTCAAGGAGAGGACTTTTGAATTAAT
CCGGACAGAGTGAAAGGAATNTTAGCTTTCCCNATGCCCANAACTAAGAA
ACAACTGAGAGAATTTTGGGAGATTGGCAGGNTACTGTAGAAATTGGATT
CCAAATTTCTCTTTAAAAGCNCAGCCTTTATATACATTCTTAAAAAAANA
TAAACCAGACCTCTTGGAATGGACACAGAAAGAAAATCAGTTGACATTAG
AAATAATTAAGAATAGTCTTACTAATGCCCCAGTNTTAGGGCATCCAAAT
TATAANCTTTCATTTTCATTGTCTTGTTCATGAAAATCGGGGATNGNACC
CTTTGGTATTCTGACTCAGAAACACGGNGATCAAANAGACCTATNGGATA
CTATAGCCAACGACTAGACCCCGTGGCTNAAGGACTTCCNCCTTGCATGA
GAGCAGTAACAGCTACNGCCTTNTTAATAAAGAATTGCAAGTTTTGTACC
NCATTCTGTGGAAGCNCTNCTAAACTCNCATCATACTCAACATTNTTCAG
TTAGTAGACTGGCTTCTTATGAAGTTTTCTTCTNTCTGCTCCCCATATTA
CCATCTCCCGNTGTAATAATCTTAATCCNGCTACTCTTCTNCCTCCGCCT
NCNGATGAAACGCCNCACGATTGCGTCACTCTAACTGANCGGCTTCTNTC
TCCCAGAACGGACCTANAAGAGACNCCNCTTAATAACGCTGATGTTATTT
GGTTTACAGATGGATCGTACTTAAGGGATNAANNTGGAATTTATCGNGCA
GGNTATGCTGTCGCNTCTCTNACTGAGGTAATAGAAAGTGCTTACTTCCT
AGNATCAGCCTCGGCCCAGCAAGCAGAGTTAATAGCNTTANTAAGAGCCT
GTCAATTGGCAAAAGNAATAACGGCTAATATTTATACAGATAGCAGATAT
GCTTTCGGAGTAGCNCATGATTTTGGAATGCTATGGAAACAAAGGATTTT
TNACCTCTTCCGGTNAGTCCATNAAAAATGGGCANCTCGTTTCAGAATTA
TTGGAAGCCATATTATNACCAAAGTNATTAACCACTATCAATATTCCAGN
CCATTCAAAGCCAGACACTCCGGAAAGCAAAGGAAATCAGTTAGCAGATA
ATACAGCAAAAAGGGTCNCTAAACGTACTGAGAAGAAAATCAACCNATTT
TAGCTTTTATGAAAGCCCTTGATTTGATATAAAATTAGCTCAATCCAAAG
CTCCAAAAACAGAATAAGAAAACTGGGAANCAAAAGNGGGANCGTACCCC
NCNGAGANTGNGCTATGGTATGCGCCAANTGTTCTGCCCATANTTCCAAC
NAAATTACNGTCATCTTTCTTNACTTNTNTNCANGNTNTAACTCATTGGA
GCCNNGATAAGATGATTGNTTCAGGNGAACAGAATGTTACTGGTAACCTT
TAAGAGTTCTTAAGGTNATTTTCCTTTACTAGAATGTCCCTTTTAAGGTA
AGGCAACCANATTTTANTCAGCTGCCACCATNACANAGATANAAGTATNT
TCTGNTGATGGTTTACACGTTTTCTCATTGGGCAGAAGCATTTCCATNCA
GAAGAGCAACAGAAACCTTGACAGTANGTAAAATTCTCTTAGANAAAATT
NTTCCGACTCGGGGAGTTCCTCTGGANCTTCATAGCAACAGAGGTGATCA
GGTGATCATTTTGCTGNACAAATAATNCANTCAGTATGCAAAACCTGGCC
CATTNTTCAACATNNCNATTNTGCCTATNACCCCCANNCATCTGGATTAG
TGGAACGNACAAATGGAATAATCAAAACNCAACTGGCAAAGTTNACGGAG
GCTTTTAANCTCCCCTGGCCNAAGGCTCTTCCNTTGNCGTTGCTTAACCT
NCGATCNACCCCTTTTGGAAAACATCAACTGTCTCTNNTTGAAATNATAA
CAGGNAGACCCATGAAATTGTNTTCGGGANATTGTGAATCTGCGATGTTA
GATATNCTGCATTATTGCGANGGCCTTATAAGGCANCTCACTAAAAACCG
NAATTTGGTAAAGGATTCTTTCACAGCGCGCTCCCNGGAGACGAAGTNCC
TGGTCACGGTCTNCAACCNGGAGATTTTGTCTATTGGAAAAGACATCTAA
TAAAGGACTCCCTCCAACCACGGTGGAAGGGACCATACCAGGTACTNTCG
ACCAATCCATGTGCCGCAAAGCTAGAGGGTATAGACTCACGGATTCACAT
CNCTCATCTTAAAAAGGCACNACCTCCCGAGTGGACTGTANCTCCCGCCA
GAGATCTNTGCCTCCAGTTCACTAAACATTGAACTTCAACCCAGGATNAG
AAGCAGACGACATCTGATGNANTCAGCTTAAACCCAAGACACCGGACCAG
GCCTGTATNCAAANGAACGCCTNANATNAATAATNGNTAACAGACAGGGA
AGGTCTTNCTTTTCAGGTTCCCACTAAATTTCTTTTTTTTCATGCCTATG
TCCCTACGCCTTNTTGCCACTGCCACCCGCTGTCGCCCATGAAACAAACC
TGTTTCTACAATGGGCTCAGGACTATGCCGACAGATTACANAAAAACACT
TGTTGGATATGCGACCTCATGCCCCTTTCCAGTGGCTCCGGCCTGCCATG
GCGGGTATCTCCTTTCTAAGGACAGGATTGNATAGAATATCAGAAATNTA
TCTACNTCNCAGGAACGGTCATCGGTATTCTTAGCGCTGGCATAACNAAG
GACGATATGCACNATTGGCCCATTAAAAACACTTTTAAGAGCAAGGGACA
TGGGAAAAGTTTTTTAATGAAAAGGACCAGCTCATTAGCTTTCACTTTAG
CATNNCCCCAACTAAAAGAGAAGGTGATAGNTAGTGCCCCAAACANTGGC
CCATGTTNCAAAATGGNATAATAAATTTGGGATCTGGCTTACCCACCTCN
TTTGGCCAGCTCAGCCAGNANGCNCNTTTGTGCTNGGAGCAAAGGAANCA
CACCAAGGACNCGTGGCCCAACAGCGCNANAGATATGGGGNNGATACCCA
GAGAACGNTGTGNCCATATCATCATATTACAGNACANCAACTGGCATGCC
GCCGANTGGGCGCAGCGACCAGGTGTTTGCTGGCTATCTCCAAATGGGAC
ANNCTGGCTGCGTNGCACNAACCTAGGGCCGTGGTTACCTCCAGGGTGGT
TAGGACGATTTTCCNTAAGGTTACGCTCGGGCACAAGGTGAGTAATTTAG
ACCCTGCCAAAGCCTGNAAACCTTNTTNATTTACAATCTTNTCGGATTCG
TTCTGTATTCTATTGGTATGATCATTTANCTTCCATCNTTNTGCCACAAN
TAGGTATCGAAGATGTCATNTGGCACGTAGANGCCCTAACCAATTATACA
ANAAAAGGCCTTGAACGATAGCCACGTGGGTATCTCGTTATTAA
>rnd-5_family-5800#Unknown ( Recon Family Size = 27, Final Multiple Alignment Size = 24 )
TTTGCAGACGCCGCCGCCGCCTGGAGCCCTGTACTATCAGCCATGGTCAA
CCCCACCGTGTTCTTCGACATCGCCGTCGACGGCGAGCCCTTGGGCCGCG
TCTCCTTCGAGCTGTTTGCAGACAAGTTTCCAAAGACAGCAGAAAACTTT
CGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGGTTCCTGCTT
TCACAGAATTATTCCAGGGTTTATGTGTCAGGGTGGTGACTTCACACGCC
ATAATGGCACTGGTGGCAAGTCCATCTACGGGGAGAAATTTGATGATGAG
AACTTCATCCTAAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGC
TGGACCCAACACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTG
AGTGGTTGGATGGCAAGCATGTGGTCTTTGGCAAGGTGAAAGAAGGCATG
AATATTGTGGAGGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAG
CAAGAAGATCACCATTGCTGACTGTGGACAACTTTAATAAGTTTGACTTG
TGTTTTATCTTAACCACCAGACCATTCCTTCTGTAGCTCAGGAGAGCACC
CTCCACCCCATTTGCTCGCAGTATCCTANAATCTGTGCTCTCGCTGCAGT
TCCCTTTGGGTTCCATGTTTTCCTTGTTCCCTTCCATGCCTAGCTGGATT
GCAGAGTTAAGTTTATGATTATGAAATAAAGACTAAATAACAAAAAAA
>rnd-5_family-3501#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
AAAGGAAAATTAAAAATCTCAGGGACCCCCCGAACTTCTTATGCCAAAGG
GAAGGTTAAGCCCGGAGGCCGAGTCACGCAACACCATCTTCCAAATGAAT
AGCTGTTACTTAGCATAATTATGCATCAGCCAGATCCCCACGGAAAGGNA
AAAGGCCTCAGGCATCTGCCAATGACTGCCTCCACAGATCATTCGTAAGT
AAATTCTTTGCTGGCCTCCCATAAACAAGGACATGCCAATTGTAACTTNA
GGTCTACAATCTAAGTCTAGCTCCTAAAACTAAAGTCTGTTAGCATTACA
ATCTTNCCAGGTGCAGAACAAAGACAAGATGAGATTAATTTCATTCCTCC
ACCACTACCCGAGACGTCTGCATAATTNACTCTTCCTTTACTCCCTTTTT
CTTCAAACGTTCACCTTATCTTATGTAAAATGTAGATTTACTGGGTACTA
ACTAAAGTCTCACAGGAATGTAACCATTCGCCTTACCGCCTACCTGCCCC
TCTTCCTACATGCCTTCCCCCTTTTAAGGAAATGTATAAACACTAAACCT
TTCCCGGACGTGCCCTCAAGCTGGCTCAATAAACCTCAATGATTGAGACT
TATGCCTCAGTCACTCATTTCGGTTGT
>rnd-5_family-2275#DNA/hAT-Charlie ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
AATGGTCTTCAAACTGGGATGCNCATACCCCTGAGGAGTACGACAAAGAC
TTTCTAGGGGNAGTATATAGGCATAGATAGTTTTAAGGGAATCANTTTCC
AGATTCTCANCTTCCATATGTACTCCTTCCTAAAATCGATCTGCCTGAGA
ACTCTTTCTGGTCTGCCAGTTCCCCTTTCTCACCTCCTTTCATAACCGCC
TCCTTCTCCCACTTTACAAAAGAAAGGCATACCCCTCGTCCATCAGATCT
CACCANGGTGCATTGCCCCAAGGTGTGAAAATCTCCGGGGCGCCAAACAA
AGACAATTNAGAGTGCATCGCTTCTGAGGGAGAGTCCCNTGAGAGCAAAG
CAAAGAGAGCTTCAGTAAGAAATAGTGAAGGNGTAGCGCCTTATTTCATC
CAGGCGACAAACTCATGGCAAGNTCCGTGCCTTATATCATATTCTCTGTC
TATCTNCCTACCACTATCTGTCCATCTATCTATCTTAGAATTAGAATTCA
GAAGTGAGACGGTTGTCACGGGAACGCGTATGTAACACGTTTATTTGAAT
CGAAAAATGAAGNCANACTTTTTCTGACAGAAAGTAAGTCTGATTTGGCT
GATTGGTTTGACAATGAGGACTGGCTTTGCCAATTAGATTATGTGGCGGA
TATTCTCCGTAAATTGAATGAGCTAAATCTGCAGCTCTAAGTTTTGACGA
AAACATNTTTAAATATTCACTGTATACAATAGCTAAAANTATATCCTTTG
TCATTATTTGTCAACTNAAACGTGCGAGAGGTGCATAGTTTTTCAAATTC
TTAGNAGGTACAAGTGAGGTTCAAAAAATGG
>rnd-5_family-628#LINE/L1 ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
CACTTATATAACATTNTTGAAATGACAAAATTATAGAAATGGAGAACAGA
TTAGTGGTTGCCAGGGGTTAGAGGATGGAAGGTGAGGAGTNGNAGGGAAG
TGGGTGTGGCTATAAANGNGCAACATGAGGGATCTTTGTGGTAATAGAAA
AGTGTATTTTTACTGTCTCGATGTCAATATCCTGTTTGTAGTATTTCA
>rnd-5_family-3550#Simple_repeat ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
ATTTTTATCCAATCTATCTACCTNTCTACCTACCTATCTATCCGTCTATC
TATCTATCTATCTACCTACCTCTCCTCCCTATCTATCTATCTATCTATCT
ACCTACCTACCTATCTACCTATCTGTCTATCTATCTATCTATCTATCTAT
CTGTCTACCTATCTATCTATCTATCTATCTACCTACCTACCTACCTACCT
ATCTATCTATCTACTATCTAT
>rnd-5_family-1799#DNA/TcMar-Tigger ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
GCATGTATAAAACCTGATATATGGCACTTGATATTGGCATTGCAGATCAA
GTAGGGGAAATGACTGATATTCAGTAATGGTGCTGGGACATTTGGTTTTC
CATGTGAAAATATA
>rnd-5_family-2145#rRNA ( Recon Family Size = 29, Final Multiple Alignment Size = 23 )
AAAGTTAATATAGCTTAACCGTTCAAAGCAAGACACTGAAAATGTCTAGA
TGGGTCCGCACAACCCCATAAACANATAGGTTTGGTCCTGGCCTTTTTAT
TAACTCTTAGTAAGATTACACATGCAAGCATCCCCACCCCAGTGAGAATG
CCCTCTAGATCGCANAAGATCAAAAGGAGCAGGTATCAAGCACACNCAAN
CGCAGCTCAAAACGCTTTGCTCAACCACGCCCCCACGGGAAACAGCAGTG
ATAAANCTTAAGCAATAAACGAAAGTTCGACTAAGCTATACTAATNTTTA
GGGTTGGTAAATTTCGTGCCAGCCACCGAGGCCATACGATTAACCCAAGC
TAATAAAACTCGGTGTAAAGAGTGTTTAAGGCCTACTCTCAATAAAGCTA
AGCTCCATCTAAGTTGTAAAAAACTNCAGCTAAAATAAAATANACTATGA
GAGTGACTTTAATGTCCTGAAGACACAATAGCTAAGACCCAAACTGGGAT
TAGATACCCCACTATGCTTAGCCNTAAACTCTAATGGTTACATTAACAAA
ACTATTCGCCAGAGTACTACAAGCAACAGCTTAAAACTCAAAGGACTTGG
CGGTGCTTTATATCTTTCTAGAGGAGCCTGTTCTATAATTGATAAACCCC
GATANACCTCACCACCTCTTGCCCTCAGCCTATATACCGCCATCTTCAGC
AAACCCTAAAAAGTCGTAAAGTAAGCACAAGTATATACGTAAAAACATTA
GGTCAAGGTGTAGTCCATGAGGTGGNAAGAAATGGGCTACATTTTCTATA
TTCAGAAAATCTCATGATAACCTTTATGAAATCTAAAGGCCTAAGGAGGA
TTTAGCAGTAAACCAAGAATAGAGTGCTTGATTGAATAAGGCCATGAAGC
ACGCACACACTGCCCGTCACCCTCCTCGAATACTNCTCTAGAAATCACTA
TTACTAANAATTTCTACACACGTATAGAGGAGATAAGTCGTAACATGGTA
AGCGTACTGGAAAGTGCGCTTGGACAAACCAAAGTGTAGCTTAANCCAAA
GCATCCGGCTTACACCCGGAAGATTTCATCATAACCTGATCACTTTGAGC
CAACTCTAGCCCCAAACCCCGNTAANAATATTATCGAACTACTTNAATCA
AACCATTTACCCTAACAAAAGTATAGGCGATAGAAATTTNTATCCCGGCG
CAATAGACATAGTACCGTAAGGGAAAGATGAAAGAACTAAATCAAGCATN
AAAAAGCAAAGACAAACCCTTTTACCTTCTGCATAATGTATTAACTAGAA
CATAACTTTACACAGAGAACTNCAGCAATGTCCCCCGAAACCAGACGAGC
TACTCAAGGATAGCTAGAAGAGCACACCCGTCTATGCGGCAAAATACGGG
AAAATCTATGNGTAGCGGCGACAAGAGCCTGGTGATAGCTGATTGTCCAA
ACAGAATCTTAGTTCAACTTTAAACTTNCCCACAGAACTACTTAATCCCC
CTGTAAGTTTAACTGTTNGTCTAAAGAGGGACAGCTCTTTAGACCCTAGG
AAACAACCTTCCTACAGAGAGTAAAAATTTTACCACCATAGTTGGCCTAA
AAGCAGCCACCAATTAAGAAAGCGTTTAAGCTCAACATCTAACTACTTTT
AATTCTANCCCTCTTGAACTCCTAACATTACATTGGACTAATCTATTACT
CAATAGAAGCAATAATGTTAGTATAAGCAACATGAAGACGTTCTCCATTG
CATAAGCTTACATCAGACTGGAATAACCCACTGANAGTTAACAGCCCATG
TTATAAGCACCCTATTATTTACACTGTCTTAACACAGGNATGCTCTAAGG
AAAGATTACAAAAAGTAAAAGGAACTCGGCAAATCTCACCCCGCCTGTTT
ACCAAAAACATTACCTCTAGCATTACCGGTATTAGAGGCACTGCCTGCCC
AGTGACATGTTCAACGGCCGCGGTATCCTGACCGTGCAAAGGTAGCATAA
TCACTTGTTCCCTAAATAGGGACTTGTATGAATGGCCACAAGAGGGTTTA
GCTGTCTCTTACTTTTATGAATGGCCACACGAGGGTTTAGCTGTCTCTTA
CTTTTAATCAGTGAAATTGACCTATCCATGAAGAGGCAGATATAAATAAG
ATGAGAAGACCCTATGGAGCTTTAATTCATTAATGCAAAATAAAACTCAA
ANAAGCCTACAGGCACTAACCTACTATCCCTGCATTAAAAATTTTGGTTG
GGGTGACCTCGGAGCATAATTCAACCTCCGAACGACCTAAACTAAGACCG
CACTAGTCTAAGTGAATTANCACACATTGACCGATAATTTGATCAATAGA
ACAAGTTACCCTAGGGATAACAGCGCAATCCTATCCTAGAGTTCATATCG
ACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCCTAATGGTGCA
GCCGCTATTAAGGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTG
AGTTCAGACCAGAGNATCCAGGTCGGTTTCTATCTATTTAGCATTTCTCC
CAGTACGAAAGGACAAGAGAAATAGGGCCCACTTCATAAAGCGCCCTCAT
TCAATAGATGATATCATCTCAATCTAACAAATCATCACACACCCTGTCCG
AGAACAGGGCTCGTTAAGATGGCAGAGCCCGGTAATTGCATAAAACTTAA
AACTTTATAATCAGAGGTTCAACTCCTCTTCTTAACAGCATGCCTATAAT
TAACCTTCTCCTACTAATTATTCCCGCTCTAATCGCTGTAGCATTCCTNA
CACTCATCGAACAAAAAATTTTAGGCTATATACAACCATGCAAAGGACCC
AACATTGTAGGTCCCTACGGACTACTTCAACCATTCGCCGACGCAATAAA
ACTTTTCATCAAAGAACCCTTANGACCCTCAACATCTACTATAACCCTCT
ACATTATTGCTCCAACTCTAGCCCTTTCCATTGCACTCTTCTCCTAAGAA
TTCCTCTCCCCATACCAGACCCCCACTAATTAATTTTAACATAAGCCTCC
TATTTATACTAGCCACATCAAGCCTAGCCGTCTATTCCATTCTATGATCA
GGATGAGCATCCAATTCAAAATATGCACTAATCGGTGC
>rnd-5_family-10799#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 23 )
CTGATAGAGACAGGAGGCAGCCAGGGGTCCCCGGCGAAACCCCGCCTTCA
AGCCTAAAACAGCCTGAAGGCCGAAAAACCGGACTGCTGGTCCCGGATGA
AGCCCGCCCTTTCCCGACTGATTCTTTCTGAATAA
>rnd-5_family-2008#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 23 )
ATTCCATTTATATAAAGTTCAAAAACGCAAGACNAAAATAAACAATATAT
TATTTAGGGATACATACATANGTGGTAAAACTATAAAGAAAAGCAAGGGA
ATGATNAACACAAAATTCAGGGTAGCGGTTACCTCCAGGGTTGGGNAGGG
AAAGCAGGAGGATATTGTAGACGNAGACTCACGAGGGNCTTCAAGGGTAC
TGGTAATGTTCTATTTCTNAACCGGGATGCCAAGCGCGTAGCCACTTCTT
TCAT
>rnd-5_family-847#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 23 )
TTTTTCTGTTTCTCTGTGTGTCTATCTTCATGCACATACAGAGAAAATAG
AAAGTTGAAAAAGTTTAGATAGTAAAATATTCTTTAAAACCTGATAGAAA
ATTGGAGAAATTTGGCTAATTAACATTGCTCATAGTTAAAGCTCTTAGTC
TTGATGAAGGTAAANTAAGAAATATTGTAAAGAAATGTATCGGCAGTTTG
GCAATTCTTTTGTTAATATAGTTAAGCATGAAGCCAGATTTAGCATGGAG
CCAAATTTCACATACATGCTTGCATTGCTTCACACTATATTTGCTGTTCT
GCGTAGATAGTACTAGCACTAAAGTACTTACTGGTCACGTGCCTAAAGTG
AATTTCTTAATTGCACAAAATGTATAGTGGTTGGTGGACTTAAAGACATT
AATTTGTGTACCAGGAACAAAATATTTATTGTGTGTTTTTTAGGACTCTG
GGTAACACTGTAGCCTCCAAGGTAAACTGAGTAGGAGAAAAATTTGGGGT
TGGTTTCTCTTATTTGTTTTGCTTTTAATTTTCATTTATTTGCTGTTTGT
TCTCCTTTGGGTTTTACTTATATATACATATATAGTAAACTATTGATNTT
TTTTAGTTTCTAATGGAAGGCTTTTATTTGGTTCTATGAATAGTCATTTT
GTTTCCTATGCATTTCCAACAATTCATCATTTGCTCTATTTATCTAAAAT
TCCTAAGCTACCTTCGTCAAGCCTCCAAAAATTGATAGAGCACACCAGCC
ATTTAAAATTTGATTGGTTTTGCTTACCTCTGATGATCTNGAGAGCTNTA
AGAGCTTTAAGGTTCCTGGCAAAACAAAAATAANACAAAAGACTTATTTT
TACAAGTTCTGAACAGAAATAGTACATTATTTATTTTGTTATTTGGAAAA
GTAGGTGAGAGTAGAAATGTTTAAATNGTATTTATTTCCAAGGTAATTCA
ATTCAATCAATAATTTGAGTTGGTTTCAGATCTTTTCCTTTAGGTAATGG
AGGAAAANTTGTGATATGGTACAAAGTTTTAATGTTCGGGAAAGATTGGC
CTTGTCCTTAAGGAAATTATTGATTGGGATTTCTCTCAAACTACTTTAGT
TGTGTTTACCGTTATTAAAATTAAGTGACATTCACTTGGATTAAGTAGTA
AATTTTAAAAAGTCGAGACTTTCTAGTGATTTTTGATCCCAAGCCATTTA
TCACTGATGGGCCTTCGTGTGTGTACTTGAAAACAAAATACGTACAAGTG
TTGCACTGGTTTGAAGATTTTAGTGGCGAAAGTTACCTAATCAGTTGTCA
GTACTGTATCTAGAAACCAATCTTGGAAATGTGTGATGATGCTCTTTTAA
ATAGCTGAAAAGAAATTATTGTGTGCTTGTTCTTACTTTGTCCCTGTTTT
GTTGTATANTATTTAAGTGAAAGGAGATTATTTATCCTCATACTGAATTT
CCAAAACTGATATTTGCGTTTACCATTTTTTTAATGATGGAGAGAAAAGT
TAGTTGTCTTACTTTGATAAGTTTGGCATAGGACCTATCACATTTTTGAT
GCTTTCGGTCACAGTTCTGTCACTAGAATGCTAGCAATTAGACATATGCA
AGGAGTAACCTAACCACTTTAATACAGTGGTTTGAAGTGCTGCAGGCAGT
ACAGTGACATGTTAGAATGACAGGACTTTCTGTAGTATAAATATTCTATT
AACTAATCA
>rnd-5_family-3092#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
AGTTTCTTTCAGCAGAGGCACAGTTGCAGTGCTGGGCTCAGCGGGGAAAG
TCTGCAGCTCTACCCCAACAG
>rnd-5_family-5977#DNA/hAT-Charlie ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
TTCCCAANCTGGGGTCCCTCGNNCCTCAGGNCCACGAAGGTNGTAATGAG
GGTCTTCGAGCTATTTCAGCATTTCAGAAAGCCGAACAGAAACTCATTCA
CCCGTATAAGGCTGCACAGGCTAACTAAGACGTCAAATTTCTTTGCTTTN
GGCTGGAATTATATCAACTCAGTNTGGTAACACTGGTTATCTCATGCTGA
TCAGAAGCTCTGATTGGCAGTTACANATGTGATTAATAAAACACGGGAAA
ATTAATTACTACTNTATAAATGCATTTGGTACGATTGGCAACANCTTT
>rnd-5_family-146#LINE/L1 ( Recon Family Size = 47, Final Multiple Alignment Size = 23 )
GCAAACCCTTCGTCCCCAGGGCACAGGCGAAGACCCATTGCTTCTGGGGA
AGGGGTAAAAGCAAAANAACCCCTCTGCTCCTGGGGAGAGGCAGGAAACC
GTNCTGGGCCCAGGATCCTGCACCGATACNAAGCAGAGGTCTNCTATAGT
CGGGGGAGAGACAGGAAACTCTTNCNTCCCAAGACCGANACCGCAGATAC
AAGGCAGAGTTTGGCTGGATAGGAGAAGGGAGAGGAACAAGACACAGAGA
CGCAGGCCCCGCTCTGAGGCCNAGGCTGGACCACAATCGCCCTACNATGA
GNCTAGNCCAAGTAAAAAGCAACAGCAGTCTCCCAGTAGCAGTCATCTTT
GGGGAGCAAGAATGTAAAGAGAGAATTTGT
>rnd-5_family-5560#DNA/hAT-Tip100 ( Recon Family Size = 30, Final Multiple Alignment Size = 23 )
TTTGATCAACCGTGCTAGAGGAAAGACAAAATTATCTCGNTAGAGNAAAN
ACCGAAANAATGNTATCGAAGAATATGNAACCAAAAGTGTAAGGAAAAAG
TNCTATAGAGGTGTGCCAGTTAGTTAATNAAAATATTATTTTANTTTCTA
GATTTGGTGATGTTTGCGGTATTTGTCAGCTTTTAAATCAATNATTTGTT
GTGATTTTTTNTTNTTCAGNNTAAATATTCACTTTTGTACCTAATTTTGT
ATTCATAATTTTTGTATTCTTTTTCTTAAAGAAGTACTCCCAAATTGTAT
AAGCTTCAGGNCCCACAAAACCTGGATCCACC
>rnd-5_family-5548#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
AAGAGGCAATCCGCCATGGGCCCTGAGCGTTCCTGCATGTTCTTGCTGGG
TATGCCAAGAATGCAAGGCCCTGACCGCTCTTTACCCGGGCCATTTCTCA
GGGTTGTGTTTGCAGCGAGCAACCTTGAAGGATGA
>rnd-5_family-3499#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 23 )
TCCCTGACCCCGAGCTGNNGCTGTCAGNTCTTGGGNNCACATCACNTTGT
NTTGTAACCTGCCTTCAAGTGTGCCAGGACTAGAGTTCTCGGCTCNCCTT
CCCGACTGNGAGCATAAGCTCCTCGAGGCAGGGTCTGTACCTCAGAGCCT
GGCACNTAGTAGACACTCAGTAAATATTTGTTGAATGAATGAATGAATGA
AT
>rnd-5_family-6368#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
TAATGGTGTCAGAAGCGGGACCCGAAGCGAGCTCACCTCGGAAGAATCGG
CGGCCCCTGGAACCGNGTGCGGTACTGACTGAGCCTTCATTTCAGTTGCC
TTTTCTGCCCTGGTGAGTCTTCTCTCGGGCTGAGACTCCCTCCTTTTGGT
AGAGGCTTTTTTTTCATTTATTTGGGATCTGGTTTGGTTATAAGGCCACC
TTAAATAAAGGACCTTGCATCCCTCCTGGGNCNATAAAAGACTATCTTTT
CTGGCAAGCCCTTTCTGGTATAAAGACAAGTGTCCTTCTGGNTTGAGTAC
TCTGGTTTCTACGGAATTTACATTCTGTCTNCGNGGCTGTATTCTTNTCT
GGTGAATTCACTTTTGTTTTTGTCTGCGCGCCTAGTTTAATATTTTGTTT
GATCTGCACGCCTGGGTTAAAATNTTTGTGAGCGCTCTNATTTTGGTTTC
ATTTTGATTANNCGGTATATCTGTAAATGATTTGGCTCTTTTCCCCTTGC
TTGTTTCTGAAAATCTTCCGAGAGCAAAAATAAACATTCTAAATGGTGGG
CGCGGNATGGCTAATTAAAAGCCACTAGAGCGGTCACCACCATCTAAAAC
ACCAGTCCAAACTCCTGACATTCTTGACAGGATTTATAGGATTTTCTTTG
CTCTCGAGAAATTAGTAAGAAACGGAATGGGATTCTCAAATATTAAGGCA
TGCCAAGCTTTCTGGGACTCCAGCCGGCTACATATTATGGCCNTCCTTGT
GCATATTTTTNAACCGATGGGCATNATANNATANATTAANAAAGCCTCCA
ATGGTTATTCATTCTTANCTAACTAAACCTGCAACTATAGAGTTAACATA
TAGAGCCTTCGNAGTTCTCTNTTTTTTTTCTGCCTACTTTGAATCTGCTG
ACTTTTCTATTGGTGTTGAGATAAAACTCACTGTTGCTTATTTCGAAAGC
CGCTTAGATCTTTTTTAAAGAGCATTCAGCCAGGATAAAGATAAAACCTG
GCTTTCAAATTAATAGCTTTACAAATTATAATAGCTCCGTGGCAACCAAC
AACCTAGACACATTCTGGAAATGTAAATTTAGGTTTGCCTAACTATAATT
GCTTAGGGTGATGAAACGAATAATTGAAGGATTGATATTCTAAAAGGAAA
AANTAGATAAATGTTTATAAANGTTAGGACACTCAGATCAAANAGGTCAA
AATCTTGAGCTCAGAGCAATAATGTAAGATATCTCTATCTAGCATAAAAA
TTGCTTTGTCTGTCTGCCATACAGGGGCCAGAGAAATGNCCGAAAAAAAA
NACCTGCTAAAATGCTTCCCTGCCTGCCCGCATTGACTAGTCAAGCAAAC
NAGACCAGAAACAAGANAGATTTGTTACTAAGACTTCAAGGCNACTGGAG
ATTTTGTTTTTCTTATGCAATTCANCCAGTCCCAGCTAAAATGTAAACAN
TNGAAAATTTAACCCTAAACTCATTTGAAACTGAAGAAAGAAAAAGAGGA
TANAAAATTTATTAAAAACCAAGAATGCTTTACCCAAAAGTTTTGGTCCA
CAGNTTTTNTTAGATTACCTATTAGGGAAAATAACATTTATTCATGTGAA
CAGGTCCCATTTTGTCAGAAATATAATTTGGATCCAACTNTCTTTTATAA
ACTGGTCAGTTNGTATTACTATGTTACTGTCTCGTGACCGAAATTCTAAA
ATGAAAGCTATAAGATCTTTNATTTGTGTGTGTATGTGTATGTGTTTATG
CGTATGTGCACGTGTTATATGTTGTGTCTACNNGGTNAAATCTGGTGTA
>rnd-5_family-8591#LTR/ERVL ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
GACTGAGGTTTCCCGAAGAAGAAGGAATTCTGCCTCAAGACTGCAACATA
GAAACCCTGCCTGAGTTTCCAGCCTGCTGNCCTGCGGAATTCGGACTCAA
GACTGCAACATCAACTCTTGCCTGAATTTCCAGCCTGGCCTTTCCTACAG
ATCTAGACTTGCCANCTCCCTCCTAAAACCGACTCNCTCTCTCCCCCCCG
C
>rnd-5_family-1033#Satellite ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
ATGGCCAGGCAAGAGAGGAGAGTCACATCACCTAGGTGCTGGGCCCAGCG
ATATGTCACAATNCCCTCTGTGGGCAGGGCCCAGGCAAGAGAGGAGAGTC
ACATCACCTAGGTGNTGGGCCCAGNGATATGTCACAATGCCCCCTGTAGG
CAGGGCCCAGGCAGGAGAGTCACATCACCTGGGTGCTGGGCCCAGCGATA
TGTCACAATNCCCCCTGTGGGCAGGGCCCGGGCAGAAGAGTCACATCACC
TAGGTGCTGGGCCCAGCGATACGTCACAATCCCCCCTGTGGGCAGGGTCC
AGGCAGGAGAAAAGAGTCACATCACCTAGGTGNTGGGCNCAGAAATATGT
CACGACGCCCNCTGCGGGCAGGGCCCAGGCAACTNTNGGCNGNNTCTGTC
GGTAGGAGATTCAGACCTGCAACAGTGGGCTNTGTCCATGTGNGAGGATG
ACAATCTTTAATGTTGGCTGGGTGTGCATACGAGAGTCACAATCTCTAAC
CTGCTGTGGGCAGCCCAGGCAGGAAAGAAGAGTCACGTCATCTAGGTGAA
TAACTGAGAAATATTATTCTCACACCAAAAAATATGTCACAATGACCCAT
ACAATCTGGGCACAGGTAGAAGAGACATCTAACC
>rnd-5_family-4141#LTR/ERVL-MaLR ( Recon Family Size = 29, Final Multiple Alignment Size = 23 )
AAGTAATATATNTAGCAGACCCTCATCATTTTCGACTGCCCAGTATCTGA
GCCCCNTTTCCTATATTTAGGAAATCCCCTCATTNTGGAGGTTTTGGGAA
GAGGGTAGGTGGAGACCCTCTTCCATCTGTTCTCTGGAAACGATCTTTTT
AACCATTCCCTGGTCCACACGACTAGACTCGGTCAATCGGATGCCTCTAT
CCTGAGCTTTGAATCTGGAGCAAGTGATNCAGAGACACAGGCGTGGCCTG
GGATGATNACAGCCAAATGACGGCGTCTGGCGGCAGTCAGCAGCAGGACT
TCAGTGGCGGTAGCGNCAGCGCCGGGCCCTCGGCAGACGGTTCCTGNGAC
AAGGCCTGGGCTGCGTTGGCTGCCCAGNCTCCCCTGGTTCCTGCCCATTT
TCCGAGCCTGGTTCTCCGGCCTTCCCGTTGATTCTGTGAGCTACCCGATA
TCCTTCCAATAAATTCCTTTTCTNCTTAAGTTAACCAGAGTTAGTTTCTG
TTGTTTGCAACCAAGAATCCTGACTGAAACAAATTCAAATTATTGGGCAG
CTATAANCCAGGAACTATGCTA
>rnd-5_family-16#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
TGAGGCAGGATAGGTAGTCAAGGAAGCGACCGTGTCCTCGGGACGCGGCA
ACCGTGGTGACCGTACAGTCAACACAATAAGCCTCAGCGTTCGCATTGTA
GTCGAGCTCATTCAAGCAAAGCTATCTTCAGTAGGGAATTTCCCCTGTAG
AGAGCATGCGCATTTTGATTTTACCTGTCCTCAGACTGACCCTTTGCTCA
TTATAATAGTAAAAACACACCCCTGGGTGGAGATTTAAGATGCTAATGAG
ACATGCGACGTATGAACAAGCATGTACAGCTACTGCGCATGTGCACCCAG
AGGACCACCCAGAACATGCTTACTAGTAACACCTCTTCCCACCTCCTTAT
GAATAATCATGTAAGACTCCCATAAAGGGAGTCTCCCTAGTGCCAGTCTT
TGCTGTCTCATCCTTACGAGCAGCCCGCCCTGAATTCTCTCTCTCAGGGT
GTACTGTCTATTCTGCACCTAACTTTCAGAATATTCTTTCTCCTTTGCAA
TAAATTGCTCTATGCTGCATCTCCTTTGCTGTGTGTCTCTTGTTTAAATT
CTTTTAAACTAAGAAGACAAGAACCGAGGTNTCACANCAGCCGTCAACA
>rnd-5_family-13863#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 23 )
AAAAGACAACAGAAACAGACCCACAGGAGATCCAGATATTGGAGTTATCA
GACACGGACTTTAAAATAACTATGCTTAATATGTTCAAGGAANTAAANGA
CAAGACGAAAGAATTTCAGCAGAGAACTGGAAACNNTATAAAAGAATCAA
ATGNAAATTCTAGAACTGAAAAATACAAAATTAAAATTAAGAACTCAATA
GATGGGTTTAGCAGAATATTAGATACAGCTGAAGAAGAGAAAATTAGCGA
ATAGAAGATANGTCAAGAATATCTGAACACGGAGAGACTAAAGATAGAAA
AGTGAAAAAGGGACATAAATAAGAAGGTCTAACATATACGCATAACTGGA
GTCTCGAAGGAGGAAAAGAGAGAATAAATGNGGCAGAAGCAATATTTGAA
GAGATAATGACCGAGATTCAAGAGGTANTTTAAATTGTCTCTGGNAAGGA
ANAATACAAAGAAAACNACACGCAGGCACT
>rnd-5_family-4476#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
GTATTATAAAGATAGTAATTTAAAANGTACTGAAACCNACTTCTGCTTCT
GCCTATATAGAATAGCTGATACCAGACTAGCCCTNCCGCCAAAAACANCC
ATAATGCTGAAAGAANGTGTAAAACTGTAACCTTTTTCAGACANTGGACA
ANAGGNCATGCAAGACTGTGATTCTTGAGAGAAGGGAAACCCATGAAGGT
GATACCCNCATGATCTCCTAGCTTTCTGCCTGGGACANTTTCTGACCAGT
TGCACAGCGAGCTGAAGCCCGAGCAAGCATGGCAGTCCCACTGAGCTNAG
GAGGCAGAGATCAGAGTTCGGGGCAGCTGAAGCAGCTGGAATCTGCGGAG
CAGGGNATTAGAGAGGAGGGAGNTGTGCAGAGAAGGAGCTCCCAGAGTCC
GTGTGGGGCTCCATTTGCATGCCTAGTTCAAGGACTGGGCTGCACGCGCG
CAGGACGAGACTACGCGAGGCTTANCAGACAGAGCGGCTGCTNCAGGATT
GAGAGTGGAACAGAGATGCTGAGGTCGAGNAGTGCTGGAGGGGACGGGAC
GCTGGAGTTCCAGCCCNGCCAGAGTGGAGAAAGACCTCATACACCTCGTT
AACACCCCGGGCATCCAGCTGAGACACCAGAAAGGCTTNCCTTAGGAGTA
AGGACCACACCCTAGAGTAAGACCTATTCTAGATCATCCTACAAAGCCTA
AAACCAAGTCCTGACAAGATCCGCAGGGAGACAGATTTGGNAGTTGAGTC
CTGCCAAGTTAGAGGGCTTGGGAAACACCTTGGGCTTTCCACAGATCCGT
NCTAATAAAGCATAAAACTANAGCCTACACAAGTTCAAGNTGATCAGCCA
GTAACTGNACTGCCCGCTAGAACAAAATT
>rnd-5_family-5#Simple_repeat ( Recon Family Size = 27, Final Multiple Alignment Size = 22 )
TTTATTTTTTTTTTTTGGGGGGGGAAAGGGAGGAAGGCAGGAAGGGAGGG
AAGGAGGAAGGGAGG
>rnd-5_family-1417#LTR/ERVL-MaLR ( Recon Family Size = 26, Final Multiple Alignment Size = 22 )
CCAGCTGGCTGGGACCAGGGCAACCTTGAATTGCCATGTTGAGATGGCAG
AGTCACAAGATNGAAGNAGCCTGGGTCCCCTGAGTCACTGCNTGGAGCAG
CACCACCCACCCGAGAATATCCGCATTACACTTTGCATGAGCGAGAAATA
AACTTTTATGCGGTTGAAGCCACTGAGATTTNAGGGTTTTTTATTATAGC
AGTTTAACCCGGCGCTNACTAATGCACC
>rnd-5_family-265#LINE/L1 ( Recon Family Size = 40, Final Multiple Alignment Size = 22 )
CAGTGTTGGTGTATGGTGGGAAGGAACTTTCACACGTTTTTGGTGGAAAT
GTAAAGTCGATGNAAACTTTCTGGAAAGCGATTTGGCAATATATANTCAA
AGCCTTAAAATGTATTCNTACCCTTTGACCCAGTAATTTCACTTCTAGGA
ATTTATCCTAAGGAAATAATCAGAAANGTGCAAAAAATNTATGTACAANA
ATATTCATCGCAGTATTATTTGTAATAGCAACGGAGGATAGAAGTCCAAA
TGTACCAATAAGAGAATGGTTAAATAAATCAAGGTATATCCATGCAATGG
AACACTCTGTAGCCATCTANAAATATATTNTCAAAGGCTATTTAATGACA
TGGGAAAATGCCTTAAGTGAAAAAAAGCAGGGTATTAACTACATGTGTAG
TATAATTCTCCAAA
>rnd-5_family-1816#LTR/ERVL-MaLR ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
GTGCTATGGTCTGAATGTTTGTGTCTCCCTCCAAATTCATATGTTGAAGC

>rnd-5_family-1583#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
CATATGAAAATACGAAAATCTAGATGAAAATGGATAATTTCCTAGGAAAA
TACAATTTACCAAAATTGACCCCANTAGAGATAGAAAGCCTAAAAGACCA
ATTTCCATAGAAGAAATAGAGAAAGTTATCAAGGAACTACCCCACAAAAA
AGCACCAGNCCAGATGGTTTCACAGGGGAATTCTACCAAATCCTTCAAAG
ACCAGATAATCCCAATGCTACNTAAATTGTTCCAGAGCACNGAAAATGAA
GGAAAACTTCCAAATTATTTTTATGAAGCAAGTA
>rnd-5_family-865#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
TGCATGAGGATCCCACGGTGANCGCGGGATCCGGGCCGGTGCGCAAGCCA
GACNCGGCCCAGTGGGCCGAGTGGGCGGGNCGCCTCCTGCGGCAGGCCCG
GGGCCGAGCGAGGCCCGGGCGGGGCGTCGCCGGCCGGAGGTCCCCGGCTG
GCAAAGTGACCGAGAAAAATCCTGC
>rnd-5_family-6929#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
CTCCCTTTTATATGGTGATAGCATCTTCATTGTTATTTGAGAAATAAGCT
CTCTCCTGTTTCAGTGCATGAAGTTTGGGGCAGATGTGCATACCCTTAGC
TCTAGGGGCGAGCATGCCACACAGGTTTGACCCATCAGCAGAGGCCAACC
ACTGGCCATACAGTGATTGGTTGAGAGATAGGCATGTGAACTAAGGNAAN
ANCCAANGAAATTCGATTCCGGGACATTGGTTGAAACTATTGGGAAAGAG
AAGTTCGCTNTCTGAGGAGGAAGCGCTCTTTCGGCTGTGCTTGCTAANCT
GATAGGATATAAGCCTAGAGTTGCCAGTGGNTATCTTGTCATCATCAGAG
AAGATTTCCTGAAAATGAACACAGAGGAAAGCAGAGCCAAAAATGAGAAG
GAGAAAGAGACAGAATGATTTAACGGTATCATTTGAGCNCCTGGATCCAG
CCATGCCTGAAGCCAGATCTATNCCTCTGGACTTTTCAGTTACATGAGCC
AATAAATTCCCTTTTTTAAGCCAGTTTGAGTTGGGTTTCTGCGACTTNCA
ACCGAGAAGANTCCTAATTAAGGATNTTTCACCAAATGT
>rnd-5_family-5392#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
AATCTGCCTAGATANCAGAGATTCTGTATCTTACTAGAATAATTTTCTGT
GCTTTACGTTNACTTTATAATGTCTTTGTTTTATTACTAAAAAACAAAAN
ATTTTCTAGCTTCGNAAAGAGCGAAGATTCTTTANAATCGTGTAATCTCC
TATGTTTACTTTCAAAATATTTTGTTGTCATTTTGATTAATAGGTAACCA
ANTATTATTTCTCAGGAACCCATGATCCTATCTTAATCAAACGTTCAAAT
TTCCTGACAATTTTNATATTTCGCCTTCCATAAAATTTAAATCTAANTAA
TAAAATAACTTTTTATTCGTTTAAAACCTAAATNCTTTGAGATTTCCCAG
AAGGCTCCTNGAAAATCACAAANGATTTNTTCTTTCACCTCATAAAAGAG
AGGTGCTANAAATAATTAGGTTTATTTGATATGTTACTATTGATGAGTTG
CATGNGAAGAGTTNTCAAATCAGAAGAGATGCTTAGCCTTCTCTAGGTTA
AATTTGTATTAGGTAAAATGTTATTAATATAAATATTTCAGAAATTGTAT
GTTGTATGGGAAGTTCCTGAAGATTTGTCAGTGCCCTCGCTGTCCATGAT
ATGTTTCTATTCGTCAGAGTCCTGGTGCTGCTTTGCCTGATATTAAACGA
CAACAGTATAGTATTATCAGTCATAATTTCAGTTATTTTNAAAATGTCAA
CTTGGTTGCAACTTTACTTCTTTAATTCGAATCTGGCATCTTCCAGGCCA
NTGGNTTTTCGAATTGGAGATTCACATNACTTAACTGTGGAGTTTTATTA
AATATAGATGTTTAGGATCTACTCCAGACTTACNGAATCTCTTACTTGAT
TCATATTCTTGGTATATTCTAACTATATGCTNGGTATATTCATGGTATAT
CATATCTCAGGATTATTATATACCTNAAGATTTTTTCCTTTGTAAAGATT
ATATTNATCCATTTTTATAAATTAGATGTAATATTCACTNTTCTTTGAAA
ATANGNTTAATGACTATGTTTATAGATATTTTGTCTAATACTTTTTCGGA
TTGACTTTATTATCTTNTTTTGTATGCAACGAAATAAACAAATTTTTGTC
AGTTGCATTATTCTTGTAATAAACGTTCATCAGATCTTTCACTTTTGAAA
ATTATCAGTAATAAGTTAACCATAGCCATTTTAATCCTTTGTCATCNACA
NATAGTTTTTGTTTTACTCTGATGCTTTCCTGAAAGCACTTGCAATCAGC
TACAGGCCANAGTGCTTCGTCTTCAACAAAGAGGGACTGTCTCAGAGCCC
CATGGAAANGGACTATGCCAGGTNTTTTGGAGCTCATCCTTCTTAAACAA
CTTTGGGAACCATCGGTGACAGTCGTATTTCTAGAACTCTAACTGAGAAG
CAGATGGGTTCAGTGCCAACTAAGATGAAGCAGAACAATAATTAAATTAT
ACATNAGTGAANTGATGANAAATGATTGTGGNTTTTGCTTGGAGATGCAT
TCTGATNTTTTAATGTTCTGTTTTCCGGACATANAANNAGTCTTCTAATC
TTTTCTCNTAAGNTAAAAT
>rnd-5_family-6358#LINE/L2 ( Recon Family Size = 31, Final Multiple Alignment Size = 22 )
CTACTGCCTACTTGACGTCTCCACTTGGATGTCTCACAGGCACCTCAAAC
TCAACGTGTTCAAAACCGAACTCATNATCCTTCCCCCCAAACCCAGTNTT
CCTCAGGGNTCCTCATCTCAGTGAATGGCANNACCATCTACNCAGATGCT
CGAGCCGGAAACNTGAAATGTCTTAACANCTTCTTCTCCCTCNTCAAGCC
TCCCACACCCAACTCTAGCCATCCATTT
>rnd-5_family-7347#Unknown ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
AACCTCCCAAGTCATACCCAACATGGGCCTCCTCCCCTGTTCTAGCCCCC
GCTGGGAGATGCTGAGTGACAGAGGCTCAGGCTTTGGGTGTTCCTGGCAA
AGCCTCACCCCAGGAGCCCCACAGCTCAGGCCCAGTCCGTGGTTCACACG
GCCCCATTTCGTCCCCTTTTTCCCTTGAGAGCGATTTGTCCCTGGGAGAT
CCTGGATCCCTCATTCAGGTGCAGTGCTGTAGGGCAACACTTCTTCCCAG
GGGTGACCCAGGCCTGCAGGGTCCCAGTGTCACCGGCAGGCCTTGACCCG
GCCTCCACCCGAGCCCCTGCTCCTCCTCTCCCACGGGGAACATGACGTCC
TCTTCCCAGGGTACACCCACCTGCAGAGGGCCCAGCCCCTTCACTGGAGC
CACTGGATCCTGAGGTGAGCTGGGTGAGGTGCTGGGGCCGTGCTGGAGGG
GAGGACCCCGGCTGCCCTGACCCTCCTGCCCCTGGCTTCCCACAGCCGCG
CCGTGGCGCTGACCCTAGACTCTGAGCGGCTGCTGGAGGTGCGGAAGCTG
CATCTGTGTCCTGNCCCTGGGGAGGTGGGTGAGGCTCCAGNGCCCTAGGG
ATTACACATGAGCTGGGAAGGGCAGAGAGGGNTAGAAAATCAGGTTATCT
GCTCAGAGGGGGACCCTGCATGGAGCCCCAGCTCTTGCTAATGTGGGGAC
GTCCAAGCCAGTGAATGTGTCTGAGCAGGGCTGGAGCTCTTCAGTGAGGC
TCCTAGTGAGTCCAGCCCACTGCCCTCAGCCTGACATATGGGGACATGTG
TCAGGAGANAAGGGTCCTGCACCCAAGGTNACTCGGTGCTTGGGGATAAG
TGTTCTGGGGACATTAGGGGACAAGTGTTGTGCACCCAAGGCGACTGGGC
CAGGGAAGAGGCTGAGCTCCAGGCGGTTGCCCTGGCAACTAGGACTTCNT
TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCGGGC
TGCCTGCCAGGAGCCCTGGTCACCACGAATCCCTGTCCCTGCAGCGGGGC
CATTTCGGGCAATCCCCTGGGTGTGGACGGAGAGCTGCTCTGAGCAGGTG
AGATACCCTGCCCCTCCTCCCTAGGGAGAGTCACCCTCAGCACCCGCCAG
GACACGCAGACACACCAGAGGGAAGGGNGCCTGTGGCCCCTGGTGAAACC
ATCATTCATTGCCTATGGGCACTGAGCTTATCTAGGCCAGGGGTCACCCA
TGGCAGGGGTGCCTGGTACTGAGAGACTCAGGGCTCCTACCTCCCTCCTG
AGACTGTGGAAAAGATGCCTCCCCCCAGCTCCCACCCCACCCACCCTGAT
CCTCTTTCCAGGGGGAGGGGNCCAGGCAACCGTGGTTAGGGGAGAGGAGG
CACACTCCCTGTTCTCCAGCCCAGCCCTGCTTCCTCCCAACCCCCAGAAC
TCAACTTTGGTGCCATCACTCTTAACAGCATGGATGCCACCAGTGAGCAT
GACTCCGTGGGTGAGTGTTGGGGATCCAGTCCCCTGCCCTGTGCCTCACT
TCTGTCCCCCAGCCCAGCTTCTCTCCAGTCTTCTCCCGCCCCTGTATGGC
CAGACTGGTTGTGGCGGTGATTGTACAC
>rnd-5_family-9956#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GTAGGAAAACAGCCTGTTGCATGGCAAGAGTGACGCCATCTTGAAGCGAA
ACCGCCATGATGACCAATGTTTGACTCCTGCATACCAAGGTGTTCTGCAG
CAAGGTCTTTAAACAATGCCTGTAGCATAGATAACCCCTCATAAAGATGC
TTATCTAACCTCCCCAGTGGTCACGAGTTTCGCAAGAAAGTCTGAGACGT
GACCAGCTGCACATGTTTTACCCNAAAAGCTTGCTA
>rnd-5_family-405#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
AAAATTTGGCCCGAGGCTGTCTCCGTACTTTGAGTTCCTACGTAACAAAC
TGCAACCTAACTTAGTACGTAAACAAACCGNAACCTAACTTAGGAGTATA
TTCTTGTAACAAACAAGCTGAGTCTC
>rnd-5_family-7350#SINE/tRNA ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
TTCCGGCTGCAGCTACTCCGCTTCCGTGGTGGTCTAGCGGTTAGGACTCC
TGGTTTTCACCCAGGCGGCCCGGGTTCGACTCCCGGTGTGGGAACCAGGG
AATCCGGCTGCAGCTACTCCGG
>rnd-5_family-2238#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 21 )
TTTTTCCTTTCCAACTCGGGACCCTCGGTGGGCAGCGCCTAAACATGGAA
GCAACTGCAGGTTTCTGGCCGTGGCCAGTGAAACTGAGGGGTTTCCATGT
GGAGGAGCCTGACCGCCACCGCCCGGTTCGCTTAAGGGACCTGAGTCCTT
TTCCTTTCTTTTTTCCTTCCTTTCTTTTTCAGTCTTTCAGCGGCTGTTTC
CTAGTAGCTCCTTGGAAATTGAGGGCAANTGGCTGGGGTCACTCCTGGTG
CTGCCTGAAGGCCNAGGAGTGAATGGGGATAATTGCCCTGCCTCGAAGGG
GGAAGGACTTTTTTCNATCTTTTCCGGTTGTGGTCCCTGATCCCTATGCG
GTGTGGCGCAGCTCTGGGCGAACTCACACGCGTTTCAGGCGACTTAAACC
TTCTTTTCTTATGCTAAATTCTTCCCTTCCCCTACTCAACTGGCTAAGGA
CAAAAGAAACCCACCCAGCCTCCAGTTCCTATCATTAAAGTCCATGGCTA
TCNCTTAGTGGAAAGGAAGCATGGAAAAGCGCGGCCTTATCAAATTATAA
GGATGCTAAAAGTCGAGGATTNCACCCAGGGACAAAAGGAAAGCTCATAG
CAGGCCATTGCCTCTGGAGGGAAAACATGCANAGTGGCACTGGTGCCCAC
CTAAGGTCAGAGACGTCTGACACTCTAAGATTGGACCCCACAGAAGGACG
CTCTAGGGGTCCTGCGGACCTCAACCTGCCCAAAGGGGACGCTCTCGGCG
GAGGTTCTGAGGTCTAGTACTAAGCCCTCCTTAGAATTTTCTCTCGCAGT
TGCAATGCTGCTTGGCCCAAAACTGTTTAGAATCTGGTTTNCTTCTTCAG
TGGGAAAGCGGGATGGCATTGCATGTATCCAGGCTTTTGTGCTGCTGTTN
TAAGCAGGGTTGGGCCTGGTTAACGTGTGACGCCCTCCTTTGGTACTGTT
TGGCCCCAGTGTTCTTTGNAGTCTGGGGAGGTTTGGCCTTTAAAAATCAA
ACTGCCATGGAGACTGCTTTACCCAAAATTTTGGTTCACAGCCTTCCT
>rnd-5_family-1448#Unknown ( Recon Family Size = 26, Final Multiple Alignment Size = 21 )
GTCCTCCTCAGTCAAGGGAGGGAGATCATTAGTCTGTCAGCACTCCTNTN
GTGCGAAACTTCCTTCCCCAATACCAACCGCTGCTCCTTTGAGTATCCTT
CTGGGACNACTGGTGGGCAGTTAAGNTTTTGCCCCCAGAAGGCTCTGAAA
TGGGTCAGAACTNCANATTTAATTAAATTAACTCCACAAGACTGCTGATA
CTCAAGGCTGAAAATTCACTCCCTATTCTNTTTCCCATCCCAAATTATGT
CCAGCCGCATCTGTCCAACATACTCNTCGGAGATTCTGCAGTGAGATTAA
ATGACAACGTAAAGATACTCTAATAATAAAATGCCAACAACATNGAGATG
NCCCGAATTTGAATATAAACTCCTTTCCCATTATCAANTTCCCGAGGAGA
AATTAAAGTTCAAAGTCTAAATTCCCTTATTTTAAGTTAAGANCCAAAGA
AGTTAANGTCCAAATGACAAATTATCTTGCTTTTCGAGTTAAATCAAAAA
TTTCAAGTCCAAANAAATTAAAGTCGAAATTCATCCTNTCAATNTCTTAT
TCTGCTCNGTCTCAGCCAGAGGGNTTCTCGATGNCTGGGTGGAGCNGGGN
TTCCTTCAGCAGC
>rnd-5_family-6441#RC/Helitron ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
CAAAGCCTGAGTCCTGTCCTCTCGCTCTCCTCCCCGGGCAGCATGAGCTT
CACCACTCGCTCCACCTTCTCCACCAACTACCGGTCCGTGGGCTCCGTCC
GGGTGCCCAGCTACGGCGCCCGGCCGGTCAGCAGCGCGGCCAGCGTCTAT
GCAGGCGCCGGGGGCTCTGGTTCCCGCGTCTCCGTGTCNCGCTCCACCAG
CTTCCGGGGCGGCATGGGGGTCGGGGGCCTGGCCGCGGGGATGGCCGGGG
GTCTGGCAGGAATGGGAGGCATCCAGAACGAGAAGGAGACCATGCAAANC
CTGAACGACCGCCTGGCCTCCTACCTGGACAGAGTGAGGAGCCTGGAGAC
CGAGAACCGGAAGCTGGAGAGCAAAATCCGGGAGCACCTGGAGAAGAAGG
GACCCCAGGTCAGAGACTGGGGCCATTACTTCAAGACCATCGAGGACCTG
AGGGCTCAGATCTTCNCAAATACTGTGGACAACGCCCGCATCGTTCTGCA
GATTGACAATGCCCGTCTTGCTGCTGATGACTTTAGAGTCAAGTATGAGA
CAGAGCTGGCCATGCGCCAGTCTGTGGAGAGCGACATCCATGGNCTCCGC
AAGGTCATCGATGACACCAATGTCACTCGGCTGCAGCTGGAGACAGAGAT
CGAGGCTCTCAGNGAGGAGCTGCTCTTCATGAAGAAGAACCATGAAGAGG
AAGTAAAAGGCCTACAAGCCCAGATTGCCAGCTCTGGGTTGACCGTGGAG
GTAGATGCCCCCAAATCTCAGGACCTCGCCAAGATCATGGCAGACATCTG
GGCCCAATACGACGAGCTGGCTCGGAAGAACCGAGAGGAGCTGGACAAGT
ACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCACACAGTCC
GCTGAGGTCGGAGCTGCTGAGATGACGCTCACGGAGCTGAGACGTACAGT
CCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATNCGAAGACCAGCT
TGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACACCCTGCAGATGGAG
CAGCTCAACGGGATCCTGCTGCACCTGGAGTCAGAGCTGGCACAGACCCG
GGCAGAGGGACAGCGCCAGGCCCAGGAGTACGAGGCCCTGCTGAACATCA
AGGTCAAGCTGGAGGCTGAGATCGCCACCTACCGCCGCCTGCTGGAAGAT
GGCGAGGACTTCAATCTCGGTGATGCCCTGGACAGCAGCAACTCCATGCA
AACCATCCAAAAGACCACCACCCGCCGGATAGTGGATGGCAAAGTGGTGT
CTGAGACCAACGACACCAAAGTTCTGAGACATTAAGCCAGCAGAAGCAGG
GGACCCTTTGGGGAGCAGGAGGCCAATAAAAAGTTCAGAGG
>rnd-5_family-2061#LTR/ERVL-MaLR ( Recon Family Size = 31, Final Multiple Alignment Size = 21 )
AGAGAGCATCCGTGTTATCCTCGCCGCCAAGCTACCCNTTCNCGCTTNTT
CTGCCAACGGCACCCCGACTNACTCTAAGGAACTGCCCGTCCTCCACAAT
CCATGTGGTTTGNNCGGGCTGCTGCCATCTCCAGGTCCGGGGCGGAGGAG
GCACGTGACCCGGGCTGGCCAATCGGAGTACGCNTCCCCTCCTGGCCACA
GTGATTGGTCCAGGGNTGGNCACANGACCCGAGCTGGNCTAATGAGAGCC
AGCCCAGGGCTTTAGCTGGNGACTTCGGGGAAAAGGAGGCTTNCTCTTTC
TACGTGGGTNGCTNAGCTGGTAGTGAGCCTGGCTGCTGGCAGCCATTTTG
CTACCTNNGGGGAGAGCCNGCCTGAAACGGAGCCAGCGCAGGGGAAAGAN
AGCCAAGAGGCAGAGACAGAGTCCCTGCGCGTCATTTGAGCCCCTGGATC
CAGCCATGCCTGAAGCCAGNNCTACCCTGGGCTTTTCAGCCGTGTGATGN
CGNTCAATTAATGCTCCTCTTTTTGCCTCAATCCGTTNAGTTGGGTTTCC
TGTCACCTAATCATGA
>rnd-5_family-6663#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 21 )
AATATTGATTTCTTAGTTATTGATTCTCTTTTCTNNNATCCTNTCTGCAG
GTGATCTCGCATNGCATCTACCACTGTCNTTTATGNANCAATTATGCTGT
ATGAAACTCTGACTCAAATATCTNGTCCCAGCTCCGGACTCATATGCCGA
CAACTGCTTGGACATCTCCACTTGGATGTCCTATAGGCTTTCTAACCTCA
ACATGTCCAAAACTGAACTCATCATTTTCACTTTTCTNTCTAACTTTATT
CTTGTCTTCTCCATTTCAGTGAATGGCGCCACCATCCATTCAGTTGCTCA
AGCCAGAAACCTGGGAGTCATCCTTGACTCTTCCTTCCCCTCACTTC
>rnd-5_family-2553#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 21 )
CCAGACGAGACCTTGCTTCCGAGCTNCAGATCCATATTTCCAGCCGCCTA
CTGGACATTTCCACNTGAGGNTGTCTCACAGGCACCTCAAACTCAACATG
TCCAAANCTGAACTCATCATCTTTCCCCCAAACCTGATTCCCTCCNNCTT
TTGTCTTCCCCATCTCAGNGAATGGCACCACCNTCCACCCGCCNTNCCCA
GGCCAGAAACTTGAGGTCANACT
>rnd-5_family-1943#DNA/hAT-Charlie ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
TATCACACACTANACAATGTGTCGGCAAACTATGGCCCACGGGCCAAATC
CAGCCCGCTGCCTGTTTTGTAAATAAAGTTTTA
>rnd-5_family-7287#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 21 )
TCTTCATGACTTTGGAGTAGANAAGATTTCTTAAACACAAAGTACTAACC
ATAAANGAAAAGACTAATAAATTGGACTNCATTAAAATTAAGAACTTCTG
TTCATCAAAAGACANCATTAAGAGAGTGAAAAGGCAAAAATAACTGACAA
GGGCTCATATGAGCAG
>rnd-5_family-2790#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 21 )
TTGTAAGGGTGTCTGCCTCTGTACACTAGAAACTTACCATTGTTTTAAAT
TTACATAACAAGTCTTACCTTTGTTTAAGGTGCTTTTCTGGCCATCTCGT
CTTAACTGGGCCTTTACCTATACTCCTTTTTCCTTGGTTTGAGCAAACGA
TGGTACAATATTTAGGCCTAAAGTCTCAGCTCTGTGCTTTTGAGATATAA
ACTTTCTACCTTGTTTCACCTAAGAGTCGTCCCTTTAGAAATGCANATTT
AGGGTTGCCTAGCTAACAATTACTTAGGGCAATGAAACAGGTAATTGGAA
GATTGATAGTCTGAATGGGGAAAAGAAAAACTATTTGAAAGCTAGCAAAT
GAGAANTCTTTATGAAAGCTATAAGATCCGCTTCTGTCTGTGTGTCTGTA
TGTCTATATGTGTTATGTGTACGTGATAATATTTGGTAAATAAAGCTAGT
TTTAAAATTGTCGGTAAAATAGAAATGGCTTCAAAATTNTCAGTTAAATA
TAATTCGATACTTGCTTGATTTGACTGTGAGCTTACGTTTTTGGTTTTGA
GCCTNTGGATTCGGGGGTCCGGATAGGTGGCCGTGGTGAGNCTCANGAGA
CGTTCTCAGTGCCTAGACCAGCAGCTACAAGNCAGAATCAAGCCCANTAT
GGCCCCTTCTTCCCCTGCCCCAGCTTCGCCTCCTGGCTATTCTGGGAGGG
GTTCGATCCTCCAGGCNTCGTCTTCACAGCTCTGTCTTCTGTCCTGAGCT
CTACATCTGTATGTAAATTCAGGACTCAGACAGGCCCTGCCCTTCATAGC
CNTCCTGGGTGCCACGTGGCTACTTGGGACCCGGGATGACTGGGGAAAGA
CATTAGGGAGGNTACCTNTGTCACANCTTCGNAATTNTTTTCAGTAATTT
AGAA
>rnd-5_family-4058#DNA/TcMar-Tigger ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GTCTGTTCTGCTACAACGCATGTTTCTATAACACATAGCTCGTACGTAAT
TGGTAAATAGGGGAATGATGTCAGTANAATGTGGAAGTTGTGTTGGTTCA
TACGCGNTTTTTCCTAGGCAAGGGGAGCCGGAATAGCGGGAGTAGAATTA
TAACCTTCAGCGGGAAAGAAAAAGCCCTCAGCTTGGCTGCTGCATAGGCA
GGANCCTTTTCAGCCAGCATCCAGGGCTCCCTCCCCAGAGANGCGCAACG
CCAGCCTTGCACGGCTCTCCGCCGTGGCAGGTTGCGCTTCCCTCCTGTGC
CCACCTTAACGGCAGCCCCTACTGNCTCAGAGCTGCACGTCTCAGCACCT
TCAAGCCNGCATTTCCACTATNTTGTGCATTTAATATCCCCTGAGGCAGC
CTCCAGCCACACTGAGCTGCCTGCCTGGGCNGTCCAAGTTATCTCTCCAG
GTACCAATTATTGTTTTGGTTACAAAGTTGCATAGGTTTTGAGTGGTCTG
CCCCAACCCTATTTCTTGTTTTCCCATAAGCCCTGTTATTTTTAGAGCGT
GATTTTGCAGAACGCGAGGTTTTTCAGGAATGCGTATATTATNTTATAGT
AGAAACTT
>rnd-5_family-253#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 21 )
TGTGAAAGTTGCAGATACCAGGATGAAATCACTTTNGTCAGACCCAGACA
AAATAGGGCCGGGAAAGCACGAAGGAGAGGAGGCTCATGCTTACGTGTCT
GAGATAAGAACTGTTTCCAAGGACTTTCTAAAAACCCCCAAGAAACTCTT
CGCGTCCTTCACGCATCTCTGCTTTNATGACAAGGTTTATCACTAGACAT
TCTTTAGGACTGCAGTAATTCAGATAAGATGCTCTCAAAAGAACACTTGC
CCAGTAACGGCATCTCCACCAATGAACTGACANCAACTCCGGCNTTGAGC
CTCTGGAACCAATGAACTCTGTTTCTAAGCAGCTTATGTGAACCTCTTTT
GCCNNTAAAAGCTTCCCCTTACNCCTCCCTCNCCGGATGCACCTGTGGCC
TGCCATTCCATGCATCCCGGATTATTCTCTTCTTTCTACTCCCGAATAAA
CTCAACGTATTTGGAGATANTTGTTTT
>rnd-5_family-1025#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
GANCATGCATCCAGAACTGCCCATGGGGCGTTTCGTCAGACCCACCAAGT
CNTAAGGTCNGGTAGGCCTAGCAGCAGTCATCGTAAGATGGAAACGGTAC
ATCCGGAATCAAGCNCAAGCAGGACCAGAGNCACAGGCAAGCTGCATGAG
CAGGTAGCCCAGANCCCCATGTCACCCACCACNNCTGCACCAGTGCCCCT
CCCTCAGCTCACACTATGGCCGNATGGAGGGGTCCCTACGANCAGCTGGA
AGAGAAAGAAAATGNCCGAGCTTGGTTTACGGATGGGCTGNCCCGGTATG
TGGGTGCAAGCCGAAAATGGACGGCGGCTGCATTACAGCTCNCACTCAGG
GGTGGCCTTGAAAGACGG
>rnd-5_family-5517#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
TGCGAGTACCCCCATTTTTTCTAAGAGAAAGGGAATGAGTTATTATTTTA
AAATTATTTTCTCTTTTCTTCTCTCTCCTTTCCCCCGTTCCCCGCTTCCT
ACTTAGCCCTTTAGAAATGCAAATATAACCTTTCACCTCCCCCTCACCAG
ACATTCCCTGCAGGGCAAGTTCATCACTATGTGCTCCAAGACAGATCTCT
CCTTGAGAGTTGACAGTCGATTTGCAGACCAAAGTATGCCTCCNTGGAAC
TTTCACCTCCAGGGGGTNGCCTCGGAACTTCCACCCTCCGGGGATTGCCT
CAGAANNTTCATCCAGGAGGAGTGCCTACTGAAAGCATGCCCACTTGGCC
ACTTTTACAACTTACTTCTGCCCAGGAAGGCGCCAACTCAACTGCCCGGT
AGATAAGGCACCGAGCTAGCAGAGGGACCCCCGCCCTTGCTCACTTTCTC
CTACCTT
>rnd-5_family-3556#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 21 )
ACTCNTCTTCATCGGTCAGAGGTAAGCGAAGAGGATCCCAGCAACCCCCA
TCAACACCTTGGACACCTACAGACCTCGCCNTTGGGGTTCCCTGCAGTCC
TCACAGGCGCTAAGCCCAGCTGGGGAGCCCTAGAGTNCACATAGCTGTGC
TGCCTCCGAAGGAGTTAACGCTGTGCCCCGCCCCCTGTGGCCCGTGCGGC
TACTGCGCTATGCCATCTTGGAACTGGAACTACGGCTGAAGCGATGTCGC
TGCTCCGGAGTCAAGTAGCCACGGCTCCCTTTCATCCCTGAGGCTAAGCC
ACCACCGAACCACCCCAGNCCAGTGGCCCGACATCCCCAAGTCGAGCTGC
AAGCAGCTGTTACACCCTNCCCCGTGGGACCAAGCAGACGTGGAGCTACT
CCATTCTACTCCTNTNCCCTCCCCCTCGGGCCGGAGCTGAAGCGGCGCCC
TGCCTCCCGGGGAAACGGTACCTTGGCTGCTCAGAGCAGTCACTNCAGCC
CCCGGTGCCTAAGCTGAAGCAGCGCCCTGCATCCCGGGAAACGGTGCCTT
GGCCGCCCAGAGCAGTCACGCNCCCCAGTACCTAAGCTGAAGCGGCGCCC
TGCATCCCGGGGAAATGGTGCCTNGGCCGCCCAGAGCAGTCACGCCCCCC
AGGCCTGAGCTGAAGCGGCACACTGCCCCCTGGGGAANCGGTGCCTGGCC
GAGCTGAGCAGCCGCGCATCCCAGGGCTGAGCTGACGCGGCGCCCCGCGT
CCCAGGGAAACAGAGCAGTGGCTGAGCTGAGACACCTCGCCCTNCAGGCC
AAACAACCCTAGTACCCTGCTTCCCTGGAGCTGGACTAGCCCCCTGGAGT
CTGAGCTGCTGAGACACCCCTCTCCCTGGGGAGTGGAGTCATTGCTGTGC
TGTTTCTCCCCTGCCCCCCAGGGCCCAAACAACAGCTGTGCTCCGCCATT
CTGGGGTACTTGCTGCCGCTGCACCTGGCCTCACAGAGTCTGGGATACTG
CCGAGCCCCACCATCCCAGGGTCTAGAGTCACTACACGGTGCCTCATCCC
CTGGGACCCGAGTTGCCACTGAGCCCTATTGGCTCAGGTTCCCGAATTGC
AGCCATACCCTGCTCCCCGGGCCCAAACCTCCAGAGCACTCCTTCTTCCC
CGGAGTCGGGCCAGTGCTGTGCCCTGCCCCCCAGGGGTAAGAATCACAGC
TACAACCCGGCCTGAACGCTGCTGGTGCCTCAGAGTCACAGATCCTGGCT
CTGTGGGCAACCTACATCCAACCCTGCCACAGAGAGTGAACCTGCACCCC
AAGACCCAGGTGCCACAGTAGGTTCGCGAGACCCTGAGCCTAGGACCCCG
GCCCCGCAGCCGCTCCGAGCACCTGCACCTGGAACCCAGTGCCACGGCAG
CTGCTTGTAGGCCATGTCAGACCTGACACCAAGAGGGATCCCCTCAGCTA
AGTCTCCCCATTGTGGGGAAAACAAGAATAGGAGGACCCCAAAAGCCCTT
GACACCGAGGACATTAACAACCTACGCTGCCACCGCTACTGNCANAAACT
TCTATGGC
>rnd-5_family-3304#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 20 )
GGCAGCGGCGGGCCATCCGGAGCGGCCGCTGCCATCGCGCCGGCTGCAGC
GGGGAGGACGCAGCGGTGGCGGCAGGAGCGGCTGCGGGAGCAGCAGTGGC
GGCGGTGGGTCCCCTGTGCCCCGCGTCCCCGAGGCAGCCGACTGCGCCGC
CCCCACCCTCGCGCGGCCGGGCGGGACCTCGCTCCCAGGCCCGGAGCCTC
CGCCGCTCCGGACCCTGGCCCCGCGTCGCCGCTCTCGCCCGCCGCCGCTG
CGGGGAGGGCGCGGGGAGGAGGCGGACAGTCCCCGGAGCCCGCCGCCCCA
CTGGGAGCCCCCCGGGAGCCCGCCACCCTGGGGGCCGCCGCGATGGGGCT
G
>rnd-5_family-2517#Simple_repeat ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
TGGCANANATATATATACATACATATATGTGTGTGTGTATATATACATAT
ATACATATATGTNTGTT
>rnd-5_family-782#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
TTAGAGATATTCCCCACTCTTGCATGAACAGGGCATAAGAATCCAGCGAG
GCCTGTGGTCCTGCGTCCTTTAGGAATGGTGCCCGAGGCTTGATCCCTAA
ATGNCTCTTGTCCGGGNATTGCTGTAGAGGNTTCTGGTTGCCTGATGCCA
GACTATAAGGNTAACGAATCCTGCCTCTGGAATGTTTNGTGTCTGCTCCT
AGCGAATCTTTCAGTCAAGATGGTGAGTGGGACACTAAAGAGACAGAGCT
GGGACTTCATTGAGCTTACGAAACAGATTGTATGAACTATTTTTGTGCCT
GCTGCTAATAAATGTTTGTTTAATAAATGTCTGCATGTGTGGCAGAATTT
GGTTTGAGACTTGCTTTCTTTATAACCTGGTAGCAAGGTNANGGAAGCTA
ACCCTTACCCTCGCAATGCTACTGTTACCTACCAAAAAGAACCTAAGAGT
TGTGCGTGANCAAATTG
>rnd-5_family-7782#Unknown ( Recon Family Size = 24, Final Multiple Alignment Size = 20 )
GATGGCACTTTTANAAAGATTGTTTTCGTTTTGAAAATATTTCCCATGAG
AAGAAAGCAAAGAATAATCCCCTGACACTGTATAACTNTAANTNTCTCTT
TTCTTTTTATCTTCCCTAGGCACAGANATCTTATCAAAATGTTTTCGGGT
CAAGGTTTCCCTTCGGAAACTTTATGGGGCGATGTGTCCTCAGCCACCCT
GGTCTTGGGTTTCAGTACTGTNTNGGGATAAACCAAGATACCCGCCATGG
NCCGCTAGAGTGTCTAGTGAATATCACTCCTGGTCATTTTCTCTCATAGG
ACAACCTGAGGCATGAGTGTAGCCTCTCGAGAAGCAGATGAATGCTCTGG
GGCTGAAGGAATNTCCTGNTGTATTCTNTTAAGCTAATTCCTTGAGANAT
TAAAATTGTCTTTACCNAACCCAGCTTTCATTTCTTGGGGACACATTGCT
GGTCAGCCAATCAGATGCTAGTATTGAGGAGAAAACACAGAAATAATTTC
TGCCTCCTGGATTCTTTAAGGGNGCAGAAAAATAATGCAATAAATGTAAA
GAAAAATATTTTAAAATTTCGTNGAAAAAAAAAAAGACGCCAAAAAGCGA
NCAAACAGACNAAACAAAAACTGACCCCAGNGAGATGGTNTAAGAACTTG
CAAAGTAAAACGCGCCTGGGGCANTCACTGGGGCATAGTGCAGCGTCTCC
TGAGCGGGTGGTTATTGAGCACTCAAGTGAGCAGGATGGGGTGGAGAATC
TCTGAATGGCCTGACTTGANACATGAGTCAGACACATCTGTNTCTTAATC
AGCACTGCCCCTCTGGGTTTGTCACCTTNAAAAGATTTGTTCACTTATTT
TGACCTCAGTTTTTCAGNTGTAAGTTGCATTNCATTAGCAGGGCTTGAAA
GGNAGAAAAGAAATTTGCAAAGGGCATAAAAGAGGTGGCTTTCATAAACA
AAAAAATATATCTAATTATATATTTTATTTGTTAAAAATTCTCATTTACC
TTTTTCTTTCCCAGTATGAGTTTTGAAATTTTCTCAGGTGAATTTTTTAT
GGCTNGGTGATTTCAAGCAGNATTTCAAGGCTTNGCTGTTCAGAATGCTN
GATACGAAGGAAAANANTAGGAGAAATCTCTCCTNCATCTTGGCTGTAGA
AAATGAATACNTTTCTACAAGAAAATGTGGTAGATAACTGGTGAGTTACG
TAGATTCATGAAAACATTAGTTCCTCTTTTTGCAGGGTAAATTTGTGACA
GTGAATATCTCTGTTCTATATCCCGTTACCTTGATTTCTGAGTTTCATGC
TAAATTTTTGTTGCCCTAGAAGTGTTCCCATATGACTAATTGTTTACTAC
ATGATTTTTAATGAAANTAATAAAATAATACATTTATTGTCTGAAAGGAA
TAGATGCNAGACANCTTAAAATTTCCTTCCCTTATATGAACACTGTTTGA
GTAATTTTGCTGAATTTTTCAAACACNNAGTTTAGTTTCAAAAACCAAGT
GAATAACTCTGGACATGGAAATTAAAGCTTGAGCCCAGTGACTCCGAGCT
AAGGCTAATATTGAGCCTGCAAAAGAGGTTATTAAAGGCCCAGTTAGTTT
TTTCTGGGAAGCCTCCCTTGCAGGTGTCCCAGCCTGCTCACCTCAGCCAT
GGAAGAAGCCTTTATACTGAGAGAAGCTACAGAGCCCTGGAAAGCTGGGG
ATCCACAGGCAGATGGAAGGGGACTGGGAGGGTCTTNCTGAAGATGAAGT
TGTTATTGTCTTGGGGCNGTTTCTAGACTTCGTAAAATAAAGCAGTTAGA
TTTAGGTAAAAGTAAAAATTGAATTC
>rnd-5_family-336#Unknown ( Recon Family Size = 23, Final Multiple Alignment Size = 20 )
ATGACACAGGNAGAATTTACTACAAATCGGTCAGAAATGCACTTTCAAGG
TTAAAAGTAGACACAGGCNTCTAGCCAAGGCACACTGCTAGGAACTAAAC
ACATGAGAGTCCAGGGAAGCTTTGGGATTCTAGATGCAGTTGAAAATCAA
ANACATGTAGAGCTCGATNGAGAAGAGGCCATCATAANGCAAGTNNACGG
CAGAAAANGTCACCANGAGAGAGGAGATGAGACTTGAGTGTNCACTANGA
GGCNGGGGAAAAGCCTGAAGAGGCAACGGTGAGGCAGGAGCCGAGGTAAG
AAGGNCCNCTGTAAAACAGAAGCTGCATCTTCAGAGGCAGACGTNACNAA
GCAGATGGTCCGGGAGATGCCAGTGTGTACACAAAGAAAGGCNTGCCAAA
ANGGCTGAAAAACAGGTATNAAGTAGGCCTNGGAAGGCCCACGTAAGATA
ATNGCTAGGCTCTGAGAGACTGCTTTGAGGAACGCGCTGGGNCTGTCTGG
ACCACCGTGAGGCCNAAGGAGGGCCTGAAAAGCCCATTTGAGGAAGGCTG
AGGCGTACAGAGGCCGCCGGGAGNTGGGGAGGAGCNGGGCCCACAAAGGT
CGTTTTTTTGCGAGGCAAGAGNTGGGCCTGTAGACACAGCCGGGAGGAAG
AGCTGGGCCCCAAGAGGCCGACNTGAAGACGTTCTGGGCCGGGAGAGGAT
GCCAGAAGGCCAATGCTGGGCCCGGGAGGGCCACCGGGAGGCACCGGCTT
GGCCCGANGGGGCCACNGGGAGGCCAGGGGCTGGGCCTGTGGATACAGGC
TGCCACAGAGGCAGGAGCTGGGCCTGAGCGGAGGCCACGGTGAGGCCACG
AGCTGGGCCTGGAGGGTCCACTGAGAGGCGGAGGCTGGGCCTGGAGGGGC
CTAGCGCAGGCAGGAGCCGGGCCTGGGGANGCCGGGCCCAGAGAGGAAGC
TTCGGGCCTGGACAGGCGCCAGGGGGGGGCCCTGGGAGCAGAGCTGGGCC
GGGAGAGNCCGCTGCGAGGCGAGAGCTGGGCCTAGACTCGAGGCCGGCGC
GAGGCGAGAGCTGGGTCCGGAGAGGTTTGCCAGAGGCACGAGCTAGGCCC
CAACAGGCCAGTGTGAGGGNGGCGCTGGGCCTGTGGACGCAGCCGGGAGG
CAGGCAGGCAGGCAGGANCTTGGCCTGGGGAAGCCACCGGCAGGCAGCAG
CTGGTCCTGGGNAGGCTGCNGGGAGTCCAGAGCTGGGCCCGGAGAGGCCA
CTGTCAGGCANCAGCCGGGCCTGTCAAGGCCACCGGGAGGCAGAAGGNAG
GCCGGGAAAGCCCCACTTGAGGAAGCTTCGGGCCGACAGAGGAAAGGCCG
CCGAGAGNTGGCCAGGAGCCGAGCCAAAAGAGGCTGCCGGGAGCCGGAGG
ATCCGGGCCTGGGGAGGCCGCCAGTACAGAGAGAGGCAAGGCATGGCCGG
AGAGGCTGATGGGAGGCAGGAGCTGGGCCCGGGGAGGCCGTCGGGAGGCA
GGAGCTNGCCCTGGAGGGGCCCACGTGANGACGTTTTGCACCCATGGGGA
GGGGNCGCCAGGAGGGCAGGAGCTGGNCCTGGAGAGGCCGACTTNAGGAC
CCGATGCTTGGGCCTGCCGAGGCCAGTAGGAGGAGGCCGGAGCCGGGCCG
GGAGAAGCCGACTCGGGGACATCTGGGGCCTGGAGACGCCCTGGGAGGGC
AGGAGNTGAGCCCGGAGAGGCCANCGTGAGGCATGAGCCGGGTGGGCCTG
GAGAGCCTGAGTCGATGGTCTGAGCTTTCGGGCCTACAAAGGCCGCCGGG
AGCTGGGCAGGAGCCGAGTCCACAGAGGTTGCTGCGAGGCGAATTCGGAA
GTTGGGCCTGTAGACGCAGCCGNGAGGAGGAGCTGGGCCCCGAGAGGCCG
ACNTGAAGACGTTCTGGGCCCGGAGAGGATGCCAGAAGGCCAACGCTGGG
CCCGGGAGGGCCGCCGGGAGGCACCGGCTTGGCCCGAGGGGGCCACGGGG
AGGCCGGGGGCTGGGCCTGTGGATACAGGCTGCCACAGAGGCAGGAGCTG
GGCCTGAGCAGAGGCCACGGTGAGGCCACGAGCTGGGCCTGNAGGGTCCA
CTGAGAGGCGGAGGCTGGGCCCGGAGGGGCCCGGCGCAGGCAGGGGCCAG
GCCTGGATTGAAGAATNTGGGCCTGGACAGGCCGCCGGGAGGCAGGAGCT
GGCCCGGGAGAGNCCGTGANAGGCGTGAGCTGGGCCNAGACAGGCCGGTG
CGAGGGAGGACCTGGGCCTAGCTAAGACTCCAGGNCAGCGCGAGGTGAGA
NCTGGGTCTGNAGAGGTTTGCCAGAGGCACGAGCTGGGCCNCAACGGGCC
AGTGCGAGGGAGGCGCTGGGCCTGTGGACGCAGGCAGCGGGCGGCAGGCA
GGATCTTGGCCTGGGAAAGCCGCCGGCAGGCAGCAGCTGGTGCTGGGTAG
GCTGTGGGGANNCCAGAGCTGCGTCCGGAGAGGCCANTGTCAGGCGGTAG
CAGGGCCTGTCAAGGCCACTGGGAGGCAGAANGTAGGCCCAGAAAGACCC
ACTTGAGGAAGCTTCGGGCTACAGANGAAAGGCCGCCGGGAGCTGGCCAG
GAGCCGAGCCAAAAGAGGCTGCCGGGGGCAGGACGTGGGCCCGTAGACGC
GGCCAGGAGGAGGATCCGGACCTGGGGAGGCCGCCAGGACGGAGGCAGAG
GCTGGGCCTCCTGGAGAGGCTGACGGGAGGCAGGAGCTGGGCCCACGAGG
GCCGTTGGGAGGCAGGAGCTGGCCCTGGNGGGGCCCACGTGACGANGTTT
TGCGCCCATGGGGAGGAGNCGCCAGGAGGGCAGGAGCTGGGCCTGGAGAG
GCCGAATTCAGGACCCAATACTGGGCCTGCCGNGNCCGGCGGGAGGAGGC
NGGAGCCAGGCCGGGAGAAGCCGACGTGAGGAATGTCTGGGGCCTGGAGA
TGCCCTGGGAGGGCAGGAGCCGAGCCCGGAGAGGCCACTNGTGAGGCATG
AGAAGAGTGGGCTTGGAGAGCCTGAGTCGANGGTCTGGGCTTTCGGGNCT
ACAAAGGCCACCAGGAGCTGGGCAGGAGCNGAGTCCACAGAGGTTGCTGT
GAGGCAAGTTCGCATGTGGGCCTGTAGATGCAACNGGGAGGAGGAGCTGG
GCCCGGAGAGGCCAANNTGAAGACGTTCTGGGCCCGGAGAGGATGCCAGA
AAGCCAACGCTGGGCCGGGACGGCCGCGGGGAGGCACCGGCTTGGCCTGG
AGGGGCCACTGGGAGGCTGGGGGATGGGCCTGTGGANACAGGCTGCCGCA
GAGGCAGGAGCTGGGCCTGAAGAGTCCCGTGNGAGGCGGAGACTGGGCCT
GGAGGGTCCGCTGGATCGGAGCAGGGCCTAGAGGCCTAGCGCAGGCAGGA
GCCGGGCNTGGGGAGGCCGGGCCTGAGGAAGCTTCGGGCCCGGACAGGCC
GCCGGGAGACAGGAGCTGGCCCGGGAGAGTCCGTGAGAGGCGTGAGCTGG
GCCNAGANAGGCCGGTGCGAGGGAGGACCTGNGNCTGAAGAGGGTGGCTT
GAGCAAGCTCCGGGCCTGGACAGCCTGTCACGAGGCNAGCGCTGGGTCCG
GAGNGGTTTGCCAGAGNTGTGAGCTGGNCCNNATCGGGCCAGTGTGAGGN
AGTCACCCGGACCTGTNGANGCNGCCGGGAGGCAAGCAGAGAGTTGTTCA
GGGATGAGAGGCCTCCATGAGGCCTGAAAACAGGTATACTGGGTATCCCT
GAGAGAGGCCACTGGGAGGNGGGAGCTGGGCNTGGAGAGGCCACTGNCGC
TCAGGAGCTGGGCCTGTCNAGGCCATTGGGAGGCTGAAGGTGGGCNCGGA
GAGCTTGACTTGGGGCAGTTTNGGGCCTANAAAGGCCACCAGGAGCTNGG
CAGGAGCTGAGCCGAAAGAGNTTGTCCTGAGGCAGGTGCTGGNCCTCTAG
GCACAGCTGGGAGGAAGAGCTCGGCCTGTGGACATTTTCGACCCAAATAG
GTCACCCAGAGGCAGGGGCTGGGCACTGGAGGGGCCTACCGCAAGGNAGG
AGCCGGGCCTGGTACAGGNCGNCAGGAGGCAGGNNTTGGGCCTCGAGAGG
CCACTGNGAGAGCAGGANCTGGGCCTGTGGAANGTGGCCANGAGGAGGAT
CCGGGCCTGGA
>rnd-5_family-3287#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
GCCAAGTTAGGCCATCACGATGCTCCCTCCCNGAAATTTAANTCTTGAAC
GGAGAGACAGAGACTGAAAATGNCTAGAAGTTAGTTCATCTCCAAGCGGC
AGCGTCCNGACCAGATTCCTCCTGCCACGGGACCTGTCCTCGTTTCCNGC
CCCTTGAGACGCCTCGGCTNCTGCCNGTTCCTGCCCGTTTCCAAGCCTGG
TTCTCCAGCCTTCCTTCGATTCTGTGAGTTGCTCCNTAATNTTCTTCCAA
TAAACTCCTCTTTTGCTTAAGTTAGCCAGAGCCGGTTTCTGTTGCTTGCA
ACCAAAGAACCCTGAAAC
>rnd-5_family-6464#SINE/5S ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
ATGGGAGCAGGTTCCCGCTCCNNTCNCACNTTCTCCTGCTTGCCACAACG
CTTCCCAACTGANCCCTGACGCTCTGGCCTTTTCTTTTAAAAATCTCCGG
CACGCCCTGCCTCTGCCGCGNCCCGGGGCNTNACCCAGTGNGGTCCGTNC
CAGCAGCCNCGGGGCGCCANAGNANNCTGAGGGTNCCCCGGCCTAGAANC
TAAGCAGGGTCGGGCCTCGCTGGGGCTTGNATAGGGGNCTGCCTGGGNAG
ACCGNGGNCCGGAGGCTTTTGGCTTCCCGCTCCCTTCCCGCTTTCTTCTG
CTTGTCACAACGCTTCCCAACCGCCCGCTNACTTTCTGGCCTCCTTTTTC
CCGCCCACCTNCGCCCCCACCGTGGCCCNGGACCTTCCCGTGGGGTTCCG
TCTAGGCAGCCNCCGNACGCCATAGCAGTCTGAGGGTCAGGGGGTGGTTG
AGAACTGTTGTTACAAGNGGGAAAAGNCGGAAAAGAGCAGGAAGCCAAAA
NCCTCNAGGCCCGGTCTTTCNACGTGGTCCCCATCCAAGCGCCAGCCAGG
CCCGATCCTGCTTAGCTTCCGGGCTGGGGAACCCCAGTCTGCTATGGCGA
CTGGGGCCTGCCGGAACGAACCCCCATGGGGAAGTCGCAGGTCGAGGTGG
GGGCACAGGCGGGAAGAAAGTGGGGGTCAGAGAGTCAGAGGGCAGTTGGG
AAGAGTTGCCAAAAGCGAGGGAAAGCGGGAAGTGAGCAGGAGGCCAAAAG
TCTCCAGCCACTGGACTCCNCAGGCGGTCCCTTATCTAAGCCCAGCCATG
CCCTANTCTNCTCAGCTTCCGTGCTGGGGCGCCCTCAGNCTGCTATGCCG
ACCGGAGTCAGCCGGGACGGACCCCCACGGGGAGGTCCNAGTATGTTTGG
GGCACAGGTGGGCAGGAAAGGGTGTCCAGAGAGTCCGGGGGCGGTTAAGA
AGTGTTGAGGAAAGTGGGAAAAACGGGAGCCAAAAGCCTCCAGTCCCGGT
CTCCCCAGGTGGTNCCCCGTCCAAGGCTAGCCAACCCGGCTTAGCTTCCG
GGCCGAGGCACCCTCAGGCTGCTATGGCCGACGAGGCCTGCCAGGACAAA
CCCCNACAAAGAGGTNCCGAGCTGCAGTGGAGAACTCAGGGGGCAGGGGG
GCCGGAAGCTAAGCAGGGACGAGCCTGGCAGAGNCTTGGATGGGGGACCG
CCTGGAAAGACCGGGGCTGGAGGCTTTTGCCTTTTCATCTTCTTCAAGCT
TTTCCCTGCTCGTCCCAATGCTTCCCAACTGCCCCTGACTCCTGTCCCCC
CTTTCCTCTTGCCTACACCCCCGCCGAGGCCCAGGACCTCCCCATGTGGG
TTTGTCTCGGCAGCCCTAGGCGCCATAGCAGCCCTAGGGCGCCGCAGCNC
GGAAGCTAAGCAGGGTCAGGCCTNGCTNGGGNTTAGATGGGGGACTGCCT
GTAAAGACCAGGNGCTGGAGGNTTTTTTCCTTTCGCCTTCTTCAAGCTTT
CCCCCGCTCGTCCCAATGCTTCCAACCGCNCCCTGACTCTNCGTCTCCCG
TTTCCCACTTGCCTACGCCCCCGCCTGGCGGGACTCCCCGTGTGGGTTCG
CCTCGGCAGCCCCCAGGNGCCATANCAGTCCTAGGGCGCCACAGCCCGGA
AGCTAANCAGGGTCTGGCTTGGCTGGCGCTTGGATAGGNNACCGCCTGGG
GAGACGGGGGCTGGAGGCTTTGGCTTCCTGATTCCTTCCTNCTTTCCCCA
CTTGTCGCAANGCTTCCCAACCGCCCCCTGACTCTGGCCCCCTATCTTCC
GCCNGCCTGCACNCCCGCCGCGGNCCGGGACCTCCCCGTGGGGGTCCGTC
CCGGCAAGCTCCCAGGCGCCGTAGCANCCTGAGGGCGCNCCAGCCCGGAA
GCTAAGCAGGGTCGGGCCTGGCTGGGGCTTGGATGGGGGACCGCCTGGGG
NGACCGGGGGCTGGAGGCTTTTGGCTTCCGGCTCCTTTCCGTCTTNCCCT
GCTTGTCCAAATGCTGGCCACTCTTCCCAANTGCCCCCTGACTCACTGGC
CAGCCTTTTCAGCCTGCCTGCGCCCAAGCCACGGCACCCGGGACNTCCTT
GTANGGGTCTNCCTTGAGNAGNCTTCGGNTGCCACAGCANCCTGAGGGTG
CCTCAGCNCGGAAGCTAAGCAGGGTNCGTCCCGGCTNGGNCATGGATGGG
GGACTGCCTAGGGAGACCAGGGGCTGGAGGCTTTTCGCTTCCAGTTCTCT
TCCCTAGNTTTCCCCCGCTTGTCGCAANGNTTCCCAACNTTCCCCTGACT
CTCAGGCCACCTCTTTCCTACTCCCGCATGCTTGTGCCCCCNCCGCGNCC
TGGGACNTCCCTGTAGGGGTTTGTCCCGGCAGCCNCCGGGCGCCATAGCA
NCCCGAGGGCGCCNCAGCCTGGGAGCTAAGCAGGGTCGGGCCTGGNTGGN
GCTTGGATGGGGGACCGCCTGGGGAGAGCGGGAGCTGGAGGCTTTTGGCT
TCCCGCNCCCTCCCGTTTTTCTGCTTGTTGCAACGCTTCCCAACNACCCG
CTAACTCTCTGGCCCTCCCNTTTNANCCCACCTGCTCCCCGCTGTGGCCA
GGGACCTCCCCGTGGGTGTCCGTCACGGCAGCTCCTCAGGCGCAGTAGCA
GCCTGAGGTCGCCCCCGCTCAGAGCTAAGCGGGGTNGGGACTGGCTGGGA
CTTGGATCGNGGAACACCTGGGGAGATAAGGGNCTGGAAGCTTTTGGCTT
CCCGCTCCCTTCCCNCTTTCTCCCGCTTGTCGCAANGCTTCCCAACCGCC
CCCTGACTCTCTCCCCCTTTCTTTCCGACCCTACGCCCCCGCCGCGGCCT
GGGACCTCCCCGTGGAGGTCCGTNCAGCAGCCCCCGGGCGCCGTAGCAGC
CCGAGGGCNCCCCAGCCTGGAAGCTAAGCAGNGTCGGGCCTTGNTGNGGC
TTGNACGAGGGACCACCTGGGGAGACCGGGGGCTGGAGGCTTTTGGCTTC
CCGCTCCTTTTCTCTTNTTCTCCCACGCTTGCCGCAACGCTTCGNAACCG
CCCCCTGACTCTCTGGCGTTCCCTTTCCCGCCNGCCTTCCNCCCACCGTG
GNCCGGGACCTCNCTATGGGNCTCCGTNTANGCAGCCCCCGNANACCANA
GCNGTNCGAGGGCCAGGGNGCGGTTGAGAANTGTTGNNANAAGGGGGAAA
GAGGGAAAAGAGCAGGAAGCCAAAAGCCTNNAGGCCCCGTCTTTCCACGC
GGTNCCCCATCCANGCNCCANTNAGGCCCANNCCTGCTTAGCTTCTGGGC
TAGGGTGCCCTCAGNCTGCTNNGGCGACGGGAGGTCTGCCGGAACGGACC
CGCCACGGGGAAGTCCCAGNNCGAGGTGGGGGCACTGNCGGGCGGAATAN
NGGAGGTCAGGGAGTCAGGGGGCGGTTGGGA
>rnd-5_family-9354#LTR/ERVK ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
TTTCTGCCCGTGGACGCCGCCGAAGAAGCATCGTTAAAGTCTCTCTTCTC
CCTGCGATCATGTCTAAGTCAGAGTCTCCTAAAGAGCCGGAACAGCTGAG
GAAGCTCTTCATTGGAGGGTTGAGCTTTGAAACAACCGATGAGAGCCTGA
GGAGCCATTTTGAGCAATGGGGAACGCTCACGGACTGCGTGGTAATGAGA
GATCCAAACACCAAGCGCTCCAGGGGCTTTGGGTTCGTCACNTATGCCAC
TGTGGAGGAGGTGGATGCAGCCATGAATGCAAGGCCACACAAGGTGGATG
GAAGAGTTGTGGAACCAAAGAGAGCTGTCTCAAGAGAAGATTCTCAAAGA
CCAGGTGCCCACTTAACTGTGAAAAAGATATTTGTTGGTGGCATTAAAGA
AGACACTGAAGAACATCACCTAAGAGATTATTTTGAACAGTATGGAAAAA
TTGAAGTGATTGAAATCATGACTGACCGAGGCAGTGGCAAGAAAAGGGGC
TTTGCCTTTGTAACCTTTGACGACCATGACTCCGTGGATAAGACTGTCAT
TCAGAAATACCATACTGTGAATGGCCACAACTGTGAAGTTAGGAAAGCCC
TGTCAAAGCAAGAGATGGCTAGTGCTTCATCCAGCCAAAGAGGTCGAAGT
GGTTCTGGAAACTTTGGTGGTGGTCGTGGAGGTGGTTTCGGTGGGAATGA
CAACTTTGGTCGTGGAGGAAACTTCAGTGGTCGTGGTGGCTTTGGTGGCA
GCCGTGGCGGTGGATATGGTGGCAGTGGGGATGGCTATAATGGATTTGGT
AATGATGGAAGCAATTTTGGAGGTGGTGGAAGCTACAATGATTTTTGGCA
ATTACAACAATCAGTCTTCAAATTTTGGACCCATGAAGGGAGGAAACTTT
GGAGGCAGAAGCTCTGGCCCCTATGGTGGTGGCGGCCAATACTTTGCCAA
ACCACGAAACCAAGGTGGCTATGGCGGTTCCAGTAGCAGCAGTAGCTATG
GCAGTGGCGGAAGATTTTAATTACTGCCAGGAAACAAAGCTTAGCAGGAG
AGGAGAGCCAGAGAAGTGACAGGGAAGCTACAGGTTACAACAGATTTGTG
AACTCAGCCAAGCACAGTGGTGGCAGGGCCTAGCTGCTACAAAGAAGACA
TGNTTTAGACAAATACTCATGTGTATGGGCAAAAAACTCGAGGACTGTAT
TTGTGACTAATTGTATAACAGGTTATTTTAGTTTCTGTTCTGTGGAAAGT
GTAAAGCATTCCAACAAAGGGTTTTAATGTAGATTTTTTTTTTTTTTGCA
CCCATGCTGTTGATTGCTAAATGTAATAGTCTGATCGTGACGCTGAATAA
ATGTCTTTTTTTTTAAAATGTGCTGTGTAAAGTTAGTCTACTCTGAAGCC
ATCTTGGTAAATTTCCCCAACAGTGTGAAGTTAGAATTCCTTCAGGGTGA
TGCCAGGTTCTATTTGGAATTTATATACAACCTGCTTGGGTGGAGAAGCC
ATTGTCTTCAGAAACCTTGGTGTAGTTGAACTGATAGTTACTGTTGTGAC
CTGAAGTTCACCATTAAAAGGGATTACCCAAGCAAAATCATGGAATTACT
GGTTATAAAAATGATTGTTGGCACATCCTATGCAATATATCTAAATTGAA
TAATGGTACCAGATAAAATTATAGATGGGAATGAAGCTTGTGTATCATCC
ATTATCGTGTGTAATCAATAAATGATTCAACTCTCTTG
>rnd-5_family-999#LINE/CR1 ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
TGCATTAACAAAAGCATGGAGACCACAACCAGGAAAGTGCTAGTTCCATC
CTGACCTGCACTTCTGTGACTACACANTGGGATTNTGTTCTGTTCTGGGN
ATCATATTTTAAGAGGAACGTTGACAAATTGAAACACTTCCACGGTGACA
AATGATGGTAAAGTGTCTGGAAACCATGNCCTATGAGGACANTGAAAGAA
CTGAGAATGTTTAGCCTGGAGAAGAGAAGACTTAGCAGGGAGANGAGAGC
CATCTTCAAATATTTGAAGGGCTGTCATGTGGAAGAAGGATTAGACTTAT
TNTTTGAGTNGCTCAGAGAGCAGAACTGGGACCAAATAGTGGANATTTCA
GGGAAGCAAATTTCAACTTAATGAGCTGAGCATTTTAGCAAGTAG
>rnd-5_family-52#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
ATGACAGAATGAAGAAAAGGATGANAGAATTAGTAGTAGANTCGGAATGA
NGAAATTACCTAATCTGAANAACGGNAGAGAAAATAGACTGAGAAAANAA
ATGAACAGANGCTCAGGGACCTGTGGAACNATAACAAAAGATCTAACATT
CGTGTCATCGGATGTCCGGAAAAAGAGAAAAAGGAAGTGAGACTGAAAAA
GTATTTGAAGAAANAATGGCCGAAANTTCCCAAATTTGGCAAAAGACATA
AATCTACAGATTCAAGAAGCTGAGCAAACTCAAACAGGATAAAC
>rnd-5_family-1743#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
GTGGAGTCCTGATAAGATAAGTAAGCAACAACGAGGAAGGGGCCCCAGGT
GGGGGAGAACAATTGTTCTGAGAGACGGCTAATCACAAACAACCCGCTGG
CACGACATCCTGTTCCCAAATACCTCCTTCCGCACATA
>rnd-5_family-2082#SINE/MIR ( Recon Family Size = 37, Final Multiple Alignment Size = 20 )
TAAATAGGAGAGCGGTGTGACANAGGAAAGANAAAAGCCATGAACTTTGG
AGTCAGACAGACCTGGGTTCNAATCCCGGCTCTGCCACTTAATAANCCTG
TGANCTTAACCTCCCTGAGCCTTAGTTTCCTCNTCTGTAAAATGGGGATA
ATATCA
>rnd-5_family-1130#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
AAAACATCTGAACAAACAGCAGCCGCAGAAAGAAATNTTATCTGAACTTC
TTCTGAACTTAAGCAGAGCCTCCCAAAAATACAGCTGCCATTGACCCCTC
CTCTCAGAGTTTCGGCCAGGGAAGACGGACCATTAGCACCAGGAAGTACA
AATNCAGCTGCCATTAACCCTCCTCTCGGGAGCTTCCTGATTCAGCTGCC
AGGAAGNANACCGCCCATTNCGCCCCATTAGCATCAAAAAGCCCAATAGG
ACCTTCTATACTTTCCCACTGAAGCCCTAAACCCCCTTCTCCCCTCTTTT
GTTAAGNTGGTATAAACCTTTACCTCTGGCTATTCAGTAAACTAACCCTT
ATNGAATNCTTCTGCGTGCGAATAAACTTTTCTCCTGTTAATCTGTCTNT
TGTCAGTTAATTTGCAGGCCCCCGANCACTTGAACCTAAGTNGGTAGAGG
AAAAATTTTCCTTCCA
>rnd-5_family-6631#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
ATTTTTTCTTTTCTCTCCTTCTCCTATTTTTTACATATCAAGTTGTTGGA
GGTTAACTTTACAATTTAGTCTTTAGGTAACAGAATATTCAGGCGGGACT
GTGACTGAATTTGAGGAGTAATTAATATAGCCAGCGATGGATACAATGAC
TNTTGGGACTGTGTGTCTCCTCATTTGGGGAAAGGGTGAGAACTTCCACT
TGTATGAAGGATAGCTGTATCTTGTTAGGTGGAAACATAGAGTTGTTTTG
TTGTTGTACAGAAGTTCAAATGTGTGTAGAAGGTGCATATGGAAGCTGAG
TAGCCAAAGGAGTGGATG
>rnd-5_family-7814#SINE/MIR ( Recon Family Size = 24, Final Multiple Alignment Size = 20 )
ATTGAAAACATTTTATTTTCCTTCTCCCCCCGCTCCTTTGGTTCTTCCCC
TTTCTCCTCGTGGCAGCATCCTCCGCTTAATCCTTGTTGCGTCATCCCCA
GCAGAATTGGTCAGACATTGCCCGTGTCACGGTCCTGACCATCTCCACGA
GGGGCTGTCCTTGTGAGCCCGNGCTCCTCTTCACTNNCCTGACCTCTCGC
AGTCGTGATTGCTTTCAGCTGNCCTGGCTGGCTTAGGAGAAAACCTAAGA
CTATGGAGNCCCAGAGCCAATCTCTGGCCTCTCTATCTCCAAGAGAGGAA
GAAAATAACAGGGATCTTCATGGAGAAATGACCCACGTGAGGGCCTGGAC
TCTCCAGCAGTCACAGCAGAAGAAAGTTTCTGAGGAAGAATGGAGGAGCT
GAGAGCCCAGGCTGGGAAAGCAGGGTTGTGTGAAACACTATTTAATCCTA
TGTGCTCCCTGCCCCAATCTANCAGCCAGTGAATGACAGCTGACCGAGNA
TAAATGCCAGGACTGTAGAACCGTGATAAAGGGTTTGTCCAAGGAAAGGG
NCTTTTACCGTTTTTGTTTTCGCGGTGGAAATTGCTATTTTTNATCCAAA
GTTTTCTGAANGGCAGCAGCGAGCTTCTGGAGGGTGAGTTACCTGCTCTG
CACAGGGAGGCTGAGGCCAAGGCTTGTGTGGCGGATCTGCTGCCACCAAG
CGGTGAGGGAGGGAGCCTGGGAGAGTCTCAGTCTTTCTGGGCTTCAGTGT
TTCCTCATCAGTAAGGTAGGGGCTTATTGTACCTCTCTGAGGTCCCTTCC
TGCTCTGTTTTCTCTGAGCTTCTGAGGGATTGAGATGNTTTTCAGTACTG
CCTGGGAGCTTCAGCTGAGACCTGACTCTGTGTGTCTCCTGCAGGAGCCT
GAGCTGAGCCTACACGCTGGAATCCCAGAGCTGCGGGAACAGGTGGAAGA
AAGAAAGTCAGCAGGTTTAGGGGATGAGAATAATCCGCAAAGGANAAGCC
ATTGGTAGATGAAAACCAAAGAAGGGGAGAATAAGGACAAAGCGGGACAG
AAGCCTCAGGGGAAATGGGCAATGCCTATGATCATTTAAACCCTCGAGGA
GCAGCGCGAGCTGAGCAGTGGGGACCGAGAGAGAAACTTACTCCACAGGA
ATCTCCTGCCTCTGGCCAGGGAGAGCCACAGGNTAGATCAGAGCTGGTTT
ATAGTG
>rnd-5_family-15392#DNA/hAT-Charlie ( Recon Family Size = 23, Final Multiple Alignment Size = 20 )
AAGGAACGATCCGGCCCCAGATGTCCGCAGTGCCGGCCGGGAGAAACTCT
GCGTTNATTATCTCGGGGAAAAAATCGAGTCNNCTCCCTGCTCACANCGG
ACACCAGGATAAACTCCCGATGGGGCAGACGGTGTAAACCAGGGGACCCC
CAGCTCCTGGGACTCNCCTCCTCTCTCCCTCCCCACTCAGGGTGTGGATT
TCAACGTGTGCAGCCTCCTGGGACCTCAGCAGGGCAGAGGATCATGGGAT
GCAGAGTCTCTTGGGGGTCCGTGGAATCCCCTAACTACAGGGGGGTCTCA
NCCTGGGGCGATTCTGCCCCCAGGAGACATTTGTGGCTGCCTCAGGATTG
TGGNGNCTGGCACGAGCGGCGGAGGCCAGGGGTGCCGCTCAGCACCCTGC
AGGCCCAGGGCGGCCCCACAGCCGAGGANGATTCAGCCCCAAATGCCCAC
AGTGCCGAGCGGG
>rnd-5_family-2166#DNA/hAT-Tip100 ( Recon Family Size = 33, Final Multiple Alignment Size = 20 )
AATTAACGAAACGTGAGACAAGAGCAATAAGGATGAGCAGNTAAAATCGA
CANTAANTCNTTTGGACATTGANAAGCAANTTGTNACAANACNCTTTCAG
ATCACATNANAAGCATAGTTCTTGGAGCAAAAGTTCGTGAGGTGGGTTAA
AAAAAAAAAGCAGTAATTCATTCAGAGGAAGAGATAAATTTCGAATAGAA
GTAATGAACAGGCTCTTGGATTGTTTGATGATCCAATTAATGAAGAAGAA
TGAATTACGTGAACACATTGGGAAAATATNTAAATTTCTTGCTGATTTGA
CATGAAATACTGACATCAGCGAAGATAATACAAAATTCACATTAGTACGC
CACTACAATGAGGACATCGACGACAAACTGGTTAATGAGTGNCGTCAATT
CAAAGAGTATTTAAGATTAGTCACTGCACAAGAAAACTTGAAATGCCCTG
AAATCTTACAGCTCATATATGAAAAAACTTGATAGAGGTTTTCCCAAATT
TGACAA
>rnd-5_family-4812#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TTAGGGACGAGCTGTGCTGCCTCAGAAAACCCCCTCCGCGCAGGCTGACC
CCTTCTCCCCATCTGATTGCTCTGCAGCTGCATTCCTGAACCCCTACCTA
GGCGCCACATCAAGGCTGCCAGACGTGCTACAATTAAGCAAAGCCTGATT
ACAGCCATCCGGGCAGCTCGAGGGAGGACAGGGAAAACATACGTTGGTTA
TCCATACTTGTAAATTCCTGTTTGACACATATCTGTAAAAAATCCTGGTT
TCTGTCTTTTTTTAAAGACTGCCGCCACAAAAGTCACAGGATGATGTATT
GTAGGTCTGTTACAAGTTAACAAACTATCTCTGTGCCTGTTACCAGCGGA
TAGATTACCTCAGTCCTGAAACTCCCTTATGCCCCTCTCACCCCATATAA
ACCCCTCGTTTTGTAAGCTCGGGGCTGCCTCCTCTGACTGTTACGGAGCA
GCCCGGCAGGTTAATAAAACTTGCTTGCCTGACTTTGGGTCTATTCTCCT
TTCTCTCGGCTACCCTTAC
>rnd-5_family-2168#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
AAAAAAAAAGGCCCAAAGGACAAGGTTCAGAGAGCTACACATGTGAGGGC
TGACAGGAAGCTGCAGAAGTACTTATCCACGTGCCGGGAGGGTGGCGCAC
CCCAACTCCACGGGGACAGAAGCTCCTGCGCTCGGGACCCTTCCAGACCT
CGCCCTATGTATCTCTTC
>rnd-5_family-720#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
CTTCGCATGCCCCCAACAGCGAAATCCANCGCTGCTTCCGTAGGAGGGAA
GTGCGAGCGGGCCATGCACCCCACGGCTGCCAGCCTCCACTGCTCCNGCT
GAGGAAGGGACTGGCCTTCCCCAGTGAAAGGCCCACAGCGCAGCCGCCCT
GCCCCCGCCTGAGCATTTCAGCTGCGGCCCGGCGTCCTTCTGAGAACCCA
GCCCACAGGCCTGTGATCTGCCCTNNGGCTCCCACCGCCTGAGCGTTCTG
CCAGATCCTGCCTGAGAGTTTGGCGCGAGGCAGTGACCAGCCCGACNCTC
CCGCCACAGCCAGCACCTGAACTCTGNNCTAGCCTGACCCTCCAGCCCNT
TTAAGACCATANATNCCGTACAGTGCCCATTTAGGGGCCTGGGAACTGAG
AAACTACTACCCCATTCCAACNCCTGGACCTAACCANTTCCNTCGGGGCC
TGAGNTCAGGCTAACCTAATCGACTNACACCGCCACGACTNACACCCACC
GCANAGGCCCAAAGATGGAGCCCTTCCTTCTTCTACACGAAGCAGCAGCA
TTACCACGTCGGAGAACAGGTGAGCCACAAAGCTGTCTGTATCGGGCTGA
GTGAAGAGGTTCCGCCCTGAAACCACTCCCACAGAGAGTCGCAAAACAGG
CATTTCCCGTGGCTCTCAGCCACACTGCGGTCTAGAGATAGACNACAGTG
TGCGTCTGAACTGGGAGTCACGAGCCCTGGAACAGGGGTGTGANAGGGAA
ACAGATCGTATTCCTGTCTATCTAGGACGGGGAGCCGATGCAGCCCCCTC
ACCCCCCCCTGCAGAGACCTCGGCGCGCTTCACCAGAATCCCTCATCAGG
GCTGGTACCCGCGCTCATCATTGGGGTATTTGTGGGTAAGCCAGGGGCTC
CAGCTCTGCCCAGCTNTGTCCCCTCTCACCCNCACGGAANAGGAAGCTCA
GGGCACCGGGNACTCCACTGTCCAGCCCNTCACCTGAAACAACAGAGAGC
ACCTCACAGTAAACAAAGATCAAGTNCATATCCACCTGCTTNTGCCGCAG
CTGGCTCNTACCTGTAAACGCCATCTACTGGCCNATAGATCAAACCGCAC
AGCCCAACANAAAACTTGCTGACAGAAGTGCATAGGACTATAGAAGCAAA
GCAAAAAGACCCTACCCAACACAATCCTCTNCAGACGAGAAGGAATCAGC
ATAAGAATTCCGNCACATAGAAAAATATAAACGTTGTGATATCACCAAAG
GCTNACTCTAGCTCTCCAGCAATGGNCCCTAACCAAAATGGAAGCTTNGA
AATGACAGATAAAGAATTCGAAACGTGGATTGTAAGGAAGCTCAATGAGA
TCCAAGANAAGGTCGAAAACCAACACGAAGAAAGCTGTAAAGCAATCCAT
GAAATAAAAGATAAATAGCTTCTTAAAAACTGGAAATNAATCAGAGCACC
TGGAACTACAAATCTCACTTAAGTAATTTTAAAATATAATAGAAAACTAC
AAAACAACCA
>rnd-5_family-327#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
CTATGTCCTAANCCCTGGAATCTGTAAATGTGACCTTATTTGGAAAAAAA
GTCTTTGCAGATGTAATTAAGGATCTCGAGATGAGATACCCTGGATTATC
CAGGTGGGCCCTAAATNCAATGACAAATGTCCTTGTAAGAGAAATACAAA
GGAAGAATGCAANAGCAGAGGAGAAGGCAACGTGAGACGAGGCAGAGATC
GGAGTATTGCGGCTACTGAGAAACTCCAAGAATGCCAGGACAAACANAAA
CTGGAAGAGGGCAAGAACA
>rnd-5_family-13796#LINE/RTE-X ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
GAGAANTTAGTGCAGGAAAAAGCTATTCGCTTCCCCTGAAGAACTGGTAT
GTTTCTTCTTATCAGATAATGAGAATTATGTAANTGACTCGTTCATTTCC
CTCTTTTGCTTTGGCCGCCAGGAAGCTCAGAGCCAAATTTAAATACTTTG
TAACTATGTGCACCCCTATGGCGTGCGTATTTGCGTCCTTTTTTNNCCTG
CCTCTTTTTTTCTTCCTTTTTTCCTTTCT
>rnd-5_family-984#LTR/ERV1 ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
ATCTGTGAACCTTTGGAAGACCTCCGCTATTTATTTAAAAGAATCAACAC
TCAGCCAGAAGTGGTAACACGATGCTGTGGGTGGGAANGGGAGCATTAAT
TTTTTTCTTCTTGACTGTAGTACTTCTTTTCTATCGCTTTAGCCAGCCGC
CTCCTCCTGGGAAACATCTCTTTTGTCCTTGTTGGGTATAGAGGCCACTC
TAAGGCCCAACCGGATACCACGCTGCCACTGTTAATCCTGTTTGCTCTCC
CAATTACCCTGATCCAGTGTGGGTGGGAACANAACTCTATAGTAAATATT
TCAAAAATTATAGCATCAGGGAATCATCTTCACGGTTGCTGGATTTGTCA
TCAACATCCCCAGGATAGAGAGTTCCACCTTCTGGCCCATCCGGAAAATC
TCACGGCCATNTCCCCAGACCTCCTAACTAACCATAGCGATCCCAAAGTA
CCCAGACCCCTACTTGTTAGGTGGAACTCTCCCCCACTTAACGGATTCCA
CCTGAACCCCCCCGCCACTATTACCTGGACCTGGGAAGTTGGGTATCTAT
ATCTCCAGTGCACTAATGATTCTATCTTTTGCACCCACTGTTGTGTTAAT
GACACAAAAGCGGAAGTTTCCCTGCGACGCTCTGATCCAACTCTAGTTGC
CAAGTTCCCAAGGCCGCAGCGAGGTAAATGGGATTCCACTTGTAAGCGAG
GAGACCATATATGGTGCCTTCTCCCAGATCAGAACATACAAAAAACAGGG
GGAAAAACAACTGCCTAATCTGGGAAGGTGGGAGTACCGCCCCCTTCTGG
AAAACAAAGATTGTTCGGCCACCCCCATTGGAACAGGGGAAAAATATCTC
TATAGACCCAACTTGGCAGCAAAGGATAGACATCACACCCCGTAGGGCCT
CTGTTTGTGCCCCAACTGGGCTCATTTTTGTTTGTGGCCATGAATGGGAA
GAAGTCACACCCCGTAACCACTCCCGACTCCCCAGGGAGCCACCTGTTCT
TTTAGGAGTAGCTTTCCTTGTATATCAAAAACTTGGAACAGAGGTGAATG
TACGTTGGCCACCCTTGCCCCTCCAGGGGTCACNGTCTATAACCCCATAA
GACCCAGGAATACCAGAAGTAAGCGAGCAATAGGATTAATTCTGGCGGGA
ATCGGGGCGGCAATAGGACTAGCAGCACCCTGGGGCGGCTTTGCCTACCA
CGAGTCAACCCTAAAGAACTTGACTCAAACCCTAGAATCCTTAGCCACCA
ACACAGGTCAGGCATTAAAGGGAATTCAAGAGTCCCTAGACTCTTTGGCA
AATGTAGTTCTTGATAACAGACTAGCGTTGGATTATTTACTAGCTGAACG
AGGTGGAGTCTGTGCAGTTATTAATAAAACCCGCTGCACATATATTAACA
ACTCTGGACAAGTTGAGGTTAACATTCAAAAGATATATGAGCAAGCTACC
TGGTTACATAGATATAACCAGGNCACTGACCCCAACTATATCTNGTCGAC
TATCAAAAATGCCTTCCCAAGTCTCACCTGGTTTTTACCTCTCCTAGGAC
CTTTGATAGCTATCTTGTTATTACTAATTTTTGGCCCTTGCTTGTTTAAC
CTCTTAGTAAAGTTTGTGTCTTCTAGATTACAACAGTTCCAGGTAAAGAC
GATGCTGGCACAAGGCTTCCAACCCATCCCATCTNCTGACCTGGAGAATA
AAAGCGTCCTGCCTCTGGGCCCCTTAGATCAGGTATCCAGAGATTTTTTA
CTCCTCCAGTGCTAGGCAGGGCCTACGCCCGTAAANTCAGCAGGAAGCAG
TTACAGAAGATGGACCTCCGCCCTTCTACAGCCCTCTTAAGATTAAGGAG
GAGTATCTAATCTCTGAGGGGAGAATGA
>rnd-5_family-6745#LINE/RTE-X ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
TATTGTAGGGCGTAAANGCGAAGATCTTGTTCACTAAATCGCACAGTNTC
CCCTTTATGAGGACCCACGGGAGAAATTTCTCTCAGNTCTCGGTGCCAGG
AAAAGCGATGTTTCTCCTGAGCAACCGGNTATGTTCTTANATCACGGACC
TGTAAATTTTGTATTGATCGTATTTTCCTCTTTGCTTTGGCTGCTAGGAA
GCTCAGAGCCAAATTTGTGACNAAATTATTAACGNGNCAGCGTCTTTTGG
TATACATTTC
>rnd-5_family-2985#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
TGTAGTGTGACGGGTCCCCCACCAGGTTACTTAAGGGCGTATGTCCGCTG
CCTGAACCCTGAAGGCCGGGCAGTGAGCCAAGGCCATGGTGCCCAGCCGA
GGAGCAGGTGTCCCTGAGAACCCAAACATCCCGGAGAGTATCTGAGAACC
TACCAAGGAAAACAGTCCCATCGCACACACACAGTAGGCAAAGAGCCAGA
AAATTAGCTTAAAAGCAGCTTAGGGACGGGAGGCGGCGCGGATCTCTAGA
GCTGTCCTGCCGCCGTCCAGGAGTGCCCTGTATGTAAGTCCTAATAAACT
CATCTACTCGCCAAGCTGGACTTGTCCGAGTCATTCTTTGGTCTCTCGGC
TCCCTCCCAGTTTGGGGGAGGGGTTTCNAATACAATTCCAGGTTTTTCTC
ATTACATTAC
>rnd-5_family-2473#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
TGTTACCCGGTGTAATGCCTACGTGACATAGCTGAATTTCTACCCTGCCC
TAACTCTGCTTATCTTTAGGAAACAGGATGCCTGCGATCAAAAGTTCCCT
TCGTAACCAGACCAGCTGAGACTGGTTAGANCCAAGATGCAGCCGACTTG
ACCTCCGAAGAACCTCAGGCTTCATTATAATCTNATTTCCATGCTAAATG
ACACTCCCACCAGCGCCATGACAGTTGACAATCACCATGACAATGACCGG
AAGAAGCCATAAAAGGACAAAAAGGAAGGCGGCACTCCGGTTCCGAGAAG
TTCACCCGCCCATTCCCAGAAAAGACATGAATATTCCTCCCCTTGCTTTT
AATGTCCAACCCCTTCATTAGAGANGCCCTATATCTGTAACCTCCCGNCT
CTCANTAGTTGAGAATCCCGTTGATTTGTAATGTCCAACCTTTCATTAGA
GANGCCCTATATTTTAGTCCCTCACGAGTTGAGAAGTTGATTTGTGAGCC
AGGCTCCCGCTTCTCAATTCCATGGCCATNGAATAAAGCCTGCACTGCTT
GACGCTCACTTTCGGTTTTGTGTATTGGCTTCGCGGCACCGAACAGGGAA
AGACCCCATTTTTGGGGGGACCGGCTTTGTCGGTAA
>rnd-5_family-6624#LTR/ERVL-MaLR ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
ATTACCCAGTTTCAGGTATTCTGTTATAAGCAACAGAAAACGGACTA
>rnd-5_family-4545#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
GATGTCTTCAAAAATGTCAATGTCATAAAAAGACAAAGAAAGCTATGGAA
ATGTTCCAGATTAAAGGAGGCTAAAGAGACATGACAACTAAATGCAATAC
CTGACCCTAGACTGGATCCTGTACTGGAGGGAAAAAATGCTATAAAGGAC
ATTATTGGGTCAATTGACAAAACTGGAATATGAACGGTAGATNAGATAAA
AGTGTTGCATCAATGTACANATACTGNATTNATAATTGCACTAATCCTAG
GTTT
>rnd-5_family-5156#LTR/ERVL ( Recon Family Size = 26, Final Multiple Alignment Size = 19 )
GCCTTTGCATAATCTCCCCACGTTTTGNTGANTNTCCACATTGTAANTTN
CGTCTCTCTCCGCATGTGAGNTAGATATTTCTCAGCCTCNCTTGCCGCTG
GGTNCAGACACGTANCTTAGGCTTTCCAATTAGATGCACCCATGAGACTT
TGNTTCGGAAGTNAGCGACATGAGGAAACAGGAGGGGCTGAGGACCAGAT
GGNAGCAGGAGNGGCANNGGGATGNCCGGGAGCAGCCAGGAGGCGGCAGT
GGCGGAGCTCTTCTCCTGNCCAGCAGAGACAAGCGTGGCTCTCAGGTGGT
TGGTGGCAGNAGCTTCCCTTGCATCAGGCCAGTTCTGCGGTNTGGTTCTG
GGAGTTGTTCCTGGAAGCTCANNCTTAGAAAGCTCGTTCCTCCAGCTCTC
CCGAAGATTCTGTGAGCTNTCCTAATATCCCTTAATAAATCCCTTGCTTA
AACTAGCTAGAGTGAATTCTGTTGTTTGCAACTAAGAACCCTGACCAATA
CAGTCCTGATGTCCANCATTTGGCCATGGTAG
>rnd-5_family-14290#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
TTTCCTCCCTTATCATCTAACATAAGATGTGTTAATAGGTGTTAACTTTA
TATCNCAGTATTTAAGTTACGGGATATCAATGAGAAAGGGAATGAACATC
ACCCAAGGACTTTGCATCCTCTTCTGGGAAAAGATTAGTGCGTTTTCAGT
TT
>rnd-5_family-10952#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
GTGAATTCTTATAATTTTATGTTGCCTCGGCATCTATTTTGAATACAAGT
TTAACTTTCTCANACCAGAAGCAGGGCTCAGTCACCCTTNACATAGTTTC
CAGTTCTACACCACACCCAGATGGCTCAAGCCGGTGGCCAGAGATAAGAA
CTTAGAGGCATCTCTCCCGCCTAGCAGACTGGGCTCCCCGCTTTCCCGCC
GCTTCCTTTAAANGGACCATTCAGGCATTTGCCCGTGAACTTAAAGTGAC
CCACACCCTATTCCCTTATATATACTGCTANCGGCGCCTCTCTTCTCCTC
TCTCTCTCTCTNCTCTTCATCTCTCTGCCTGACTCTTCATTCCTGCCTCN
CGTGACCCGGGANAGAGGACTGCCCTCCCGACTCATTGCGCCCTCCCTGC
CCAGGATCTGTAAGTAAAAAACCATTTTGAACTTGTTTCCTATTGTGGTG
GTGTATTGAATTTGCGCCTTCCATCTGAAGAACCAGGGGCTGCCCCAGGC
CGGGTTTTCCCCNGGGACGCCAGGGAGAACACAAGGTCGGGCTCCCAGCG
CCAGAGCGATGGTCAGGCAGGCATAAACTGGACACGGGTCAGACAAGAGC
CACAGGGCGTCTGCCAGTATAAACAAGTTTCCCGTGTGAGGGACCCCTGG
TCGCAGGTCGGACAACTAGGCATTAGGCCATCCGCCAGGTAAAAGAAGTA
TCCCGTGAAAGGCACACTGTAAACACCCATGTCCAGCTCCCCTTCATTTC
CCGTTAGGGCAGGGTTGCTAGCCGCTCTGGTACTGGAACCCCAGTTTAGC
TGGGGGCTCTCAAAAC
>rnd-5_family-3577#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
ACCCCAAAATACGACTATAGGGGACCAGAATATGCCACCCCAAAATATAC
TTCTTTGGCATATTTCGAGCTGGTTATTCTGAGAAACTGCGGACACAGGA
GTAGCTCTGAAAAGCGGTCCTTTTGTAAAGAGAAATTTATATCTATAAAG
GAAATCTACATTAGTAAAAGTATCTGTATCAGGAAGAGGGCTGCTCGAGA
CAACTTTTATTACCTGAGAGACTTTTTATCTTGCATAACAAGACAACCTT
TATTCACCATGCATTTCCTCCCCTCACCCTCCCATGACTTGTGTCNCCAC
CACCATCCCTCAGAAGCCCCAAGCCCCTATTCCTTTCTGTAGCTCAGGNT
GCTATANAAGCTTCAACCATCTGACCTTCTTCCTCGAGTNTCATATTTTG
TGGGACTCCCGTGCGTATGTACGTAATTAAATACGGTTTTTCTCCTGTTA
ATCTGTCTTATGTCAGTTTAATTTGTAGCCCAGCCAAAGAACCTAGAAGG
GTGGAGGGAAGCCATTTTTCATTCCCCTACA
>rnd-5_family-334#DNA/hAT-Tip100 ( Recon Family Size = 23, Final Multiple Alignment Size = 19 )
CTCAGATGTGCAGGTTGTGCACTGCACAACTGCCTCTCTAAGGGGTACAC
ATTCACAGCAGACATTGTAGATTTGTACGTTTATTATGACGATTTTCTGG
CAGATGGCAGTAAAGTGTCTTGAGGAAGGGGCGCCTTTTTCTAATTCGCA
CAAAGAGGCCCNNTAGTAGGCCGGCAGCCTGCTAAAATGTTGAAGGATCT
ACTTTGTCACATATGAA
>rnd-5_family-1506#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
ACACACATAAATGAAGATNCGATAGCTTGGAACCTTAGCTTGAGCCTGTG
GATAGCAATACAAGCTTGCGTCGGTTTCACTTTGTTTTCCCCAATAGATA
ATCCAATGAAGGCTGTGANCCAANACTTTGGGTAAAGCAGTCTCCATGGC
AGTGTCAGGCCTCCAAGTCCAAGCCTGGCCATTATAGCCTTGGTGACCCG
CACGTACACCTCCGGATGGTCTCCAGGAGCCAGAAAGTCTGAAGTAACCG
GATGGCCACAAAGAGAAGTGAAACAACTNGCTCCTGCCTCAACTGATTGC
TCTCCCCCTGCAACNTTCAACCATTGTTCCTGCTCAGCCTTGCGAAATTT
CCCCCTAGACATTAGGTTTCTCAAGACCCCCACCCCTGTAACTATGTAAT
TTACCTCACCCTCCCCTCTGCTTGCAACCGATAACCCCCACCCTTATGAT
CATGCCTGTTTGTAATAGATGACCCCTACCCTTGTGACCATGCATCCCGT
GACGCCCTCCCCTCCCT
>rnd-5_family-10277#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AGAACAAACATTCCTGACAGCATAGGTATCCACCCCCTGAAGTTCCCATT
AAATCTTTTAACCAAATTCATTTCCTCTCGCCTAGAGACCATCAAGCTTC
AGATGATCATGCAACAAGGGCTCCAGCCAGTTCCAGGTGAAGACACCACC
CCCTGGCCATCAAGAAGCTACCCTGCCTCCACTAGACAGAGCAGGGCGAG
AGTTCCGTGATCCCCAATAGGTAGGGACTACGCCCCAAGCCAGCATGAAG
CAGTTACAGAAAAAAGACCATCGGTCCCTCTGCCTCCCATAAAGATTTAT
GGGGATCACGTCTCTCAGNGGGGAGAT
>rnd-5_family-2379#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GGAGNAATGNCATCAAAGTCAGCAAGATGGCAGAATAGGAAGCCCTAGAC
CCTCCTTCCCCCTACGAACACACCGATTCAACAACAATTCACGGACNAAT
TTCCTTTGTGAGAAATCAGAAACCAGTTGAAAGGCTCCTGCACCCTGGGA
GAATGCGAAACCAGACNCANCGAAGCTGGTAGGGAAATTTGGGACACCCT
CTCACTAGAATCCCGACCCCGGCGCAGCGCCATATGATCAGGAAGAGACC
CTCCAGCTCCCAGCTTCTCCNCGGGGAAAGAATTGGTTCATGCATGTTCA
CTTTTCCGAGGGCGTCCAGAGGACTGGCTTGGTCTTGCCAGCCACCCGGA
GCTGAGAACAAAGGCGGNNGCTTGGACTGGCAGACGCCGTAGCTCCTCCC
TTCNGCTCAGCACAGAGNNAGCAGATGAAAAAATCCTAGCTCTCAGCTTT
NTCCTGGGGAGGGAAAGAGTTGATCCACGCGTCCAGCGCCCCAACTTCTC
TGGGGNTNCCCCAAAGAACTGGCNTCTGTCTTNCCAGTCCTGGAGCTCTG
ACGGATCCGGCACAGTCTAACCGCCCGGAGGCCGGGAGAACGGAGACGGT
GGTTTGGGCTGGTAGNCGCCATAGNCCCTCTCCATCCCCAGCTCAGCACA
GAACGAGNAGACAAAAAACCNCGGCCGTCTGCTTCTCCCTGGGGAGGGAA
AGAGTTGGNNCACGCGTCCAATGCCCCAGCTTTTCCGGGGGCTNCCCAAA
GAACTGGCTTCTGTCTCGCCTGTCTTAGAGCACTGACGGGACCTGGCNTA
CCCTGACCACGCGGAGGNAAGTGAGAAGANAGATGGCGGTTTGGGCTAGC
ATACAACTAGTCACCATAGACCCTCCTCCCTGGCTCAGCACACAGCGAGC
AGACCAAAAATCCNCAGCATNCCNGCTTCTCCCTGGGAGGAAAAGAGNTG
GGCAGAACGTCCAATGCTCCAACTTTTCTGGGGCTNCCNAAGGAACTAGC
TTCATNTCACTCGNCCTGGNGCACTGTGANGGAACCAGAATGNCCTGCAT
ACCTGAGAGCCACTCGGAANATAANGAAGCGGGTCGGACNAGNACAAAGA
GTTGGTAGAGGCTCCCAGAATCTCTGGCTGGGCTGATTGGTGAGGGTCTT
CTTCTGNNTGAGGCCAGTCTGTGAAGACTGGGAGAGGTGNCTGCTTTGCC
TAATGCGCAGACGCCAACACAGAGAGTC
>rnd-5_family-20238#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
GGGTACCAAATTTCTTTATTTGAAGGAATGGTACAAAGAACTTAAGTGGA
TGTTTTGGTACAACTTATAGAAAAGGTAAAGGAAACCCCAATATGCATGC
ACTGCCTTGGTGACCAGGGAAGTCACCCCGTGGCCATGGGGAAATTAGCC
TAAGGCTTAGCTTTCATTATCACTGTCTCCCAGGGTGTGCTTGTCAAAGA
GATATTCCGCCAAGCCAGATTGGGGTGCTCCCATCTTGCGCAAGTTGGTC
ACGTGGTCACCCAATTCTTTGATGGATTTCACCTGCTCATTCAGGTAATG
CGTCTCAATGAAGTCACACAAATGGGGGTCATTTTTGTCAGTGGCCAGTT
TGTGCAGTTCCAGTAGTGACTGATTCACATTTTTTTCCAAATGTAACGCA
CACTCCATCGCATTCAGCCCGCTCTCCCAGTCATCATGGTCTGGTTTCTT
GATATCCTGGAGGAAGATGCGGCCACCTCGTTGGTTCTGCAGCTTCATCA
GTTTCTCGGCATGTTCCCTCTCCTCATGAGATTGGTGAAGAAAGTACTTG
GCAAAGTTCTTCAAAGCCACATCATCGCGGTCAAAGTAGTAAGACATGGA
CAGGTAAACATAGGAGGCGTAGAGCTCCAGGTTGATCTGGCGGTTGATGG
CGGCCTCTGAGTCCTGGTGGTAGTTCTGGCGCACCTGCGAAGGTGACGCG
GTCGTCACGGCGGCGGCTAAGGAGAGGCGGNGGCGGCGGTGGCTGCGCGG
CGCTGGAGAGGTCGGGGGCCTCGGGGCGGTCCGAGGGCGCGGTGTGGAGG
TGACGGAGGGCTGGCTGTGGGCGGCCGGCCGGGGTGGGGGACGAGCGCCG
GGTTCCGTCCAAGCACTGTTGAAGCAGGAAACCGCGGCGACTCTCGGCGA
AGAACG
>rnd-5_family-2645#Satellite ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
ACTTGGGGTGATTCTGTCCCCTAAGGGACACTGATTGATATTTGGGGACA
TTTGTGATTGTCACAACTGGGGATAGCTTCTGCTATGGANTGGGTGGAGG
CCAGAGATGCTGCTCAGACCCTGCAGTGCCCAGAATGNCCCCACCNCAGA
GAACCACGCGACCCTGATGTCCACAGGGCCGGAGAGAGACCATGTGTTAT
TTGGGAAANAAATGGATTCTGCTTCCTGCTCACACCAGACACCAGAATAA
ACTCCCAATGGGGCAGACGGCATAAACCAGAGGGANCCCANCTCCTGGGA
TTCACCTCCTCTCTCCCCCCTGCTCAGCGGGTGGATGGGACTCTCCTCTG
GCCAAACTGAGCAAGCTCTCACCTGCTGCCACCCAGGAAAGGGGCGCCCA
AGTCTTTAACTCACAGGCGAGGATCCAGGCCCTCTGCCCANCAGGACAGT
GAACCCTCCCGGAGCTGGGGAGTGGCAGCCCCAAGTCCACAGCCAGNCTT
CACCCNGAGGAGCGGGACATCTGGGAGGGGAATGACAGGCACCCCAGGGC
CTGATGGTGGGGACAGGGCAGGGTCTNANCCCCATGGCAGGGTGACCTGT
ACTCCCCCAGGGCCACCCACCCCNGCNGGGACACTGTACGCCTTCCATTC
TCTGGTCCAAGCTCTGCTCTGGCAACGCCTGCATGCCCGAGGGTGGGGTG
TGCTCTGGGGGTGCAGTTCCCTGACTGCCTCAAGGCCACTCCTGGGGAGC
AGAGCCAGTGCCTCCTGCCTCGTCCCAGGCACAACGCCCAGGGACCACCT
CTGGTTTTGGATAGAGAGGCTCCAGGTGTGTGCACAGGGGGCCCCAGGGC
AGGGCTAACCACCCAGNTTCNCCTGNGGTTGGTGCTCTCAGTGTTGAAGC
AGGAAGGTATCAANCGAACTGCGGTGGCGGTAGTGGCAGAGCTCAAAGAG
GGGCTCGGGACTGACTGAAGACATTTGGGATGCAGTCGGTATGCGCCGCC
TGCACCCTGTCCCCACCTCACTCACCTGCCCCATCACCACANCTGTCCCC
ACCTGCACCTCCTGCACCCCCATCCCCGCCTGTACCCCGCCCCNTNCCNC
CACCNCCATCTCCACGGGCCTCCTCTGCCCCCTGGTGGCCGCCAGCCGTA
ACGAGATTTGGTGGGGACACATTTGAATCATNGCATTAATCTTCGAGTAT
AAAGACATCCACAGCAGGCTTTNTCCAGCCAGCTTCTTCGAGACTATTTA
CANGGTTTGGGGTCTACAGCACATACACTAAAATATTTATACTTCAAAAA
GCAATAAAATAAATGGTATTACTATTNTTCCAGTATTACAATGGCCGTGT
AGGCATTCGNAGTATGATTTAGTTNGTTTGGNACTGTTTCTATTCTATCA
CCACATGAACTGTTTCCTGCACAATTCTATACTCAGCTTGGTTCCAGCTG
AGCACAAAGCCATCCCTGTACTACCACTGANAGCTGGCANTAGCTCTCTG
ATGGTGTTATTATTCTGCTGTAGAAGGTGTCCTTAAACTAGAAAAAGTCC
ACGATCGAGTATCTAGTCATTCAACGCTATCAATTCCTAGGTGACTTTTT
GAAAAAATAGTATCTCTTGTTGCAAGAAATGCTGCATCTGTGATTTTAAG
TCTCTCACTCGAATTGGATGGAAGTGTTGAATTTCAAAGTGGCCAAAGAA
ATCCTGTTCCTGTGATCCTGATGTCGTCCTTTCTGCCACATGTTGCCTGC
TCACCGTGTCATTGGTAAGAGCTTCCCTGTGTACGTGATGATGTCCAGGA
TGTTGGTCTGGTGGCCCTGAGCAGCACTAACATGTCCATGAGTGGGTCCA
GGTCCTGCCTCGGCTGATCGGCAAAGAGCTCTCCGATGGTGTTGCAGGCA
TCTCCGGTGAAGTGGGAGCCCGTTCCAGCTCCAAGAGCTGGCTGAGGCTG
AAGAATAACTGGCCGCCTTCTGATCCTTCTTCTTAAAGCCTGTCACCATC
ATCTTAAAGCNTGTCACCAACTCATTGGCTATGAAGTTGAGCTGAGCGCC
CTGTTGTCCACCTTCTTGGTGAAGCACTCAAAGCCGTCAATCTTGCTCTC
CTACTCCTAAAGGACGAGAACCACTANCTGGNGGTGAGCTCAGGGTCAGA
AAGAAGCTGGAACTCACCATCTCATCCTTGTCAGCCTTCCTCTTTCCCTG
TCTCCAGGCTGTCTCTTCAGTGCTGATAAGACACATCATAAAGTGGCAGA
AGATGTGGCACTGTGCCCTCACGCAGAAACTGGCCGTGTGGTTCATCCAC
CAGATTGGGTCCTTTCTGCACTTGAACATAAAGTCCTCCTCAGGACGGCC
TGTGATCTGCCTCTTGGCACCCAAGAGGCCCTCAGTCCCATATGAGCCCT
GATGCATGGACTGGAACCGCAAAGGCAGCGCATACCCTGCTCCCGACCTT
GCTGCTCATTTCCTCAATGTGACTCCATTTGCGGCAGTTGTTGNACTAAG
GTCTGTGCATGCCGGGCAAGGCCAAGCTGGGTCAAAGAGCAACCAGTCAC
CTCTGCAAGCGTGTGCCAGGAACCGGTGGACCAACCACCAACCTCATTCG
CTGCCAGTCAGGGTAAATCAGCTTCCTACCCTAAAGGTAGAGCCCAGTAC
CATCTGCTTTTCCTCAGGTCTCCGCTCCATAAGCCGTCAGGCGGCAGCCA
CTCAGGCTGTGGGAACCTGACCATCCCTGCCTCCTTGAGTGGGTGAGGTT
GGTGGCTGGCCCACTTGCTCCTGGCATACCCTTGCAGAGGTGGATGATTG
CTCTTTGAGCCAGCTTCGCCTTGCCTGGCATGCACAGGCCCCGGGTACCG
ACACGCCGCTTCGAGTGAGCTTGTTCTCTCTTGGGGCAAAAAGTCTGGCC
AGGGCCGCAGAAGGCTGAATCCCATGTGTGGTAATCCCGGCTGCTGCTTG
GGGGGCTTGCATGGTTCCCCTCCTTTCCCCGGGCTCAGATGAAGCCCGAC
CGGGCCAGCACCCTTTAGGTACGGGACTTGTGCCCTAGGAGGGAACTTCT
GTCCTACAGGTTGGGTGGGAAGATGTATGGCNTGCTGCTGGCTGCCAGGG
TTGTCGGGATGCCACGTTCACCCTTCCNTTCAGGGACCTCNAAGTGACCA
GCTTCTTCTTTGAGAATGACTTCCCAAGGCCCAGGAGCCCCTGGGGCTGC
AGGGCAGCTGGCTGCATGCTNCCCTGGCTTCTTCCATGTTGCGCTGGTCA
CTACCCACCAAGGGTGGTCAGATGCAGGCACCATGCNGGGGGNTTGTCTC
TGGACCTTCGTCTTGGTTACCNTGGAGTTGGACTGAGCCTGGTGTCAGGG
CCCTGATGGNGTTGTCCNGGGTGGTCCTGGGGGTGATCCAGAGGAGATGC
AGAAGGAAATTGCTGCGAGGATGAATGACTGTCAGCACAGAACAGGCACC
CGGTGAGTGCTCAGGGATTACCCTCGGCAGCTGCCCAGAGGCCAGAACCA
CCCACCTGGTAGCGACTGTCCCCAAGCCAGGAGGAAGGGAAGAGAGCAGG
TCNCACTCACCTGAGTCTGATCAGTCAGCTGTGCTGAGACGTGCCTCTCA
TGAAGAAAACAGTCCTGCAGGCAGAGCCACCGACAGACACCGCTGTGCGT
CTCTAACTGCTTCACGACACAGACAATGGGGGGTGCTCAGCAAGGNTGAC
CATCNTGGGGTGACACAACCCATCACAACGGGAACCTGCTTGGGTCAGCA
GGGCCCAGAGTCAGCGTCCTCTACCCCTGAGCCGACGTGNCNNTGTGCTG
GTNGTGTGTTGTTTGCGCATGCGTGTGTNTGTCNCTCCTCTCTGGCCAGG
CCTAGCTNCTCCACNCACGGGTGCACCCAGGTCCTTGTCCTCACTGTCAC
CNCCGGGGCCCGGGGTCAGCATTCGAGCNTCCACGGGTGCTCCCAAATCT
CTGCCCTCCCCGCCCAGAATGGTCCAAGGGATGCAGACAGAGGAGGGGCA
CCAGGCAAGGCAGAGAGGGCTGTCGCCCTCTCTAGGTGAAACCCAGATTG
TTGTAAAGCCCTAGATCTGCCCGGCAGTGCTGGATTCANCACATCTTCCT
ATGTTCTCTTTCCAGCAACCCTCCAGGGTGCCCTGACTCACCTTCCCTAC
AGATGGAGGCAAGGAGGCTCCACAGACAAACCCCCTGCCTGAGGTCACAC
AGCGGCCAGCTGGCCAGGTTCCTACTGACCAGGTCCNCACTGATNAGGCC
CCTANTGACCAAGTGCCCACTGACCCCCGTTAANTAGGCTCCCACTTANG
AGGCCCCACAGACAAAACCTCACTGACCAANACCCCACTGACCAGNCCCC
ACCCCCGCTGACAAGACCACAATTTACCATGTTGCCACCCACCCCACCCC
TGAACAATTCTCCATGAATCCGTTCCCAGCTGACCAGGCCCCAAGCCACT
AAGGTTCCACACTGACCGGGCCCCAAGTATACTGTATACGCCCCACCAAA
CATTGTTTAACCCGCTCAAGCTTTTCATTGTTTATGTTCCACCCAATAAG
CTTCACTAATAGGGCCACCANTGACCAGGTCCCCTCTGACTNAGGCTNCC
GACCAGTCCAGGNCCCCACTGACGAGGCCNCCGCTGATGAGGCCCCGCAG
GTCCCCGCTGATCAGGTTCCAACTGGCCAGGTACTNCGAACCGGGTCATC
GCTAACCATGGTCCACTGACCAGGCCCCCGGGCAGCGGTGCTCAAAGTCT
CATTCTAATAGCCCCTCAGTCCACAGACCTTCCCTCCCTGCATGTATGCC
CAGAGGTCAGGCCCCGGGAGTTTTCTTGGGACGAGACCTCTCCTCCAAGA
CACAGGGAGGGATACTCAGCCTCAGGCTCCANGTGGCCAGCTTNACACTC
TGGGTCCATCTCAAAGGAGACACTGAGGTGGCCTGGCACTGCCTGGACAT
GCCATCTAGCCTATCCTGAGTGTCAGAGTGGGAGGAAAGGAGGAACATTT
AGCAGAGGAGACACCCTGTGCTGCTGGGTCTCCCAGGGCCCTTCCAGCAG
AGCCCCAGTCTGGAGACACAGCACAGAGGCTGCAGAGAGACTAATCCAGA
ACNTTTGAGGCTGAGCCAGAGACCANATGAAGACTGTTCCCAGACAGACA
GAAGGCCTTTTGCTANTTTCTTGGTACCTCAGTGGATGCGGCAGTGGTTC
TTTCTGTTGGAGGCCAGTGAACGTGTGCTGGGAGGGCTTGTCCTGCGNTT
CCTTGGTGGCTCCAACCTCTGCTTCTAAGAAAAATTACTCACTCCAGGGC
TGGGGGAGAGAAAATACAAGATTAGCGTGTAACATCATGTGNCAGAAAGT
AAAAAAGTACTCACAGAGTAAAAGGGCCAAATTAAAAAGACATAAAGTCA
GCCTGAAATGTCTACCACTGGCCTAATCTTGGGGCATCTGAGCACCAAAA
TCACGAGNTTTCCCTTCTCCCTTACTTACTGGTTTT
>rnd-5_family-248#DNA/hAT-Charlie ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
GTCTCCCAAACTTTTTTGATCATGACATCTCATCAGTAAAAGAAAATCAA
CTNCGTCATAACATTCGTTTGCTTATTTATTTATGTATAAATTAGATACC
TATTCAGATGTNCTAAGTATCACGGANATCTTGCACGAAAAANAGAAAAT
TTTAAGGGGGAAAGTACATANGGNTGAAACATTATAACAACAATTTTGTA
TATTTATTNTGTNTANTACTGATATGGAATCTTTTTTACTCTCAACNNTT
AGGATAATNAGAGCNATGTGAATGTGNTCTCAGTGAATGCTTTGAATTTN
CTTTNAAATCACANTCTTTTTTCAAGNTTAACACTTTNTGATANAATNGT
CTGAAGGTCNAGTCTCTNAGGTNATGTTTAGTTCTAGTGCGTGGTTTTNN
TGGCAAATTTTAGGCCGAAAGGCAGTCTTGCAAAAGGTACACAGATCAAG
CGGAAGGTACACTNTTGGCTNCGCTTATTATGTTANATTCATTTTCAATC
CCATCCNCCAGTTATACAAAAGTGTTTTCTNATTAATATTCGNCTAGTAA
ATTTTCATCTTCCCTGACGTCAATCGTTNTNCTTGCAAACTAATCGGAAG
ACGTGATGCATTTATATATTTTAACAAATGCGTTCAAAATCNTTCAAAAT
CTTCTAATGTTACTGAAGATTTTTAAACGGGTTAGAAAATTCTGTTTCCA
AGTTTTTAAAGAGCGCAGATATGACGTTTTTATAGGTGACGCTTACGCAT
TTTCAGCAACAAAATCACGTAACGATGGAAACATTTCCAACATCCNTTTT
CAAATGCTCTCCCTTCCACACAAGTNTCTTTTGNAAAAAGCAGTTNCTTT
CTCACTCATTGTTAAAAAATGTCGCCTTTACCTTGAAGGGACAGATTAAG
TATGTTTTGTTTTTTNAAAAATATCTGCTAGCATACAGCTACTTGTCATC
ATAGGAAAGGTCAGCAAATTTGGAANACTCGTCTTTTTGTAAAGAAAATT
ACATGACTCATCTTTAAG
>rnd-5_family-16239#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
TTTTTTGAAGGAAAATTTGTATTGTTTTAATTATTTTTATGTACAGAAAA
CTCAACAGTGTACATTTAACCCAGTTTNGTGGCAAGTTCTTTAGCCTTTG
CCTTTTCGAGCTTGGCGATGCGAGCCACAGACTTGGGACCCAGGACATTG
CCTCCCCAGTGACGGCGGATCTCATCGTATCTGTCGTTGTAATTGGTCCT
GATAGCTTCCACCAGCTTAGCCAAAGCGCCTTTGTCTTCCGAGTTAACCT
GTGTGAAGGCGACAGTGGTGCAGGTCTTCCTGTGGACTAGACGTCCCAGT
CTTGCCTTCCCCTTGATAATGCAGTAAGGGACTCCCATTTTATGACACAG
GGCAGGCAAGAAGACAACCAGCTCGATGGGATCCACGTCGTGTGCAGTCA
CCACCAGCTGAGCTTTCTTGTTCTCCACCAAGGTGGTGACGGTGTTAACT
CCTGCTCGAAGGACAGGTGGTCTCTTAGTGGGGACGTCCCCTTTGCCAGC
AGCTTTCTTCTCGGCCCGGGCCAACAGCCTCTGCTTCTTCTCTTGCTTTG
TCTCTGGTCTGTACTTGTGGGCCAGCTTAAGCAGCTGAGTAGCTGTTTGG
CGGTCCAGGGCCTGGGTGAACTGGTTAATTGCAGGAGGCACTTTCAGCCG
CTTATAGAGGATGGCTCTCTGCCGCTGCAACCTGATATAGCGGGGCCATT
TNACAAAGCGGGTGAGGTCTCTTTTGGGCTGGATGTCCTGTCCAATGCCA
AAATTCTTAGGCCTTTTCTCAAACAGGGGATTCACCACTTTCTTGGCCTC
CTGCTTCTTCACGACAGCAGGGGCCGGAGCCACCTTCTTCCCCTTGGCCT
TCTTTCCCTTTCGGCATCTTGGGCAGCAGGAAGAG
>rnd-5_family-5798#Unknown ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
GGGAAGGTTGCGTGCTCCCCTCCCAATTTCCCAGAGGAGGAAAAAAAANT
TGTAATTGTCGGAAACGTGATAGAACTGTCAAAAGTACATGAAATCAGCT
ACATANATTGTGAAACGTAAGTCACGGTTCTGTTTGTTCTGTGACGGTGT
AAAAACTCGCAAATTTTTCCATCAAGATAGAAAATAAAAA
>rnd-5_family-9512#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AATAACAAGGACTAAAAGGGGAAACATCACNACAAATNCTACAGACATTA
GATACAANAACCATGTGANATGTAAACAACGTTATGNCAATAAGTTCACA
TTTCCTGAAAANTCAACTTACCAAAACTGACACAAGAAGAAATAGAAAAT
CTAAANANTNCTATATCTATTAAANAAATTGGATCTTTAATTAAAAAACC
TTTCCAACAAAGAAAATCATACAGTTTCAGATGGCTTCACCAATGAAACT
CTTCCAAACATTTAAGGAAGAAATAACNCCAATCTTACAANAACATAGCT
GAAGAAAATCTATTCCCAANTCATTTTATGAGGTCAGCATAACCTTGATA
CCAAAACCTGACAAACGTGTTACAAGAAANGAAAATTACAGGTCAAANTC
TTTCATGAACTTAGATAAAAAATTCTAAACAAANTATTTNACAAGTNAAA
NCCAGCAATTT
>rnd-5_family-770#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
GCAGGGCATCTTATGTCCTCCCACCCAACAGAAGAAGGCNACCCAGGCCT
GGTGTTTCTCGACCCCCAACCTAGCAACAGAAGGCAGCCCAGGTAGGCTC
ATTCCTCCCCCGGATCGAACGGGAGTCCCNCCGACAACACCAGGCGAGCC
CGAGGCACCACAAGGAATCAATCGGAGCCCCGCTGACAATAAGGGAGGCC
AGGGGAAGCGCTCTCCTTCCCCACCGGGCCTGAGACTCCTCTCCCCCACC
NAGAGACACCAGGCGANCGTGGCAGATCAGCAAGGGGGATCCCGCCACAA
CGAGTCGCCCGATCGGCCAGGAAGCCTCTTCGTCCCCGCGGGCNTGAGAT
TCTCCTCCCCCACCGAGAGACATCTGGTGGCCCAGTGCAGAAAACTCNTC
TGCCCCCTCAGGCAGCACCAGCAGGGACCAGTGGGAGCCCCAATGGCTAC
CAGCATCCGATAGACCAA
>rnd-5_family-2544#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
CAACATAGAACAAACACCAAAAANATCAACATGCCTGGGCACATCATATT
CAATCTTCATAAACTAAACGAAGAGAAAAACTTGAAAGAAGGNAAACAGA
AGTAAAAACACCATACCTATAGAGGAGCAAAGATAAGAATTACATTGAAC
TTCTCGTCAGAAACCATGCAAGCAAGAAGAGAATGGAATGAAATATTGGC
TGTTGAAAGAAAGAAGCGAAACAAACAAACAAACAAAAAACCTGGCCGTT
TGAAATCC
>rnd-5_family-6105#snRNA ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AACTATACTTTCAGGGATCATTTCTATAGTTTGTTACTAGAGAAGTTTCT
CTGAACGTG
>rnd-5_family-7568#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
ATCAGTATGTCCCACGTCNCTTTCGTTNTTAGAGAAAGATACTGTCTATG
GCAGATACGGCGGATTGATCCATACCCACTTCAGTCCCCTGGCGTCCACT
ACGCAAAGGAGCTAGAAAGCTAAAACTCACATTTCCTCAACTCCCTTGCA
GCTAGAGTTCTGGATGTGATTTAGGTTCCACCAATCAGATGCACCCATGA
AAGACTGCGATTTGGAACTGAGTCTAAGTGGNCGAAAGGAGGCAGGGNAC
AAGCACCGTTTTGCTCCGGCAGAGGGGTNNGTGTCAGGGCACCATGGTTC
TGGAGTCGGCAGCTTCNTAATTCTCCAGCTTTCGAAGGTTAGCAGCGGTG
GCTCTGGGGATCCAGGCAGGGTCGGCAGCGTGGGTCTGTAGTTAGTCAAN
GTGGCAGTAGCTCCTTGCTTCTTGGCTGNNCAGCTGTCATATGTGGAGCT
TTCCTTTCCTGGGGACAACAAGGCAGAGTGGTCCTGGGAGCTCAGACTAC
AGTTGTCTCTTAGCCCTTCCGANAAATTTGTANGCACCTAATCCTGTATA
GTAAATCCCTTTCTGTTTAAACTAGCCAGAGTGGATTCTGTTGTCTGCAA
CAGA
>rnd-5_family-2483#DNA/hAT-Charlie ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
CAATTTGTTNCTAATAATAAAGTGCTAGGTTTGTAAATGANTTTTNCTTT
TNNAAAAACTAAATTAGAGCGGATTCAAGGTTATCCCTATAATAAGTCAC
TCTCACTCACTTGCATTCACGGTATGCTTTCTTAGTGGGAGAGAGGGGTG
GAGTTACAGCCAGAAGCCA
>rnd-5_family-5344#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 18 )
TTAGATAGCTGAAGGGAGAATTAGTGAACCAGAAGANATATCTGAAAAAG
AAGAATCCAGAATGCAGCACAGAAAAGAGAGACAAAGAAATGGAAAATAT
GAAAGAGAGGTTAGAGATATGGAGGATAGAATGAGAAGGTCTAATACACG
TCTAATCGGAGTCTCGGAAAGAGAGAATNGAGAGAATGGAGGAGAGACAA
TATTTGAAGANATAATGGCTGAGAATTTTCCAGAATTGATGAAAAGATAA
CACCAATCATCCCAGATTTANGNAGCGCCGAAGAATCCCNAGCAGGATAA
ATAAAAGNAAATTCACNCCTGGANACGTCATAGTGAAACTGCGGAANACC
AAAGACAAATTAATAAAGACAGCCGAGAGAAAGAAAAACCAACNATGACA
AAATAACAATCAGACCGTCAGAAGACTTCTTAAGAG
>rnd-5_family-381#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
TGTTATCTCCTGTGCCCTCCTGGGAGGTGATATTGTTTATTGTCTGATGC
ACACCAGTCCTCTTATGCGAGACAATATCACCAGCTTCCATGTGGCTTCC
CCTCAGAGCATGGCTTTTGCCACCCTCACCTAGAGATAGGACTTGTCTAA
GGTTGCCTCAAGGGCAGTTTCCAAGAGAGTGTTTGTCCCAACATGTGCTG
GGGGATTGGGAAGACGCAGACCCCTCAGAGCCAAAACTCATTGCTTGCTC
TGAAGGGACCAGTGACTCACTCTATCCACATGGGGTCTCTGGTCTCCTTC
AANGGCCCAACATTGAGGGGAATATTGGCCTTCCTGTCATGGTAGGGGCT
TTGATGCTAGCTCCCTTCCTGGGAGAGGGAGGAGGTGGTGGAACCAGCCT
GCNCCTCACACTGGCACCCGCACTCCATCTCCAGCCCCCAGAATTATGCT
CCTGGCTTGTATGGGTCCCAGTATCAGCCAGACCTGCCAGTATCTGCCCA
GTATCAGAACTCAGCCCTGCCCCTCAAGGTCTGACCTGGTCCAGCTACCA
CCTAGAGCCCCAGTGAGTTTGAGGTGAGTGTGAGGCAACTGGCACAGCTT
CTCTTTTCTTCTCTGTCTGCCACAGAAAATGGGACCCTGAGCCCTTGTGG
CCACTGCCATTCAAATCCACCCTCAGAAGCAGGACTGAGGCTTCAGCCTC
CCCTGGCACCTCTCTGCCAAG
>rnd-5_family-195#DNA/hAT-Charlie ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
ACACTTACATAGCACTAAGATAGTANNTACATAATACTAAGAATTAAGNC
TTTTCACTGTGTCGACATTTACGCCGATGGTGCAAAAGCAATGGTGGGTA
AAGCTGCTGGTGCCTTAGCACGAATCAAGGCAGTGGCACCAAATTGTACT
AGTAGTCATTGTGTTCTTCAATTGCCATGTACTCACGNAAAAACAGNCGT
TCCACTTAAGAATGTCCTTGATGAAGCAGTAAAAATATTAATTTTATTAA
ATCTCGACCA
>rnd-5_family-2211#LTR/ERVL-MaLR ( Recon Family Size = 27, Final Multiple Alignment Size = 18 )
CGAGCGATCCTTTGATAAGGAGATTAGCGTGGGCGTGAACCGTGAACTTA
ATCAGCCACCCCAGCAGGAAAACTGCCAGTTTGAACTGAAGGGGACGGAG
ACGGGAAGGAATGAAGGAAGGCTGTCGGACTTCTTGGATTTTACAGGACG
AGANCATAGAGCTATTCGGCTGAGAACGTGCGCTATTCTTCAAGACAAGG
GAAGAATGANCCCGAAGGCGATTCAGAGATCATCAGGGCTGCCTCCTCGG
TTTTCCAAGAGTGGGGAGCCATCGCCTCGCTTTCAACAGGCCAGACGGCC
TCCGCCCAC
>rnd-5_family-3754#DNA/hAT-Blackjack ( Recon Family Size = 22, Final Multiple Alignment Size = 18 )
CCTGTTGACTCCANGCCATCCTAGTTCAGCATTTGTCCCGATTTTTCAGA
AGTAATATTCATTAATANTTGCATTAAAATAAGCCAGTGTANTTTGTAGA
CCTTCGCTTTGTNNTCTTTCTAGCTTCTGCCATNATCTTACTTACTGGCA
AAGTGTCTGTTAAGACGCAAGTGCAGTGAACAGAGTCTATTTAAATCTAA
AAGANTGGTAACTTCTCTTTCCAACCCTTTCCGGACGCAANATAACTAAC
ACCTCCCTTTCAAGGACAGCATGCAGGGCGCTCGCTGACAAAANAAAGTC
GCTCGGCACANGAGCAGCTGGGAANNNAACCGTCCTTCTAGTCTNNGCGT
GGTGAGAGAAGAGTATTCANCAATGCTNCCTCTGCCGGCGACTCGGTGTA
CCAGCGCATATTGTGCCGTGGCCTGTAAGATGCACGAGGCNCCAGGCCGC
CAGTNAACGGAGTNANGGAGAAATGTGGGAAATTAACGGCTGTTAGTACG
TNAAATATGTGCGGGAAATAGAGGCTGAGCGGTCCTGNCACAGAATAAGA
GAGTAGTCGAAAGGCTCTTGCTACAGTGGTTTTGTCATTTATTGCGTGAT
GTAAATCTACAACTATATGTTGCTTNTATTGTTTGGCAATGCGTTTTTAT
TTTGNAATAAACCTTCAGTTTGACAATAANCGTTTAGAAANANAAATGAT
GAATATTTAACGAAAAACTAGGTACTAAATTTCCACTTAGTACTTAAAAT
GCACAAAATATTTGTCGACATTTATCCGCCGACCATCATGGGGGCCGTAG
TGATATCACCGACCACGNGAAAACCAGAAGACACAACANTCTGCTGAAAA
GCATCAGCGTCTACTTCAAAAACNTGTAGTTATTTTAAAATTATGCTCNA
AGACAACTTTAACGTACAGCTGCAGAAGGTGCATTTACATATCACTCNGT
GAAGCATGACTTTTCATTTAGATCAAGTGACTTCTTCNAAATTAATTTCG
CTCATTTTNATTCCAAGTTTTNTTATGCACATACGAAAAGTGAAGCAATT
GCTGTTAATGTGTTGGCTCCATTAGTAGAAGAAAGNNCCAANACTGCTGG
TTTCAGATTAAAAATCAGTTANTTCNAATAGANAGACNCTTAGATTCATT
CAATGTAATCCGTNTNTTTCAGTTTGGTAAGGGCTATAAATGGGANCAAA
GTAAAGCTTCTNGAAGTTTATTCTGTCAAAATATTATGAATGCTACTGTA
AATTTAAAGTTCAACATTGAAGANAAAACTGTTTCTGNTGAAANGGTGTT
GTCATGATAAAAATCCGTGTTCTCACTAAGTTAAGAAGCCTATGGAGCAG
AAATGCACTTGGAAATTGATCATGCGTACAAACAAGCTGCTATTCAGTCN
TTTGAAATAAACACCGAGTTGTCGAANTAACTTATATTAGTATATACAAT
TTGACCAAACTGTAAAATCCTTGTGATGAAACTAATGTTGAAAAACCATT
CTCTAGCATAACAATACACACTGTCTTTAATGCATATTAGCAACAGAATT
TTAGATACATGAGTTTATGAAGAACTTTGTAAATTAAGTATCTTATATTG
GCTTAATTCTTTTTTATTTGTAATTGAGTCTTCTGTAGGTTGGTTAAGTT
TTGGTTCACATATTGTTTGGATTATTTAAAATGCCACTAGTAAATGCCAA
AAAACTT
>rnd-5_family-5516#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
TTAAAGTATGCCCCCGGCTAACAGACAAAATGGACTCCCCGTGGCTAACT
GAGGTGCTCAAAGTTAAAACAGAACCAGGCGGCCATGGCTAGGTGAGGGA
GCGGTCACGTACTCCGTGTTCTCAGAAAGATGTTGTAAAAGTGTCACAGG
ACCTCCCTTTCTACAATCAAGCCAAACCAGTTCCTGTTTGTCNGTGGAGC
CAAGATAAACTGGCCGGAAACACTCTCCCCCCACCGGCCNTTTGAAAGAA
ACATCCGACAGAGACTTCTGGTTCGGGGCTTGGAAACCAACCAATCAGGA
CTCANCTGCTTTAACCAATCAGGGCTCAGCTGTATCGACCAATCAGGACT
CAGCTGTNTCGACCAATCAGAACTAAACGAGTTTGAATNCTTCATTTGCA
TAAACGGACCTGATTGGGAACCNGGGCGGGAACTTTCCCTATTNAAGCCA
GACTCTCCCTTTGTTCTCCGGAANGCACCTTCGCTTTTACACCGAAGGCT
GCGTCTCCCCGGTCTGCAAACTGTTCACTGAAATAAAGTCTCTTTCCTCC
AAATTCCTTTT
>rnd-5_family-4796#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 18 )
CATACCACATACCAAAATAAATTCCAGATGTGTCAAATATTTAAATGTNA
AAGACAAAACNATAGAACNGAATGAAAGAAAATCAGAGAATATTTTTATA
ANTTTGAAGTGAGGAAAGACCTTTCTAAACAAGACATAAAACTCAGAAGC
CATAAAGGAAAAGNTTGATANATTCGACTACATAAAAATTAAAACTTCTA
CGTGGCGCAAAAGATACCATAAACAAAGTTAAAAGATAAAACCAANAGNA
GACTGGAAGAAAATATTTGCAAC
>rnd-5_family-1200#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
AAAAGATGCAGTATGGAGTTTGTGGCAAACCCCAGTAGGAGAATCACAGA
TCAGACCCCTAGGGTTCTGGAGCAAGGCCATGCCGTCTGCAGCAGAGAAT
CATACGCCTTNTGAAAAACAGCTTCTGGTATGCTGCTGGGCCCTGG
>rnd-5_family-183#SINE/MIR ( Recon Family Size = 22, Final Multiple Alignment Size = 17 )
GTCGGNGGAAGCAGCTCGGGAATGTGAAATCCTCAGATTCTGTCTTTGTC
CTTCTGCTGCTGTGTGACTTTGGGCAAAGCNCTTATCCTCCCTGGACCTC
AGTTTCTTCATCTGTGAAATGGGGATAACAAANCCTNCCTTTTGANCCTC
ATAGGGTTGTTNTAAGAATCAGTGAGATAATGTTT
>rnd-5_family-10179#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
TTTTTTTTCCTGCCTCAGGTTTATTTGTACAAATAGCACAGGAGGACNCC
AGCCCCATGCAGACGGCAGCCCGGGGGGGTCGCACCAGTCCTTCTGTCCT
CACGTTGGCAGACAGAGATCTCTACTCTGAAGCCTTTGTAGGGGCCTGGG
CACCTTTGGGAGCCTGAGCTGGAACTGAAGCTGGAGCTGCAGCCTGGGCC
TTGGTTTGATCCTTGGCCTTGGCCTTTGGCCGGCAGAGCCTGAGCCCCTT
GGCAATGCGGGCACGAGCACGCTTCCCAAGCTTGGGGTGGGCAATGTAGG
CAAGTCGATCGAGCTTGCGGCTGACACCCTTTGGGATCTTGGGCTTAACC
TCCTTGGGCTTTACGAGGGCCTTGATAGCCTCGGCACGTGCACTCATGGC
CTTGGCGTTGTTGGCCTGCATCTTCTTTAGGCCCTTCTTGTTGTGCTTCT
TGGCAAAGCGCATGTTCCTCAGGAACTTGGGGTCCACCCCCTTAAGAGAT
TCGTATCTTTGTGATCGGGGTTTCTTGATACCATTTCTGTGCCATTTTCG
GGACTGGTTGTGTGTGGTGTGGTTCTTGGACTTGGCCATGTCTGCACCTA
AGCCGCGGCT
>rnd-5_family-6847#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
GAGCCGCCTAACTTTGGCAGGTGTACAGTCTGAGGAGGCAGCATGTGCAC
CACGGGGAGAGGAAGAAGATGNGTTAGAAAGNGTCCCAGCCCGGCTCGAG
GTGGAAGTGGTGGGTAAGGAAACCCCTGCAGCTGAGTGTGCTGTGGTGCC
CTGGGCTGGCTGTGTTGTAGCAGAAGATGAGGCCTGGGCTGCAGCTGAAG
CAGCTGGACGGGAATATGGATGAGNCCGCTTCAAGGCGCGGGTTCCCTGC
TGCTGTCCATGAAGGACCACAGGTTTGGGCTGGGTGATGGCTGCAGCGGT
CACGGGAAGTTTAAGTAGTGAGGTGGGACCACTGACCCTCAGTCTGGCCA
GGGCGGCGATGAGAGAGNCAGAAGATGGGTTAGAAAGGGTCCCAGCTGGG
CCTGCAGNNCAGGTCGACTTTCTTTTGGTGGGGGGGCTCAAGGCTGAAGC
AGCTGGATCTGAAGACGGACGAGCCCGCTTCAAGCCGCGGGTTCCCTGCT
GCTGTCCATGAAGGACCACAGGCTCGGGCTGGGTGGTGGCTGCAGCGNTC
ACGGGAAGTTTCGGTANTGAGGTGGGACCNCTGACCCTCNGTCTGGCCAG
GNCGGTGGTGGGAGAGGNAGAAGGTGGGTCAGGAAGGNTCCNAGCCAGGC
CTGCAGCCCAGGTCNACTTTCTTTTGGTGCAGGGGCTTGAGGTGGAAGTG
GTGGGTAAGGAAGCCCCTGCGGCTGAGTGTGCTGTGGTGCCCTGGGCTGG
CTGTGTTGGAGCAGANGATGAGGCCTGGGCTGTAGCTGAAGCAGCTGAAT
GGAAATATGAATGAAACTGCTTCAAGATGTGAGTTCCCTGCTGCTTTCCA
TGAAGGAACACAGGTTTGGGCTGGATGATGGCTGCAGCGATAGCGGCAAG
TTTCTGTAGTAAGGTGAAACCACTGACCCTCTGTCTGGCCAGGGTGGTGG
TGTGAGAGGCAGAAGATGGGTTAGAAAGGGTCCCAGCCAGGCTCCAGGTG
GAAGTGGTGGGTAAGGAAACCCCTGCGGCTGTGGTGTGCTGTGGTGCCCT
GGGCTGGCTGTGTTGGAGCAGAAGATGAGGCCTGGGCTGCAGCTGAAGCG
GCTGGATGGGAAGACGGACGAGGCCGCTTCAAGCCGCGGGTTCCCTGCTG
CTCTCCATGAAGGACCACAGGTTTGGGCTGGGTGGTGGCTGCAGCGGTCA
CGGGAAGTTTCGGTAGTGAGGTGGGACCACTGACCCTCTGTCTGGCCAGG
GTGGTGGTGGGAGAGGCAGAAGATGGGTCAGGAAGGCTCCCAGCCAGGTC
TGCAGCCCAGGTCGACTTTCTTTTGGTGCGGGGGCTCGAGGTGGAAGTGG
TGGGTAAGGAAGCCCCTGCGGCTGAGTGTGCTGTGGTGCCCTGGGCTGGC
TGTGTTGGAGCAGACGATGAGGCCTGGGCTGAGTCCCAGGAGGGTGCAGA
GGTGGCAGGAAGGGTGTCTGAGGAGGAGAACAGGGGGCCTGCTGACCTGC
GCTTCCTCCCAGACACAGGAGGTCTAGAGGGGGACCCTGCAGCAGATGCT
TGGAGGGCCACGGGGTCCAGGCCGTCTTGGGACTTGCGTCTCTTCTGCTG
TGCATCCGTGCTGGGTGCTTTAGGGACAGCGGGCAGAGAAGATGTCCCTG
TTGCTGGTGAGGACAAAGCATGGGAAAGCAGTGAGGCTCTGCACTCCCAG
AGGGACTTTTCCTCACCCTGCAGTGCACTATTNAGGCACATGATTTCGGC
GTTTTTCTCCAGGTCNAGGTCTTCAGCGGTGACCCGGAACCCCAGCTGTA
AGGGAGGTGGCAGCATCAGAGGCTCCCCTCGCCTGCGTGGCAGCAGAGGG
AACTTTCGTNTACGAGGCCTAGAGGCCTGAGATGTCGGGGAGCCACTCCT
GGGGGCCGGTTTCTCCCCAGGTGCTGAATCTGCTGCCTTTTCACACTGGG
CCTGACCCTGAGAGACAGNCTGAGGGCTGACCTCACTCACTGTCTTTGAA
GAAGTGAGAGGCAGCCGGCAGTGGGATGAGGCTGGCCCCTTCCTCCTCTT
TAGCCACGGGAAGCCTCCCGTGGAGCTGTAGGAGCTGGAGATGGAATTGC
GTTTGACCCAGCAGCTCATCCCGGAGGGCTGGGATGTCTTGTCAGATGGG
ATTTCTGACCTCTGGGTATGGAGGTCTCTCTGCAGGGGCCCGGGCCTGGG
TATGAAGGGAGAGAGGCCTCCACTGTCCCGCAGGGGTCTAAATGCAGACC
GTGCATCCCTGGTGCCCTCAGGGCCCCCTTTCTGATCATCGGGCTTCTCT
TGGACTCTGGGGTCCTTGTCCTGCTCGGGCATCCCTGCCCCACTCTCCAT
GAGGGCCCTCGACATGATCTCTGGATGGGAGTGTGGGGTAGAGCTGGGTG
TTCTGGGCCCCAAAAAGGCGATTACCTCCTCCAGGGCCTCTCTGAGAGTC
CTTAGGATCTGTGCAATCGCTGTGCTGCTGGACATTCTGGTATAGCGAGC
ACACAGCTCTGGCTTGCTGTGGTACCTGTGCCTCAAATTGAAGGCAGGAT
CGCCGGACGGAACACAGGGCTTGTAGGATACAGAAATCCTTGGAGTTGTT
TTGACACCAGGCTGATTCCAAGTGTCTGGGTACTTGTAGGANGGCTTGCC
ACTCCGTCCAGGGGCAGGAGCAACGGAGAGATCCCACAAGCAAAGTGAAG
TGAGGGATGCGGGCAGCAGGCTCAAGGCAACTGAGTCCTACTGGCGGGTC
CTCGGCCCCGGGANGGGACCGGGACAGGGATAAAGGGCACAGAGTGCCCA
GGTAACCGCTCCTGGGAGCAGTGGGGTATTTTCGGATNCTTGAACTCTCG
AGAGCTGGGCTCTGAGCGTCCTCTTGTCTGCTGCCAACTGGCCAAAGGCG
AAGGGAGCATTCTCCTGTTGCCGGGAAACGCATCATTCAAACCTGAGCGA
GTGGGGCGCGTGCAAAGACGGGCGCGAGTACCAGATCCGCGNCGGAAGGG
CGACCTTAAGGGATTCCCGCGACAAGGTATGCGCGCCAGGCACCCGCTGA
CAATGCGGAGTCGGTGGCGGGGTGGGGGGGTCAAAATATGCGCGCGAGGC
ACCTGCGAGCAATGGCGGCGGGGGAGGGCGCGGGGTAGAAGGGGCGCCTG
ATAGGTACCGGAAGGAGAGGCGCGCGCACAAAGGACGCCAGACGTTAACG
GTTTGGCCGGCAAGGTTCGCGCACAAGGCACCTGATGGCAATGGAAGGGG
CGGCGCGCGCGCGAGGTGTACTGTAGGGAGAGGCGCGCGCACTAAGGACC
TGGGACCTTAACGGATTGGCGCGGCAAGGTACGGGCACAAGGCANCTGCT
GGCAACTGCGGGATTGGGGGCGGGGTAGGGAGCGGCGCGCGCACTAGGTA
CTGGAGGGAGAGGCGAGCACAAAGGGCTCGGAATCTTAACGGATTGGCGT
GGCAAGGCACGCGCACAAGGCCATGATTATCAGTCCACGATTATTAATAT
CTCTAAGNTTTTGCTCATGCTATCCTCTCCCTTCCTGGAAAACCCTCCCC
AC
>rnd-5_family-696#DNA/hAT-Blackjack ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
GCATTATTCAGTGCTGCTGCCCAGCTACCTGATGTTTCAGTCTGTTGCGC
TGTGNCCTGTGCCTTGGCAGNCANCGCACANGGTGGCAGGNTCNGCAGGA
CGCCGTGNAACAGTTATAAGGNACACGGAAAGGNGCTNAGCAGTCCTGCT
CGGGAGAGTGTGNAGATCGTCTGNNCACCCTTGCTACAGTGATTCTGNTN
TTTNTTGCATAGTGNAAGTCCACAACTATTTATTTTTGACCCTGCTTTCT
TAGTTAAAAAATTTTTTTGACAGCAATAGTTATAATTTCAAAGAAGCACA
GGTCAAATGAAAAATTTAGTACTCGATTTCTGCTTCTCAAGAAAGTCGAC
GATGNATGTGTAATTTCACAAGTGTTTTAGACATTTACATTCATCAGGCC
ATAGCGTTACATTGACCTGTGAAAANCAGAAGGCTACACCTGCAGAAGCA
TCAGCATTTAATTCAAAAAATAAGCAGTTATTTTAAGATGTCAAAGACAG
TAGCCGCGGAAGATGTGCATTTGCACANCATTCTGTGAAGCGTAACTTTT
CATTTAGATCAAATGACCGTTCTTCTAAATTAATTTCGCTCATTTTTCAA
TTCCAAGCTTCTTGTGCATGTACAAAAGTGGAATGATACTGTTAANATGT
TGGCTCCATTAGCAGAAGAACTTNGCAGATAGTTAAATGATGTCAGTTTT
TATNAGCGTCATTAGATNCTTCAGATAGAAAATNAGTTAATTCCAATAAT
GATTTAATTATCTTTAAAATCCAATTCATGGAATCAAAGTAAAGCTTTTA
GAAAGTCAAAGTAAAAGACGTTGTGAATGTTNTCGCGAAATTCNGTTTAA
AAGTTCAACACTGAAGATAAATTGTATTTGTTTTNGCGATGATATNATGA
ATATACTGTGGTAAAAACAATGTTCTCGCTAAACCAAGGGGTCCANAGGA
CAGAAATGTANTTGNAATAGGTTATGGATGTACATNACTCGCAACTACGT
GCAAANAGACTGTGATATTCTACCAACTGAAATANANGCTGTAGATGTNG
AAATNTATAGAAAGTTTTGTTAAGTACANAGTAACTGAACTATAAAATNT
GTGATCNGGGTGNTNNTTTGCATGNTGAATACANANGNATACTGTATAGG
ATTTTAGAAATGTTTGAGCCTTTGAAGAACTACTTTGTAAATCAACCTAA
GTGCCCTACAATGGTANCGAACTTTTTGTAAATGANTCCTCTAAATTTTA
TTTTGTTGCATTTGTTNAAAATCAGTTAGAAATCTTNAATCAAAGTATTT
AACGAATGGAGAGCCAAATCTTNATNTTTTGAANGTNTNAGTGACAAATT
NTAATTATTGAAAACAAANCTGCAAATNAGAAGNCATTGAAATTGNGTCA
CTACAAAAGGAGAACTAANAAAAAGTGAATAAATTATGAGAACTTCAAGT
AGTGTACAAGATTTANTTTGAAATTCTANAATTGCACTTAGGAATATCTC
GANTTGAGGGAANAATCTTTTGATGGAGCTCCCGTTTTTAATTGGACAAA
TTTATATTCTGTACCGGAATGGAATGAAATTGAAGAAATTGACCTTACAA
TTTTGCAGCGTCTAAATTTGGCAAAACACTAAAA
>rnd-5_family-8480#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
GAAGTGGAAATTTTGCCCAGGATTTTGTCAGCACGTNGTCAGCAACCGTC
CCTATTTTTAAAACTGCCCCTGTTTTTGTTAGTAACTGCCTCTTTCTGCT
TCTGTACCTCAGCTTATTGCTTACTAACTGGAAAGCCTTAAGGGAAACTG
CCGCGTCGTCTAAAACCTGCTGCGTTGTCTAAAGTCCTGAGTTACTTCCC
CTGCCCCTTCACCTATAAAAACTGTGTACTTTTCTTAGCCGGGGTCCAGA
CTTTTGGGTGTGAACCCTTCTGGGCCCGCCGGCGTAATAAAGTGTGTTCC
TCCGATCCCCTGAGTGCCGCTTGGGTTTCTTGTCAGGTAAGATTTTC
>rnd-5_family-5760#LTR/ERVL ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AGGAATGGGTAAGGAGAATGAAGTATCTGTAAGGGAATCCCAGGGTGGCC
AGCCACNTCTATNTGGGGTGGTGTGGCACANCTGTTNGNTGCTTNTGGAC
CTCCGCGTGAGTANCGGGACGCCCTGAAAACGCAAAATGAATTGTTANCT
GAAAACCATATATCGCACTGTGGTAAGGAAGGGTGGCGGACAGCCTATCT
GGCATAGTGGGNTGGCCGCTTCTNTGGGCCGCTCATTTGGCAACGGAGGC
CCAGCTAGCAGCAGAAGCGAAAATTAAATGGCTAGGGGAAGAATTGCAAN
TAGAAGAAGACATGTGACTTTCNACTTCTCTCCTCGCATCTCACATAGCG
AACAAAATCGANNACCAAGAGAACAAAAATTGAAGCATTAGNATGTAGAT
TTGTCCACCTAGGGAGAAAGANATGGAAATGACGAAAAATCAGAGCTATC
GTANCTAAGCCCGATTGGGACGTGAAAACTTGGAATCCCTGGGANTGTNA
CGAAGAGGAAGACTNGGTGACAGGAGGTCNTTGATGACATCGGGGNATGA
AGACATTGGCAAGCTCGCCCTCGCGTACAGGAAAGCGAAAGCTNAACAAC
TGCAGCAAAATGGGAGTCGGCCGATACAGGAGATTCTCACTATCAGGGTA
TACCGCTCTCGCTATCACTATCTCACTGCGACAGAACTCTTAGAGATTGC
AAAGATCTTTAAACAACTACCTAGGGAACCCCTGACTGCTTGGACGGTCC
GATTGTGGGACACAGTGGATGATGGTATTTCCCTAGCCGGGAATGGAGCA
GAGAAAAATGAGNAACATCACCACCCACCCAGCCCTGCAGCGACACCTTC
ATAACGCAGGAAGAATAGCCTCGTGGACTGGATCATTCTAGCTATGAGAG
AGGTTTGGCCTAATGAAAGAGATTTACCAGGAGGGACAACCTCCTGGCGG
TCAATCGAAGAGGCCCAGGGGCTTCTCCGAGAATTAGGAATGAGNCAAGC
NATCACCCGCTTTTGCGGATAAAGCAGTTTTCACTGCCGGGATGAAAAAT
AAATTGCTACGGGGTGCACCAAGAGAATGGCATNGCCCTTCGCTGTCTTT
NTTGAGTCCTAGAGTGGGAGAAGATGCGTATAATGTGGGANAAGCCATCG
CAGATTTGGAAGAAAACCGAGCAAACCAGGGACGGGGTATGCTTGGGAAC
CCGACGAGGGCAANCAAAAGGGAAGAAGAAAACCTCACAGGGGAAAGAGG
GAAAGAAGGGGAAAGGGATAGAGATAAGAAGCACATANTAAGCAAATGTG
GCATGATTTACTGGGAGCAGGAANACCCCGATAAAAAACAGGCAACCTAA
TGCCGTATTAGCAGCCTTATAGAGGGAACTGCAGCCCGAACAGCAGTTCC
GTCCCTTCCCTTCTGCCCCTCTAGCGGAAGAGGAAGACTCGACCCNTGTA
CTTCTAATGCCCCGGCCTATCAGGGTGGATCCCACCCAGNCCCCAAGACT
AGGAGTGAGGCCGAGGTTGACCCCATGTTTGAGCAATAGGGGGCGACCAG
GGGCCCCATATTGAGCTCATCTTTCGCTGGTCCTAAAAAATAAGCAGACT
ATTGCCTTACTAGATNCTGGGACAGAATGTACCTTAATCCATGAACAATC
CAGAAAGACNTCCGGTCAACGGGCTGCCATTGATGGTTACAGGGGCCANA
NGATCCCGGTAAAAAGGACTTTAATACATCTAGGTATCGGGAAAGCTCCC
CCCGCTCCATATATGGTGTTTATTTCCCCTATTCCAGAAAATATTTTGGG
CATGGATATTCTGTTAGGAAAGACTTTGCAAACTTCAGTGGGAGAATTCA
GATTGAAGGTGCGTGTAGTAAAGGCTGTTCTCAGAGGAGAGGCAAAATGG
GAACCCGTACTACTCTCTGCCCCTAGGCAGGTTGTCAACGTTAAACAATA
CAAACTNCCNGGGAGCATGCGGAATAAGTGCAGCTATTGAGGAACTGGAA
AGGTGCTTATTATCTGGCCAGCTCAAAGCCTGTTGTCAGTCCCGTNTGGC
CTGCATGCNAANCAGACGGCNCCTGAAGCTGGTGACNGCGGGCTACCGGC
AACTGAGCAAGGTAGGTTCCCNGGCTATACANGCTGCNGTNTCTNANATN
ACTCAGG
>rnd-5_family-3034#DNA/hAT ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
ATAAGTTTATGTCATTGTTTAACGATGAATATATTTTATCTGTTTGCCCT
GATTTTGGTTTTGCAACTGAAATCAATATTGCTTTTGATAATTCAGATTT
TAGGTATGTTTCCCATTTTATATAGGGAGCATTCACATTTTTTCCTCTCT
GCTTTTTCAAGCTTTAATAGTATTTACAAAGAACTGTAGCCTATAGCGAA
TATTNAAACACTGAAAACGCCAGCGAACATTATTGGATAGTATTCGAATA
ACNTAACATTCGGATCTCCTAGCAAGGTTAACAGACTNCACTGATTTGCC
AATTTAAGGACTTATTTTGCTTCCAAAACTTATTTCTTGGAACATCACTC
ATAGGATTTGCATAAAGTATACTATGCATATAAACTTATTATATTTATTT
TATTTGCAAGAATGACTCACTGTTAGCAGCAGACAGGGCCANAAACACAC
TTATAACACGGCAACAGCTACAAGCAAGACTGACTGATTAGACGTGGCCA
CCTCTCTTCCATGCGCTCCTTCACCTTCCCGGNAATGTCGACCTTAACCT
TCGACTCACCGGTCAGCGTTTCCTGCTCCTGCTTTCGACTTGACGTCAGT
GGATTCCTTCAACCAGTAACGTCTCTATGTTGATTGTTAAGCTTTAATTC
TCACAGGAGAATTATAATACTTTTCCCTGTTTTCCCGATTTCTCGACTGA
TTTTTCTCGGGATTCGGGATTCGGAAAAAGCATAANATTTCCCGAAAAAT
GCCGGGAAGGAATTCCCACATGA
>rnd-5_family-2476#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
TGAATGAACGATGGAAGAAAAAATGGAATGNAGAGGGAAGGAATACAGAA
GCAACGAANAGAAAAGCAGAAAAAAANAATGTTTGTGCATCTATATGAGT
AGGTGTCTGTTTAAGTATAAGAGAGATAACGTGCATCCACACACTCCCNT
ATATAAAAGGCCACAACAGGGTGTACAAAGATGGANCTAGGCCAGCGGCA
AGGACAGGTAAAAGGGAAACTCAAAGACCTATCGTATTAGGGTACTCTTG
CCAACTACTCAGATGAGCAGNAGATAAGACAGCATTTTCCATACATACAT
CCTGTGCTTTAGNTGAGCTGCAAATTTGATTTTCATTTTATAAACTGCTG
AGGAATCAAGAAAGNGTACAAATTTTTATNCAATTCTGTCAATGAAANTA
GGAAAAAAACCTGACAGNTGANGCGGATTTACTGAANATCCTGGAAAAGA
NAAAACGACNCCGTCGTCCTCGGAAGGGAATAGCTGCGANCACTTAGCAG
ATACATAAAATTATCGAGCAAAGTGAGACACACACTAGAATTCTGCACTG
TCTCATCTGTGGAAANTTCTAAAAGCATGCAAATATTCTGCATCTGTGCT
ACCCAATANGAAANGCAGTGAGCATTAAAAATGTGGAGATGAAGAATATT
TATCTGCCAGGGCACATGGGTTTTAAAGTACTGTGGAGGAGCTNTTGNGC
CAAGGNAATGATGCATGAAGCTGA
>rnd-5_family-3179#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AATATATGTAATTAAAACTACTAGATATAAGAGAAACAATTCTATATACA
AAGTATACAAAAAAAGCAAGATATTTTTGGTGGAGAAGGCTTATAAAAGG
CATGAGGATATGGTTTTTGCTNAGGAAAATAATTTTTTTCTAGTTTAGAG
GTTATTTAAAGNTTGTTTCAAAATGAAGTGAAAAACGATATAGATAAAAC
TAAATGGATAGAAAGAGAATGAGGAAAAAATAAGGGAGGAGAATCATGGG
ACTCATCCCANCAGGGGGGAAGTCTTTAGATGGTTATTTAAGAAATCAAA
TGAATAAAATGGAAATTGATGGGTTAAAACAAAGGTCTTAGTACAACACT
ACCGAAGGTTGGATGGGCCAAAGGGAGCCCTTGCTGGTTCCCCGACATTA
AAGAGCCCAAAACCNGTTTGCTGTATTTCCTAGTTTGGAGAAATTTAAAA
AGTCAGAAGGCAAAGATTACAATGAGAAANCTGACCAGAAATTTCCTGGG
ACAANANTNAGGCAGGTTAATCAAGATAAAGACTGACAAANGGGCNAGNG
TCCCTTGGCTCGACCCCCTGCTGGGAAGCCAAAGCCTTTTGCACAACAGA
GGGTAAAATGATGATGAAGAGAGAGTTTCTGGAACTAAAACGTAAAAATA
AAGTGTTTATAGGACTACGAAAGTTGGNATGTTTGAACAGGCTTCATGTG
AAGTGGTCGCGTCTCCTTTACCTAANTGTATTATGGGAATGGACACTGTA
TCTGACTGGGGAATGTTTCTCCTACCTAGTATTGTAAAACAGAAGNCATG
TAAATCTGCCCTTCAAGCAATATTAATTGGACACGCTAAATGGGAACCAG
TNAGATTGCCCGAGCCCACAGAGTGTAGAGTAGAAGCTGGAATGCTGGTA
GGGACAAATTCTCCACTTGATAGCCCTTTGTGGAGTGTTTACTGGGNCTT
ATGGCAAAAGCCTGTGAGCACCTCCCAATGACAACTACTGGGACTCTGGA
CTAGAGAATTTCCGCTTGAGGGGCATTTACTGCCTTGCTATGGACGTTAA
CTGAAGCTACCTCTATGCTGAGGGACACAGTACCCACCTGAAATACCCAT
GCTGTCTCGGTGACGTCAANTGAAGCTACCCCATTCTAATGGAGATAGCG
GAGTCTAACAGAGTTCCATNATAAAATGGAAATGGTTTATATAGGATTAT
GCTATCTGGNGNGTGCGAGGAGGAGATGCTCATGAGCGGGGAGCCTCTTT
CCCTAGGACTGACTCTGGAACTGTGTGAGGAGCTGCTGGATTCTACAGTG
CCCAATAAACAGCTCTCACCTGACTAACAAAGAGCTGCTTGGTTCCAAGG
TGAACGGACAACGTCCTGTTTGGAAGGCTGCTACTCTGAAGANGAGTCAA
GAAAATGTGTTTTTGTTTNTTTTGAGCTGTTTAAAGCTTA
>rnd-5_family-10374#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
GAAGATGGAGAAAAAGAATATAAATGTATTTATTACCACTGAACTGTACA
CTTAAAAATGGTAAAGATGGTAAATTATATATGTATATTTTACCTCAATN
AAA
>rnd-5_family-2935#LTR ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
CAGTCAGTATCTCTACAAGGGACTTCCCTGGTTATTAAGGAACCTCAGTC
CACTGGGAAAGTACCCCNGAAGGTCGCCCGGGAAGGCAACTGCCCGGACC
GTTTGGNATNNCACGTTGTCCCCTGTGAGATAAGTGTNTTCTAGCTCCGG
AAAGATTTAGAATTNAATATAGAAATGTTTNAGAGAAAATCAGACCCGNA
NTATTAATATTTTTGTGGTAAGAGAATCTGTNTGATTTACTTTATAGGAA
TCTGCGATGTTTATAGCGATTTTGANATATTATCGNNNTTAACAGATTAG
NTTTGTAATTCTAATTNAAAATGTGTAGTNGANTTAGACTTGTGATTTTA
AGTTGAAATNTTACTAAGTTTACAAACAGTATTGGAACATTTAAGAGAAC
TTAAGANTTACCGTATTTATGTTTAATTTATTAGATTTATANGAATTACT
TAAGTACCTGAGAAGATTTGTTGNNCAGATAATTGAATACTAAAAATTAA
AAAGGAAANCGAATATATTAAATTTATAAATGCAGTTTAAAATGTTTAAA
GGNATTTAATAAGCTTTGTAAATGGGGCCGAACGTTAATCAAAGNCTCCT
TAGAAGTGATTGCTAAAATTNGCTAGACTTNTAAATAGAATCAGAAGATT
TNTAAGTTGATATCAAAAANTTTGAAGAAGAATTACAGTTGCTTTAAATT
TNTGACTTTAATAAAATGAATATTA
>rnd-5_family-11594#LTR/ERV ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
TACCAGTGAGCCGGGAGGNCACGTTGGAGGCANTNTCAACCTGTGTCCCT
GACCGTAGGTCCCACTTGGGGAGCGNAGCACTTCAATTGTAAACAACGCT
TTCTTTCCAGGGATCTACATNCGCNCTCGGGATTGTACTCCTTGTATGGA
AGCCAGGCATTAACTTGTTTCCCTNGNGAAATATGGTNATTTGCANCTTA
GNGGTGGTCATAAGAGACCTTCAAGTGTTTAAGGAAACACTACCAGTGGN
TCAGTAGCCCTCAGATAACTNGGAGATCTCTCCAAAACGAGGCTACCTTN
GTTTCCTAGGGAGANCTTCCTGGAGGGATAACTGACTCATTATTTATGCG
TACCCTGCGGGCAGTTATTCCCACNATGGGAGTCATCCAATTAGAAAAGG
TGGTACGAAATTTGTCCCTGACTTTAGCTGAAGTGATCAATNACGCCACC
TCGGCCCTGGAAGACATTCAGGTCAGCCTCAACTCACTGGCCAGGGTTGT
TACGGATGATAGAATTTCCCTACTGGGGCCAAGATGGAGTCTGTGCAATC
GCTAATACATCCTGCCGTACCTGGATTAATGCCTCGGGCCAAGTGGAAAG
GTCAATACAGAAACTTAAGGAGAAAGCCACNTGGCTTTCTAAGGTAGACC
CTAGATGGCTTATGGGATTTGTTCAGCTGGTTGGGTCAGGAACCCTGGAG
AGACATGGCTGAGGTCAATACTGCAGGTTGGCCTCATCCTGCTGCTTGGA
GTCCTGTTGATAGTAGCCTTAATTAAATGCTGTNTGAGACAAATTGAATG
GATTTGGTCCCAGCCTCTGTCGGTCAGATTAATCAGAGTGGCCGATGGAG
TGGCATACTCATTGGGAAATNTCACCAGAAGCCAAGACGGCATAGAAACG
AGGGGTAGATGTT
>rnd-5_family-406#DNA/hAT-Charlie ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
AGAGGTTGCAAACTGGCGNCCCCGGAGCCAAATCCAGCCTACGGATACAT
TTTATTTGGCCCGCACGATGTTTTTTTNAAATTTTGAATTTAGTGCCAAC
ATTTAAAANTGGGAGATTTCGCATANAAATNTAGATTTCCAGCGTCTCTT
GGAAAATTCTAGGGTCCCGGTGGCAAGCTGAGCGGCAGCTGCCT
>rnd-5_family-170#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
TGGCTCTTTGGCACTCTGGGATGCAGAATTGGCAGGAGAGGGGAAGTAAT
GGGAAAATAGAGGGCTGAGGTGAAGCCAGGGCTTGGTGGGGGCTGCAGGG
TTGGAGGAAGGAGGTACTAGAGGACTCTGCAAAGTGAGAGGGAGGAGGGT
GGGAGAGGACAAGGCAATTGGGAAGTTTCTCCGACTACGTGTCCCCTTCC
AAAGGTTTGAGAGCTGCAGNGGAAGACTTTGAAATAATTTTCATTAGCTT
TTTGGTGGCTGGACTATGTGTCTTTTTGTGACACTGACTGTGAGGACCGA
GATTTCAGTCAGGTTATGTGTCCTAAGAATAAAGACAAAAACGATAGCTA
ACGGGTACTGAATGTTATGCACTAGGTATGAACAGAAATTATGAAACACC
CCATATTCCATNTANCAACACTCTTCTGCCTTTTTCTTCTTCATATGGTA
AGCTCTGAGCTCCTCAGGTTGCCTTTTCCTCCCTCACTGCTGACTAATAG
AATTTCAGTACTTGGTCTTAAAACCATGAATCCTTNNTAACTGATGGAGA
AAGAAACTTCAGCAAGAGAAAATGTTGAAAACGTCTCTGCTTTCCTCTGC
AGCTGCGGAAAAACAGATTCTATTCTGCATNANAAAAATCCGTCCTTGCA
AATGTTATTTCTAACAAGAGTTTTAGAGACTTCAGAATAGTTGCAATGCT
TGATGGTAAATACCTTTCACTCCTTTAAAAACTCCGTGATTCTGGTTGTC
TTACTTAATAATTGATTGCCCTGGCAATAATATTTAAATTGACATTCCCG
TTTTCTGAAAGATATACATACTTGTGAGTTCTCTTTGTNAAACCAGAGGG
CGTGGGCACCGCCTTCTCTCNGCAGGAATGAGGTGGAAAAACAACCAGGT
CTCTGTTAGAATTCTTATTTAAACAAAGAGTTTGAGAACCTTTGTCTCAT
TTGAATTAACACGAGCAAAGTGTTGAGTTCTTTACCTGGGTTATCTTATT
AATCCTAACAACCTCTCATGGCAGGCTCTATTGTTATCTCTCTTATAGAC
AGGACAATGAGACAACATGAGTCTGGCAAAAGTGCTGAAGGACATGCAGC
TGGCAGGTGGCAAAGCTGGNAGTTTGAGCCAGGTGGTCTGACAGGGACCC
TCTCGCCCACAGTGCTGTGCCACCTGGGTGTGGAGCTTCATTTTTTCCTG
TGGGTTGCTGATCTGGGAAAGGAGGATGGAGAAACAGGGCCCTTCTGGAG
AATCTAAGCATTCAGAAAGGAGGAGAGAAAGACTTCAGAGGAAGGGCAGC
TTTGGAGCACCTGGAAGGAAGGAATGGCCCGGAAAGGAGGAGAGAATTGA
GAGTATTTCTGGGTCAGGGTCCAGGAGGCTGCGGGGTAGCAGGGAGTGGA
GAAGAGCCCAGGGAGAGGTTGCCAGAATGACTGTGGTGGGTCTGGCAGGC
AAAAGGCATGGGGACCTTAAGGCCAATGCCATGGACATGGCACAGCTCAG
CTCAGGGGGCACCACTTACCAGGAAGCCTAGGTGACGAGTGGCCCCTGGG
CTTGGGCAGCGTGGAGATCTGGCTTAGAGGAGCAGCCAACTCACTGGATG
AAAAAGAAGAGGGTATATGCAGAAGAGCCTGATAAACGCTTTAATGCTCT
GCCAAGCCAGCTGGGAAAGAGAGGCTCCATACCCGGAACATACCTACTTC
TACATTGCCTGGATGGCACAAGCACTCCTCCTAGTAATGAAAGTTGGTAC
GTTGCAAAACAGCGAGCATGATNCTAGGTTCTTCAGGTGTAAGACCCAGT
GCCCGTTTNCCTAGTGTGCTTCCCCATCTTTTTTCTGATCCTATATGAAA
CTATNCTTT
>rnd-5_family-1064#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TGAAATACCCTAGCTTGAGCTTGGCTGTAATGAATACATTTTAAACAATC
CTGCTAACTCCATTTTGCCCACCCTGAGCTATGGCCCACCCTGAGCTATG
TAGGGCATTCTGTTCCGAAAGCTTGCGGTCTGAGACACCTGGCATCTTTG
TAACCAATTTTCTGAGAAACAGGGCCCACCGGCCCGTACATCCTGTACCT
GCAACTGTGTAACTGCCTACCCCACATCCTGAGTAAAAAAACAACTTTAA
GTAGAACTTTTTGTTA
>rnd-5_family-6962#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TTTTTTCCCAAGCCAAACTGTATCCAGCTTTATTAAAGATACTTTCCATA
AACAATCATGGTATTTCAGGCAGGACATGGGCAGACAATCGTTAACAGTA
TACAACAACTTTCAAACTCCCTTCTTCGATGGACTACCAAAAATCAGAAA
GCCACTATAAAACCCAATGAAGTCTTCATCTGATGCTCTGAACAGGGAAA
GTTTAGAGTGAGGGTTGACATTTCACATTTAGCATGTTGTTTAACAACTT
TTCACGAGCCGACCCTGACTTTCAGGAAGTGAAATGAAAATGGCAGAATT
TATCTGAAGATCCACAATCTAGAAATGGAACCACTGCTCTTTTGACAGGT
GCCATCTCAGTGGCATCACTGGNAAGTCCAGATTGCCTGACACACTGGTA
ACCAATGACTGGGGGTCAGGTCCCAACAGATGTCTGGGCTTAAGGGAGTT
AAGTCTATGCTGAAAGACGGAAAGGGAGAAGAGGACATAAAAACGAATTT
GTTTTTCCATACCACAAGGCTTTTGTGTGCCAAGGTGGCCATGTGTGTCA
AAGTCAGGGAATCCCTCCTCCTGGGAGCCAAGAGGAAGTCTCTCAAAACT
AGAAGGGAAAGGCGTTTTCCCCACATCAATCCAGCTTCGGAGACATTCTA
TTAGTGACATATGCCCCTTCCCCCAAAACAACAATGAAGTGTTCTGTGTG
CTAACAACATAGCTTAAAAAAAAAAAAAGTAAAACAAAATTCTGCATTTT
TATAAAACTTGATAAAAAATAGTATTTCAAACTGTACAGTCACCAGAAGT
ACACAGTTATCAAAAATGCACACACTTCACTTGGCATCTCCAGCACCTTC
GGCTTTCTGTGCCTGGTCTGTTTTGGCATCTCCATTTTCTGCAGGGTTAT
TCCCTTCCTTGCCAGCATCAGCTTTTCCCTTTTTCCCTTTGGGTACCTTC
TCTCCCTTCTTTGCAGGGGCCTTTTTAGGCTTGGGCTCTGGCTTTGGAGG
AGCAGGTTTAGCAGACAACCTCGCGGATCTTCTCTGTGGTTCGTCCTTCA
CCTTGGCTTTATCTCCTTTAGCATCCCCTTCAGCCTTTCTCTTGGGCATG
GTGGCGACGGCGGCGGGACGTAGGCGCTGGGCGCGGGATGCAGCGGCGCG
CGGGCTTCGGTCGGTCCGCGGGGTCGTTCTCGCCTCCTCTTCTTCACACT
GCT
>rnd-5_family-897#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
TCCGGTTCCAGTAATGGCGAAGTAGCTTGTATTGGACTAACTTTCCCGCA
GATAATTATAAACTCTGGACAAAATATAAAACGAAAATATAACTATTTGA
AGGCACTGGAGAGCGANCAAAAGCAGGCAGAAACTGAAGAGATTTGACCC
TTAAAAGAAGGAAACTCACTGGGTGAGATCCGCGTTTACNTGGCTTTTCC
CCTGAGGGCACTCCCCAGTCTATGCGGCGCGGGATGGCTAGAACTCAAGC
AGAAAGCCGCAGTCTTATTGGCTNGAGGTGTCAGAGGATAGAGTTTGGGG
CTGCTAGAGNAGCTGGAAATTGAGGAGGGAAATCCGAAAAGAAGGGAACT
GTGAANGGAGCCCCTAAAATCCTTGACTGACCCTNAAACTGGCATGCGTG
GAGGGATTCTAAGGACCCGGAGGAAAGTAACAAGCAGAATCAAAAACTGA
ACAGAGATTTCAGCTGCTGCCCACCGCAGGGGAGACAGAGTTTGGAGTTT
GAGTCCNGCCAAGTAGAAGCGGTACATTTCACTTGGCAAAATTTCAGGCT
TTTCGTTGAAACCCATAATGCCACTTGGAGTAGACCATGTCCAAGGTAAG
NTAACCTAAGANTAAGACTAAATTATTGAAACAGANACACCCTAAAAAAG
NATGAAATCNAGCCCCCANCAGTTCAATGTTATCAACTGGTGATTAATCT
GTACAGTAGAGCAAAAAAAATCAATGCTCTTTGAGGACAAAATAAAATCT
ACAGCCACTATACTGTACAATCCACAAGGTCAAAAGTAAAATAAAAATTT
AGTAAATATGTGAAGAAACAGAAAAATGTGACTCAATGTCAAGAGTCACA
TAAACAGCAGTCAACATAAAGCAACATGAAATAAGCCACATGTTGGAATT
TGTAGACAAGGGCTTTAAAGCATTTTTATATAA
>rnd-5_family-6077#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AGGGTTAATCTGATCAGGTCTGCCTGCCTTGCTTGCTTTTGGTCGCTTGC
TTTTNGTTATTGTTTTCCTTTTTCCATGAAGCTGAAGGCCACGGTAGCTA
AAGGCCCGCCACTGAACGCTGAAACTTAACCTTCACTGGCTNCTTTANAG
ATAACATTCCTGGATAGGTCACCATGGTAATGGTCGCTTCGGTTGTTTTT
CAGGAACTTGGGCCAGCTCCTGTCCAGTTCAAACCGGTTGAGACCACCGA
CCCTTCAACTGGGCCTGCGCGAGTGCCCGAGAGGTGGCCTTTTGACGTCA
GAGGGCCAAAAACTCCACCCTCAGATCATGCTAACGCCGCCATTTTCTGT
ACATACGTCCTATGAAATGCCATGAACCCTGACTATGCTTGCGCAGAACG
AACCTGTTACTTCGTTTTTCCCCACCGCCAATCACCTTTCCCCACGCCTT
AGACCACCCCGCTTCTCTAACCCATAAATATCCCTAAGCCTTATCTTCGG
GGAGGTAGATTTGAGAGCTGTTCTCCCGCCTNTTTGCTTGGCGCTGCCTT
GCGAATAAATCTTTCCTCTGTTGCAAAACCCGTGTCACAGNAACTGANNT
ACTGCATCGGGCAGAACGGACCTGGACCTG
>rnd-5_family-610#DNA/hAT-Tip100 ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
GCCTCAGGGGCCCCGTGCTTTNGAGCGCCTTCCTCGAAATTTTCTAAGTC
CCCCTCTAGAGTGCCCGGGACCGGCTGGGGCCGGCAGTGCCGTCCGGTAA
GGGCCCGAGCCCAGACAGGATCTACATGGGCCCCGGTCCCCGTTTCTCCC
CTTCGGGGCGCTCTCCGACCCTCTACCCCCACATCCGGGGTCGACCAGAT
GCCCCGAGGAGCTCCGGGACTCGTGCCTATGGGGTCGTCCTGGGGCCCCA
CGGTCGGGGCCCCGGTTCCAGGAGGGCGGCCTGGCGAGCGGATCACTCCC
GCTGGCCAGCACGGTATTTCTTTCGCGGGATCGCATGAGATTGAGTCGCC
AGAATGGTGCTGACACGCTGATTTTGGGTGACTCAAATTGTTTATATAGA
CAGAGGCTCCCAAAAAAATATTTGCCTGGGGCCCCGTACACCCTAGGGGC
GACCCTGCCTCAGGCCCATTACATCAGAGTTCAGAGC
>rnd-5_family-1105#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
GATTGAAAGTCTNTACCACAGGCCTTTCAGGATCAGACTGAATCACACCG
CTGGCTTTCCTGGNTCTCCAGCTTGCAGACGGCAGATCGTGGGACTTCTC
AGCCTCCATAATCGCATGAGCACGATTCCTATAATAAATCTCTNTTTCTC
TATCTNACCCGTCTGTCTCTCTCTCTCTCTCTCTCCTATTGGTTCTGTTT
CTCCGGAGAATCCTAATGGATTCAT
>rnd-5_family-2781#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AACTAAGAAAGAGGAAGACATGGGATCCAGGAAATAGATGGGATCCAACC
CAGGAGAGGAACAATAAGAGAAGTCCCAGGATGACAGCTGTGCAGCAGGC
CTAGAGAGCAATCAGTCCAGATTGGAGCAGGAAGACGGAGGGACTCCAGG
AGGAAAGCATCTGGGGAAAAAGGGGGATATTCANATGGATTTTATACTNT
CCTTAAGAATTTGNAANAACTTAAGAANTTAATAAAGCAGACAATGCAAG
GAAAAAAAGAAGGACAATTAGAAACTCCAAGAAAAAAATCGCCAAAGCTG
TATAAGAAAAGNAATGTAATCNTAANATACTATTCGACTTGCAGTGAACA
ATATTTACATAGACATAATAATATAAACACANTTATTNCTTTTACTTTCA
GAATCAGACTTACAGACAAAGCACGGAAGACTTAANTGTGGTTACAGAAC
AGAATGCAAACGTTATCGACCTTGACAATATGAAAGTAAAAATACAGACG
ACAGATTGGGAAGTNAAGAGCGGGAAGGGGGAGA
>rnd-5_family-7252#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAAATGCAAATCTGACCACGTGACNNTTCCCTGCTTAAANCCCTTCAGAA
CCCTTCCAATGGCTCCTCATTGCTCTTAGGATAAAATCCAAGCTCCTNAG
CGTGGCCTGCGTATCCCTCCGTGGCCGGCACCCCTGCCTGCCTCTCCAGN
CCCGTCTCCTNCCAAGCTCCTACTCCCTCCTTAGTTCCCTAGNAATAATC
TCAGCTNCTNATTTCCCATGCCAGAATGTTTCCCANCTNCGTGCCTCATG
CTGANGCGTGCCTTCTGGTCAGGACTGCCTCTCCCTCCCATTCTTTTTTA
CCTCGCCNGTGCCTCCATATCTTTTAANACGCAGNTCAGCTGTTCCTCCC
T
>rnd-5_family-4415#DNA/hAT-Tip100 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AGTACCCAACTAGATCCGGGCAAGAGGGCCCCCTACCCTGGCCCTGCGCT
TTAGAGGGCCCTGCATATCACAAACACACACAAAANNAATTTATTAAAGA
ACACNTGGGCGCCTCTGTCACTCGGGATCCGGCGCTCAGCGCCGGCACGG
CGCGANCCGTAACCCTAAACATCCACTCTCGTGACTAACACCATTCAGGC
CCCAGGGAAACGCTTCTCCACATCTCTTGCCCTATGTCCTCGAAACAAAA
GGCGACTGCGTCCGAATGCCGTGAAGTGTGCGGGTTGTGGNACTGCCAAC
TTCGGAGAGGAACACTGCTTTGGAGTGCGGGGAGGATTTGAGCAGCGGAA
GCACTTAGGTAAGAGAAAAGACAAATTAACTTGTCNAATCCTTCCTCTCA
GATAGCATGAATGCAATAGATTCTTGCGTAACGAAGCATCATTTCCCAGN
AGCGCCGAGCGTCCATNTTCTTGCTTCTCTTCGCGTTCCAATTCGTGGTT
CCAGAGGTACTCAAAATTAGTGCAGTATTCGCAGCAGTCGCAAATGGCGG
CTGAGGAACATTTCGTAATATTAAACGATTCANATTACTCTTAAATTTGC
ATANACGTAGGTCTAGGCATAACATGCNAGAAGCAGATTGNTGCCTGATT
CTTTTTCTCCAAGNCTCCGCAAATGCTAGAGGA
>rnd-5_family-1861#LINE/L2 ( Recon Family Size = 30, Final Multiple Alignment Size = 17 )
ATTGAGTCTCTGTGATTCGTACCTCCCGACAGACTGNAAGCTCCTTGAGG
GCAGAGACTNTGTCTNATTTATCTTCGTATCCCCAGTACCTAGCATAGAA
TATNCCTCAGTGAGNGGAGGTCTACTGGATAAATGAGAATAATGATGATA
GCTTCC
>rnd-5_family-88#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
GAACCCACAGCATTCTCTCGGGGGAGCTGTGCCTCACCAGCACCCAAGAA
AAAAACCCG
>rnd-5_family-434#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAGAGAAAAANTGTCCCAAACCTGGTCTGGGACAGAACCTTTTTTGTGAG
TGATGTAATTAAACAGCTCCCTTCTGGGAAGAAATTAGCATTCCTGATAA
AATGCTTAAGCAATTTTCTGATNAACTTTAATAGGATTAAGAATTCGTTC
TGGGAANCTACAAGAGTTTACCTACCCAGCTGATCTGCCAGTCACTTTTC
AGGCCTAATGATCTTTAACCAGAACGTTTTTTTTTGTACATTAGTCTAAC
AATGGATTTACCATCATTTTCTCTTCTTCTATAAAATGTCCCTGCCAAGA
GTGAATCTTTGAGTTGGCCTTCTAGNAGCCTTTTCCCTTGCAGCAAGACT
GTAATAAAACTTTGACATATGCTCATGGCTAATTGACTAAATGGATTTTC
TG
>rnd-5_family-3068#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
ACAGGAATTTGGCAATATCTATCAAAATTNNAAATGCACGTATCCTTTGA
CCCGGCAATTCCACTTCTAGGAATTTATCTTACAGATGTCTNCACATATA
NGAAATCACAAGGTGTTTCTTATTGTTGTAATAGCAAAAGATTGGAAACA
ACCTAAATATCCATCAATAGGAGACTGGTTAAATTATGATANAGCAATAA
AGTGGAACGCTATACAGCTGNNGACCAAAAGAAAAAAAAATCAAAATTTT
TTAATACGATCTCCAAGATTACTCCATTANGTGAAAAACGCAGATATATG
GTACANAANATNGT
>rnd-5_family-4264#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAGGAAAATGGATGTGCTGCGGTCAAGAATAGGCCGAGGCAGACATCCGG
TCCAGCATGACTCAGCGAGTTTGGAGCGCAGGCGCACAACTCCGCNCATT
ATGTAACCACGCCACGTGAGGCGCATTAGGTGATCACCCACGTGAGCTCG
TGCTTGGCTCGGAGCCACTATTGTCTGTAAAAGGTATAACTACCCTGCTG
ACGCTGTACATACGGCTTGCACCCAGGCTCGCTCATGGCTCACTGCGCCC
AGAGAGAGAGTAAAGCCATGTTGAAACTGTCTGTATTCCTCGAGTGTTTT
TCCAGCTACCCGCCACTCGCCCACCGACTCCCCTCGGACCTCAGTTAGAA
CCTGACAATTGGCATCGCGAACAGGATCCCGAGGTGAGTGAGTCTTCAGC
CCCTAGGCTCCCGGGTCGGCCNCGCGGCCGCAGCATGGGCTGTGGTACCC
GGTGGCAGCNGTGCTGCTNGGATGGGCTCCGGTGGAAACNTGGGCGGCGG
TGGACGGGTCCCCCGTGAGCGTGGAGAAGGCGCTGAAGCAGCTGGAAGCA
CACAGCACCGAGAAGGAGCGNGCCTTTGCCGGCAGAGTCGGATGGGCGTT
TTTGACTGCACTGCAAGAAGTACACGCCCAGTCCCTGNGGGATGCAGTGC
AGGNAAGGGNCCTCCAGGCACAGGCGGGNTGCCTGGAGGCCCAGCTACAC
AGCTCGAAAAGAGTTAGAAGCTGCCGTGAATGGGGACCTCCAGGTGCAGG
AGGGCGCTTGGAGATCCGGCTACANAGCCTGGAAAAGGAGTTCGAGACTG
CTGTGAATGCAGGCNTGGGTCCTCGTCTCAGCCGGAGACCTCCACTNAGG
TCTGGGTCTGNNCCANAAAATAANNGTAAGATGCCCCGCCTGCAGAGGGA
CCCCTCCATCANGGNANAAAAGGGGGCCCCAACGAGTGGCATGCTCACAG
ATGTGNACAGATTTGATNTNNGCCGGGGCTGACNGAGAGAAAATCGATAG
GCAGCCCAGTGAGGTNCTCTTAANTTTGTNGAGACAGTNGTCTCTGGAGC
NGCAGTTCCAGNAAATGCNCAAGGGGGAGAAGGATATTNCTGCATGACCC
AGTCCTGCCTGGGCGCTCCAGCTCAAAGACTACGTNCTGCAGCCAGGTGG
GGGTGTAGAGCCTTTTCTGTTTGATTACGGAACTGGCTGAGGTATCGGCT
TGGGGGTACACCAGAAAAACAGAGGCCACCTGTGGAGCTGGCAATCCACT
GGTCCCCCACCAACATACAGAAAGTGCTGGTGCTGATAAACACCAGTGC
>rnd-5_family-8918#Unknown ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
TGGGGGCACTNTTGGGGCCGGATACACAGCCGAGTGGCGGGGAGGCGGCT
GGTGGGTGGGTGTGCTATCAGGGATCTGCACCGCCCACGCNGGGAGCTGG
ATGGGTNTGCTATCCGGGCTGCCTCGGTCGTGGCGGGGGCAGGGTTGGGG
GCGCTGNCGGAGGCTACAGCGCAGCTAGNAATGGGGGTACAAAGGTGGCG
GGAGGTTGGTTAGGNTCGCCATCCGNGGCTGCACTGCCTGNGGCAGGGGG
CGGGTTGGGGGCGCTATCCGGGGCNNCACTGCCCGATGGGGGGCNGGTTG
GGGGCGCTATCCGGGGTNNCACTGCCCGCGGNGGGGGGTGGGTTGGGNGC
CNTATCCGGGGGCGTCACTGCCCGCGGTGGGGGNCTGGTTGGGGGCGCTA
TCCGNGGCTGCACTGCCCGCGGCGGGGAGCNTTGGGGCGCTGTCCCGGGC
TGTACTGCCCGCGGCAGGGGGGCGGTTGGGGGCGCCATNGGGTGCTGCAN
TGCCTATGGCGGGGGCGGGTTNGGGGCTGCTATCGGGTGCTGCACTGCCN
GCGGCGGGGGGTGGGTTGGGGGCGCTATCCGGGGCTACGCTGCCCGCGGC
GGGGGGTGGGGTGTTGGGCACTATCCTGGGACTGCACTGCCGGCGGCAGC
GGGTTGGGGGCNCTGTCGGAGGCTGCACTGCCGGTGGCGGGCGATGGAGG
TTTCAGTGATAGCGGTGGTCTCTCAGAGAGGAGTGGTTCTCCTCTCCCCG
GACTCTAAACCCTAAANGGCCATCTCCTCCTGCATGGCGGGCACACGTTT
NNGTGAAAATCCTGATCACAGCAGGGCACCCAGACTCATCATGGTTCCCA
GGCTCGAACCCTCACATTCTGTGTTGCAGAGACTGCCAAGGATGCCCAGG
CATGCAGTAGCAGACACCACGGGGTGACAGGGCCCTGTGGGTGGAGGTCT
CAGGAATGGGAACCAGCACATTGGTGGGGAGGGCTGGCTGGGGCTGAGTT
TCTGCTGCTCCTGCTTCCCGAGCACAGCCTGGGTNGTCCCAGTGGTTCCT
GTGGAGCGGGAAGCCCAGGCACCATGGTGTCTCCAGTCTCTACTCCCTAG
CCAGTTTGGGCCAAAAAGAGATGCTGTGGCCTTTGGAGGGTGGGTGTGAG
TGCCTTCCTGAAACTGGCCCGTGCCACCCGGTGGCCAGCATGACAAGGTG
GGGGTCTAATGCTACCACTCTCTGTGTCCCGTTCTAGGCTTTTCTGGCTT
TGCCCGCCCAGCTGCTCCGTGCCGACGAGAAGTGGAGAGCCATCCGCCGC
ATGCTGGAGGCTGGAGCCTGCGGCACCGCGGCTCGCCTCGCTGCGGTGGG
TGGCAGCGACGGAGACTGCAGNGCAGCCGGAGAGGTAGGAGCGTGGCGGG
ATGCCGCCAGGGCAGGGACGGGCGCAGAGGTGGCCAGGTGGCAGCCTCTG
AGGCGGCCTTGGTCCCTGGGTCCCCCCCGCCCCCCGCTGCTNTTTATGGC
CGGCAGAGCTGGGGTTGCCACTGCTTCTGATGCGCCGTGTGCAGGTGGCA
GCTACAGTTGAGCCGTAGGGTGGCAGTGCTGGTTCCCGCCCNTCTGTTCC
TTTTTGTCCCTGGTCCAGGGCGNTGGTCACTGGNTGCCCTGCAGCCNCTG
GGTCCCTGAGGCCGACCGCCCGGTTCCTGCCCTCCTGCNGCAGCGGGGCT
GCCTGNNTNAGGCGCTNCNGCGNGGTCTGGCCCTTAGGTCCGCNCTGGTG
GAGNGGGCGGGCAGNATCAGNGGTTGCCACCGCGGCTGCCGNATGGCCAT
NTNCAGGTGGCAGNTGCAGCTGAGCNCACGGAGCTGCAGGGCTGGTCTCA
GACGGCCCGGGAATCCCCAGTGCACCGCCCTCCCANCCTAGGGCCCGGCT
TCCTTGGCCNANGCNCAGAGCGNNGGGTNGCGGNCNCTGGGCGCNCTGCA
GCACCCAGGATGAGTCCGACTGCGCTGGTTTCCGCCNCCCTGCAGCTGCG
CCGCTGACCCCTAAATTAGGCGCCATGGTGACATCTGGCCCTGGGATTCC
TGCCGCTGGTGGGGAGTGGGCAGGCGGCATCAGGGGTTGCCACTGATGCT
GACCTGCATGGCCATTTCCAGGTGGCAGCTGCGGCTGAGCCCACGGCAGA
TTCTGGCGGGGCTGCTCCCCGAGGGCGTGGGGGTCGGGGAGTGTACCGCC
ATCCCGCCCTAGGGTCCACTTTTCCTTAGCTCCNGGCCCAGGGCGCAGGT
TTGCAGGCGCTGGGCACTGTGCANCCGCAGNGTTGNGACTGAGCGCCTCC
TGCCCTCCCGCACCGGCGGGCTGACTTGGCAGTATCTGGTCCTGGGTTCC
GTGCTACTGGGGTCAGTGTCCAGGGATGCCACTGCTGCTGCTCCATGCCA
CGTGTAGGCTGCTGCGGCGGCTGATCCCAGCAGAGGCTGTCGGAGCCGGT
CCCAGATAGCCTGAAGGTCGCCCGGTGCACCAGCCAAAGGGTCCGTTCTT
TCTTGGCCCACNCCCAGAGTGAGGATTGCAGGCTCTGGGCACTGCACCAC
TGGCATGGGGAGACAAGTGGTGGGGGGCTCCCTTNCCTGCTCCACACAAA
GCNCGGGTTGCCGGGAGTCAGCTCTCTCTCCAGCGTGCCCCAGTCTCATC
CTTGGTCAGCCCAGAGCACAGAGGCCCACTCAGTCCTGGCTCCATATCTC
GTGCCAGGCAGGCACAGAGCCCCAGAGCCTCAGCGGCTTTGTCTGTGGCT
GNGCTAAACTGGCGCCCGCCTCATCTTGACCATCTGCCCAAGTGGGCACA
GCCTCCAGCATTGCTCCCCAGGCAG
>rnd-5_family-2141#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAGCTCTTGGAAATTAAAAACATGACAGCAGAAATGAAAANTTNAATAGA
AAGGTTGGAAGATAAANTTGAGGAAATATCTCAGAAAGTANAAGAAAAAG
GAAAAAGAGACAGAAAATAGGAAATANAAATAAAAAAATTAGAGGATCAG
TCCAGGAGGTCCGATATCTGAATAAAAGAGTTCAGNAAGAGAGAACAGAG
AAAACGGAGGGGAGGAAATCATCAAAAAATAATTCAAGAANATTTCCCAG
AACTGAAGGACATGAATTTCCAGACTGAAATAACGGTACTNAGAAATGCC
NAGCACAATGAATGANNAAATAGACTCACGCCAAGGAGTNTNNCATCGTG
AAATTTCAGAAGCGCTCAGGGAGATACGATTAAAAGCTTCCGAAGGAAGG
AAAAACAGANCATGNACAAAAAANAAGGGAAGATCAGAATGACATCAGAC
TTCTCAACAGCAANTAGTNGAAGCTAGAATACAAT
>rnd-5_family-3493#LINE/L2 ( Recon Family Size = 31, Final Multiple Alignment Size = 16 )
TTTCCCCTGCTCAAAACCCTTCCGTGGCTCCCCACTGCCCTNAGGATAAA
GTCCAAGCCCCTTNNCATGGTACACAAGGCCCTTCATCGATCNGGCCTCT
GCCGACTTATCTCTCCNACTAGCCTCATCTTCACATGGCCCCTAGCAACT
CTACAGTACCAGATAAGACCTTGCTATTGCTATAGGGNTTGTNNAGGGGC
TTCCNTGNAGCCTTA
>rnd-5_family-1081#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AACAAAACAGGAGGCAGGACTTCCAGCTGNGGCAGNNTGAACAGGTCGGC
AAACCCTTTCCCCCAAAACAANTATAAAACTAGACAAAATTGTCAAAAAC
ANCCATTTCGGGACTCCAGAANATGTCCAAAGTCAAACGACAAATTGAGA
GTGTTTATTCANGAAAAACAGCTGAACTTTGGGTAAGAANAGTGGANTCT
GCGGCGNTCTTGCCTGGGGCTGCTCCCTNTTACCCCNCCCTCCCAAGCCC
AGTNNCCGCAGTAGTTTCCGNNNGGCAGGGCAAGCTGNGAAAACCAGCAG
CTTNGCATTTNTNCCAGGGGGCTGACTTGATTTGGAGCGGAGNGCGAAAA
ACCCACGCCCAGTAGCATTGAGTCAAAGTAGCAANCTCGATGGAAACAAA
CGGGGAAGGCCNACAGCTCTGCTAGCCTGAGGTTGCAGTCCCGGTTGGGT
GTGGCAAGATGGACAGCAGANCAGCCAGAAATTTAACGGGGAGATTCTGG
AAATGAGAGAGCCATAGAGGGGCTAGATAAGCTCCCCANACATCCCTGGC
AANTCGNACGCGTACGCAGGGCAGACCAGAGAGGGCCCAAGCTNTCCACA
CATCCCTGGCTGACTGAGAGGCTTTGCGCATGCGAGGAAAAACCTGAGAG
GATTCAGCAGAAAATNAAGGCTGGGTATAGTTGAA
>rnd-5_family-1231#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AGATGAAATGGACANATTCCTTGAAAGACACAAATTACCAAAACTGACTC
AAGAAGAAATAGAAAATCTGAATANCCCTATAGAC
>rnd-5_family-13059#LINE/L2 ( Recon Family Size = 22, Final Multiple Alignment Size = 16 )
GCTCACGCTTCCTTTGCTGGCCCCTACTTGTCTTCAAAANTCAGCGCATT
GTATCCCTCCTCCAGGAAGCCTTCCCTGACCCTTCTCTAGCTGAGCTAGG
CGCTCCTCCTGTCACAGTCCCCTATGCTTNCACTCCTATCATAGCNCTTA
TCACACTGTGTTATAATTGCCTNTTTACNTGTCTGTGTCCCCCGCCANAC
TGTGAGCTTGTTNAGAATAGGGACTGTCTTATCTCGTCTTTGACTCTCTG
GNNCCTGGCNCANNGCCAGATCCAGAGACGGGGNACAGTAAT
>rnd-5_family-1009#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GCCAAAGGCATGACACTCATAACAAGGGCTTCAGGGACTGTGAAACTACC
CCCAGGTGACAAGCCAAGCCAAAAGGTGTACACAGGCACACACACACACA
CACACACACACACACACACACACACACACACACACGATCCTGATTGTGCT
GCTGGCTGGCAGAAAAATATGTCCAAATTTCCCTGGCAGTTGAACCAAGN
AGTGGAGAGGTGATTGCTGAGCTGTTTGGATGAGAGGTTTTGAGCAGCAT
TCCCTGCTTTTGTTCCTGATTGCTGCGAGAATTTT
>rnd-5_family-2880#SINE/MIR ( Recon Family Size = 44, Final Multiple Alignment Size = 16 )
ATATAAAGCACGGGNTTCGGAATCAGAGNTTGAGTTCGAATCCTGNCCCC
GTCACTTCAGCTGTGTGACCTTGGGCGGGTCATTTAACCCTTCNGCGACT
TTCTCTTTCCTNTCANNTGTAAANTAGGAATGAGTTACCAATCTTAGA
>rnd-5_family-3530#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TTTTCAAAATACACCAAAATAGAACCTCCTTAAAGCATAAATCTCACAGG
ACCTATAAAACAACAACAAAAACAAACAATGAAAAAAAAAAACACAAGGT
ATTCAGGCAACAAANAGCACGATGAATAGAATAGTACCTCACATCTCAAT
ACTGACGTTGAATGTAAGTNNCCTA
>rnd-5_family-16750#scRNA ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TGGTCCGATGGTAGTGGGTTATCAGAACTTATTAACATTAGTGTCACTAA
AGTTGGTATACAACCCCCCACTGCTAAATTTGACTGGCTTATA
>rnd-5_family-7711#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ACATTATAAATATACATATGTATATNTGGTTTTNCNTCCACGGTTCCTGG
CTCATCACAGCTTCTATAACCCTTGTNATTTCCTAAGTGACTAGAGCGAT
AGGAGTATCTTCTGTTAAAATATTTGGCCTTTTTGTCCCTGGTTCCTGAA
ATAGGCTCCGGAGCAATAAAGGTGAAAGAGCGGGTCTTTTGTTATTCATA
ACAAGCCCCTTTCAACCACACCTGAGTTTATGTTAATGANGTGACTTTTG
GAAAGCCT
>rnd-5_family-804#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ACATTTTGGCAACGGGGTCTTTTATTTCAGCAGTCTTCAAACTAGGGTAC
GTGAAGNCTTCCCAAGGGGTATGCGAACATGGANAGTTTTAAGGGAATCA
ATTTCCAGATCCTCAACTTCCATATGTTCACTTCCTTNNTTNCTAAAATT
ATGATCTGCCTGAGAATACGCCGCGNTCCAAGTATCCTGTTCTCTCGCGA
CTCCTTTCTCANCCCNCCTTTCAAATCGTCTCTTTTTCTTTACAAAAGAA
AGGCGCACCTCTCACCCATTCTGAATTTTACTATGGTGCATTTGCCCGGG
TGTAAAAACCTCCGGGAGTGCCAAACAGAAGAGNCNATTCCAGGAAATAT
TGTTATCAGCGAAGCCTCTTATTAATTAAGNCAACCATAAACCCACANTA
GGACTTCNTGCATTGCCTTCTCTTAACGTATTTCTGTAAGAATGGCGTTA
GAAATGGGGTATTTCGGCCCGTGTCGGAATGTTCCGAATTCAGATACGTT
GTAGAGTANNGGGCAGCAGGGNAATGACGATTTTGTTTAATGGTATTTTN
CCCTTCTGTCCCCTAACTATGNGTCGAAGAANTAT
>rnd-5_family-3203#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
GCCAGAGGGCTACAGCGGCACAGCGCTGGCTGGACCCAAAGGTGCTGCGG
GGTCCCCAGTACTCTAGCCCACAGGGAGTGCTACTCCCGGGGAAAGGACA
GTGCAGCACACCAAAAAGGCAGCCCTGGGACAAAGGAAACCAAAGCGCGC
GCTTTCCAGAGCCCGAGAGCTCCCTGTCTGGGGCTGTGAGAAGTGACCCC
GCCCCCAGCAGTGGCACAAACTCTGTGCTCGGGCTCACGTGNAGAGCGAG
ATCCCCTCCCCCTCTGCACGCCGCTGTAGCCGCAGCCACTGCTGCTCCGT
CGGAGGCTGGGGCAGGCGAGCCGGAGGGCTGCCTGTCTGGGGCTGTGAGT
GGCGACCGCGNCCCCACTGGCGGCGTGGCCTCTGTGCCCGGGCTCGCGTG
NAGAGGGCGGGGTCCCTCACCCTGAGAGCAAGTGAGCCNGAGAGCTGCCT
GTCTGGGGCTGTGAGTGGCGACCCCGCCCCACTGGCGGCGTGGCCTCTGT
GCTCGGGCTCATGCGCGNAGGGCAGGATCCCTCCCCCTCTGCACGGCGCT
GCGGCGNCGCTGCTGCCGCCAGGAGCAGAGCAGGAGAGCCTGAGAGCTGC
CTGTCTGGGGCTGTGAGTGGTAACCCCGCCCCCACCGANAGCACGGCCTC
TGTGNTCTANTGCNCGCCNTGAGCGCAGGCTCCCCAGGCACA
>rnd-5_family-7639#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
GACTGAACAGTGGACATTGGCTGTGTGAAGGAAACAAAATATNTCACCTC
AAAATATACTTCTTNGACATATTTCGANATGGCTATTCAGAGGGGCTGNA
GACAGGAATAGCCTGAAAAGCTGTCTTTNGTAAAGGAGATTTGCATCTGT
AGAGGAAATAAAGTGAAGTAAACAGCGGATGCAAACAGGCTTTCTCTGAA
GGCC
>rnd-5_family-8564#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AGAAAGTTCACTTGAACACCTGGTTTAAACTACAATCCAGAAAAATCTGT
CAGATTGCCATCTGTAATCTGAAGACTGCCCCAGAGACTCTAGAAAAACT
AGTTTATAGACTACTCCAGACATTAACCTTTTTTTTCTTCTGTTTCCATA
GAAATGCCTCTTATTAAAGATCTGTTTGCCTACATCACATATAGAGGCCT
AGCCCATCTGCAACGCCACCTCCTGGAATGAGACACAACTGTTTAACTGG
ACTGACCTATTCTCAGGACTGAGAGACTGGTTNAANGAGACGTGGGACAA
TATATTTAAATTTNTTTTTTCTACGTTCTTTATCCCAATTTGTTTTTCTC
CACTTTGTCTATCTCTATCTAAAAACCTCTAACCCGAATCTCTCCAAAGC
TATCAACTCGGCTTTTAATATGTGAAACTTNTTATNAAGTTTCAAAGTGG
G
>rnd-5_family-11917#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GCCNACCTCACATCCTCTGGCCAACCTTTTCTACTCCAGCTATTGCTGCG
GCAACCAGNCNCGCGCAGGTGTAACCTGGTAGCANCTCGTCTCAGCTAGC
NCTGCACTAACTCCTCTCCCACTTCTTCCTGCCTTGGGGCTTCTCTGCTG
GGGCCACATAAGTCATTCTGACGCATGCGCAAACCTGGAAGTACAAGGGA
GTTAACACCACGGGGCGCAACCCTTGACCAATGGAGGACGGGANCCAGTG
GATAAATACTCCCTTCTTCTGTCCCTCGGGCAGACGATTCTGAGGCGCAT
TCTGCATGGCTCCTCAGAGGGTCCCACAGGATGGANCNCAGNTGTTCAGG
GTGTGTCCAGCTGCATACCCTTGGATCGGCTTTCTCTCCTTCCCTGTTTC
ACTCTAGTTCCTTATAGGTCCCGCCTCGAAAATAAACTACCTGCACACAA
GCCTTTGTTTCATACTCTGCTTTTGGGGAAATCTACGCTAAGATGTTCNT
CTTGCT
>rnd-5_family-6869#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GCCCATGCCTGACCAGNGGAGAGCTGTAGCGAGGTGGCCCCCACAGGCGT
ACACCAGTTTGCACGTTNCCTCCCCATACTGCAGCTCTTTACATGGAAAC
TCCCTACATCACTTTGCTGGCGCGTGTCTGCACGGGGCACAAGATTTTGC
TTTACTTGCCCCACNAGCACGTGGGAGCGTGCAGCACGCCCCAACCCCTG
CCGACCGCCATTGCAGATGGAGCCTTGGCGGGCACAGAGCCAGCAAGCCC
CGCCCCCGCCAGCGCCCCGCCCTTGCGCTAACGCTGCGCAGAGAACANGG
GATCCTCCCACACCCTGAGCGATCACTCCTGCTTGNGGGCACAGAGAAGG
CACCCAGACCTGCGCCGGCCAGCACCCCGCCCCAAGCCAACACCACCTCC
AGTGCAACAGCACACANAGTGTCCAGCAGAGGGGCCCCCTGNCCCTCCNC
CCCACAGCTGCCTTGCCTCCGCCACTGTGGTGAACGCCCGCAGGGAGGCA
GGCACCCTA
>rnd-5_family-15955#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
TAGAAACTCGATGTTTATTTTCCGTCAACCTTATTTCCATGTTGCTTAAG
AGCCCGCGCAAGAACAGCTTAAGACCATTCAGTGGTTGCTCCTACCCATT
CAGTGGCCTGAGCAGTGGGAGCTGCAGACCAGTCTTCCGTGGCAGGCTGA
GCGCTCCAGTCTTCAGTAGGGAACTGCTGGATAGGCACAGAGGGCACCTG
CATGCCTTCAGACCAGTCTGCAACCTCAGGCTGAGTAGCAGTGAACTCAG
GAGCTGGAGCAGTCCATTCGCCCTGAAATTCCTCCTTGGTCACAGCCTTT
TCAGCAGCAGCCTGCTCTTCTTTTTCAATCTCTTCAGGATCTCTGTAGAA
GTAGAGATCAGGCATGACCTCCCACGGGTGTTCACGGGAAATGGTGCCAC
GCATGCGCAGAACTTCCCGGGCCAGCATCCACCACATCAAACCCACTGAG
TGAGCTCCCTTGTTGTTGCATGGGATGGCAATGTCCACATAGCGCAGAGG
AGAATCTGTGTTACACAGAGCAATGGTAGGTAGGTTAACATAAGATGCCT
CCGTGAGAGGCTGGTGGTCAGCCCTGGGGTCAGTAACCACAAGAAGCCGT
GGCTCCCGGAAGGCTGCCTGGATCTGGTTAGTGAAGGTTCCAGGAGTGAA
GCGGCCAGCAATTGGAGTGGCTCCAGTGGCAGCAGCAAACTTCAGCACGG
CCCTCTGGCCAGTATTCCTGGAGGATATGACACTGACATCAGCAGGGTTT
TCAATGGCAACAATGGCACGAGCTGCCAGCAGAAGCTTCTCCCAGGTCCT
CTTCAGATTTATGATGTAGATGCCATCACTTTTCCTTTTATAGATGTACT
GTTCCATCTGGAAGTCAAGGTTGGTGCCACCTAAGTGGGTTCCTGCTGCA
AGGAACTTAAGGACATCCTCCTCCTTCATTTGCAGGACATCAAGGGCTCC
GGACATTGTGAAAGTTTCCCTTTAAGTTACGACGGGAATCCAGAACAACG
CCGTATGGACCCCTCTGCGGGTAGCGCGGAAA
>rnd-5_family-13210#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 16 )
ACTAANCTCAATGGGAGCTTGTCTGTGCGCACTTTGTGTGAGGAACTGAA
CTGTTGTTTTCATAAGTAAATGAGAGACTGAGTTTCTCAGCTCCGAAGAG
AAAGGGCATTTTGCTCCTCCCAGCCGAAAGGCGCCCCTGGGTGACTGGGG
GCCTCGTGGGAGTGTCTGGGGGGTTGANCCCCCGCAACGTGCAGCGGCCC
TATAGGGAANTCCCCAACAAANATTAATTTNAANAGGCTCGTCCAGGAAA
CGCATATAAGGGCTGATCACCCGGCGTTTTGAGCCCTCTCAGAGGTNATA
GACCTCTGAAGAGAGAAACTGAGACACGTAAGAGGGTAGAAACGACTCAG
TGGTGACACACTGTGGAGTCCTGCCCACAAGCAGCACGTATCGATCCACC
ACACAAAAACCTTAGGCCACGGGTCAGTTCCCTCTTAAGAAAAAAAAAAG
AAGATGGGAAATAAACCCTCCAAGAAAGGAAAGGCAAGGAGAGCGGCCCC
CTACGGACACCTCAGCGGGGTTTACGTTTAATAACTATGGCGCCTTTACT
TGCAAGTATTTATGTAAATAGAAAGACCTTACTAAAGNTGACNTAGGTCT
AAGGTTTCCAAAACGGGGANCTTTCGATATCCCTAAATTGGTTTTCTTGN
ACGCTAGATTAGAAAAGTTAGGCTCCCAAATCGAAGAAAATGAATGAGNA
TTGTACTTTAGCTGGCACCTAGANTCATCAAAAAGAGGAAATGATAAGCT
TGCCTCCTTCCAGGAAAGTTAATAAAAAAATTNTTGAAACTGTCTCAGAA
TTAAAGAAATTAGTAGAAGCCACTTCTGAAATCAGGAAGGCTCCAGAAAC
TGTCTCGCCTTCTGCTCCTCCTGACCCTCTACTCTCNGAACTTCCTTGTC
CGGACGATTCCGTCTTTCCTCCTCCTTCCCCTACTCCCTTNCCTCTAGTC
ANAGGGGAATCAGGAATAGCTGGAGAAAATAATATAGGGCTTGTTCCTTT
TAGAGTAAAACCCACAGGCAGAGGGGATCCTAACGTAATGTATACCCCCT
GGACCAAATCGGAGTTAAAGGCCCTGGTATCTGAATTCCCCAATCCGACT
GAAGATCCCTTTGGATTTGCTAAGGAATTCCAATTAATGCTTAAGACTTA
TGATCCAGGGTTCTCTGACCTATATCGGCTGATTGAGTTNCTGGTCCCCA
AAACAAAGCTGAAGAATGTTTAAAGTAGCAGATTGGAAACAGCCNTTAAA
AGGNTTTTACAAANTAGATGCAACTGGAAGAGAGAAACGCGGAGAGCTTT
GCAGTCGCCTCCGTGAAACTATACCACAGATATTCCCCAAGGTNATAGAC
TGGGCAAAGGTGCAACGACGTAAAGTATGCCCAAACGAAACCATGCCTGA
CTTTTATATCGGGTTTGAAAAGACACTCGAACAGTTTTCAGGAATACCTC
NTGAAAACTTTGAGCATGGTAGAAGTGACACCTTATTAAATTCTGGGTTT
ATTCAAGGTTTAGANAAGGAGTTAGCNACCCTAATGAAGANGAATAATGT
GGCTTGGGCTTCCTTGNCCACTAGCCACCTAGTCACCCTAGCTGANCGAT
TGTCACAAACAATNATTGAGAAAGAAAAAGAAACAGTCTCTAAAATTATA
GTTTATAACTAAAACAACTTAGCAACCAAGTTGGGAGTTTGCAAGGGTCC
CATGGTCCCCAGAGATCNAAGCGACCCCAAGCGGAAGCAATTTGCCACCG
TNGCAGAAAGAAAGGACATTTTGNAAAATGAANGCAAAGAACTTAAATGG
NTGCTNGCACAAAGTGGGCAAAGGGCCCNAGAGGAAGGCACCAGAACAAC
TCAAAAAATCGGAATAGGNATNCTCCGAGGGAANAGAGAGGNTTTCCCCC
CTACTTCTGACTGATNCTTCAGGNGAAGTAGANACATCCACAAATNGGGA
AAACACCGAAGCCCTCGTNAACACTGACGCTGCACTGTCTGTNNTNACCC
CTACCTTGATTAAAAACCCTCTCTCTTGGAGTAAAGAAAAAGTCCAAATG
GTAGGGGTTTCAAACTCCGGTTATAGCCTTCAAANCAAATCCCCTTCCAT
TTCAATCAGGAGANCTANTGGGGCATCATGTTTCTCTTNTAGTAAATGGC
GCCCCCATACACCTGCTGGGATGGGATTTCCTAGGGACCCATAATGCCCN
CATCTCATTTTCACAGAAGGGAGAAATGNTTCTCAACTTGGGANACAGAG
ANGACTTACGAAAGCCCACNTGTANTATTGGTAATATTACGCTTGNGAAA
GTTAATNAAGATTCTGGACAGGAAGAATTAGAGCCTTTCTTATCTAAGGT
ACCGGACTCCTTATGGGCAAGCTCTTCCNCNGATATTGGGAGAATTAAGT
CAGCAGTCCNTACAGAGGTAACCGTAAATNAATCCACCCCCNGCCAAATG
TAAGGCAATGTNCCCTTAGACNTGAAGCNTTACCAGGGATCAAACCAATC
ATTTAGGACTATTTGCGCAAAGGACTCGTAGCACCCCGCACCAGCCCTTG
CAATA
>rnd-5_family-10376#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TTGTGAGGGTTAATTCCAGCAGATCTGGAATTAGCCTGAGCTGTTTTGCT
AAAGTGCCTGCACGGCACTGACCCTTGGTCAAGGCATGAAACATANCGAT
TAATAGTGTCGCTTTGTAACCATGGGTCTGAGGAGTTTCGGGGNNGTTTG
TACCAGCTTGTCGGCATTGTTTATTGATAACAGTGAGATTGATGATTTGC
ACCTGGTCTCGGTGAGACCCCNTGGAGGGCTCTGCCGTTGGGGCTGGTTA
CGTAGCAGGAATATGCCTANGTGACCAGCAGAATGTAAGAAACAAACCCC
GGCTGAGACTCCATTTTGGGCTCCCTGGTTCCGAGGTGTTCCGTGCACAC
ATCGGTGGTTCCTGATCCGAGAGAGAAAAGTGCGNTCCTGNTATGGCCCT
TGNAGGAGGAAGGACAGTTGGAGCTCGCGCCTGGCCTCTCCGGACCCCTT
GCTGTGAGGCAGCCTTTGGCTGTGATGCATATCCTTACTTTAATGCTGTT
GCTATATTGTATCCTTTTCCTGNAATAAACTATAGATTTGTAAGCATTGT
CATTTTGGGTCCTGTGAGTCTTCTTTAGCAACTGAACCCTGTTTAACTGC
CACCGTTAGCA
>rnd-5_family-6638#DNA/TcMar-Tigger ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
GTCCCATCTGAGGCACATTTGAGCTTTTGGAATACAANTATACGTGNTCG
GCCAGAGAGAGAAAGAGGGAAAGGNTGAGACTTTAAAAGTATGGTTAGTN
ACTTCGTCCGCCNGCCNCTCTNTCTCAATAGNATTCCCCAGCNTAAGCGT
TAAANTGGGAGACGTNAATCTACTGTTCCCTCAGTTGGTCCATCATACTT
CTTGTGCGTCTCTCAGTGAATGTGAGCNTCTCGCTGTGCGGGTGTGATTC
TAGTNTTTAAAGATANGTATTTTTATACAACATCTGGCCCTAAATGCAAG
CCAACTACTTCATCTGGTGCTCAACCAAAGAAANAGCGATCTGTTCTAAC
GCTGAAAGAAAAACTGGCTGTGTTGGACTTATTGAGAAATTCTGCACTNC
CGCACAGTCTGTAAATGTTGTATACTGTATTTTAGGGTGACTTAGATTTC
CAAGCGTAATTTGGACTCCAGAGATTTTTGTCTTNTGCGCATAACTCTAT
GAGATGCAACCACTA
>rnd-5_family-6905#LTR/ERVK ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CAACTGAACAACACCTGAATAAACAATCCAAGGAAGAAACTATAAGGCAA
TTGATCTGGTGGCGAGATCCACTCACAAAGAATTGGGAAAGAGGTAATGT
AATAACCTGGGGGAGAGGATTTGCTTGTGTTTCTNCAGGTCCAAATCAAC
AACTGGTGTGGGTACCATCCAGACATTTAAAGCCGTACTATGAGCCAGAC
ACCAAAAANGAGACTTGCAGAGGACCCCCAGTCGCAGAGATGGCGAGACT
AACATCGAGGTGGAGTACTGTTCCCACAAGGAGAACACACCAAACATCAC
CACCGACTTGGGGTCAAATTAAGAAGCTTTCACAAATAGCGGAGGAAAAC
NTGAAGAAAGCAGGACAGCCTATTATGGTAATCATGATGATGGTTATCAC
NATTAAAGTGAGTATTTCTGGAGTTGGGGTAGAAGTAAAAGAAAGTTTCA
CACATTGGGCATATATTCTTTCCTTCCTTTATTGGATATGATCTCTGGCC
TTAGCATTTTCTGTAATAATTTAGGAAATAAAGCAACAATGTTTCGGCCA
TCAAAACCTGAATGCAGATAAAGTAAAGAATGGTCCCCTAAGTTAAAAAC
ATTAACCTTGGGAAGATTGTGTTGTCGCAGAGGCTGAGGTGCTGCACAAC
AATTCCTATGGAATTATTATTGATTATTGGTCCCCTAAGGGGATACTTAG
CATTGATTGCGCCAGTCAGTCCTCTTGTAGTGACATGGAATTCAGATGGC
GGATAAAGAACTACAACTACTTAGAATTTATACATACTGAGATTAACAAC
TCTATTGTCTGGAGAAATGGGGGATTAATAGGACCANGACCAAAAATAGT
ATGGCCAATGTTAAGAGCTGAATAAAAAGAAACTTTGGAAAATACCTATG
GCCCTAAAACCAGTAAAAGTCTGGGAAGGAAAATATAATAGAGAATCAGG
CCCTAATTCTTATTCATTAGAAGTTTACAAGAAATAAAAGCTCTTTAGAT
TCAGAGCTGTGTTAAACCCCCCATATCTTTTGGTGGTGGGAGAGTTACAG
NTTGACTTTATTAACTCTAAAGGTGTAATGAGACTGAACATAATCGGGAG
AGAATAAAACATCACCCGGAAAGGCCTTTAGACAGCAAGCAAGGAGGGGG
GACCCAGAAGACCCTCGACGCCCCTTTTCAGCAGGAAGTAGTTACAGAAG
AATGACCTCTNCCCCATTTCCCAAAAGATTTCTGGGTCCCAGCTCCTTAA
GGAGGAAATGTAAGAGGGGCAGTTAGTCGGGCTTCGAGGTGCTTGAGGGA
GCTGCTGATGGATTGGCAGCCCTAAAATTTGGATGAAAACACTTGGAGGA
TCTATGATTCTGTTGTGATTATGTTATTAATCTGTTTTGTTTCTCTTTGT
GTAGTCTGCAGGTGTAGATCCAGAATCCTCCGAGAAATGGCTCACCANGA
TAGAGCTGTGCTTGCTTACCTAGCTTTGCTGAAACAAAAAAGGGGGAAGA
TGTTGAGAACCAATTA
>rnd-5_family-11362#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TCTTTTCTNCNCCTTTTGCTCCTTTGTGCTTCCGTTTTATGTTGTGCTGT
CTAACAGTGTTGTATGTCGTAAGGAGAANCGCAAGGTAGAGTACAGNCAT
AGCCATAAGCCTATTGTTNGANCTGGCCTTACAGACTAGCGAGTTTGTAA
TNCTCACTNAACCGGCATCCAAGTGGANANACTTTGCGCGGGTCACCAAT
AAAANCGNATGAGGTTCTTTCCATTACTTTTTCGTTTGGTCCTGAGAGCT
TGGCTTTGATCCGGAGAAACCTTTTCTCTCTGATTTTNCGNCTGCCTAAG
GTNCANATTGTCAGGTCTGCATTCAGAGGCGGCCAGCCGTCAGNTTGAGG
GTCTNAGATACGAAGTACATAAGCATTACATTTCGACTGACTNTTGCCAN
CTCTCACGGGTCATCTAAGTCTAAATCCTCTCCTCCTCCAGAANAAAACT
CCTGCTTCTTATATGCNTTCACTCAGTATAATTCTTNCGTTTGTCTCTCT
AAGTGGCGTAACTTCACCAAGGATGATTTGGGCTTAATGACCACTCTCAG
GAACATTTNATTTGAACAAAATNGTTATTTGAGAGACGCCTTAGAAGAGA
AATAANATTTCTCAGGCTCAACGGGCGGCANTTTTTGATTGGTACACAGA
GNNCTCCAAATGAAATTCTGATTNAAAAATTGCTTANTAAGGAATTCTTT
GGCCAAAGCTAACAAGCAATTTGACAAACGTAAGCAANAGAACACATAGA
CTCATTTCCCTGGTAAATCCTCCCCCTCCTCGTCCTCCAGTTGCCTCCCT
GTATCCAGCTCTCCTTCTTCCTNCTNNTCCTTCTGATCTCTTTCCTTCCA
CACCTCATCCCGCTTTCCCTTNTTTGACCTTCACCTTTTTCCAATACCCC
AAGAATGCCCTANTTGCCTCTAAAGATCCATCCCTTCCCTGAGCCAGGTA
TGTAGGCAACTGTAGAATTTAAACCTCGGAAACGNGCTGAATTAAGAGCT
ATATATAATTTAAGAACTTTCCCTAAACCCAGAGAGGACCGAAACAANTA
TTCGTAGAAGAATTTAGANTTCCTNTGGGTGCATATGGCTCAGGGTGACC
TGAACTNTATCAACTTGTACACATGTTGGTCGGAACCTCAGACGCTAAAT
CCTGAATGGCAAAAGCTGATTGGACTGACCCGGAAAGAGACCTATGGGAT
CCCTCTTTCCACAATAAACCTGAGGGTCAAAAAAGGCTCTCNAAAAGTAG
AGCAAAGTCTTCTAAAAGTCATACCCGAAATGTTTTCCAATAAAAACNGA
TTGGANCATAATTCNATCATGCAAACAAANAAAAAATGAAACTATAGAAG
GTT
>rnd-5_family-856#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TTTTCCTTACTAGGCAAAGAACTTTATTAACCTTTGTTTCAAACTTGATT
CCCAGGCTTCTTCGGCTTAATTAGCTGCAAAGAATGAATTGTGTATAAGC
AAAAACCGAAAAGAGCTGCAGTGTCCAAGGGGCTTGGGCTTAAAAATATT
AGAGATCTAGATTTTATCAGATCCATAAACAAAAATTTCTTAAAAAGCAG
TCATAATATAAAATAGCAGCTCCCAGTAACTTCTTCAAGTTTTATCTTCA
GAAGTTGACTCAATTCAGTTTGCCTCATTCTTGGAAGCCTCATCAAAATT
CTCCACAAGATCTGGAACTTCATCATCATCCTCCTCTCCAGTAGCAAGTG
GTGCTTTTCCATCCACAGATTGTTTGGGCAGAGCTTCAGCCAGTCTCCTT
AAACTAGTCAGACTGTCTGCACCAAGCTGGTTTAAGATGCTGGGTAGCAT
TTCTGTCAGCTGCTTTGTCTCAGCATGGCCTGTAATGGTGAAAGTGTTCG
CTGCCAGAGATGCCTGAACTTTAGGGTTGTNAAAGTGGATCACTGTTCCT
TGGTTTGTAAACATATTCACCTCTTCAATACCAGAGATATTGTTTACCCC
TAACTTCTTTAAGGAGAACTGAAGTTTTTTATCATCTGCTGTGGCTGTTC
TATGAACCACCTTCTTTCTGCGAGCAGTTCCTTTCCCACCAATGCGCACT
TGTGCCTGCAGTTTGGCGAGTTTTTCCTGGTTCATGATTGTTTCTTTCAT
CTTGTCGGAGCGGATAAGGGGCCGCGCGGGGGACTAGGGTTGGTGCTCAG
GGGGTCTCGGGTGGACCAGCTGAGCAAACTATTTAAGAGGGCCACAAGCA
AACAGG
>rnd-5_family-1913#Unknown ( Recon Family Size = 21, Final Multiple Alignment Size = 16 )
TATATATAATATGTATGTATATGTATGTGTGTGTATGTATGTATGTATGT
ATGTGTGTGGATATATATATATATANAATGACGCCAGAAAATCAATCCTC
AGAGAAAGGAAAAGGCTAGCTTCTCAGTTTGAGTANAGGACAGNGAGGGA
AAT
>rnd-5_family-3793#LTR/ERV1 ( Recon Family Size = 22, Final Multiple Alignment Size = 16 )
CATAAAGAAAGAGCTAAGGTTCTTTATAATCGTGTTACCTTCTATGTTTA
TTTTTAAAATTGCTTTATTGTCACTTTGATTAAATAGATAANCAAGTATT
GTTTCTCAGGCACCCACGATCCTATCTTAATCATGTCCAAATTTCNCGAG
TCGCTTTTGATTTTGCCTTTCCAAAATCAGATTCCTAAATATAGAAAAAT
AAAATAAAATTTTCGGGATATTTTTTATACCTAAAACTATCTTCGGGATT
TCCCAGAAGGTCNCTAGAAAATCACAAGATTTGTTTCTTTCAACTCGTAA
AAAGCGGAGGGCTATAAATAATTAGGTTTGTTTTAACGAATTGCATGGGA
ACTGTCACANCAGAANANGTGCTTAGCTTTCCTTAGGTTAAATTTGTATN
CGTAAAATATTATTAATAAAGTATTTCGGAAATTGTGTGCTTTATGGGAA
GTCCCTGGAGATTTNTAATGCCCTCGCTTTTCATAATATATTTTAACCTC
AGGGAAACACTGAAAAAACTCTTATGAAAGTTTTTTTGGTTTTCTATATT
TATCAGAGTCCTGGTAGTGCTTTGCCTGATGTTAGNCGACAAAAGTAATA
TGTNNTNNANCNTAATTTCAGTGTTATTTAAAATGTCCTTGCCTTGGCCA
CAGTCTTACTTTTTTAANTNGAATCTAGTATCTCCTAGGCCAGTGGTTCT
CAANTGGGGATGCACATCAGACTTANCTATGGAGTTTTATAAAAATACAA
ATGTCTAGTCGCCACTCATGCNTTACTGGTCTCTTTACTCGATGTCTTTA
TATTNTTGGTATATTCATATTATGTTTNATATTTTATGATATCTATCAGA
ATTATTATGTTNTGTCTCAGTATTTTCTCTATAAAAATTATATTTTTNTA
AATCAGACTTATTATATTCTTTATAGACTTAAGCATTATCTTTGGGACGC
TTTGTCTAAAACTTTTTTGAATGGCTNTATTGATCTCGTTTTGCATACCA
CAGGAAAAACCANATTTCCTTGCCGGTTATTCATTATAATNAACTNTCAT
CAGATCTTTCACNTTTGAAAATTATCAGTNATAAATTAACCACAGNCGCA
TTCCGCCTNCTGTCANCTACAGATAGTTTTTGTTTTACTCTGATGCTTAC
CTGAACGTNCTGCAATCAGCTACAGGCCGGANTTCTTGTCTTCAACNAAG
AANTGTCTCAGAGCCCTGGAGAANCCGCGCCAGAGACTTCAAAGTGTTGA
TACTTCAAAAAATAGATTCTTGGGTACTAGCATTCTGANNTGNCACCGCT
TCGACAACTTTNAAGCTATACGAGTGGGCTGAGTCAAGATTTCCAGGACT
CTTTAGTCGAGAAGCAGATGGNTTCATGAGANCGCTAACCCAAGATCCAG
CGGAACAAGAATTACATAGGACTGAATGAACTGATGAGGGATGATTGTAG
GTCNTTAGAAAAGAACT
>rnd-5_family-3974#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
GTCCTGCCCCTTCAACATGGTCTCTAGAGTGAACACTTGGGTCTAGAAGA
TGGCAGTGGTGGCGGCAGAATTGCACTGAACTTTCTNAATTCCCACATAA
AAACGGNCAGAGCAACAGATAGCAAAACCAAAAACCCGNGNANAACATTT
ACAACAAAACTAAGTGGCAGGGTATCCCCATGAACCCCAAAATGCAAGCN
GNTGGGGACAAACCACCAGCAGCCACAAGGCCGGCATGNTATCGGCATCT
GTGTGGGAGGAAGCAGAGAGGAGCAACAGGGCGTCTGACGGACNTGAGAA
CAGGAGACCCTAAAATAGCCACAGATATTCACTGGAAAGCNCGGCAGGCC
AATTTGAGANCAGCAGCTGAAACTGGATTTTGCTCTAATTCCGGTGAGGC
AAAGGAGCCCGTGGTAAGGTCTGAAGGGCTGGAGCAGTCTGGCCCCTATG
AACTCTCGAAACTGACCAGCCAGAGCTCCCTTCCAGGACAGGGNCCCCCC
AGAAGAGAAACTGCTGGGAGCGGAATCAAAATTGANCAGAANAGAGAAAN
NAGAGACGAAGGAAAGAAGGCAGACGAAAGTGAGGAGAAGCTCAGGAAAT
CTCAGAAAGCAGAAGCCNCTATTTTTGAACACTTTNTGAAAACAACAGAA
AAGGGAGCTCTGGGCATGAAGTTGGAAAAGCTACTCTGAACCACGCTTCC
TTCTAAAAGNTCGGGAAACTAATNTCACNTAAAAACGAGCAACAGAAAAT
ATATTGAGTCAAATCCCATACAAAGTTATTATAAGTNAAAAACGGAATAG
AAAGCAGAATAACATCCCTACAGGAATGAAAGCATACCAGAAAGACATNN
CCTACGAAACAGATNAAAACTNTAACCTANNATTTCAAAATGAGCTAAAA
NACATTAAGAAAAT
>rnd-5_family-17896#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 16 )
TTCATATGTATTAGTCAAATGCAANATTTAAAACTACAAGATACGTATAA
GTACATATCTAGNNTCCGGAGAGANAACGATTTTCTAAACATACAAAAAA
TGGAAGAACATAGATTTTTTGCTTTTTCCAAGATGGCGGATTAGAGGCTT
TTAGCATGCCTCAGCCACTTGGAAATAGCAAGATAGTGCATAAAGATCAA
CTCTGTGAGCTTTAATTCAAGAAGGAAAACGGGAATCTACCGGAATNGCG
AAGGACACCCCAGATCCCAGGGAGGAGAAGGCGGGCAAACAGCCCCCGTG
ACGGCGTCCGGCTGATAAAAGTGAGTGAAGCCCCAGTACGTGAGAGAGGC
AGAGAGCCTCCCTCTGTGACTCACCTTTCCACTGGGGATTCGAGCAACCC
AGGCCGAGGGAGAGCACTTTGTTTCTCCCAAGCCCTGGAGCTAACTTGGG
GAGAGGCTTGGAGACGCTGTGAGGGAAAGACACCAGGAAAAGCTGCAGAC
ATTTTCCCAGACCCGGGACTGAGAGCAGGACGCCATTTTTAATCCGGGCN
CATACAAAGTCAGACATTNTTTGGTGACCCGGCAGNGTGGCCGCGCGGGC
ATTTTAGTCTCGGGCCAGAGATTGGAGCACCTGCTCTGGAGCGGGATAGG
GGTCTCCACAGCCAGAACTGTGGAAAGCGCCTCAGCAGTAGGCGCTGGAA
TTGTGCTCTCCCCCGTTACAAGCCTNGGGCAGNAGGAGAGCTGCTACAGC
TGCGNTTTCTCCTGGGTGGCGAGACTTGCAGCCAGGGCCAGCTTGGCAAC
CTGGAACCGGTCTGCATGTGCCATTGCTGGGTGCCTCAGCCCGCTCTCCT
GAGATCGTGGTGCAGCGGGGCCCTCTCCGCTCCACCTCCAGGCANATCTC
CAGGCATTTGGAGNACCCACTCGCCTAGNTCAGCAGCCTGAGCCACCCCA
CCCTTCCTGNACATAGATCGTGGTGCAGCGGGGCTCTCTCTGCTCCATGC
CCAGGCAGATCTCCAGGCATTCGGAGCACCCGCTCGCCTGGNTCAGNAGC
CTGAGCCACCCCACCCCTCCTGTGCAGAGATCTTGGTGCAAGGGGAGNCC
TCTCCGCTCCATGCCCAGGCAGATCTCCAGGCATCTGGAGCACCCACTCT
CCTGGATTAGGAGTTTAGGCCGCCCCCCATCCCCGTGCAGAGAACTTGGG
GCTGAGGAGGTTTCCCAGCTCCACACCTAGGCACACCNCTGGGCGCTTGG
TGGCCGCTCACTGGATTCTCCCTCGCACAGCGCTGGTGCTTGTGCCTGCC
ATCGGGGGACCTGNAGGCAGACCTGCCNGGTCCGGCCCCTGCCATTCGTG
CATCCGCCCCACCCCTTTCCTGGCCAGGGGCTGAGCAGGGAGCTCAGACC
ACTGTGCATTCCACGAATCAGCCCATTGCCTGAGGCAACAAAGAACTTCT
GCCAGTAAACAAGGATCAAGTATATACCCAGCCACGTTGGCCGCAGCTGG
CTCTTACCTACAAGTGCCATCTACGGGCTTGTAGGTTAAACCACACAGCC
CAATATAAAACCTGCCAAAAGAA
>rnd-5_family-2541#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AAATCAATAGACAGTGCTTAAAAAGGAAATAAATACATAGCAATATAAGT
ATATTATTTAGANATATGGAGGTAAATACCAAAGAAACAGCTAAAGAGTT
GAAAGTGGTTGCCTCCGGGAGTGGACCTGGGATGGGAGAGGTGGAACTGG
GTTGTGTTTTCCCATTATAAATCTTTTGATAGTTTGACTTTTTNAACCAT
GTGCACGTATTNCTTTGATAAAAAT
>rnd-5_family-1785#DNA/hAT-Tip100 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ATAAGTGTTACTTTAAGAATTTTATTAATTTCAGTCGCTACTGCCTCAGC
AGACCNAAGTTTCTCCAAATTGAAATTAATAAAAAANTNCCTAAGAACTA
CAGTGACTCAAGAAAGTTTGTCTAATTTGGCATTACTATCAATAGAACAC
AAATTATGTGAAAATCTTGATTATAACAATATAATTAGTGATTTTGCTGA
AATGAAGGCAAGAAAAATAAATTTTATGGAATAAATATATAATTTATGAA
TTATGTATGTCTTTATTTATTACTCATCCAAACATCGCCAGCCCATCAGC
AGAATANCCAGACATGCGCAATAATAATTAAATTCAGTCGTCTTTGATAT
TTTGCCAACTTTAGTCATTNAAAAACAATAGCTTTAC
>rnd-5_family-293#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AAGGCGGGGCTAATCCCACCNGCANAGACGGACAACCAGGCGAAGAACAA
ACAGCAGCCTGGCTGAGNCCGAGGCAGCCCAGCAGCGCCTCCACAGGCAG
ACAATGGACAGACTGTCTCAAGCGGCACACTGACACCTGCGTTTAAAAAA
AGCCTCATATAG
>rnd-5_family-8872#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CATCCATTTTTAGGCCTGACATAAGTTATTTGAAACCCAGTCGTACCCCG
TCACCTTTGGCCTAGTTAAAACTTCCCCTCCCTNTGTGGTTGTTTGCGAT
ACGGCCCGCTTGTTCCTCATCCCACTGACCCCAAACCCAACACATCCCAC
AGCTGCTGACCATGATAAAACCTAACCGTCAACACCAGAGTCATGTAAAT
AAGTTCCCCCCTTCGCACGTGTTTTCTTTAAACTAGCCAATCCACAACTC
CCGCGGGAAAAGCCTAAGGGATAACGCCCATGGACCTTAATAAAGGTATA
GTCCCACAGGTCTCTCTCCCTCTCTCTTNCTCCCTCTCCACCTGCTGGTT
GAGCTCCCCGCCGCCTCCGGACTTCCCGTCGGCCTCCTCNTCGGCACCCC
TAACCTCTCTGGGACCTGTGAGTAATAAATTTCTTCTGTTTCATGCATTT
TGGTTTTACCTCCTCATTGTGTCTCACCTGACACACACACCCGAACCTAA
CTTTCCCCCCGACTCAGGGCTCTCCTAGAGAGTGGCTATCTTGGCTTATG
GCCACTCTCAACAGAGAGACCTCAAGACCAAATTAGAAAGAAACAATGA
>rnd-5_family-537#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 16 )
GTCGTGGTGCTGTGTCTGTTGTTTCAGCCTGCCCGGCATTCCGCCTCTCT
TCTGCTAGTAACGGCACCTCGGTTTTCCTTTGGGGAACCTCANCCCTTCC
CCACTCTCAGTCCACGTGGTTNGNNNGGATGGGCCTGGGTGATCCCCATC
CCTGGCTCCAGGGGGTGGGCACATGACCCAGGCCTGGCCAATCAGAGTCA
CCGTGGCTTGCGCAGGGACGGGCACGTGACCCGAGCAGGGCCAATGAGAA
TCATCCCCGGACTTTTGCTGGAACTACTGGGAAAGATTGCTGTTTTTCCG
CTGGGATTGCTAAGCCGGTAGAATGCAAGCCTGGAGCTGCTGGTGGNCAT
CTTTCCACCATACGAAGACAGCTTCCTGGAAGAAAGCGGAGCCATGAAAC
GGAGANAGACGCCTTACTGGATCCTTAGAGCACTAGTTCCAGCATTTTC
>rnd-5_family-7584#LINE/CR1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AAACCAAGTCATATGANGACTGGTTAAGGANACAGGGATTTTCCGCCCGG
AGAAGNAAGAATCAGGGACACGATAGCTGTCCTCANATNTCTGAAGGGCT
GTCACGNGGGAGAGGAATCGGGCTTGCTCTGTGTGGCTCCAGATGGNAGA
NCCAGGACTAGGTGGAACGNCCAAGGAGGCAGATTTCAGCTCAATNTNAG
GAAGAACTTTCTAACAATCAGAGCTGTCTGANAATGTGC
>rnd-5_family-602#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
AAATTATACATANTNCAGGNGAGGAGCGTCGTGAAACTCGGCCGCTCATG
AGTTAATCTGGGACAGCCTTTCTGGAAAGCAATTTGGCTAATCAGTATCA
AAGGATCCTTAAAATGTTCACATCTTTGACCCAGTAATTCCACTNCTGGG
AATCTATCCTAAGAANATNACCNGGAATNCAGAAAAAGCTTTCCAAACGT
AAAGATGTTTATCACAGCATTTTTAATAAAATTATGAATAAGCAGTGCTN
AATGTCCAACATTTGGNNAAGTTAACTNAGACATNTAATCTGATAGGACG
TATTCGACAGCCNTTAAAATTACACT
>rnd-5_family-7038#Unknown ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
TTTTTTTTTTACGGCAGCACTTTTATTTTTCCTTACACAATGACGTGTTG
CTGGGGCCTAATGTTCTCACATAACAGCAGAAAACCAAAATTTGTTGTCA
TCTCTTTAAAGAATCGAGAGTTGCGTACAAAAAAAACCTTACATAAATTA
AAAGGATGAATACATTTACAGGTGTAAATGCAAACCGCTTCCAACTCAAG
GCAAGTAACAGCCCACGGTGCTCTGGCAGGAAAAACATCAGCTAAGAAAG
GAAACCGGGTCCTATGGCTCGGACTTTCCCACCCTGACAGACTGGCAGCC
CTTGCCAGCCTCTAGAGCAATCCCAGAACACTCAGCNCTGACACATGAAT
ACCCTGCACAGATAGGAGACTGCTGGCCACGCAGACTCACCAAGCCAGAC
TTGTCTGCCCACAAGCACGTTTTTTTACCTCAGCCACGAAGTGACCAAGC
CACATGTACTAAAGGTTGAAATCAAAGATACGTACAGGGTATTAAACAAA
TAACAAGGGGAACAGTTAACTTGAATACAAGGTCAAAATCAGCAACAAGT
TCTACAATCCAGTGCTGATATCAGATACAAGCTTCAAGGACAATTTCTTT
TCGAAGGCTTATTCCAGTTTCGTGAGGCTAGCATGAGGTGTATGCATTTG
CCAGGGGCAAATTTATACTTCCGAATTAACCCATGCAGCAAATGCTACGC
ATCTGCTCGCAGTCCATTTAGAAGCATTTGCGGTGGACGATGGAGGGGCC
GGACTCGTCGTACTCCTGCTTGCTAATCCACATCTGCTGGAAGGTGGACA
GCGAGGCCAGGATGGAGCCGCCGATCCACACAGAGTACTTGCGCTCNGGG
GGAGCAATGATCTTGATCTTCATGGTGCTGGGTGCCAGGGCGGTGATCTC
CTTCTGCATCCTGTCGGCGATGCCNGGGTACATGGTGGTGCCGCCAGACA
GCACCGTGTTGGCGTACAGGTCTTTGCGGATGTCCACGTCACACTTCATG
ATGGAGTTGAAGGTAGTCTCGTGGATGCCACAAGATTCCATGCCCAGGAA
GGAAGGCTGGAANAGCGCCTCAGGGCAGCGGAACCGCTCGTTGCCGATGG
TGATGACCTGGCCGTCGGGCAGCTCATAGCTCTTCTCCAGGGAGGAGCTG
GAGGCCGCTGTGGCCATCTCCTGCTCGAAGTCCAGGGCGACGTAGCACAG
CTTCTCCTTGATGTCACGCACGATTTCCCGCTCAGCCGTGGTGGTGAAGC
TGTAGCCGCGCTCGGTGAGGATCTTCATGAGGTAGTCAGTCAGGTCCCGG
CCAGCCAGGTCCAGACGCAGGATGGCGTGGGGGAGGGCGTANCCCTCGTA
GATGGGCACNGTGTGGGTGACCCCGTCNCCAGAGTCCATNACAATGCCAG
TGGTGCGGCCAGAGGCGTACAGGGACAGCACGGCCTGGATGGCCACGTAC
ATGGCTGGGGTGTTGAAGGTCTCAAACATGATCTGGGTCATCTTCTCNCG
GTTGGCCTTGGGGTTCAGGGAGGCCTCNGTCAGCAGCACGGGGTGCTCCT
CAGGAGCCACACGCAGCTCGTTGTAGAAAGTGTGGTGCCAGATCTTCTCC
ACGTCGTCCCAGTTGGTGACAATGCCGTGCTCGATGGGGTACTTCAGGGT
CAGGATGCCTCTCTTGCTCTGGGCCTCGTCACCCACGTAGGAGTCCTTCT
GACCCATGCCCACCATCACGCCCTGGTGCCTGGGGCGCCCCACGATGGAG
GGGAAGACGGCCCGGGGAGCATCGTCGCCCGCGAAGCCGGCCTTGCACAT
GCCGGAGCCGTTGTCGACGACGAGTGCGGCGATATCATCATCCATGGTGA
GCTGGCGGCGGGTGTGGACGGGCGGCGGAGCGGCA
>rnd-5_family-7217#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CAGAACACCAATTTGTGAGGATAAATTCCATTTGTCAGGGCAAACACAGA
TCGCAGGTAGCCCTGGAGCTGAGGAATAGCTTTGATTTTTGGTAAAATTT
GTGAGTCCACAGCTTTCTGATCAATCTTGCGCTGCTCTGTAATCTCGTAT
TTCTCTTTTTCTGTGTCGAAGATCTCACCTTCCTGGTGTCTGGGCTTCCG
CAGCTGCTTCTTCTTGAAGTAAGCATCAGTAAGATGTTTTGGGATTTTTA
CATTGCCGATATCAATTTTGGTTGAGGTGGCGATGACAAATTTCCGGTGC
GTTCTTCGCAGAGGAACTCGATTGAGGACCAGAGGTCCAGTCACAAGTAA
CAAGCCACTAGCCAGCTGCTTCAGGAAAACCACCCTCTTGCCCCTGTGGT
GCCCAGTGAGGATGATCAGAATGGTCCCGGGAGTAATGCTGGCTCGCAGT
TTTCTCGCGTGCTGACTNAAGGGTTTTTTGCCGTGGCTCAACAGCTTTCG
AGGCACATCTTCAGTAGGATAATANCTAGGCATTTTGCGAAGTTTAACCA
CCCGGGTACCACCGTTCTTGTCACCACCAACCGGTTTTGTAACAGTTGCA
AGAACCTTCTCCTCTTTTTCTTTTCAACCTTGGATTTAGCCGCTGAGTAC
TTCCTCTTGTACATGGCCTTTCTGGAATACATGGCAGATCGGGAATACCT
GCCAGTTCCTCTGACAAGGACAGGATTTCGGCTGCAATGGGGCTTCCCCT
TCTTGGGCTTTTTAGCCTTGAGGTTACCCTTTTTCACCTTGCCACCAGCA
TCAGCCTTCTTGGCTTCAGGTTTCTTCTCTTTAGTATCCGGCTTCTCAAC
TTTTTCACCCGCCATCTTGCAAGATGGGA
>rnd-5_family-196#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AAGGGCCCTTGGCTAGGAATTACTCCACCAGGATGAGTGAACCTTAAGAA
GNANANATAGANGTAAGNAGNGAGCTGTTAGAGCGATGCCAACCCGAGAC
GGCGGAGTAGGAGATACCAGCCTTCATTCCTCCAAAGAAAAGCAAATACA
GACAGCTATCCGCAAACCAAAATAGCCCTGGGAGGGCTCGAGGGTCCNAT
TAAGAATCTGCAGCAACACAGTGGAGCAAAAACCAGAGAATATCCACATA
GAAAGGATCGCTGGTGAGATCGGCATACNTGAGATGCCNGGAGATGGCTA
GGAACAAAGAAGAAAGGCGGGGGCTATCGGTATCAGCCGCACGGCGGGAG
CCACCGTGGTCCCCAGCGGCCTGCTCCGCAGAGGACACCGGCATCTCTTG
CCACTGAGGTAACCAACAGCCATTNCTACCGGGGAACCCCAGAGAGGGAG
ACGCGGCTGCATACTTTCTCTCAACCCAAGAAGNAGCCGCTGTTGTGCTG
CTTCGGGACCGGAGCCACCACCTCTCCCGANCCCGCGCAATGCCTAANCC
CCGAGCCACGGCCGCCCCGTGAGTGCCCACACTCCAGACCCAGGCTCTGT
GGCTGCACTGNACCTGCCCACGTCTCAGACACCGGAGCCACCGCCATAGC
GAGCTAGCTCGCACCCCGGGNCCCAGAGCCAAGCNCTCNCTGCACGTGCC
CGTGCTCCGGGCACCGGCTCAGCTGCCACAGAGAGCTAAGGCCCCGCCCC
GAACCCCGGAGCCACTNTAACNCTGCATACGCCCGTGCTCCCATCCTCAG
CTCCCCGGCTGCTTCACAAGCGCCCGCGCCTCGCATACCGTTACCAACGC
AGCAGCAGGGGTGCCTGCGCCCCGGGCACCGGTGNCACTACCGCCCCGGA
CCCCAGAGCCGCAGTCCCTCCACGCATGCCCGTGCTTCAGACCTCAGCTC
CATGGCCACTCCGCGGGTGCCACTCATCAGACACTGGTGCCACCGCCACC
GAAACGGAGCCCACAAGCCGGACCCGGTGCCAAGAGGGATCCCCTCAGCC
ACGACTTCCCCAGTGGGAGAAAAAGAGATCGGGAGGACCTTAGCAGCCAT
CGCCAAAGATCCCAACAACCCTCACNACCACTGCGGACATCCACAGCGTT
GGCGACTGAGGATCCCTGCAATCTTCACCAACGCCAACCTCAGCTGACAG
AGCTGCACANAGACTACACAGCTGGCGCCCTCACCGGTGCCAGAACCGCT
GCACNCCACCAGCAAGCGCCTTNATACCTCTCACTCCCATAGAGAAAGNT
TTTCCACAGCGAAACTAGCTGGCAA
>rnd-5_family-2160#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ACTTAGATAAAATGGACAAATTCNTTGAAAAATACAANTTACCAAAACTG
ACACAGAATAAACAGAAAATCTGAATAGTCCTATATCTATTAAAGAAATT
GAATTCATTATTANAAAACCTTTCCACAAAGAAANCTCTAANCCCAAATG
GTTTCACCGGTGAATTNTATCAAACATTCAAGAAAAAATAACGCTAATCT
CTACAAAACTCTTCAGAAAATAGAAGGAAGGAAAGTACTCCTGGCAATTT
ATTTTATNAAACCCAGCAAATAANTTNNATAA
>rnd-5_family-3965#DNA/hAT-Charlie ( Recon Family Size = 20, Final Multiple Alignment Size = 16 )
ACTCATGACTCCGTTACTCGGTTTATCACTCAGCTGAACACCACTGGCTG
CCATAGGGATGNTTGAGATCATCGCAGTTTTAAATCGTTTTTATTCTTAG
TCGTATATGTTTAATTTATGCCCATAATGCTGTNTTTAAAAAGANAGAAA
CATAAGGAACACTGATGCTGAAATACAAGTTAATGAGGAGCATAAAACGA
TAATTCTGCAAATTTNCCTCAAGATGATCTTCACCAGATCCGTAAATTGC
ATTCATCTGATCAAAATNCTCATATATAGACTATCAAGATGTCTCTAATA
TTTCAAAAACAATGTTAAAAAGAGAAAAATANANTGACGATTATANCCAG
TTTGGCTTTTCATTTATTGAGAATAAAGACTTACCNACGCCCGCAATGTG
TTATTTGCGGAGAAGTGCTTGCAAATAGCAGCCTGAAACCTTCTTTTTCT
TCCNTGTCATTTAGAAACAAAACATAGAAATTATANAAATAAACNCAGTT
GNTTTTTAAAGCGNAAAATNCAAGAATTCCAAACACTGGAGGGTTTTGAT
TCGGCAGTTTTTATNNANGACAGTTTTTTGCCTGTTTTTGGGCGCCGTAA
CGTATAGTTAAATTCAATCTACATTTTANTATGTATTCGGTCCCCAAACC
AGATATGATATAACATTTTAATTTATTTGCCAGCAAATCATGTATTTTTA
TATTTATTTAAANTAAATTTAACTGTGTGCGTCATATTTGTTAAATGAAC
AAAAC
>rnd-5_family-5152#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
TCAGCATCATCTTTGGNGCTGAGGNAGTTGGGGGCAATACGGGTGTCCAT
CACTGGGAGAGTGNAGGGTAAATGTGCACATCGTGCAGCGNCGCAGTTAG
AAGCAATGGNCTAGATGTACACGCAGCAACATGGATAGATCTTAAAATAT
GGANGAAAATAAGANCTAAATGTATTGAATATGACGCAGTATNATTTACG
TAAATNTAATGCACACAAAAATACGCATTTTACAAGAACACATACAAACA
AAAAGATACATATTNAATACATTAGAATGATTGCCTGTGGGGAGANGGAA
TGGGAATGAGGAATGGGAATAAAANGGAAAAAAATTAAAAAATAAAGCCN
TGCTGTGGCCAGTGATGACAATGTGCCATGAACTGAATGATTAACTCAGT
TCTCTGCACCTGANGCCCANAAGGGAAAAAGAATTCTGATATAAAGGGTA
TNTNTTGAGACAATTGTTGCCTCTCACTNCAANTTCAGTTACAGNTCTTT
CTTTCNCT
>rnd-5_family-6051#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
CATAATGCTAGGCAGGACTGGAGTGATGTCAGCAAGATGGCGGAATAGGA
GGTCCCAGGCTCTACTGCCCCCNACAGAAAGTTCAACTAGCAACTATCCA
CAGACGAGAACATCTNTTTGAAAACCCCAAACTTGGGAAAAGCCCGAGAC
ANCCGCGTGGTCCACAGAACTGAATGAAAACGNANTTAGAAGGGTAAGAG
GAATGGTCTCACTTTGACCCCTGCGTCGCCCTCACAATTTCCCCCAAGTC
GGCACAGTGCCANANAGAGAATTTCCCTGGGCCCACGGTTTCTACAGNGG
GAAAAGAGAACTGGAGGCGGNCATNCAGCTTCCCTAGCATTCTGAGATGC
TTCCCAGGAAGCCCACTCCGGTCTCACTTCACAGGGAACGCTGGNGGAAA
CGGCACGGCTAGGCCGCCTGGGGTCAGGTAGAAACAAAGNAAAGAGGCAG
AGCTCACAGCGACCAGCGCGCGGATCTTGGTGGTAGCTCTGTGTNCCTGC
CAGCGGTGGCGCCCGATCAGAGGTACCAGCCAACAGCATAGCCCACCCGC
AAAGCCGAGCTGGTCGCTTCCAGAAGCACGATGGGAAGCTCNACCTGGCT
TGAATTCCTAGATAGCCAGTCTCCANGCCCAGCTCAGANCCCGCCCCGAG
CCTACCCAGGGAGGGAGACGGCCACCCCGCAGCGCATTTCGNAGAGTTAA
GCAGAAGGGCTAGACTTTCTCATAACCCGGGAGTTTAAACAGTGACTCTG
NTCAGCCTCAAAGCCCACCCCGATGACCTCACCCAGGGAGGGAGATGCNT
ACCNCTAATGCATTTTTGACAAGAATCGAGGAGCTAGATCTGCTCGACCC
GGGAGGTCGAGCGGCGACTCCGCTCAGCCTAAAGCCCACCCCGCGGCTCC
ACCCAGACAGGGAGGCAANCCTCAAATACGCATTTCTACCGAACATAGNC
NCTNCTTTTGNTTGTCAAGCAGTACTCCGCCTAACCTCGNGGCCCAGCCT
GCAACCCTGNCTAGCTGTAGAACTCGAANAGCGGTATCACCCGGCCAGGG
AATATACTCTGTGGCTAGCCTAATCAGAGGCGATCGCAGTGCCCAGCTAG
CANCTCGGCCTGATTGCGGAGCTCAGTCAGTTATCTCGCCGGACAGCGGA
ACAGTCAGCAGTCCCATCCAACTCAGAGCAAAGACAGCGGCCCAGNCATC
TAGAGAATACAGCAANCTGTCCCTGCCCGGGGTTGTTACCAGCTGGCCCA
TNCAGAATCATAGGCTAGANTAGTTAGTGAAGGTCTATCCTGCCAAAGAA
TACCTGTAAAAGATGAAAAAGTAGCTATTCCTCAAATGCGCAGACGNCAG
CGAAAGAATACAAGGNTTACGAAGAATCGGGAACTCATACCTTCGAAANG
AAACTAACGAAGTTCCAATAATGAATCTAAAGAAAGGGAGATCTACGAAG
TGGCTGGACAAAAAATTCAGANTAATNATCTTTAANAAACTCAGTGGGCT
ANAAGAGNACACAGTTCAAATATTAAATGCAA
>rnd-5_family-419#Unknown ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
GCAGTCCCGCGGATCTGTCTCTTGCTTCAACAGTGTTTGGACGGAACAGA
TCCCGGGAACTCTTTCTTCCAGCCTCCGACCGCCCTCCGATTTCCTCTCC
ACTTGCAACCTCTGGGACCATCTTCTCGGCCATCTCCTGCTTCTGGGGAC
CNGCTAACACCGTTTTTGTGGTTAGCTCCTTTTTGCCGACCAACCATGAG
CTCCCAGATTCGTCAGAATTATTCCACCGACGTGGAGGCAGCCGTCAACC
GCCTGGTCAATGTGTACCTGCAGGCCTCCTACACCTACCTCTCTCTGGGC
TACTATTTCGACCGCGATGATGTGGCTCTGGAAGGCGTGAGCCACTTCTT
CCGCGAATTGGCCGAGGAGAAGCGCGAGGGCTACGAGCGTCTCCTGAAGA
TGCAAAACCAGCGTGGCGGCCGCGCTCTCTTCCAGGACATCAAGAAGCCG
GCTCAAGATGAGTGGGGTAAAACCCTGGATGCCATGGAAGCCGCCATGGC
CCTGGAGAAAAATCTGAACCAGGCCCTTTTGGATCTTCATGCCCTGGGTT
CTGCCCGCACGGACCCCCATCTCTGTGACTTCCTGGAGAGTCACTTCCTA
GATGAGGAAGTGAAAATCATCAAGAAGATGGGTGACCACCTGACCAANCT
CCGCAGGCTGGCCGGCCCAGAGGCTGGGCTGGGTGAGTATCTCTTCGAAA
GGCTCACTCTCAAGCACGNCTAGGAGCCTACTGAGCCCAGTGACTTCTGA
AGGGGCCCTTNCAAAGTAGCAGGGCTTCTGCCTAAGCCTCTCCCTCCAGC
CACTAGGCAGCTTTCTAACTACCCTNAGAAGCTCTCAATCCTTGGACCAA
ATGGAAATAAAGCTTTTTGAAGCAAAGAAAANAAA
>rnd-5_family-11390#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
TAAAATTTCAGTTATGCAAGATGAATAAGTTCTAGAGATCTGCTGTACAA
CATNGTGCCTATAGTTAACAATANNGCATTNTGCACTTAAAAATNTGTTA
AGAGGGTAGATCT
>rnd-5_family-11177#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 15 )
GAGGGAGAAGAAAAGGAAAAATCAGTTAGGTAAACATGTAAAATCTTTTA
ANNGNNANTCNCGNAGAAGCGGCCTGAAAAATCACAGCTACAGGCANAAA
TAGAGCAGCCTGGGGAAAAATCAGGCTGCANCTGCACAGATAAGGAAGCA
AGGTCCAGCACAGAAGCCCTTTGTTCTTTGTGTGATTAGCGGGCTCCCAG
GAAAAAGTTTCCTCCCCTTTTCAGGCATGTACACGGTGGGCTCCATGGGA
ACTTGCACAGGGAGGAGGGGGCTTGCCTAAGACANACCCACAGTTACACA
AACAAGAGAAGCTGCGCTTTGTGCTTGCCCGAGACATACCCACAGCTGCA
CAGATAAGGGGAGTTACGCAGACAGCTTTACAGATAAGAGAAGTTACTCA
AACAGC
>rnd-5_family-8719#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TGGTCTGAACTGGGGGAAAGAAAAACTNTTCGGAAGCTGGCAANTGAAGA
ANNTTATCCGAAAGCTANAANNTCCGCTTCTGTCTGTNTGTATGCGTCTA
TATGTCTATATGTGTTATNTGTACGTGATATTTCTATGTAATCTGAGACA
ATATTTGGTAAATGNAGCTAGTTTTNAAATTGTTGGTAAAATAAAACAGA
AACGTCTTCAGAATTGTCAGTATAATATAATTCAGATATTTTTACCTGGA
TCTACTGGTCAGACAGGTTTAGTGCTGTCTTTGCTACTGTTTTAAGGTCA
TAAAACTGTTGCTTCTGTGATATTTTTGATACTTGCTTGATTTGTCTGTG
AGCTAAAGCTGTGAGGGCTGGCCGCTGGGCTTCCCTGAAGCCTTGCGCAC
ATCTTGCTGTGAGCTTATGTCTTTGGTTTTGAGCCTTTGGATTCTGAGGT
CTGGACAGGTGGCCATGGTGAGGTGTGTCCGCGGCACCTGGGCCACCAGN
CGCCATCTTCACAGCTCTGTCCTCTGTCCTGAGCTCTACACCTGGTGCGT
AAATTCAGGACCCAGATGGGCCCTGCCCTTCATAGCCGTCCTGNGTGCCA
TATGGGTACTCGGGACCCAGGACGACTGGGGAAGACATTAGGGAGGGTAC
CTGT
>rnd-5_family-1611#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CAGATGTCGAACAGTGATGAAGTCACNGGCCCCAAATGGAGCATAGAGGA
TGCTTGCGGAAAATGCAGTGGGACGTTTGGAANATTTAGCAAGTGTCCAT
GTCGGCTGGNAAATACAAAATTATTTTTCAAGAAGAAAATGTTGCTACTG
AGAAATATGCCCACGACCAGATTGTAAGTTATGCCATCTTTTGACTGACA
TCGTCAATCAGGCCTCAGTTGGTCAGAAACTCCACTGACTGGTCGCTAGA
GTCCATGACAACTGAGGTCTGATTCACAATGGCAGTCAAAAATGATATTC
ACTTGATATTCCAGAGGCCCCAGAAGTAAAAATTTCTCTTCGAGACAAAG
AAATGCATCTTACCACGTCAGGGGGCATCTCATCGTNTTCAATGTCTTCG
ACGATGANGTCCTGTAGGACCTCANCAGGACCTAAGAGAACACAGAGTGA
CAGTCAGTGCATTGGTGCTGCTGAGGAATCTCACAAGGAGCTTTGGGAAA
TGTGGACCGGGCTGGAGTGTATGGAGCTGGGCGTTTGACAAGCATGGACT
GAGCTGCTGCTGGACCATTCTCCTTGGTGCTGAAGGAAGGAAAAGGAGAG
GGGCAGAAAGAAATGAAAGAGCCTTGGCTTCCTAGCTAGGGCAACCTCAT
CAATGTGAAATCGTCATTTGAAGAACCGGTTAATACAGAAAGG
>rnd-5_family-54#SINE/MIR ( Recon Family Size = 24, Final Multiple Alignment Size = 15 )
AAGCACAGGATCTAGAGTCAGATCGACGGGTTTGAATCCTGGCTCTGCCN
TTTCTANCTCTGTGACTTTAGGCAAATTACGTATTCTCTCAGANACTCAA
GTCCTCCTCTATAAAATGAGGATAGGGAAACAATCA
>rnd-5_family-6345#LTR/ERVK ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GGGGGATCGGTCAGAGTGGTGGGAAAAACTATAGGGAAAGGACGCAAACC
TTTTGAAAGGTCGGAAGGTTTTGCAGAGCCCCGGGGGAGAATAGCTGAAG
GCAGCTGTTCTATAACCCTGAGGCAGAGGGCAAGGAGTAGGTACAAGGGA
GTGTAGGGGAATTTATCTTAAACAGGCTTGTTTACTTATGTTGACCAGGA
ACTGACCTTTGATCATCCGCGCACATGACGTTCCCTGAAA
>rnd-5_family-721#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
AAAAGAATTCACAAAAANCTNCTGGAACTAATAAGTGANTNTAGCAAGGT
CGCAGGANACAAGGTTAATATACAAAAGTNAATTNCTTTCCTATATACTA
GCAATGAACAATTGAAATTTAATAATTTAAAAAAATACCATTTAAACAGC
GCCCCAAAAAGTGCAAATATTTGTGTAAAATAGTAGNTGCAAATCCAACA
GNATGGTTATGCGATANATGGACATGTAAAAANCTCCAANAAGTTAAATG
GATA
>rnd-5_family-10992#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TAGATTTGAAAACTTAGATGANATGGGTAANTTTCTGGAAAAACATAGGT
TATANTATTTAAGGAATAAAATAATGNCCTTTAAAGACTAAGGAACGAAT
CAGTAGTTAAAAATCTTTCCATAAAGAAAATAATGNCTGTGATGACTTTA
CAGGCGAGTTCTACCAAGCTTTCAAGGAACAGATAATTCCAATCTTACAC
AAACTNTTCCAGAGAATAGAAAAAAGGAAAGANCNTCCACAACTCATTTT
NTGAGGCTGGCATAACCTTGATACCAAAACCAGACAAGGACAG
>rnd-5_family-4291#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
TCAAAGCAGCTGTTAGCTTGCTACTGGGTTCTTGTCGAAACTGAACGCCT
GACCCATAGAGGCCTTGTGACTCTCTGGCNTGATATTNTCAGCTCANTTT
GAAGTTGGATCAACTCGGATTCAATNACTAACAAAGGAAATAGAATATTC
NAGAATGCATCCAGCTCGGCCTCAGCAGCATCTCGGTTATNACATGAAAA
AGTGGCANCTGTCTCTTTGGGGAAACTTTATCNTCCTACTCCGCCGCCTG
AAGCAAAGCCGCTGGCTCAACGGGGCCCTCGGTTAACAGAGATTTCCCTA
AATGCCTAGCCTGGTTCACTGATGGTTTGGCTAANCTGAAACCCGACGGT
GTCCGCGGGNNCTNTGGATGCTTGGTCCTCAGNACCGGCTACGCAGAACC
GAAAATTGGTGTGGTCGCTTTCAGTGGGCGAAACTCGAGGTCGTTTCTCA
NAGCTNCGCAATACTCTTCTTNATGAAACTTGTTATNTTTTTACTGACTC
TTGGACCGTTGCTAACGGCCTAGCTGTTTGGTCTGCCACTCGGAAAACTA
CAGACTGGCAGATTAAAGACACCTCTTTGGGGCCACGAACTGTGGGAACA
GATCGCGGCCGCTGATCGAACTATCTGGGTNACTTATGTAGATNCACCNT
GGCTAAAGGCNCATTCTCTGATGAGACCGNCTGGAANCGAGCTGCTGATC
GAGCCTACGTACTCAGATTGCCACAATTTGCTGCCTGGATCTATCATCGT
ACAGGCATGGAAATGGCCGTACANCNCCCACACAGACCACAGACAGGCCA
CACAACCAAGGACTCGGTGGTCCTGATGCAGACTCGGGGCTGCATGCCAG
ACTGTGGCTCCTAGACTTGACCTCTTCATCTGTCAGTGAGGGAGGCCANA
TCACATAGNNTNCGGTCCCGCNTNTTCCTGGAAGANTGACTGCGTCGGAC
TTTTGACCCCTTCCTGGAGCTATAAGTGGTGCCTCACTACTGTTGACACC
TTTTCAGGTTACGGTGTTGCTGTTCNANTCCGATCAGCTAACTCCGGCCA
CACCATTNTGNCCCTTGAAACTAATCCGTGTCATGCTTTCAGCNTTCGAG
GCCATTTTCAACCAGACAGTGGAACCCTTTTCACTGCAAAAGCCACTNAA
NAGTGGGCTGANAGTCAAGGTTTTTNATGATNCTATCATCCACCAGNCGT
CCGAAATCGCTGAGCATGGACGACCTCCTAAAAAATCAACTCAAAAAGAT
TTCTGATTCNATCTCCCTCACCTCTTCCTGGTTCATATACCTNAGTAAGG
CAGTTTGGTCACTAAATGCGGCTGTCTCCCGAAAGAGATTANCTCCTCTC
AGCCGTTTCCTGGATAATGATCAAGATAAAAGGGGTGGGGAGNAATTAGA
GACTTATTTTGAAAATTCGGAATTCCATCCTGACCATTCCTGGGNATGAT
GCATCTTTCTTCTCCTCA
>rnd-5_family-3861#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGAGAAAACATTTTAAATGGTCCATTTTCAAGGCATGATAAATCTAAGTA
CTGGCAGCCAGCCTGCGGATGTAACAAACCGCACGGCTCATGCACCTAGA
AGGTCACGATAAGCGAACAGAATGTAGAGGAGGGGTCAGCCCATAAAAGG
GAAGAAAGTTTCGTTATTGGGAAATCGAAACTTAAGCGGGGAAGGGGACC
AGGGTATAACCTTGTAAGGGGGATAATGAAACTTAGGCGACGTCCGGGAA
GATTGTAACCCCATAGTACTCGACCAATGAGGAACTGGGGGAGGGACTTG
CGTGCTAGGAGATAAATTACCTGCTGTAACTGCCCCGGGTGTGCCTGCCT
ACCAGACACCCGATCTTGCAAGACCGCCATTAAAAGTCTCGCTTCCGCTG
TTCTTCGTGTCTCTGAGTCCATTCTTTGGGTTTGGACGGGTGAGTGTGTT
TCTCA
>rnd-5_family-1797#LINE/L2 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CTGNTACCTGTCTCCGCTTGGATGCCTAATAGGCATCTCAAACTTAACAC
GTTCAAAACTAACTGAATTCATCATCTCTCCTCGAAACTTGTTCTTCCTC
CAGTGTTTCCTATCTTAGTAAATGACACCACCATCCNTCCAGCCGCNCAN
GCCAGAAACTATGGAGTTAT
>rnd-5_family-1681#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TTGTCGAGGGCTAATGAGAANAGAACAGAGGCGGACTTAATACATAAATG
ATGNCTTAGTGCCAAGTGAAGGCCAAATGNGTCCACTGAGGGCCGTAAAA
ACAGCTTAGCAGTAGATCCGATGGAGAAAAAAGTGGTGAAGAGTGATCGT
TGCNTGGCNCACGGTAATACGGCACGNCGAACCCAAANGAACCCCGCGTT
GGCAGTCGGCACCATAGTCACGATTTGAACGGAAGATTCGATTTCAGCAA
AACAACATCATCTGCCNCATTAANTATTTAAGTTGTTNATTTGAATNTTA
TTGATTTTGCGGTTTTGTTTATATTTAATTTGTAAATNTGTTTTGGTTTT
TATAGTCGTATAAAAGCCGTAAGCATAAGGAGTTTATATCTAGTTTTATG
TTTGTACATATTTAAGTAACGCTATAATAAAAATAAGT
>rnd-5_family-6323#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GAGAGGAGAAAGGAAGAAACCAGTCAGGCAGGCAGTTAGGGTGGGTCCTC
GGTTGAATTCTTTCAAACCAAAGAACAGCTACGCAGGCANAGATAAGGAA
CGNGCACAGGGGGCTTGCCTAAGACATGCCCACGGCCGCACAGATAAGAA
AGGCTGCACAGGGGGCTTGCCTAAACATGCCCGCGGTGAAAAATTCCGTC
CCCTAACACATGCGCAGTAAGGGAAATAAATCAATGTGGAGTAACTCAAG
CT
>rnd-5_family-4383#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TAGCCCAAACTGGGCCTACTCTGTTGATAACAAAATGTCGAGTTACCTTG
TAGGTATAACAGAGCCAAAAACTGCAAGTCATGTAGCCCGGGCATGCGCA
ATAGAAAAAGCTTTGACCTCTAACAACACCCAGAACCAACGATTCCTCCC
CTCGGAACCAAGAAGACCGGGACATGACCGGAACCTGAACGCCGGAACTC
TTTCAGAAGCGAGGGGTCCATTGGCCCGGAAGATCCGGGGCTAAAATCCG
CCTCAACATACCTTACCATAAATGGTCAAATTTGAAGCCCTCCAATCAGA
CCCTGCCAAGCCAACATTCCTAAATCCTTTCCCTTGCCCTCTGANCCCTT
AAACTTGCCCCAGACCCCAAATCAGGGAGACAGATTTGAGCCCGCCTGGC
TCCTCCTTGCTGGCCGGTTTTGCAATAAAGCCTTTCTTTTCTCAAAAGCC
GGTGCCAATAGTTATTGGCTTCTGTGCACATTGGGCAGCGAGCCCGTTTG
CTTGATAACAAAGCA
>rnd-5_family-11064#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGTTGGCAGCTGTCAGGAGTGTGAGCAGTGGAGGGGAAATAAAAGGGAAC
AGCTCTGAATCTGCCCCAGCAGCCGCTGCAAGATCTCGGTGCCGGCATGG
CGACANCGAAGCGCCCTGCACGCCAGGAAGNCCCCCTCTATGTGCTGCTG
AGCCGGTCCTGGACCCGACGATCCCGCCCTCGGTCTTCGGAGCAGAAATC
GNAAAAACGGAAGGACCGGGAATGGCAGACCATATGANGGCCATGAACCA
CGGGCACTTCCCCGACGGCACCAACGGNCTGCACCACCACCCTGCCCACC
GCATGGGCATGGGGCAGTTCCCAGGCCCCCATCACCAGCAGCAGCAGCGG
CCCCAGCGCGCCTTCAANGCCCTGATGGGCGAGCACATACACTACGGCGN
GGGCAACATGAATGCCACGAGCAGCATCAGGCACGCCATGGGGCCAGGGA
CTGTGAACGGAGGGCACCCCCCGAGCGCACTGGCCNCCGCGGCCAGGTTT
ANCAACTCCCAGTTCATGCCNCGCCCCCGGTGGCCAGNCAGGGAGGCTCC
CTGCCGGCCAGCATGCANCTGCAGAGGCCCAACGGCCAGTGTTTCAACCA
TCACCCCGGNACCTCCGCAGCCACTGCATGCCGGATTTGCACCCTGCTGC
AGGCCACCAGNTGAANGGGNCAAACCAGCACTCCCGAGATTGCAACCNCA
AGTATGAGCACGGCGGCGGCAGCAGCGCCCCCGGCGGCTCGGGCGGCGGC
TCGGGCGGCGGCTCGGGCGGCAGCAGCACCCGGCGGCTCGGGCGGCGGCT
CAGGCGGCAGCAGCACCCCGGCGGCTCGGGCGGCAGCAGCACCCCCGGCG
GCTCGGGCGGCGGCTCGGGCAGCGGCAGCGGCGTCCCGGCGGCTCGGGCG
GCGGCGGGCGGCGACTCGGGCGGCGGCAGGCGGCAGCAGCACCCCGGCGG
CTCAGGGCGGCTCGGCGGCGGCTNAGGCGGCAGCAGCACCCCGGCGGCTC
GGGCGGCGGCAACAGCGGCGGCAGCAGCACCCCGGCGGCTCAGGCGGCGG
CTCGGGCGGCAGCAGCGCCCCGGCGGCTCGGGCGGCGGCTCAGGCGGCAG
CACGGCGGGGCAGCAGCACCCCGGCGGCTCAGGCGGCGGCTCAGGCGGCA
GCAGCACCCCGGCGGCTCGGGCGGCAGCAGCGCCNCGGCGGCTCGGGCGG
CGGCTCGGGCGGCAGCAGCACCCCGGCGGCTCAGGCGGCGGCTCGGGCGG
CGGCATCAGGGCGGCAGCAGCACCCTGGCGGCTCAGGCGGCGGCTGGGGC
GGCGGCTGGGTGGCAGCAGCACCCCGGCGGCTCGGGCGGCGGCNCGGGCG
GCAGCAGCAGGCGGCGGCATGGGCAGCAGNAACAGAGGCCGCGGCGGCTC
GGGCGGTGGCNCGGGCGGCNGCAACACCGGGCGGCAGCAGCGCCCAGGCG
GCTCGGNCAGCAGTAACAGCGGCGGCGGCAGCTGCAGCAGCAACATGCCC
GCCTCCGTGGCCCACGTCCCTGCTGCAATGCTGCGGCCCAATGTCATAGA
CACTGATTTCACCAACGAGGAAGTTCCTATGTCCTTGGTGATAGAAAANG
GTTTGGACTGCATCAAGGAGTTGCCCGAACTCTGGCTGGGGCAAAACGAG
TTTGATTTTGTGAAGGACTTCGTGTGCAAACAGCAGCCCAGCAGAG
>rnd-5_family-6887#LTR/ERVK ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GAGAGCCAGAGTAGCCCACCCCCTCTGGGGGGATCAGCAGCAAGGCTGCT
GTGAACTTTGGGTGAACTCCAGAGAAGTGAAACCATAATAGGGGAATGTG
TATGTCTCGGAGAAGAGCAGACGGACCTAGCGAAAGATAACCAGCTTTCA
CTGACCTTGCTGCAAGATAGTTGTTAGCTGAAGTATGTTAACTGAAGTAT
GAGAATNATAACCACAGGCTGTTCTGGGTAACTGCACCCTCCCTCTGCTA
TGTGCTTTGTGAACATATAAAATAAAGTACTCTGAGACAGGTCGGGGCCG
GAGAGACTGACACCTTCACTCTCCCGGACCGCCTGGCCCAGCTTTCTCTA
TGTCTGTCTTTGTGTCTTTCTTTATCCCCCACCGTTCCCTCTTAGGTCTT
TGAACCCTTGTGCAGCGCGGGACGCAGCACACGCC
>rnd-5_family-11764#Unknown ( Recon Family Size = 23, Final Multiple Alignment Size = 15 )
ATCGAGCCTCAGTGGGGAACAGACTCTCACTCAGAATTCTCCCCACCAAG
GACACTGTATAAGTCACCTATGATACATANGGTCAGATTATCTTACTTNA
ATTCAAAAAGATAAAGTTAAGAAAGTAACCTTTTCTCAGACAAAACCAGG
TGGCCTGACCTTCACNTGCCGTGGGTCNTCCTCATCTGAGGTTCGTTGGT
GAAGCCTTTNCNGGAGGTGTATTCCGTGGGAACTAGGAGGACACAGAGTG
ACCGTCAGCAGGTGCAGGAGAGGAGCAGGGAAGAAAGGCTTTCTAGCCCN
GGCCGCCTCATCAACGTGAAATAGCCCATCTCGAACAGGGCACANCACCC
AGGGCAGGCTGTGTGTCCCTGCAGCCTCTCAGGNCTCCTGCCTCCTAATC
TGACCTGAGCTCACTTGCCCTCCCTTCCTNAGTCCTTCCAAGGTCATTTC
CTCCCTAGAATCCACCTGTGCTGCTGCTGTGTGCATCAGTCATTCTACAA
TATGTTATACTTGGTAAAAAGCAACCTTTCTTCAGAGAGAACATTTAATT
CTAGCCAAAATATTCTATTGCATTTATTCACTAANCTTTTGTTTTAAAGA
CAATAAAACAAAATTTTGAAAATACTCGATTATCCTNTCATTTAAAGATA
ACCCCTATTTAGCANGTGCTATCTGTCCTTNCACTCNACCTTCTCAACGC
AACGTCTGCGTGTGTCGCGGGGAGTCCGTTGCTGCTCACGCTCACACTGG
CTCCGACACCGGGACAGCCCGTCATGGGGGCAGCAGGTGGGGGCACTGAC
CCTCTCCAACCCAGCTGTGCAGGAGGTTCCCGCAGGGGAGATGGGCGGGA
GGCCAACACCCAAGTTGTTCCTTGAGATCATATTCGGCGCTGNGTCTTNA
NTGTGTTTACTNCTNAACTAAAG
>rnd-5_family-8887#DNA/hAT-Tip100 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
AAGGAATATGGTTCTGTCCTAGACAGAGGTGGATTTATATGGGAAGCTAA
TGAAGCTTAAGCTTCAGGGCCCGCCACTGCAACGGGCCCCTTCCAAGGCG
GGTCCGTANCTAATTTTGTATTTATAATTTTGTATTCTTTTTCTTAAAGA
AGGCNCCCCAAAATTGTATAAGCTTCAGGCCCCACGAAACCTGGATCCGC
CCCTGNTCCTGACACTNCCTAGCCTGCNAACTC
>rnd-5_family-1214#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TAAAACAGTGCTNCTCAAAGTGCTAGTGTCCTCGAACTGTTTCAGTATGA
TGAGATAAGGAGCTTGTGCCAGAATGTAAATCAGCGCACTGCTTCCTTCA
TTGAGAACGTCTTGCTATGAAAAAAACGTCAGCTGAACTAAACAGTATGC
TTAATGACATAGTTGATTTACATTCTGGCGCAAGCTCCTGAATCGTAGTG
AAACCTGAAAGTNAGCAACCGGCATGGGCCTGCAGGTATACTATGAGANG
CACTGGTTCTAGGTACTCAAGTNCTTTGTCCT
>rnd-5_family-7361#LINE/CR1 ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
GCTGACAATTTCATCTCTCAGAAGGTAGAGGAAGTAGCNAGGGGAACTGC
TACTCTGGACCTAATTCTGACCAACAAGGAAGAACTGGTTGGTGAAGTAG
AAGTGACGGGAACCTTGGGAGAAAGCGACT
>rnd-5_family-7099#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CTATGTCATTTGTTTTAATTATATTTGTTTATTTTAACTTTATTTTGTTT
GTTTATTNTTTGGCTGAGCACAGGGGACTTTATTGATGGTACACGACAAG
GTGGGGCTCCCTAGGCCCCTCCCTCTTCAAGGGGTCTGCATGGAAACTGT
GAGGAGGGGAGATTCAGTGTGGTGGGGGACTGAGTGTGGCAGGGACTCCC
CAGCAGCTGAGGGCCTCTCTTCCTCTCGTGCTCTCGCTGGGGCTGGTGGT
CCAGGGGTCTTACTCCTTGGAGGCCATGTGGGCCATGAGGTCCACCACCC
TGTTGCTGTAGCCAAATTCATTGTCATACCAGGAAATGAGCTTGACAAAG
TGGTCGTTGAGGGCAATGCCAGCCCCGGCATCGAAGGTGGAAGAGTGGGT
GTCGCTGTTGAAGTCGGAGGAGACNACCTGGTGCTCAGTGTAGCCCAGGA
TGCCCTTGAGGGGGCCCTCCGATGCCTGCTTCACCACCTTCTTGATGTCA
TCATATTTGGCAGGTTTTTCCAGATGGCAGGTCAGGTCCGCCACCGACAC
GTTGGCGGTGGGGACACGGAAGGCCATGCCAGTGAGCTTCCCGTTCAGCT
CAGGGATGACCTTGCCCACGGCCTTGGCAGCGCCAGTAGATGCAGGGATG
ATGTTCTGGAGAGCCCCACGGCCATCACGCCAACAGTTTCCCGGAGGGGC
CATCCACGGTCTTCTGGGTGGCAGTGATGGCATGGACTGTGGTCATGAGT
CCTTCCACGATACCAAAGTTGTCATGGATGACCTTGGCCAGGGGCGCTAA
GCAGTTGGTGGTGCAGGAGGCACTGCTGATGATCTTGAGGCTGTTGTCAT
ACTTCTCATGGTTCACGCCCATCGCGAACATGGGGGCATCGGCAGAGGGG
GCAGAGATGATGACCCTTTTGGCTCCCCNCTGCAAGTGAGCCCCAGCCTT
CTCCATGGTGGTGAAGACGCCAGTGGACTCCACNACGTACTCAGCGCCAG
CATCACCCCACTTGATTTTGGNGGGATCTNGCTCCTGGAAGATGGTGATG
GGATTTCCATTGATGACAAGCTTCCCGTTCTCAGCCTTGACGGTGCCGTG
GAATTTGCCATGGGTGGAATCATACTGGAACATGTAGACCATGTAGTTGA
GGTCAATGAAGGGATCATTGATGGCGACAATATCCACTTTACCAGAGTTA
AAAGCAGNCCTGGTGACCAGGCGCCCAATACGGCCAAATCCGTTGACTCC
GGCCTTCACCTTCCCCATGGTGTCTCAGGGATGCGGCTGGCGATGGGAGA
CAAGATGCGGCTGTCTGTCGAACGGGAGGAGCAGAGAG
>rnd-5_family-2155#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
GGGCTCTGGATAGAAAAAAGTCTTNTATGAGAAATAGAAGCCCCAGGCCT
AACCATATGCGGCTGCGGAGTCTAAATTTATACTNCCTGCCATGGGAATT
CCCAAGCCGNGAAATTAACATAAAAACTGGTCCCGGACCAATGANANTCT
ACTGGGATGCTCGGCAGAAGCAAACGCAAAACCGCTCTGNAGGAATGTCC
CCAGAGCCAGAAACTCACAGCAAAGTCATCCCCATTGAAGATGAGCTCAC
AATCAAAAATTACAAAACACGTCAGGAAACGATCCACTGTGAGNGAGAGT
CAGCAGACACAACAGACTAGTTAANATCTCAANAGCNTAAAATAATGAAA
GAGAACCTATTTAAAATGACTATATTTAAAATGATTATACGGATGAAAAA
ATANGGATTNGAAAAGAAAATGTAGGANATTNTAAGAACAGGCAAATTTG
AAAANGAACAAGAACTTTCTAGAAATAAAAAATTAANTACTATTGAAATC
AAAAANCTCGAGAATACGTTANATAACAGATTNAACAGATGAAGCAGAGA
GAACTAGTGAATTGGAAAATAGATCAGAAGAAATTATCCANAATGCGGCA
TGGAAAGAGGAAGAGANAAAAAAATGCGGAGAAGAAGTCAAGACATANAG
GATAGAATG
>rnd-5_family-4590#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
AGTCGATAGTATTAANATANAANGCATGCAAANATTTTCAATGAGCAACA
GACACGAGTAANANATTCACTGAAAGATGTACTAAAGACCAAACATATTT
TAAAAAGTTCAACCTTGAGTCTTANAAATATTAAAAGTTACACCGAAAGC
GAGATACTATNTTTCGCCTATCAAATTAGAAATAAAAATGTTCTAAATAT
CAGGATTAGCGGAGTGTAGGAAAACGAACGCTTCATATACTGCTAGGTGA
AAGTGCAAATTGGCGCAGNCTTTTTGGGGGCAATTTGTCAATAGTCGAAN
TTCAGAAATGTTCATACCCTTTGACCAAACAATTCCACTTCTAAGAATTT
ATCTTAGGGAAATAATTACGGATGTGTTCAAATAAAGATTNACGTANNTA
CAAGGATGTTTGCTNCAGCGTTGTTTGTAACAGCAAATATTTGAAACACA
GCCTAAATGTTCAGCATCATTTAATAAGTCATTCCACAAATATTTACCGA
GCACTTAGTAAGCTNCGGGCCGTGGACACAGTAGACCAAGTA
>rnd-5_family-7207#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TCCCTTTTGCGGCCATCACCGAAGCGGGAGCGGCCAAAATGAAGTTCAAT
CCCTTTGTGACTTCCGACCGAAGCAAGAACCGCAAAAGGCATTTCAGTGC
ACCTTCCCACGTTCGCAGGAAGATTATGTCTTCCCCTCTTTCCAAAGAGC
TGAGACAGAAGTACAACGTNCGATCCATGCCCATCCGAAAGGATGATGAA
GTTCAGGTTGTNCGAGGACACTATAAAGGTCAGCAAATTGGCAAAGTAGT
CCAGGTTTACAGGAAGAAATATGTCATCTACACTGAACGGGTGCAGCGGG
AAAAGGCTAATGGCACAACTGTCCACGTAGGCATTCACCCAGCAAGGTGG
TTATCACCAGGCTAAAACTGGACAAAGACCGCAAAAAGATCCTTGAACGG
AAAGCCAAATCTCACCAAGNAGGAAAGGAAAAGGGCAAATACAAGGAAGA
AACAATTGAGAAGATGCAGGAATAAAGTAATCTTATATACAAGCTTTNAT
TAAAACTTGAAACGAAAAG
>rnd-5_family-13397#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
CACATATATATANAAAGATATTAAGATNNAGAAAGTATATATATATACAC
ACACACATATATACACATGCACACACATATATATGTGTGTGNATTAGTGT
TTAAGAAACGTNCATCAACATATTATCTCT
>rnd-5_family-9008#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GCCTGAAACTTAGGTAAAACTAAGACATGCTTGCTCGGGAGTGACATTAN
CAAGATGGTAGAATAGGAAGCCCTGGATCCTCCTTTCCCCCANGGAGCAC
ACCGATTCAACAACAATNCATGGACAAATTCTCTTTGTGAGAAATTCAGA
AACTAGTTGAGAGGCTCCTGCACCCCGGGCGAGCATGAAACCAGCCANAC
GAAGNCTGGTAGGAAAATTTGAGGCACCCTCTCGCCATAATCCCTATCCC
CGGCGCAGCGCCATACGATTAGGAGGAAACTCCTAGCTCCCAGCTTCTCC
TTGGGGAGGGAANGAAAGCTGGACCGTACATGTCCAGCGTCCCAATTTTT
CCGGGGGCTGCCCAGGGGACTGGCTTCTGTCTTGCCTGTCTCGGAGCGCT
GACAGGACCCAGCATACTCTAGNTGCCTGGGGGGCCACTGAGAACAAAGG
CNGTAGTGAGCTGGCATTCAGGCAGTCGCCACAGCCCCTCCCTCCGGCTC
AGCGCAGACAAAGTGAGCAGAATCCCTTCTCCCNGGGAAGGAAAGAGNTG
GACCGCGTATCCAATGTCCCGACTTTTCCGGGGGCTGCCCGAGGGACTGG
CTTCTGTCTCGCCTGTCTCGGAGCGCTGACGGGACCTGGCATACTCTANA
CGCCTGGGGGCCGCTAAGAACAAAGATAGCGGTTTGGACTAGCACGAAGG
TTTGAGAAGCCCCCAGAATCTCTGACTGGGCTGATTGGTGAGGNTCTTCT
CCACAAGACGCAATCCATGAAGACCGGNAGAGGCGATCGTTTTTTTCTAA
TGCGCAAACACCAACGNAAAGAGTCAAGGAAAATGAAGAAACACNGTATA
CCAAANAAACAGACAAAAAATCAAGATAACACTCCAGAAACNAACCCTAA
TGAAACGGAGNTATGTNATCCACCTGANNGANAATTCAAAATAACCGTCA
TAAAAATGCTNAGTGAGNTCAGGAGAGCNNTGCNTGAACNAAGTGANAAT
TTCAACAAGAAGATTAAAATAAAAATAAAAAGTACCAAAC
>rnd-5_family-2390#LTR/ERVK ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGCTGGGAATACTNTGGACCCCTCNGTGGTGACTGAGCAACCCCAAGCTT
CTGGAAGAATTGGCAAAACCCGAGCTATCTGAAATAACAAGAAGAAATTG
TTGTTGATTTTTAACCTGTAAATTCTCTTAGAATTTGGTTTCCCCGAAAT
GAGTTATTTGCTTTGTGATGCTTGTTACTTACTGTATCGATTATATTTGA
GAAAATGAAGAATAATGTGAAANGCTGAGATGTAACTTGTAACTTTGGCT
CTGCTGAGCTGTAACTTGTAACTTTGGCTCTGCTGAGCTGTTCTGGTAAA
AACAGGAACTCTGTGAAAGGGACNAACCACATAGCCTGACTGCCGGAGAG
AGATGACAGCGCGTAATAGGCTTCTCGTTGCAGAGAGCCTATAAACGGAC
GTGTAATGGAGAGGCTTATTACCCGGATTCCTTTCCCAGGAAAGGCATAT
TGATTATGGCCCTGGAAAGGGAATGCGACCCTTATGGAGAGCCTATAAAC
GGACGCATGAGGGGCGTCTGTCTCTGTGGTTGAGATAAGGATGTAAAAGT
CTTTCTTCTCCCACTGCTCCTCCAGGCCTGCATGGAGGCCCCCTCCTCTT
GCAGTTTTTGTGGTCAGGCTGGTTGTCCTGTGTCAGATCCTGTTCCCCCT
GCAGCTGTGAGCCCAATGTGTTCTTGCTGATAATCATAAGTTTATGTTTA
ACCTCTATTCTTGCTAAGGTGTATGGTTTCTATGCTGACACACAGAAAGT
TATCTTTACATTGTTCTGCTTTTATAATACCACGTTGTGATTTTTGTGCA
CCAGTTTTTGCAAATGTATTCTTTTTGTATAATTATCACTGAAACTGTGT
AACCTCGCTCCCCCTCCCCTATTGAAAGAGCGTAATAAAAAACTGAGGTT
TTCAGGGGAATGTCAGACATCCACGGAGCAGCATTATGTGGTGTCTCCCC
TGGGCCCAGCTTTAAGGAAAACTTTTTCCTTGTCTTTCTCTCTTTCTTTT
TCACCGACCACTCGATCACTTTGAGAGATCTTGAACCCACGTTGATATAT
TGGGAGCTGGTCTCGC
>rnd-5_family-2875#LINE/L2 ( Recon Family Size = 20, Final Multiple Alignment Size = 15 )
ATTTGTTTAATGCCTGTCTTCCCCACTAGATTNTAAGCTCCTTGGGGGCA
AGGGCCATGTCTNATTCATCNTTGTGAATCTTTCACAGTGCCTTCCTCNT
GAGAGCTGTTTAAT
>rnd-5_family-5458#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
AAGAAAATATTCTCCCTATACATAAACGTATATAGATACATATATACGTA
TATATGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTATTGGTTCTGTTTC
TCTGGGGAACCCT
>rnd-5_family-4050#Simple_repeat ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TCTATCTATCTATCTTTATCTATCTCCTATTGGTTCTGTTTCTCTGGAGA
ACCCTAATACAA
>rnd-5_family-6438#LTR/ERVL-MaLR ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CAGACTATCAAGATGCCTGCTNCCTGGCCAAGGGGNAGGCACGNGACCCN
AGCTAAGCCAATCAGATGCTCTNTCCTGGGAATNTGATCTTGAGCCGAGG
ACACAAAGACCGAAGACAGAACTGGTTCATCCTGACAGTGGCCCGAAGAG
GCTGCCCCGTTAGTTCCTGCTCCTGGATCTCCGGAGCCGTCCCGGTTCCT
GTCCTCNCTGAGGCCTTTTCCTGTGATTCTNTGAGCTACTCTGTGNCCTT
CCAATACATTTCCTTTTGTCTTAAGTTAGCCAGNGTTNATTTCTGTTGCT
TGCAACCAAAGAACCCCAAGTAATAA
>rnd-5_family-555#DNA/hAT-Charlie ( Recon Family Size = 22, Final Multiple Alignment Size = 15 )
TTGGATTGTGGATATTATCTAACATTTAACCGTTATNCACAAAATGGGCA
AGCGGCTTAAAATATTCTCCTGNAAAGAAACCGTGGATTGAAGATAATAT
CGTAGCACAAGCACGAGCAAAGGNAAATGGCAGAGNCGACTNCTGNTCTT
AGCGCGAGTTTTCTTCAGNCACATTACAAGGTAAAAACAATGACCAATAT
TCGAATTAACAAGAAGTCTAGCCAAAANAATTAGAAATTTCCATAAAGAC
TATTAGATATAAGGACATGCACATTCGTGATGACTCTCGCCCTGTGAAGT
TTATTGTGCCTCGAGATATTAGCTAATGACAGTNATGAANCCACCANGAT
TAGCAAGACATTTTAAGCTACTGCTTATTTCATCTTTATCTCATTTTTAA
AAAATTATTTGTGTGNNTGTTTTACAATGTATANAATATATTAGTANAGT
AGTACATGTGTATNATTTATAAATAAATGACATACATATATTGGGAATAC
ACGCTCAAATTTTTTACTGATAGAGGGTGCGTAATCAAAGTT
>rnd-5_family-2965#LTR/ERVL-MaLR ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
ACCCATTTCTCTCCATTCTTCCTTNCTCAATCAGAACCCCGATTTTGTTC
AGGGTNTCACCTACATGTGCTCAGGGAAGATGAACCCCTCCCCAGCTCCA
GGGGGTGAATCATGATTGATCTAGNCCAATCATGGTAATCNCATTTCCCT
TGCCAGTGACTGATTTAGGAATGGGCATGTGACCCAATNCTGGCCAATGG
GACACGAGGGAAAGTCTNCTGGAGGCTTCNGGGAAAGGNTTCTATAACTA
AGAACAACAACAAC
>rnd-5_family-4195#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GCCAACAAGACGCAGCAAGAAACATGGGTCCCCGAGCCCGGGTCAGACTC
CATCAGGCTCTTGTCTACTTTTTCTGTTCCCGGTCGTTNAGCCCTCTGCC
CCCTCCTACTCTTTTCTCCTTACTNCTTTTGCAACGGGCNAAGTGCTTGC
GAACACCACCTGGAAGGAGAGTACCTCCGATGAAGTTTCTTTTACAATCG
ATTTATGTGTTTTGTTCCCAAAGCCCAGCCGTNCCCTCGAAGACCAGCGA
AGTATGCCCCTCTGGGCAGGAGCGGGACTCGTCGACCTCGCCGCTGGGTT
CGGACACACCGGAAGTGAGAGTGAATGCGGCAGCTCTAGGGGTGCAGAAA
AGGGACTCCAACGNGTNGATTTCTACCTCTGTCCTGGAGACCACCCTGAT
GCCGCCTGCCGGGAAGTAGTTATGAGTTTTTCTGCCCTTTTTGGTCATGT
GTAACCTTGGCTACCTACCCGGGGGAGGGCGGCCGACTCGGTCCCCAACC
CTCTCCATAGCCCGTACCTCTCATCCTAGACCATGTACTATGGGAGNCTG
TAACCCCATTGNCNTAACTGTCCATAACCCTAACTCGGTTCAATAGTACT
ACGGTATGACCTGGGGACTNNGACTNTATATCGCAGGGTTTGATCTCGGA
ACTATGTTTACCATCCAGAAGAAGGTCCTGATNCCCTGGAGNCCNCCCAA
ACCNATCGGTCCCTTAACTGATTTAGGAGACCCTATGTTCCGCCCGCACC
CAGATAAAGTCAGCCCCGTCGGCCCAACTGTCCCATTGCCAGTCCAAGCT
CCTCAACCTCGGCTNCAGCNCNAGCACCTCCAACCCAGCTTAATGTCCAT
CCTAGATGGAGTACATCACCTTCTTAATGTCACCCAGCCTAAACTGGCCC
AGGACTGTTGGTTATGCCTAAAGGCAAAACCCCCATATTATGCTGGANTG
GGAGTTCAGNTCAAGCTTAATACTGGCCCTCTCTCCTGCCNCGNNCNTCC
CCGTTCCCTTACACTGGGGGACGTTGCAGGAAACGCCTCCTGCCTAATCA
GCAATGGGTATAANCTGTCTGCTTCTCCTTTTCAGGCCACCTGTAACCGG
TCTCTACTTACTTCCCTAAACCCCTCAGTCTCCTACCAGGCACCCAACAA
TACTTGGCTGGCCTGCACCTCAGGCCTCACCCGCTGCATCAATGGGACTG
AACCTGGACCTGTCCTGTGCGTGTTAGTCCACGTGCTTCCCCAGGTCTAC
GTGTACAGCGGACCAGAAGGACGACATCTCNTCGCCCCNCCTGGACTGCA
CTCCAGGNTTCGCCAGGNTGCCCCACTCCTTGTGCCCCTCCTGGCCGGCC
TTAGCGTAGCTGGGTCGGCAGCCATCGGCACTGCNGCCCTGGTCCGAGGA
GAAACTGGACTAACGTCCCTATCTCAACAAGTAGATGCCGATTTAAGAAA
TCTCCAGTCNGCCGTAAATATGTTACATACCNAGGTAGAATCCCTAGCTG
AAGTTGTTCTCCAGAACCGCCGAGGCTTAGATCTANTGTTCCTCTCCCAA
GGAGGTTTATGTGCNGCNTTGGGGGAAAGCTGTTGTTTTTATGCTAACCA
GTCTGGAGTCATNAAAGACACTCTTCAGAGGGTTCGAGAAAATTTAGATA
AACGCCAACAGGAGCGGGAGAANAACACCCCATGGTACCAAAGCATGTTT
AACTGGAGCCCATGGCTAACTACTTTAATAACTGGGCTAGCGGGACCTCT
TCTCCTCCTCCTGTTAGGCTTAATCTTTGGGCCCTGTATACTAAACTGGC
TCCTTAATTTCGTAAGACAGCGCATAANTTCTGTCAAACTTATGTATCTC
AGAACCCACTATAACCCCCTCGCTGTAACTGAGGAGTCAATGCTTTGACT
CCCCAAAAACACAAGTGGGGA