>rnd-1_family-77#LINE/L1 ( RepeatScout Family Size = 589, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAACAAAAGTCCAGGACCAGATGGCTTCACAGGTGAATTCTATCAAACAT
TTAGAGAAGA
>rnd-1_family-98#LINE/L1 ( RepeatScout Family Size = 375, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGATGGCGGAGGAGTAAGACGCGGAGATCACCTTCCTCCCCACAAATAC
ATCAGAAATACATCTACACGTGGAACAACTCCTACAGAACACCTACTGAA
CGCTGGCAGAAGACCTCAGACCTCCCAAAAGGCAAGAAACTCCCCACGTA
CCTGGGTAGGGCAAAAGAAAAAAGAAAAAACAGAGACAAAAGAATAGGGA
CGGGACCTGCACCAGTGGGAGGGAGCTGTGAAGGAGGAAAGGTTTCCACA
CACTAGGAAGCCCCTTCGCGGGCGGAGACTGCGGGTGGCGGAGGGGGAAG
CTTCGGAGCCGCGGAGGAGAGCGCAGCAACAGGGGTGCGGAGGGCAAAGC
GGAGAGATTCCCGCACAGAGGATCGGTGCCGACCGGCACTCACCAGCCCG
AGAGGCTTGTCTGCTCACCCGCCGGGGCGGGCGGGGCTGGGAGCTGAGGC
TCGGGCTTCGGTCGGATCCCAGGGAGAGGACTGGGGTTGGCTGCGTGAAC
ACAGCCTGAAGGGGCTAGTGCGCCACGGCTAGCCGGGAGGGAGTCCGGGA
AAAAGTCTGGANCTGCCGAAGAGGCAAGAGACTTTTTCTTCCTCNTTGTT
TCNGGGTGCGCGAGGAGAGGGGATTCAGAGCGCCGCCTAAACGAGCTCCA
GAGACGGGCGCGAGCCGCGGCTATCAGCGCGGACCCCAGAGACGGGCATG
AGACGCTAAGGCTGCTGCTGCNGCCACCAAGAAGCCTGTGTGCGAGCACA
GGTCACTATCCACACCTCCCCTCCCGGGAGCCTGTGCAGCCCGCCACTGC
CAGGGTCCCGTGATCCAGGGACAACTTCCCCGGGAGAACGCACGGCGCGC
CTCAGGCTGGTGCAACGTCACGCCGGCCTCTGCCGCCGCAGGCTCGCCCC
GCATTCCGTACCCCTCCCTCCCCCCCGGCCTGAGTGAGCCAGAGCCCCCG
AATCAGCTGCTCCTTTAACCCCGTCCTGTCTGAGCGAAGAACAGACGCCC
TCAGGCGACCTACACGCAGAGGCGGGGCCAAATCCAAAGCTGAACCCCGG
GAGCTGTGCGAACAAAGAAGAGAAAGGGAAATCTCTCCCAGCAGCCTCAG
GAGCAGCGGATTAAATCTCCACAATCAACTTGATGTACCCTGCATCTGTG
GAATACCTGAATAGACAACGAATCATCCCAAAATTGAGGNGGTGGACTTT
GGGAGCAAGATATATTATTTTTTCCCCTTTTCCTCTTTTTGTGAGTGTGT
ATGTGTATGCTTCTGTGTGTGATTTTGTCTGTATAGCTTTGCTTTTACCA
TTTGTCCTAGGGTTCTGTCCGTCCGTTTTTTTGTTTTTTTTTAAATTTTT
TTTCTTAATAATTATTTTTTATTTTAATAACTTTATTTTATTTTANTTTA
TTTTATCTTCTTTCTTTCTTT
>rnd-1_family-42#LINE/L1 ( RepeatScout Family Size = 1396, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATAACTTTAAATGGAGTATAATCTATAAAAATATTGAATCACTATGTTGT
ACACCTGAAACTAATATAATATTGTAAATCAACTATACTTCAATTAAAAA
AAAA
>rnd-1_family-62#LINE/L1 ( RepeatScout Family Size = 828, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGGAAGTCCTAGCCACGGCAATCAGAGAAGAAAAAGAAATAAAAGGAATN
CAAATTGGAAAAGAAGAAGTAAAACTGTCACTGTTTGCAGATGACATGAT
ACTATACATAGAGAATCCTAAAGACGCCACCAGAAAA
>rnd-1_family-40#LINE/L1 ( RepeatScout Family Size = 1424, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAAGATGGCGGAGTAGAAGGACGTGCNCTCACTCCCTCTTGCGAGAGCAC
CGGAATCACAACTAACTGCTGAACAATCATCGACAGGAAGACACTGGAAC
TCACCAAAAAAGATACCCCACATCCAAAGACAAAGGAGAAGCCGCAATGA
GACGGTAGGAGGGGCGCAATCACAATAAAATCAAATCCCATAACCGCTGG
GTGGGTGACTCACAAACTGGAGAACACTTATACCACAGAAGTCCACCCAC
TGGAGTCACAAACTGGAGAACACTTATACCACAGAAGTCCACCCACTGGA
GTGAAGGTTCTGAGCCCCACGTCAGGCTTCCCAACCTGGGGGTCCGGCAA
CGGGAGGAGGAATTCCTAGAGAATCAGACTTTGAAGGCTAGCGGGATTTG
ATTGCAGGACTTCGACAGGACTGGGGGAAACAGAGACTCCACTCTTGGAG
GGCACACACAAAGTAGTGTGCGCATCGGGACCCAGGGGAAGGAGCAGTGA
CCCCATAGGAGACTGAACCAGACCTACCTGCTAGTGTTGGAGGGTCTCCT
GCAGAGGCGGGGGGTGGCTGTGGCTCACCGTGGGGACAAGGACACTGGCA
GCAGAAGTTCTGGGAAGTACTCCTTGGCGTGAGCCCTCCCAGAGTCCGCC
ATTAGCCCCACCAAAGAGCCCGGGTAGGCTCCAGTGCTGGGTCGCCTCAG
GCCAAACAACCAACAGGGAGGGAACCCAGCCCCACCCATCAGCAGACAAG
CGGATTAAAGTTTTACTGAGCTCTGCCCACCAGAGCAACAGCCAGCTCTA
CCCACCACCAGTCCCTCCCATCAGGAAGCTTGCACAAGCCTCTTAGATAG
CCTCATCCACCAGAGGGCAGACAGCAGAAGCAAGAAGAACTACAATCCTG
CAGCCTGTGGAACGAAAACCACATTCACAGAAAGATAGACAAGATGAAAA
GGCAGAGGGCTATGTACCAGATGAAGGAACAAGATAAAACCCCAGAAAAA
CAACTAAATGAAGTGGAGATAGGCAACCTTCCAGAAAAAGAATTCAGAAT
AATGATAGTGAAGATGATCCAGGACCTCGGAAAAAGAATGGAGGCAAAGA
TCGAGAAGATGCAAGAAATGTTTAACAAAGACCTAGAAGAATTAAAGAAC
AAACAAACAGAGATGAACAATACAATAACTGAAATGAAAAATACACTAGA
AGGAATCAATAGCAGAATAACTGAGGCAGAAGAACGGATAAGTGACCTGG
AAGACAGAATGGTGGAATTCACTGCCGCGGAACAGAATAAAGAAAAAAGA
ATGAAAAGAAATGAAGACAGCCTAAGAGACCTCTGGGACAACATTAAACG
CAACAACATTCGCATTATAGGGGTCCCAGAAGGAGAAGAGAGAGAGAAAG
GACCCGAGAAAATATTTGAAGAGATTATAGTCGAAAACTTCCCTAACATG
GGAAAGGAAATAGCCACCCAAGTCCAGGAAGCGCAGAGAGTCCCATGCAG
GATAAACCCAAGGAGAAACACGCCGAGACACATAGTAATCAAATTGGCAA
AAATTAAAGACAAAGAAAAATTATTGAAAGCAGCAAGGGAAAAACGACAA
ATAACATACAAGGGAACTCCCATAAGGTTAACAGCTGATTTCTCAGCAGA
AACTCTACAAGCCAGAAGGGAGTGGCATGATATACTTAAAGTGATGAAAG
GGAAGAACCTACAACCAAGATTACTCTACCCGGCAAGGATCTCATTCAGA
TTCGATGGAGAAATCAAAAGCTTTACAGACAAGCAAAAGCTAAGAGAATT
CAGCACCACCAAACCAGCTCTACAACAAATGCTAAAGGAACTTCTCTAAG
TGGGAAACACAAGAGAAGAAAAGGACCTACAAAAACAAACCCAAAACAAT
TAAGAAAATGGTAATAGGAACATACATATCGATAATTACCTTAAACGTGA
ATGGATTAAATGCTCCAACCAAAAGACACAGGCTCGCTGAATGGATACAA
AAACAAGACCCATATATATGCTGTCTACAAGAGACCCACTTCAGACCTAG
GGACACATACAGACTGAAAGTGAGGGGATGGAAAAAGATATTCCATGCAA
ATGGAAATCAAAAGAAAGCTGGAGTAGCAATACTCATATCAGATAAAATA
GACTTTAAAATAAAGAATGTTACAAGAGACAAGGAAGGACACTACATAAT
GATCAAGGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATG
CACCCAACATAGGAGCACCTCAATACATAAGGCAACTGCTAACAGCTATA
AAAGAGGAAATCGACAGTAACACAATAATAGTGGGGGACTTTAACACCTC
ACTTACACCAATGGACAGATCATCCAAACAGAAAATTAATAAGGAAACAC
AAGCTTTAAATGACACAATAGACCAGATAGATTTAATTGATATTTATAGG
ACATTCCATCCAAAAACAGCAGATTACACTTTCTTCTCAAGTGCGCACGG
AACATTCTCCAGGATAGATCACATCTTGGGTCACAAATCAAGCCTCAGTA
AATTTAAGAAAATTGAAATCATATCAAGCATCTTTTCTGACCACAACGCT
ATGAGATTAGAAATCAATTACAGGGAAAAAAACGTAAAAAACACAAACAC
ATGGAGGCTAAACA
>rnd-1_family-102#LTR/ERVL-MaLR ( RepeatScout Family Size = 343, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTATGGGTTGAATTGTGTCCCCCCAAAATTCATATGTTGAAGTCCTAACC
CCCAGTACCTCAGAATGTGACCTTATTTGGAAATAG
>rnd-1_family-18#LINE/L1 ( RepeatScout Family Size = 4258, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAATAAGAAAACAACCCAATTAAAAAATGGGCAAAAGACCTGAACAGACA
CCTCACCAAAGAAGATATACAGATGGCAAATAAGCACATGAAAAGATGCT
CNACATCATATGTCATCAGGGAAATGCAAATTAAAACACAATGAGATACC
ACTACACACCTATTAGAATGGCCAAAATCCAGAACACTGACAACACCAAA
TGCTGGCGAGGATGTGGAGCAACAGGAACTCTCATTCATTGCTGGTGGGA
ATGCAAAATGGTACAGCCACTTTGGAAGACAGTTTGGCAGTTTCTTACAA
AACTAAACATACTCTTACCATACGATCCAGCAATCGCGCTCCTTGGTATT
TACCCAAAGGAGNTGAAAACTTATGTCCACACAAAAACCTGCACACGGAT
GTTTATAGCAGCTTTATTCATAATTGCCAAAACTTGGAAGCAACCAAGAT
GTCCTTCAGTAGGTGAATGGATAAATAAACTGTGGTACATCCANACAATG
GAATATTATTCAGCGNTAAAAAGAAATGAGCTATCAAGCCATGAAAAGAC
ATGGAGGAACCTTAAATGCATATTGCTAAGTGAAAGAAGCCAGTCTGAAA
AGGCTACATACTGTATGATTCCAACTATATGACATTCTGGAAAAGGCAAA
ACTATGGAGACAGTAAAAAGATCAGTGGTTGCCAGGGGTTGGGG
>rnd-1_family-35#LINE/L1 ( RepeatScout Family Size = 2046, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAATAACAAGTGTTGGCGAGGATGTGGAGAAANNGGAACCCTCGTGCACT
GCTGGTGGGAATGTAAANTGGTGCAGCCGCTGTGGAAAACAGTATGGCGG
TTCCTCAAAAAATTAAA
>rnd-1_family-101#LINE/L2 ( RepeatScout Family Size = 358, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAGTGCCTGGCACATAGTAGGTGCTCAATAAATATTTGTTGAATGAATGA
AT
>rnd-1_family-87#SINE/MIR ( RepeatScout Family Size = 463, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TACCTCATAGGGTTGTTGTGAGGATTAAATGAGNTAATATATGTAAAGCG
CTTAGAACAGTGCCTGGCACAT
>rnd-1_family-90#DNA/hAT-Charlie ( RepeatScout Family Size = 435, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CTCAAAGTGTGGTCCCCGGACCAGCAGCATCAGCATCACCTGGGAACTTG
TTAGAAATGCAAATTCTCGGGCCCCACCCCAGACCTACTGAATCAGAAAC
T
>rnd-1_family-39#SINE/MIR ( RepeatScout Family Size = 1505, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTGTGACCTTGGGCAAGTTACTTAACCTCTCTGNGCCTCAGTTTCCTCA
TCTGTAAAATGG
>rnd-1_family-110#LINE/L1 ( RepeatScout Family Size = 239, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGAAATTGACAAGCTGATCCTAAAATTCATATGGAAATGCAAGGGACCCA
GAATAGCCAAAACAATCTTGAAAAAGAA
>rnd-1_family-66#LINE/L1 ( RepeatScout Family Size = 771, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATCAATGGAACAGAATAGAGAGCCCAGAAATAAACCCACGCACATATGGT
CAATTAATCTT
>rnd-1_family-1#SINE/tRNA ( RepeatScout Family Size = 12676, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCCGTGAGCCATGGCCGCTGAGCCTGCGCGTCCGGAGCCTGTGCTCCGCA
ACGGGAGAGGCCACAACAGTTTTTGAGTACTTGTTACGTATCAGGCTCCA
GAATTCAGGGGTAAATAAGACACAAAAGCCATGATGGAGCTTTTGTCCTG
AAAGGTAGAAGTTACAAATGGGTATCCACTCCCTTTACTGCCTCAATTCC
AGTTCAGCCTGCTGACAGCGTTTGATTACCCTTCACTCAAAAACAGTTGA
GGGCTTCCCTGGTGGCGCAGTGGTTGAGAGTCCGCCTGCCGATGCAGGGG
ACACGGGTTCGTGCCCCGGTCCGGGAAGATCCCACATGCCGCGGAGCGGC

>rnd-1_family-0#SINE/tRNA ( RepeatScout Family Size = 17795, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGCAGGGGACACGGGTTCGTGCCCCGGTCCGGGAAGATCCCACATGCCGC
GGAGCGGCTGGGCCCGTGAGCCATGGCCGCTGAGCCTGCGCGTCCGGAGC
CTGTGCTCCGCAACGGGAGAGGCCACAACAGTGAGAGGCCCGCGTACCGC
AAAAAAAAAAAAAAAAGTTATAAAATAGATAANCAACAAGGACCTACTGT
ATAGCACAGGGAACTCTACTCAATATTCTGTAATAACCTATAATGGAAAA
GAATCTGAAAAAGAATAGATATATGTATATGTATAACTGAATCACTTTGC
TGTACACCTGAAACTAACACAACATTGTAAATCAACTATACTCCAATAAA
AAAAAATTTTTTTAAAGAGTTTATAGGGCTTCCCTGGTGGCGCAGTGGTT
GAGAGTCCGCCTGCCGATGCAGGGGACACGGGTTCGTGCCCCGGTCCGGG
AAGATCCCACATGCCGCGGAGCGGCTGGGCCCGTGAGCCATGGCCGCTGA
GCCTGCGCGTCCGGAGCCTGTG
>rnd-1_family-114#LTR/ERVL-MaLR ( RepeatScout Family Size = 232, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTTTTAAGCCACTAAGTTTGGGGTAATTTGTTACAGCAGCAATAGATAA
CTAATACA
>rnd-1_family-12#LINE/L1 ( RepeatScout Family Size = 8016, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGGAGAAAATACAAGAAACGTTTAACAAGGACCTAGAAGAACTAAAGAG
CAAACAAACAATGATGAACAACACAATAAATGAAATTAAAAATNCTCTAG
AAGGAATCAATAGCAGAATAACTGAGGCAGAAGAACGGATAAGTGACCTG
GAAGATAAAATAGTGGAAATAACTACCGCAGAGCAGAATAAAGAAAAAAG
AATGAAAAGAATTGAGGACAGTCTCAGAGACCTCTGGGACAACATTAAAC
GCACCAACATTCGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAAGAAA
GGGACTGAGAAAATATTTGAAGAGATTATAGTTGAAAACTTCCCTAATAT
GGGAAAGGAAATAGTCAATCAAGTCCAGGAAGCGCAGAGAGTCCCATACA
GGATAAATCCAAGGAGAAACACGCCAAGACACATATTAATCAAACTATCA
AAAATTAAATACAAAGAAAAAATATTAAAAGCAGCAAGGGAAAAGCAACA
AATAACATACAAGGGAATCCCCATAAGGTTAACAGCTGATCTTTCAGCAG
AAACTCTGCAAGCCAGAAGGGAGTGGCAGGACATATTTAAAGTGATGAAA
GGGAAAAACCTACAACCAAGATTACTCTACCCAGCAAGGATCTCATTCAG
ATTCGACGGAGAAATTAAAACCTTTACAGACAAGCAAAAGCTAAGAGAAT
TCAGCACCACCAAACCAGCTTTACAACAAATGCTAAAGGAACTTCTCTAG
GCGGGAAACACAAGAGAAGGAAAAGACCTACAATAACAAACCCAAAACAA
TTAAGAAAATGGTAATAGGAACATACATATCGATAATTACCTTAAATGTA
AATGGATTAAATGCTCCAACCAAAAGACACAGACTGGCTGAATGGATACA
AAAACAAGACCCGTATATATGCTGTCTACAAGAGACCCACTTCAGACCTA
GGGACACATACAGACTGAAAGTGAGGGGATGGAAAAAGATATTCCATGCA
AATGGAAATCAAAAGAAAGCTGGAGTAGCAATTCTCATATCAGACAAAAT
AGACTTTAAAATAAAGACTATTACAAGAGACAAAGAAGGACACTACATAA
TGATCAAGGGATCAATCCAAGAAGAAGATATAACAATTGTAAATATTTAT
GCACCCAACATAGGAGCACCTCAATACATAAGGCAAATGCTAACAGCCAT
AAAAGGGGAAATCGACAGTAACACAATCATAGTAGGGGACTTTAACACCC
CACTTTCACCAATGGACAGATCATCCAAAATGAAAATAAATAAGGAAACA
CAAGCTTTAAATGATACATTAAACAAGATGGACTTAATTGATATTTATAG
GACATTCCATCCAAAAACAACAGAATACACTTTCTTCTCAAGTGCTCATG
GAACATTCTCCAGGATAGATCATATCTTGGGTCACAAATCAAGCCTCGGT
AAATTTAAGAAAATTGAAATCGTATCAAGTATCTTTTCCGACCACAACGC
TATGAGACTAGATATCAATTACAGGAAAAAANCTGTAAAAAATACAAACA
CATGGAGGCTAAACAATACGCTACTNAATAACCAAGAGATCACTGAAGAA
ATCAAAGAGGAAATCAAAAAATACCTAGAAACAAATGACAATGAAAACAC
GACGACCCAAAACCTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGT
TTATAGCAATACAATCCTACCTCAAGAAACAAGAAACATCTCAAATAAAC
AACCTAACCTTACACCTAAAGCAATTAGAGAAAGAAGAACAAAAAAACCC
CAAAGTTAGCAGAAGGAAAGAAATCATAAAGATCAGATCAGAAATAAATG
AAAAAGAAATGAAGGAAACGATAGCAAAGATCAATAAAACTAAAAGCTGG
TTCTTTGAGAAGATAAACAAAATTGATAAACCATTAGCCAGACTCATCAA
GAAAAAAAGGGAGAAGACTCAAATCAATAGAATTAGAAATGAAAAAGGAG
AAGTAACAACTGACACTGCAGAAATACAAAGGATCATGAGAGATTACTAC
AAGCAACTCTATGCCAATAAAATGGACAACCTGGAAGAAATGGACAAATT
CTTAGAAANGCACAACCTTCCGAGACTGAACCAGGAAGAAATAGAAAATA
TGAACAGACCAATCACAAGCACTGAAATTGAAACTGTGATTAAAAATCTT
CCAACAAACAAAAGCCCAGGACCAGATGGCTTCACAGGCGAATTCTATCA
AACATTTAGAGAAGAGCTAACACCTATCCTTCTCAAACTCTTCCAAAATA
TAGCAGAGGGAGGAACACTCCCAAACTCATTCTACGAGGCCACCATCACC
CTGATACCAAAACCAGACAAAGATGTCACAAAGAAAGAAAACTACAGGCC
AATATCACTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAA
ACAGAATCCAACAGCACATTAAAAGGATCATACACCATGATCAAGTGGGG
TTTATCCCAGGAATGCAAGGATTCTTCAATATACGCAAATCAATCAATGT
GATACACCATATTAACAAATTGAAGGAGAAAAACCATATGATCATCTCAA
TAGATGCAGAAAAAGCTTTCGACAAAATTCAACACCCATTTATGATAAAA
ACCCTCCAGAAAGTAGGCATAGAGGGAACTTACCTCAACATAATAAAGGC
CATATATGACAAACCCACAGCCAACATCGTTCTCAATGGTGAAAAACTGA
AACCATTTCCNCTAAGATCAGGAACAAGACAAGGTTGCCCACTCTCACCA
CTATTATTCAACATAGTTTTGGAAGTTTTAGCCACAGCAATCAGAGAAGA
AAAAGAAATAAAAGGAATCCAAATCGGAAAAGAAGAAGTAAAGCTGTCAC
TGTTTGCAGATGACATGATACTATACATAGAGAATCCTAAAGATGCTACC
AGAAAACTACTAGAGCTAATCAATGAATTTGGTAAAGTAGCAGGATACAA
AATTAATGCACAGAAATCTCTTGCATTCCTATACACTAATGATGAAAAAT
CTGAAAGAGAAATTAAGGAAACACTCCCATTTACCATTGCAACAAAAAGA
ATAAAATACCTAGGAATAAACCTACCTAAGGAGACAAAAGACCTGTATGC
AGAAAACTATAAGACACTGATGAAAGAAATTAAAGATGATACAAACAGAT
GGAGAGATATACCATGTTCTTGGATTGGAAGAATCAACATTGTGAAAATG
ACTATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAACT
ACCAATGGCATTTTTCACAGAACTAGAACAAAAAATTTCACAATTTGTAT
GGAAACACAAAAGACCCCGAATAGCCAAAGCAATCTTGAGAAAGAAAAAC
GGAGCTGGAGGAATCAGGCTCCCTGACTTCAGACTATACTACAAAGCTAC
AGTAATCAAGACAGTATGGTACTGGCACAAAAACAGAAATATAGATCAAT
GGAACAGGATAGAAAGCCCAGAGATAAACCCACGCACATATGGTCACCTT
ATCTTTGATAAAGGAGGCAAGAATATACAATGGAGAAAAGACAGCCTCTT
CAATAAGTGGTGCTGGGAAAACTGGACAGCTACATGTAAAAGAATGAAAT
TAGAACACTCCCTAACACCATACACAAAAATAAACTCAAAATGGATTAAA
GACCTAAATGTAAGGCCAGACACTATNAAACTCTTAGAGGAAAACATAGG
CAGAACACTCTATGACATAAATCACAGCAAGATCCTTTTTGACCCACCTC
CTAGAGAAATGGAAATAAAAACAAAAATAAACAAATGGGACCTAATGAAA
CTTAAAAGCTTTTGCACAGCAAAGGAAACCATAAACAAGACGAAAAGACA
ACCCTCAGAATGGGAGAAAATATTTGCAAATGAAGCAACTGACAAAGGAT
TAATCTCCAAAATNTACAAGCAGCTCATGCAGCTCAATATCAAAAAAACA
AACAACCCAATCCAAAAATGGGCAGAAGACCTAAATAGACATTTCTCCAA
AGAAGATATACAGATTGCCAACAAACACATGAAAGGATGCTCAACATCAC
TAATCATTAGAGAAATGCAAATCAAAACTACAATGAGGTATCACCTCACA
CCGGTCAGAATGGCCATCATCAAAAAATCTACAAACAATAAATGCTGGAG
AGGGTGTGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAATGTAAAT
TGATACAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAAACTAAAA
ATAGAACTACCATACGACCCAGCAATCCCACTACTGGGCATATACCCTGA
GAAAACCATAATTCAAAAAGAGTCATGTACCACAATGTTCATTGCAGCTC
TATTTACAATAGCCAGGACATGGAAGCAACCTAAGTGTCCATCGACAGAT
GAATGGATAAAGAAGATGTGGCACATATATACAATGGAATATTACTCAGC
CATAAAAAGAAACGAAATTGAGTTATTTGTAGTGAGGTGGATGGACCTAG
AGTCTGTCATACAGAGTGAAGTAAGTCAGAAAGAGAAAAACAAATACCGT
ATGCTAACACATATATATGGAATCTAAAAAAAAAAAATGTCATGAAGAAC
CTAGGGGCAGGACAGGAATAAAGACGCAGACGTAGAGAACGGACTTGAGG
ACACGGGGAGGGGGAAGGGTAAGCTGGGACGAAGTGAGAGAGTGGCATGG
ACATATATACACTACCAAATGTAAAATAGATAGCTAGTGGGAAGCAGCCG
CATAGCACAGGGAGATCAGCTCGGTGCTTTGTGACCACCTAGAGGGGTGG
GATAGGGAGGGTGGGAGGGAGGGAGACGCAAGAGGGAGGAGATATGGGGA
TATATGTATACGTATAGCTGATTCACTTTGTTATAAAGCAGAAACTAACA
CACCATTGTAAAGCAATTATACTCCAATAAAGATGTTAAAAAAAAAAAAA
AAA
>rnd-1_family-9#SINE/tRNA ( RepeatScout Family Size = 8370, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGACTTCCCTGGCGGTCCAGTGGTTAAGACTTCGCCTTCCAATGCAGGG
GGTGCGGGTTCGATCCCTGGTCGGGGAGCTAAGATCCCACATGCCTCGCG
GCCAAAAAACCAAAACATAAAACAGAAGCAATATTGTAACAAATTCAATA
AAGACTTTAAAAATGGTCCACATCAAAAAAAAAAAATCTTAAAAAAAAAA
AAAA
>rnd-1_family-13#SINE/tRNA ( RepeatScout Family Size = 7449, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGAATTCCCTGGCGGTCCAGTGGTTAGGACTCCGCGCTTTCACTGCCGA
GGGCCCGGGTTCAATCCCTGGTCGGGGAACTAAGATCCCGCAAGCCGCGC
GGCGCGGCCAAAAAAAAAAAAAAAAAAA
>rnd-1_family-28#LINE/L1 ( RepeatScout Family Size = 2682, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TCAATATTCTGTAATAACCTAAATGGGAAAAGAATTTGAAAAAGAATAGA
TACATGTATATGTATAACTGAATCACTTTGCTGTACACCTGAAACTAACA
CAACATTGTTAATCAACTATACTCCAATATAAAATAAAAATTTTAAA
>rnd-1_family-88#LINE/L1 ( RepeatScout Family Size = 453, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAACTAAAAGCTGGTTCTTTGAGAAGATAAACAAAATTGATAAACCNTTA
GCCAGACTCATCAAGAAAAAAA
>rnd-1_family-136#DNA/TcMar-Tigger ( RepeatScout Family Size = 128, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGTACAGTTGACCCTTGAACAACACGGGTTTGAACTGCGCGGGTCCACT
TATACGCGGATTTTTTTCAATAAATACTACAGTACTACACGATCCGCGGT
TGGTTGAAT
>rnd-1_family-128#LTR/ERVL-MaLR ( RepeatScout Family Size = 174, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTTTTAAGCCACTAAGTTTTGGGGTAATTTGTTACGCAGCAATAGATAA
CTAATACA
>rnd-1_family-80#LTR/ERVL-MaLR ( RepeatScout Family Size = 551, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTCATATGTTGAAGTCCTAACCCCCAGTACCTCAGAATGTGACTGTATTT
GGAGATAGGGTCTTTAAAGAGGTAATTAAGTTAAATGAGGTCATTAGGGT
GGGCCCTAATCCAATATGACTGGTGTCCTTATAAGAAGAGGA
>rnd-1_family-7#SINE/tRNA ( RepeatScout Family Size = 8389, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGACTTCCCTGGCGGTCCAGTGGTTAAGACTCCGCGCTTCCACTGCAGG
GGGCACGGGTTCGATCCCTGGTCGGGGAACTAAGATCCCGCATGCCGCGC
GGCGCGGCCAAA
>rnd-1_family-144#LTR/ERV1 ( RepeatScout Family Size = 104, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CTTTGAGCTGTTTTGCAGATACTGAAACCCCCACCAGGTGGAAGAAGTTA
ACTACATGCTGACCACGAGCACGTAGACCCCAGACGGTTGGAACCAGAAG
GTTGATGATGCTGACTCCCGGTTACCTCACCACCAACCAATCAGAAGAAT
GTCCACGAGCTGATCA
>rnd-1_family-20#LINE/L1 ( RepeatScout Family Size = 3554, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGATGTGGTACATATATACAATGGAATACTACTCAGCCATAAAAAAGAA
TGAAATAATGCCATTTGCAGCAACATGGATGGACCTAGAGATTATCATAC
TAAGTGAAGTAAGTCAGAAAGAGAAAGACAAATACCATATGATATCACTT
ATATGTGGAATCTAAAATATGACACAAATGAACTTATCTACGAAACAGAA
ACAGACTCACAGACATAGAGAACAGACTTGTGGTTGCCAAGGGGGGAGGG
ATGGATTGGGAGTTTGGGATTAGCAGATGCAAACTATTATATATAGAATG
GATAAACAACAAGGTCCTACTGTATAGCACAGGGAACTATATTCAATATC
CTGTGATAAACCATAATGGAAAAGAATATGAAAAAGAATGTATATATATG
TATAT
>rnd-1_family-6#SINE/tRNA ( RepeatScout Family Size = 8428, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGACTTCCCTGGCGGTCCAGTGGTTAAGACTCCGCGCTTCCACTGCAGG
GGGCACGGGTTCGATCCCTGGTCGGGGAACTAAGATCCCGCATGCCGCGC
GGCGCGGCCAAAAAAAAAAAAA
>rnd-1_family-138#DNA/hAT-Charlie ( RepeatScout Family Size = 118, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GCAGGAGGTGAGCGGCGGGCGAGCGAGCGAAGCTTCATCTGTATTTACAG
CCGCTCCCCATCGCTCGCATTACCGCCTGAGCTCCGCCTCCTGTCAGATC
AGCGGCGGCATTAGATTCTCATAGGAGCGCGAACCCTACTGTGAACTGCG
CATGCGAGGGATCTAGGTTGCGCGCTCCTTATGAGAATCTAATGCCTGAT
GATCTGAGGTGGAGCTGAGGCGGTGATGCTAGCGCTGGGGAGCGGCTGCA
AATACAGATTATCATTAGCAGAGAGGTTTGACTGCACAGAGACCATAATA
AATCAATTGCTTGCAGACTCATATCAAAACCCTATCAGTGAGTGGCAAGT
GAAAACAAGCTCAGGGCTCCCACTGATTCTGCATTATGGTGAGTTGTATA
ATTATTTCATTATATATTACAATGTAATAATAATAGAAATAAAGTGCACA
ATAAATGTAATGCGCTTGAATCATCCCGAAACCATCCCCCCCCCCCACC
>rnd-1_family-124#LINE/L1 ( RepeatScout Family Size = 184, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAAGATGGCGGAGTAGGAGGACGCTGAGCTCACCTCCTCCCACGAGCACA
CCAAAATCACAACTANNTGCGGAACAACTATCGACGAGAACGACCTGAAG
ACTAGCAGAAAAGATNTTCCACAACCAAAGATATAAAGA
>rnd-1_family-96#DNA/hAT-Charlie ( RepeatScout Family Size = 383, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCAGACCTACTGAATCAGAAACTCTGGGGGTGGGGCCCAGCAATCTGTGT
TTTAACAAGCCCTCCAGGTGATTCTGATGCACGCTAAAGTTTGAGAACCA
CTG
>rnd-1_family-95#Simple_repeat ( RepeatScout Family Size = 384, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCCCCACCCCCCTCCCCCCTGGCAACCACCAGTCTGTTCTCTGTATCTGT
GAGTCTGTTTCTGTTT
>rnd-1_family-107#LINE/L1 ( RepeatScout Family Size = 287, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GATGTTNACTAAACTTATTGTGGTAATCATTTCACGATGTATGTAAGTCA
AATCATTATGCTGTACACCTTAAACTTATACAGTGCTGTATGTCAATTAT
ATCTCAATAAAACTGGAAGAAAAAAA
>rnd-1_family-52#LINE/L1 ( RepeatScout Family Size = 1002, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TAGAGAACAAACTAGTGGTTACCAGTGGGGAGAGGGAAGGGGGGAGGGGC
AANATAGGGGTAGGGGATTAAGAGGTACAAACTATTAGGTATAAAATAAG
CTACAAGGATATATTGTACAACACGGGGAATATAGCCAATATTTTATAAT
AACTATAAATGGAGTATAACCTTTAAAAATTGT
>rnd-1_family-59#LINE/L1 ( RepeatScout Family Size = 872, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGGAGGGGGAATTGGATGAAGGCGGTCAAAAGGTACAAACTTCCAGTTA
TAAGATAAATAAGTACTAGGGATGTAATGTACAACATGATGAATATAGTT
AACACTGCTGTATGTTATATATGAAAGTTGTTAAGAGAGTAAAATCCTAA
GAGTTCTCATCACAAGGAAAAAATTTTTTTTTTTCTTTAATTTTGTATCT
ATATGAGATGATGGATGTTCACTAACTTATTGTGGTAATCATTTCACGAT
GTATGTAAGTCAAATCATTATGCTGTACACCTTAAACTTATACAGTGCTG
TATGTCAATTATATCTCAATAAAACTGGAAGAAAAAA
>rnd-1_family-99#LINE/L1 ( RepeatScout Family Size = 365, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AATAAGTTCTGGGGATCTAATGTACAGCATGGTGACTATAGTTAATAATA
CTGTATTGTATACTTGAAAGTTGCTAAGAGAGTAGATCTTAAATGTTCTC
ACCACAAGAAAAAAA
>rnd-1_family-120#LTR/ERVL-MaLR ( RepeatScout Family Size = 218, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGGGTGGGCCCTAATCCAATATGACTGGTGTCCTTATAAAAAGGGAAATT
TGGACACAGAGA
>rnd-1_family-73#LINE/L1 ( RepeatScout Family Size = 647, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGCTCAACATCACTAATTATTAGAGAAATGCAAATCAAAACTACAATGA
GGTATCACCTCACACCAGTCAGAATGGCCATCATCAAA
>rnd-1_family-33#LINE/L1 ( RepeatScout Family Size = 2135, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TACCATATGACCCAGCAATTCCACTCCTAGGTATNTACCCAAGAGAAATG
AAAACATATGTCCACACAAAAACTTGTACACGAATGTTCATAGCAGCNTT
ATTCATAATAGCCAAAAANTGGAAACAA
>rnd-1_family-132#LTR/ERVL ( RepeatScout Family Size = 147, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAGACTGGAACTTACACCATCGGCTCTCCTGGTTCTCAGGCCTTCGGACT
CGGACTGAACTACACCACCGGCTCTCCTGGGTCTCCAGCTTGCAGACGGC
AGATCGTGGGACTTCTCAGCCTCCATAATCGCGTGAGCCAATTCCT
>rnd-1_family-3#SINE/tRNA ( RepeatScout Family Size = 10885, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAACACTATCTTTAGTATATTCCCGAATGTTGCATGGGAGATACTTGTG
CTAAAGATCTTACCAAGTAAAATAAAACATTTATTTACTAGTAATGCCAA
TAATTAAGAAACAATACTTAGTATTTTTAAAAGCAAACAGANATCTGTCT
TTAGTATATCCCAAATATCACAAGATTTAGGTGCCCTAAAATGAGTTATA
TATACACTACTATATATAAAATAGATAACCAACAGGACCTACTGTATAGC
ACAGGGAACTCTACTCAATACTCTGTAATAACCTANATGGGAAAAGAATC
TGAAAAAGAATGGATATATGTATATGTATAACTGANTCACTTTGCTGTAC
ACCNGAAACTAACACAACATTGTAAATCAACTATACTCCAATTAAATAAA
AATTAAAGAAATAAAATGAGATGGTTTTAATGAAATTTCATTTTAAAAAA
TAAGTAACAGGGGCTTCCCTGGTGGCGCAGTGGTTGAGAGTCCGCCTGCC
GATGCAGGGGACACGGGTTCGTGCCCCGGTCCGGGAAGATCCCACATGCC
GCGGAGCGGCTGGGCCCGTGAGCCATGGCCGCTGAGCCTGCGCGTCCGGA
GCCTGTGCTCCGCAACGGGAGAGGCCACAACAGTGAGA
>rnd-1_family-78#LINE/L1 ( RepeatScout Family Size = 575, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TAAAAGCAGCAAGGGAAAAACGACAAATAACATACAAGGGAACCCCCATA
AGGTTANCAGCTGATTTTTCAGCAGAAACTCTGCAGGCCAGAAGGGAGTG
GCACGATATATTTAAAGTGATGAAAGGGAAAAACCTACAACCAAGATTAC
TCTACCCAGCAAGGATCTCATTCAGATTCGACGGAGAAATCAAAAGCTTT
ACAGACAAGCAAAAGCTAAGAGAATTCAGCACCACCAAACCAGCTTTACA
ACAAATGCTAAAGGAACTTCTCTAAGCGGGAAACACAAGAGAAGAAAAGG
ACCTACAAAAACAAACCCAAAACAATTAAGAAA
>rnd-1_family-56#LINE/L1 ( RepeatScout Family Size = 912, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TAAATAAATGGAAAGACATCCCATGTTCATGGATTGGAAGANTTAATATT
GTTAAGATGGCAATACTNCCCAAANCGATCTACAGATTCA
>rnd-1_family-37#LINE/L1 ( RepeatScout Family Size = 1902, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGGCGGTTCCTCAAAAAATTAAAAATAGAATTACCATATGATCCAGCAA
TTCCACTTCTGGGTATATACCCAAAAGAANTGAAAGCAG
>rnd-1_family-25#LINE/L1 ( RepeatScout Family Size = 2981, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATATATAAAATAGATAACTAATAAGGACCTACTGTATAGCACAGGGAACT
CTACTCAATACTCTGTAATGACCTATATGGGAAAAGAATCTAAAAAAGAG
TGGATATATGTATATGTATAACTGATTCACTTTGCTGTACACCTGAAACT
AACACAACATTGTAAATCAACTATACTCCAATAAAAATTTTTAAAAAAAA
AA
>rnd-1_family-89#LINE/L1 ( RepeatScout Family Size = 442, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AACAGAAGGGCCCACGCAGCCCACATAGGGGGCACCCCTAGAGCATATAG
CTCTGGTGACCAGAGGGGAGTGCGCTGCTGGGCCNCATAGGACGTCTCCT
ACATAAGGCCACTTCTCCAAGATCGGGAAACGTAACCGACCTACCTAATA
CATAGAAATAAACACAGAAAGTTAGGCAAAATGAGAAGACAGAGGAATAT
GTTCCAGATGAAGGAACAAGATAAAACCCCAGAAGAACAACTAAATGAAG
TGGAGATAGGCAATCTACCCGANAAAGAGTTCAGAGTAATGATAGTAAAG
ATGATACCGAACTCGGGAAAAGAATGGANGAACANAGTGAGAAGTTTAA
>rnd-1_family-126#DNA/hAT-Charlie ( RepeatScout Family Size = 177, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGACCTGCGCTGTCCAATATGGTAGCCACTAGCCACATGTGGCTATTGAG
CACTTGAAAT
>rnd-1_family-82#LINE/L1 ( RepeatScout Family Size = 522, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGTGGGGGAAATGGGTGAAGGCGGTCAAAAGGTACAAACTTCCAGTTAT
AAGATAAATAAGTCCTGGGGATGTAATGTACAGCATGGTGACTATAGTTA
ACAATACTGTATTGTATATTTGAAAGTTGCTAAGAGAGTAGATCTTAAAA
GTTCTCATCACAAGAAAAAAA
>rnd-1_family-111#LTR/ERVL-MaLR ( RepeatScout Family Size = 239, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAATAAGGATCTTGAGATGGGGAGATTATCCTGGATTATCCGGGTGGGCC
CAATGTAATCACAAGGGTCCTTATAAGAGGGAGGCAGGAGG
>rnd-1_family-112#DNA/hAT-Charlie ( RepeatScout Family Size = 237, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTCCAATACGGTAGCCACTAGCCACATGTGGCTATTGAGCACTTGAAAT
GTGGCTAGTGCGACTGAGGAACTGAATTTTATTTTATTTAATTTAATT
>rnd-1_family-50#LINE/L1 ( RepeatScout Family Size = 1039, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTTGACAAAGGTGCCAAGACAATTCAATGGAGAAAGGATAGTCTTTTCAA
CAAATGGTGCTGGGACAACTGGATATCCACATGCAAAA
>rnd-1_family-63#LINE/L1 ( RepeatScout Family Size = 820, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGACCTAAATGTAAGAGCTAAAACTATAAAACTCTTAGAAGAAAACATAG
GAGNAAATCTTCGTGACCTTGGGTTNGGCAATGATTTCTTAGATACGACA
CCAAAAGCACAANCNACAAAAGAAAAAATNGATAAATTGGACTTCATCAA
AATTAAAAACTTCTG
>rnd-1_family-119#SINE/MIR ( RepeatScout Family Size = 219, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGAGGATTAAATGAGTTAATATATGTAAAGCGCTTAGAACAGTGCCTGGC
ACATAGT
>rnd-1_family-49#LINE/L1 ( RepeatScout Family Size = 1052, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ACAAAAGGACAAATACTGTATGATTCCACTTATATGAGGTACCTAGAGTA
GTCAAATTCATAGAGACAGAAAGTAGAATGGTGGTTGCCAGGGGCTGGGG
AGGAGGGGGAATGGGGGAGTTATTGTTTAATGGGTACAGAGTTTCAGTTT
GGGAAGATGAAAAAGTTCTGGAGATGGATGGTGGTGATGGTTGCACAACA
ATGTGAATGTACTTAATGCCACTGAACTGTACACTTAAAAATGGTTAAAA
TGGTAAATTTTATGTTATGTATATTTTACCACAATTAAAAAGAA
>rnd-1_family-146#DNA/hAT-Charlie ( RepeatScout Family Size = 102, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAAAAGAATGTAAAATATCTCATTAATAATTTTTATATTGATTACATGT
TGAAATGATAATATTTTGGATATATTGGGTTAAATAAAATATATTATTAA
AATTAATTTCACCTGTTTCTTTTT
>rnd-1_family-64#LINE/L1 ( RepeatScout Family Size = 808, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGATAAATAAGTCCGGGGATGTAATGTACAGCATGGTGACTATAGTTAA
TAATACTGTATTGTATATTTGAAAGTTGCTAAGAGAGTAGATCTTAAAAG
TTCTCATCACAAGAAAAAAAATTTGTAACTATGTGNGGTGATGGATGTTA
ACTAGACTTATTGTGGTGATCATTTCGCAATATATACAAATAAATCATTA
TGTTGTACACCTGAAACTAATACAATGTTATATGTCAATTATATCTCAAT
AAAA
>rnd-1_family-65#SINE/MIR ( RepeatScout Family Size = 797, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTGTGACCTTGGGCAAGTTACTTAACCTCTCTGAGCCTCGGTTTCCTCA
TCTGTAAAA
>rnd-1_family-22#LINE/L1 ( RepeatScout Family Size = 3168, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAAGAATTGAAAGCAGGGNCTCGAAGAGATATTTGTACACCCATGTTCA
TAGCAGCATTATTCACAATAGCCAAAAGGTGGAAGCAACCCAAGTGTCCA
TCGACGGATGAATGGATAAACAAAATGTGGTATATACATACAATGGAATA
TTATTCAGCCTTAAAAAGGAAGGAAATTCTGACACATGCTACAACATGGA
TGAACCTTGAGGACATTATGCTAAGTGAAATAAGCCAGTCACAAAAGG
>rnd-1_family-46#LINE/L1 ( RepeatScout Family Size = 1136, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAGCAATCTTGAGAAAGAAGAACGGAGCTGGAGGAATCACGCTCCCTGA
CTTCAGACTATACTACAAAGCTACAGTAATCAAGACAGTATGGTACTGGC
ACAAAAACAGACATATAGATCAATGGAACAGAATAGAGAGCCCAGAAAT
>rnd-1_family-130#LTR/ERVL-MaLR ( RepeatScout Family Size = 156, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGCTATGGNCTGAATGTTTGTGTCCCCCCAAAATTCATATGTTGAAATCC
TAAT
>rnd-1_family-93#LINE/L1 ( RepeatScout Family Size = 404, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAACAAAACTCATAGAAAAAGAGATCAGATTTGTGGTTACCAGAGGCGGG
GGGTGGGGGGAGGGGGAATTGGATGAAGGCGGTCAAAAGGTACAAACTTC
CAGTTATAAGATA
>rnd-1_family-94#LINE/L1 ( RepeatScout Family Size = 385, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGATGGCGGAAGAGTAAGACGCGGAGATCACCTTCCTCCCCACAAATAC
ATCAGAAATACATCTACACGTGGAACAACTCCTACAGAACACCTACTGAA
CGCTGGCAGAAGACCTCAGACCTCCCAAAAGGCAAGAAACTCCCCACGTA
CCTGGGTAGGGCAAAAGAAAAAAGAAAAAACAGAGACAAAAGAATAGGGA
CGGGACCTGCACCAGTGGGAGGGAGCTGTGAAGGAGGAAAGGTTTCCACA
CACTAGGAAGCCCCTTCGCGGGCGGAGACTGCGGGTGGCGGAGGGGGAAG
CTTCGGAGCCGCGGAGGAGAGCGCAGCAACAGGGGTGCGGAGGGCAAAGC
GGAGAGATTCCCGCACAGAGGATCGGTGCCGACCGGCACTCACCAGCCCG
AGAGGCTTGTCTGCTCACCCGCCGGGGCGGGCGGGGCTGGGAGCTGAGGC
TCGGGCTTCGGTCGGATCCCAGGGAGAGGACTGGGGTTGGCNGCGTGAAC
ACAGCCTGAAGGGGCTAGTGCGCCACGGCTAGCCGGGAGGGAGTCCGGGA
AAAAGTCTGGANCTGCCGAAGAGGCAAGAGACTTTTTCTTCCCTCTTTGT
TTCCTGGTGCGCGAGGAGAGGGGATTAAGAGCGCCGCTTAAAGGAGCTCC
AGAGACGGGCGCGAGCCGCGGCTATCAGCGCGGACCCCAGAGACGGGCAT
GAGACGCTAAGGCTGCTGCTGCCGCCACCAAGAAGCCTGTGTGCGAGCAC
AGGTCACTATCCACACCTCCCCTCCCGGGAGCCTGTGCAGCCCGCCACTG
CCAGGGTCCCGNGATCCAGGGACAACTTCCCCGGGAGAACGCACGGCGCG
CCTCAGGCTGGTGCAACGTCACGCCGGCCTCTGCCGCCGCAGGCTCGCCC
CGCACTCCGTACCCCTCCCTCCCCCCCGGCCTGAGTGAGCCAGAGCCCCC
GAATCAGCTGCTCCTTTAACCCCGTCCTGTCTGAGCGAAGAACAGACGCC
CTCAGGCGACCTACACGCAGAGGCGGGGCCAAATCCAAAGCTGAACCCCG
GGAGCTGTGCGAACAAAGAAGAGAAAGGGAAATCTCTCCCAGCAGCCTCA
GGAGCAGCGGATTAAATCTCCACAATCAACTTGATGTACCCTGCATCTGT
GGAATACCTGAATAGACAACGAATCATCCCAAATTGAGGAGGTGGACTTT
GGGAGCAAGATATATTATTTTTTCCCCTTTTCCTCTTT
>rnd-1_family-137#LTR/ERV1 ( RepeatScout Family Size = 122, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGAAACCGAGCAGGACCCTGTGGGGCTCCCGGGCACAAAAGCCTTTCCGT
GTCCCCCGTTTCTTGTTTGTAGGAAANAGGCTTCATCAGCCTCCTNGACC
TTCCCTGAGTTCCAAAGGGCAGATTCAAACAGTTGCTAATCAGGGAAGTG
AGGGAATGCAGAAACAAAGGAGGAGCAGTCAAGAAACAATAGTGCAGCCA
TGAGGCAGGGTCCTGGTTCCTCCTCAAGGGATATACATAACAATATCTTT
GAGCTGTTCTGCAGGAACTAAGACCCCACCCAGGTGGAAGANGNTAACTN
CATGCTG
>rnd-1_family-55#LTR/ERVL-MaLR ( RepeatScout Family Size = 921, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGAATGTTTGTGTCCCCCCAAAATTCATATGTTGAAATCCTAACCCCCAA
TGTGATGGTATTAGGAGGTGGGGCCTTTGGGAGGTGATTAGGTCATGAGG
GTGGAGCCCTCATGAATGGGATTAGTGCCCTTATAAAAGAGACCCCAGAG
AGCTCCCTCGCCCCTTCCGCCATGTGAGGACACAGCGAGAAGACGGCCGT
CTGCGAACCAGGAAGCGGGCCCTCACCAGACACCGAATCTGCCGGCGCCT
TGATCTTGGACTTCCCAGCCTCCAGAACTGTGAGAAATAAATNTCTGTTG
TTTATAAGCCACCCAGTCTATGGTATTTTGTTATAGCAGCCCGAACGGAC
TAAGAC
>rnd-1_family-97#LINE/L1 ( RepeatScout Family Size = 381, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTGCTAAGAGAGTAGATCTTAAATGTTCTCACCACAAAAAAGAAATGGTA
ATTATGTGANGTGATGGAGGTGTTAACTAACNCTACGGTGGTAATCATTT
CGCAATATATANATGTATCAAATCANCACGTTGTACACCTTAAACTTACA
CAATGTTATATGTCAATTATATCTCAATAAA
>rnd-1_family-71#LINE/L1 ( RepeatScout Family Size = 684, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATATCCACATGCAAAAGAATGAAATTGGACCCCTACCTNACACCATACAC
AAAAATTAACTCAAAATGGATTAAAGA
>rnd-1_family-60#LTR/ERVL-MaLR ( RepeatScout Family Size = 847, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCATGTGAGGACACAGCGAGAAGGCGGCCGTCTGCAAGCCAGGAAGAGAG
NCCTCACCAGAAACCAANCCTGCCGGCACCTTGATCTTGGACTTCCAGCC
TCCAGAACTGTGAGAAAATAAATTTCTGTTGTTTAAGCCACCCAGTCTGT
GGTATTTTGTTATGGCAGCCCGAGCAGACTAA
>rnd-1_family-72#LTR/ERVL-MaLR ( RepeatScout Family Size = 670, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTGCTGGCTTTGAAGATGGAAGGGGCCACGAGCCAAGGAATGCGGGCGGC
CTCTAGAAGCTGGAAAAGGCAAGGAAACGGATTCTCCCCTAGAGCCTCCA
GAAGGAACGCAGCCCTGCCGACACCTTGATTTTAGCCCAGTGAGACCCAT
TTCGGACTTCTGACCTCCAGAACTGTAAGATAATAAATTTGTGTTGTTTT
A
>rnd-1_family-26#LINE/L1 ( RepeatScout Family Size = 2968, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GAATAAAGACGCAGACGTAGAGAATGGACTTGAGGACACGGGGAGGGGGA
AGGGTAAGCTGGGACGAAGTGAGAGAGTGGCATGGACATATATACACTAC
CAAATGTAAAATAGATAGCTAGTGGGAAGCAGCCGCATAGCACAGGGAGA
TCAGCTCGGTGCTTTGTGACCACCTAGAGGGGTGGGATAGGGAGGGTGGG
AGGGAGACGCAAGAGGGAGGGGATATGGGGATATATGTATACGTATAGCT
GATTCACTTTGTTATACAGCAGAAACTAACACACCATTGTAAAGCAATTA
TACTCCAATAAAGATGT
>rnd-1_family-116#LINE/L1 ( RepeatScout Family Size = 229, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAANGGTAACTATGTGAGGTGATGGATGTGTTAACTAACCTNATTGTGGT
AATCATTTCACAATGTATACGTATATCAAATCATCACGTTGTACACCTTA
AACTTACACAATTTTAT
>rnd-1_family-140#LTR/ERV1 ( RepeatScout Family Size = 115, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCATGTCCTCCGCCTGCCTTTTGTCTGTGGAAAAACTTTAGCCAAAGAAT
AAGTTTAATCAGGGAAGTGAGGGAATGCAGAAACAAAGGAAAACAGTCAA
GCAAGACAAATAACAATAGTTCAGCCATTAAGCAGAGTCAAGGACCTTTA
GTTCCTCCTCAAGGGNTATAGATAACATTCTGAGCCATATCCTTGAGCTG
TTTTGCAGATACTGAAACCCCCACCAGGTGGAAGAAGTTAACTACATGNT
GACCAGACTGTAGCCATGACATAAGCTGCCACAATTCCGAGAACTGGCCT
CAAGGAAATGGGAACAAACCGACCCTGGAACTGAAGACTAACTGTACTTA
AAACAATCAAGATGACGCTGGTCAGACCACGCATGACCAATTTCAAGATG
ACTGTCAGAGCTGACTGTGCTGTTTCTGCATGTAGCCCCCTCCCTCCGCC
TATAAAAGCTCTTGCCCCC
>rnd-1_family-69#LINE/L1 ( RepeatScout Family Size = 712, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAAGGAATGAAGTACTGATACATGCTACAACATGGATGAACCTCGAAAA
CATTATGCTAAGTGAAAGAAGCCAGACACAAAAGA
>rnd-1_family-15#LINE/L1 ( RepeatScout Family Size = 6381, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CATGTAAAAGAATGAAATTAGAACACTCCCTAACACCATACACAAAAATA
AACTCAAAATGGATTAAAGACCTAAATGTAAGACCGGACACTATAAAACT
CTTAGAGGAAAACATAGGCAGAACACTCTTTGACATAAATCGCAGCAANA
TCTTTTTNGATCCGCCTCCTAGAGTAATGGAAATAAAAACAAAAATAAAC
AAATGGGACCTAATNAAACTTAAAAGCTTTTGCACAGCAAAGGAAACCAT
AAACAAAACGAAAAGACAACCCACAGAATGGGAGAAAATATTTGCAAACG
ANGCGACCGACAAGGGATTAATCTCCAAAATATACAAACAGCTCATGCAG
CTCAATATCAAAAAAACAAACAACCCAATCAAAAAATGGGCAGAAGACCT
AAATAGACATTTCTCCAAAGAAGACATACAGATGGCCAANAGGCACATGA
AAAGATGCTCAACATCGCTAATTATTAGAGAAATGCAAATCAAAACTACA
ATGAGGTATCACCTCACACCGGTCAGAATGGCCATCATCAAAAAGTCTAC
AAACAACAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACCCTCCTACACT
GTTGGTGGGAATGTAAATTGGTACAGCCACTATGGAGAACAGTATGGAGG
TTCCTTAAAAAACTAAAAATAGAGCTACCATATGATCCAGCAATCCCACT
CCTGGGCATATATCCGGAGAAAACCATAATTCGAAAAGATACATGCACCC
CAATGTTCATTGCAGCACTATTTACAATAGCCAGGACATGGAAGCAACCT
AAATGTCCATCGACAGATGAATGGATAAAGAAGATGTGGTACATATATAC
AATGGAATATTACTCAGCCATAAAAAAGAACGAAATAATGCCATTTGCAG
CGACGTGGATGGACCTAGAGATTATCATACTGAGTGAAGTAAGTCAGANA
GAGAAAGACAAATATCGTATGATATCACTTATATGTGGAATCTAAAAAAA
TGATACAAATGAACTTATTTACAAAACAGAAACAGACTCACAGACGTAGA
GAACAAACTTATGGTTACCAAGGGGAGAGGGGGGAGGGATAAATTGGGAG
NTTGGGATTGACATATACACACTACTATATATAAAATAGATAACCAACAA
GGCCTACTGTATAGCACAGGGAACTNTACTCAATATCCTGTAATAACCTA
TANGGGAAAAGAATCTGAAAAAAGAATGGATATATGTATATGTATAACTG
AATCACTTTGCTGTACACCNGAAACTAACACAACATTGTAAATCAACTAT
ACTCCAATAAAAATTAAAAATTAAAAAAAAGAAAAAAAAA
>rnd-1_family-133#LINE/L1 ( RepeatScout Family Size = 144, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CTATTCAACATNGTACTGGAAGTCCTAGCCAGNGCAATNAGGCAAGAAAA
A
>rnd-1_family-17#LINE/L1 ( RepeatScout Family Size = 5091, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAGAATGGCCATCATCAAAAAATCTACAAACAATAAATGCTGGAGAGGGT
GTGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAATGTAAATTGATA
CAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAAACTAAAAATAGA
ACTACCATACGACCCAGCAATCCCACTACTGGGCATATACCCTGAGAAAA
CCATAATTCAAAAAGAGTCATGTACCANAATGTTCATTGCAGCTCTATTT
ACAATAGCCAGGACATGGAAGCAACCTAAGTGTCCATCGACGGATGAATG
GATAAAGAAGATGTGGCACATATATACAATGGAATATTACTCAGCCATAA
AAAGAAACGAAATTGAGTTATTTGTAGTGAGGTGGATGGACCTAGAGTCT
GTCATACAGAGTGAAGTAAGTCAGAAAGAGAAAAACAAATACCGTATGCT
AACACATATATATGGAATCTAAAAAAAAAAAAAAAAAAAATGGTCATGAA
GAACCTAGGGGCAAGACGGGAATAAAGACGCAGACCTACTAGAGAATGGA
CTTGAGGATACGGGGAGGGGGAAGGGTAAGCTGGGACAAAGTGAGAGAGT
GGCATGGACATATATACACTACCAAACGTAAAATAGATAGCTAGTGGGAA
GCAGCCGCATAGCACAGGGAGATCAGCTCGGTGCTTTGTGACCACCTAGA
GGGGTGGGATAGGGAGGGTGGGAGGGAGGGAGACGCAAGAGGGAAGAGAT
ATGGGGACATATGTATATGTATAACTGATTCACTTTGTTATAAAGCAGAA
ACTAACACACCATTGTAAAGCAATTATACTCCAATAAAGATGTTAAAAAA
AAAAAAA
>rnd-1_family-103#DNA/hAT-Charlie ( RepeatScout Family Size = 333, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGGGGTCGGCAAACTACGGCCCGCGGGCCAAATCCGGCCCGCCGCCTGTT
TTTGTAAATAAAGTTTTATTGGAACACAGCCACGCCCATTCGTTTACGTA
TTGTCTATGGCTGCTTTCGCGCTACAACGGCAGAGTTGAGTAGTTGCGAC
AGAGACCGTATGGCCCGCAAAGCCTAAAATATTTACTATCTGGCCCTTTA
CAGAAAAAGTTTGCCGACC
>rnd-1_family-104#LINE/L1 ( RepeatScout Family Size = 332, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GACCTTCAAGATGGCGGAGGAGTAAGACGTGGAGATCACCTTCCTCCCCA
CAAATACATCAGAAATACATCTACACGTGGAACAACTCCTACAGAACACC
TACTGAACGCTGGCAGAAGACCTCAGACCTCCCAAAAGGCAAGAAACTCC
CCACGTACCTGGGTAGGGCAAAAGAAAAAAGAAAAAACAGAGACAAAAGA
ATAGGGACGGGACCTGCACCNCTGGGAGGGAGCTGTGAAGGAGGAAAGGT
TTCCACACACTAGGAAGCCCCTTCGCTGGCGGAGACNGGGGGTGGCGGGG
GGGAAGCTTCGGAGCCACGGAGGAGAGCGCAGCAACAGGGGTGCGGAGGG
CAAAGCGGAGAGATTCCCGCACAGAGGATCGGTGCCGACCAGCACTCACC
AGCCCGAGAGGCTTGTCTGCTCACCCGCCGGGGCGGGCGGGGGCTGGGAG
CTGAGGCTCGGGCTTCGGAGGTCGGATCCCAGGGAGAGGACTGGGGTTGG
CTGCGTGAACACAGCCTGAAGGGGCTAGTGCGCCACAGCTAGCCGGGAGG
GAGTCCGGGAAAAAGTCTGGANCTGCCNAAGAGGCAAGAGACCATTGTTT
CGGGGTGCGCGAGGAGAGGGGATTCAGAGCACCGCCTAAACGAGCTCCAG
AGACGGGCGCGAGCCGCGGCTATCAGCGCGGACCCCAGAGACGGGCATGA
GACGCTAAGGCTGCTGCTGCNGCCACCAAGAAGCCTGTGTGCGAGCACAG
GTCACTATCCACA
>rnd-1_family-34#LINE/L1 ( RepeatScout Family Size = 2115, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AATGTTCATAGCAGCACTATTCACAATAGCCAAGACATGGAAACAACCTA
AATGTCCATCAACAGATGAATGGATAAA
>rnd-1_family-57#SINE/MIR ( RepeatScout Family Size = 911, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTTCCTCATCTGTAAAATGGGGATAATAATAGTACCTACCTCATAGGGTT
GTTGTGAGGATTAAATGAGATAA
>rnd-1_family-61#LTR/ERVL-MaLR ( RepeatScout Family Size = 840, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGCCAAGGAACGCCAAGGATTGCCGGCAACCACCAGAAGCTAGGAGAGA
GGCATGGAACGGATTCTCCCTCAGAGCCTTCAGAAGGAACCAACCCTGCC
GACACCTTGATTTCGGACTTCTAGCCTCCAGAACTGTGAGANAATAAATT
TCTGTTGTTTTAAGCCACC
>rnd-1_family-83#SINE/tRNA ( RepeatScout Family Size = 508, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGATCCCGCGTGCCGCAACTAAGACCCGACGCAGCCAAATAAATAAATA
AA
>rnd-1_family-32#LINE/L1 ( RepeatScout Family Size = 2163, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGTCAGACAGAGAAAGACAAATACTGTATGATNTCACTTATATGTGGAAT
CTAAAAAAGCCGAACTCATAGAAACAGAGAGTAGAATGGTGGTTGCCAGG
GGCTGGGGGTGGGGGAAATGGGGAGATGTTGGTCAAAGGGTACAAACTTT
CAGTTATAAGATGAATAAGTTCTG
>rnd-1_family-30#LINE/L1 ( RepeatScout Family Size = 2523, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGGATAAACAAAATGTGGTATATACATACAATGGAATATTATTCAGCCTT
AAAAAGGAAGGAAATTCTGACACATGCTACAACATGGATGAACCTTGAGG
ACATTATGCTAAGTGAAATAAGCCAGTCACAAAA
>rnd-1_family-29#LINE/L1 ( RepeatScout Family Size = 2650, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTCCTCAAAAAATTAAAAATAGAACTACCATATGATCCAGCAATTCCACT
CCTGGGTATATATCCGAAGGAAACGAAAACANTAACTCGAAAAGATACNT
GCACCCCNATGTTCATAGCAGCATTATTCACAATAGCCAAGATATGGAAG
CAACCTAAGTGTCCATCGACGGATGAATGGATAAAGAAGATGTGGTATAT
A
>rnd-1_family-8#SINE/tRNA ( RepeatScout Family Size = 8389, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGCTTCCCTGGTGGCGCAGTGGTTGAGAATCTGCCTGCTAATGCAGGGG
ACACGGGTTCGAGCCCTGGTCTGGGAGGATCCCACATGCCGCGGAGCAAC
TAGGCCCGTGAGCCACAACTACTGAGCCTGCGCGTCTGGAGCCTGTGCTC
CGCAACAAGAGAGGCCGCGATAGTGAGAGGCCCGCGCACCGCGATGAAGA
GTGGCCCCCGCTTGCCACAACTAGAGAAAGCCCTCGCACAGAAACGAAGA
CCCAACACAGCAAAAATAAATAAATTAATTAATAAACTCCTACCCCCAAC
ATCTTAAAAAAAAAAAAAAAA
>rnd-1_family-118#LTR/ERVL-MaLR ( RepeatScout Family Size = 220, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCTCCAGCCCCAGTCGAGCCTTCAGATGACTGCAGCCCCGGCCGACACCT
TGACTGCAGCCTCGTGAGAGACCCTGAGCCAGAACCACCCAGCTAAGCCG
CTCCCGGATTCCTGACCCACAGAAACTGTGAGATAATAAATG
>rnd-1_family-147#DNA/TcMar-Tigger ( RepeatScout Family Size = 101, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTTATATAAGGGACTTGAGCATCCGCGGATTTTGGTATCCGCGGGGGTCC
TGGAACCAATCCCCCGCGGATACCGAGGGACGACTGTA
>rnd-1_family-47#LINE/L1 ( RepeatScout Family Size = 1107, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAAAAGACACTGTTAAGAGAATGAAAAGACAAGCCACAGACTGGGAGAAA
ATATTTGCAAATCATATATCTGATAAAGGACTNGTATCCAGAATATA
>rnd-1_family-129#LTR/ERVL ( RepeatScout Family Size = 173, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTGATGGTTAATTTTATGTGTCAACTTGACTGGGCCACGGGGTGCCCAG
ATATTTGGTCAAACATTATTCTGGGTGTGTCTGTGAGGGTGTTTCTGGAT
GAGATTAACATTTGAATCGGTAGACTGAGTAAAGCAGATTGCCCTCCCCA
ATGTGGGTGGGCCTCATCCAATCNGTTGAAGGCCTGAATAGAACAAAAAG
GCTGAGGAAGAGGGAATTCCTCCTGCCTG
>rnd-1_family-117#DNA/hAT-Charlie ( RepeatScout Family Size = 227, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTTGCCCCCCAGGGGACATTTGGCAATGTCTGGAGACATTTTTGGTTGTC
ACAACTGGGGGAAGGGGTGCTACTGGCATCTAGTGGGTAGAGGCCAGGGA
TGCTGCTAAACATCCTACAATGCACAGGACAGCCCCCACAACAAAGAATT
ATCCGGCCCAAAATGTCAATAGTGCCGAGGTTGAGAAACCCTG
>rnd-1_family-48#SINE/tRNA ( RepeatScout Family Size = 1063, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGCCCGCGCGCAGCAACGAAGACCCAACGCAGCCAAAAATAAAATAAAT
TTATTTAAAAAAAAAAAGATAAGAAAATA
>rnd-1_family-100#LINE/L1 ( RepeatScout Family Size = 361, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGAAAATATTTGCAAANCACATATCTGATAAAGGACTNGTATCCAGAATA
TATAAAGAACTCTCAAAAC
>rnd-1_family-108#LINE/L1 ( RepeatScout Family Size = 261, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTGATTGTGGTGATGGTTNCACGGNTGTGTATATACTAAAAACCATCGAA
TTGTACACTTTAAATATGTGCANTTTATTGTATGTNAATTATACCTCAAT
AAAGCTGTTATTAAAAAAAA
>rnd-1_family-122#LINE/L1 ( RepeatScout Family Size = 200, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TCTTCCTCCCAAAACCCATAACCCCAGTCTAATCATGAGAAAAACATCAG
ACAAACCCAAACTGAGGGACATTCTACAAAATACCTGACCAGTACTCCTC
AAAACTGTCAAGGTCATCAAAAACAAGGAAAGTCTGAGAAACTGTCACAG
CCGAGAGGAGCCTAAGGAGACATGACGACTAAATGTAATGTATCCTGGAT
GGGATCCTGGAACAGAAAAAGGACATTAGGNAAAAACTAAGGAAATCTGA
ATAAAGTATGGACTTTAGTTAATAATAATGTATCAATATTGGTTCATTAA
TTGTGACAAATGT
>rnd-1_family-145#LINE/L1 ( RepeatScout Family Size = 103, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAGGAACCAGGGCTCCTTGGAGAAATGGCTGATTCCAGGGCTGGGGCAGG
GAANATACAAGATGAGCCTGGAACATCTTGTNGTGCCAGAAAGTAAGGAA
GT
>rnd-1_family-24#LINE/L1 ( RepeatScout Family Size = 3081, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAGATACATGCACCCCAATGTTCATTGCAGCACTATTTACAATAGCCAA
GACATGGAAGCAACCTAAATGTCCATCGACAGATGAATGGATAAAGAAGA
TGTGGTACATATATACAATGGAATATTACTCAGCCATAAAAAAGAATGAA
ATAATGCCATTTGCAGCAACATGGATGGACCTAGAGATTATCATACTAAG
TGAAGTAAGTCAGACAGAGAAAGACAAATATCATATGATATCACTTATAT
GTGGAATCTAAAAAAATGATACAAATGAACTTATTTACAAAACAGAAACA
GACTCACAGACNTAGAAAACAAACTTATGGTTACCAAAGGGGAAAGGTGG
GGGGGAGGGATAAATTAGGAGNTTGGGATTAACATATACACACTACTATA
TATAAAATAGATAACCAACAAGGACCTACTGTATAGCACAGGGAACTCTA
CTCAATATTCTGTAATAACCTATATGGGAAAAGAATCTGAAAAAGAATGG
ATATATGTATATGTATAACTGAATCACTTTGCTGTACACCTGAAACTAAC
ACAACATTGTAAATCAACTATACTCCAATATAAAATAAAA
>rnd-1_family-38#LINE/L1 ( RepeatScout Family Size = 1530, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GAGGAATGGATAAAGAAGATGTGGTACATATATACAATGGAATATTACTC
AGCCATAAAAAAGAATGAAATAATGCCATTTGCAGCAACATGGATGGACC
TAGAGATTATCATACTAAGTGAAGTAAGTCAGACAGAGAAAGACAAATAT
CATATGATATCACTTATACGTGGAATCTAAAAAANATGATACAAATGAAC
TTATTTACAAAACAGAAACAGACTCACAGACNTAGAAAACAAACTTATGG
TTACCAAAGGGGAAAGGTGAGGGGGGAGGGATAAATTAGGAGNTTGGGAT
TAACANATACACACTACTATATATAAAATAGATAACCAACAAGGACCTAC
TGCATNGCNCAGNGAANTGNACTCAACACCCCGTAATAAAC
>rnd-1_family-113#LINE/L1 ( RepeatScout Family Size = 235, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAAGAAAAAACAGAGACAAAAGAATAGGGACGGGACCTGCACCNCTGGG
AGGGAGCTGTGAAGGAGGAAAGGTTTCCACACACTAGGAAGCCCCTTCGC
TGGCGGAGACNGCGGGTGGCGGAGGGGGGAAGCTTCGGAGCCACGGAGGA
GAGCGCAGCAACAGGGGTGCGGAGGGCAAAGCGGAGAGATTCCCGCACAG
AGGATCGGTGCCGACCAGCACTCACCAGCCCGAGAGGCTTGTCTGCTCAC
CCGCCGGGGCGGGCGGGGGCTGGGAGCTGAGGCTCGGGCTTCGGAGGTCG
GATCCCAGGGAGAGGACTGGGGTTGGCTGCGTGAACACAGCCTGAAGGGG
GCTAGTGCGCCACAGCTAGCCGGGAGGGAGTCCGGGAAAAAGTCTGGANC
TGCCTAAGAGGCAAGAGACCATTGTTTCGGGGTGCGCGAGGAGAGGGGAT
TC
>rnd-1_family-53#LTR/ERVL-MaLR ( RepeatScout Family Size = 987, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GACTTCTGGCCTCCAGAACTGTGAGAGAATAAATTTNTGTTGTTTTAAGC
CACCAAGTTTGTGGTAATTTGTTACAGCAGCCATAGGAAACTAATACA
>rnd-1_family-75#LTR/ERVL-MaLR ( RepeatScout Family Size = 618, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTATGGGTTGAATTGTGTCCCCCCAAAATTCATATGTTGAAGTCCTAACC
CCCAGTACCTCAGAATGTGACCTTATTTGGAAATAGGGTCTTTGCAGATG
TAATTATTAAGTTAAGATGAGGTCAT
>rnd-1_family-11#SINE/tRNA ( RepeatScout Family Size = 8168, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGAATTCCCTGGCGGTCCAGTGGTTAGGACTCCGCGCTTCCACTGCAGG
GGGCNCGGGTTCGATCCCTGGTCGGGGAACTAAGATCCCGCAAGCCGCGC
GGCGCGGCCAAAAAAAAAAAAAAAAAAAA
>rnd-1_family-51#LTR/ERVL-MaLR ( RepeatScout Family Size = 1031, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ACACAGAAGAAGAAGATGTGAAGACGGAGGCAGAGATTGGAGTGATGCGG
CCACAAGCCAAGGAACGCCTGGGGCCACCAGAAGCTGGAAGAGGCAGGAA
GGATTCTCCCCTAGAGCCTCCGGAGGGAGCGCGGCCCTGCCGACACCTTG
ATTTCGGACTTCTGGCCTCCAGAACTGTGAGAGAATAAATTTCTGTTGTT
TTAAGCCACCCAGTTTGTGGTANTTTGTTACGGCAGCCCTAGGAAACTA
>rnd-1_family-5#SINE/tRNA ( RepeatScout Family Size = 8432, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGACTTCCCTGGCGGTCCAGTGGTTAAGACTCCGCGCTTCCANTGCAGG
GGGCGCGGGTTCGATCCCTGGTCGGGGAACTAAGATCCCGCATGCCGCGC
GGCGCGGCCAAAAAAAAAAAAAAAAAA
>rnd-1_family-142#LTR/ERVL ( RepeatScout Family Size = 113, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCTTCCCCCANACCTCGCCCTATGCATCTCTTCCATCTGGCTGTTCCTGA
GTTGTATCCTTTTATAATAAACCGGTAATCTAGTAAGTAAAGTGTTTCCC
TGAGTTCTGTGAGCCGCTCTAGCAAATTAATCGAACCCGAGGAGGGGGTG
TGGGAACCTCCGATTTATAGCCGGTCGGTCAGAAGCGCGGGTGACGACCT
GGGCTTGCGACTGGCGTCTGAA
>rnd-1_family-21#LINE/L1 ( RepeatScout Family Size = 3365, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AATGGAATACTACTCAGCCATAAAAAAGAATGAAATTTTGCCATTTGCAA
CAACATGGATGGACCTGGAGGGTATTATGCTNAGTGAAATAAGTCAGACA
GAGAAAGACAAATACTGTATGNTATCACTTATATGTGGAATCTAAAAAAA
TAAAACAAACTAGTGAATATAACAAAANAGAAACAGACTCACAGATATAG
AGAACAAACTAGTGGTTACCAGTGGGGAGAGGGAAGGGGGGAGGGGCAAG
ATAGGGGTAGGGGATTAAGAGGTACAAACTACTATGTATAAAATAAATAA
GCTACAAGGATATATTGTACAGCACAGGGAATATAGCCAATATTTTATAA
TAACTNTAAATGGAGTATAACCTNTAAAAATTNTGAATCACTATGTTGTA
CACCTGAAACTAATATAATATTGTAAATCAACTATACTTCAATAAAAAA
>rnd-1_family-86#LINE/L1 ( RepeatScout Family Size = 489, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATACATATCGATAATTACCTTAAATGTAAATGGATTAAATGCTCCAACCA
AAAGACACAGACTGGCTGAATGGATACAAAA
>rnd-1_family-68#LINE/L1 ( RepeatScout Family Size = 742, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAACTACTAGAGCTAATCAATGAATTCGGTAAAGTTGCAGGATACAAAA
TTAATATACAGAAATCTGTTGCATTTCTATACACTAACAATGAANNATCA
GAAAGAGAAATTAAGGAAACAATCCCATTTACNATCGCATCAAAAAGAAT
AAAATACCTA
>rnd-1_family-125#DNA/TcMar-Mariner ( RepeatScout Family Size = 184, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TATTGGGTTGGCCAAAAAGTTCGTTCGGGTTTTTCCGTAAGATGTTACGG
AAAAACCCGAACGAACTTTTTGGCCAACCCAATA
>rnd-1_family-2#SINE/tRNA ( RepeatScout Family Size = 11172, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGCTTCCCTGGTGGCGCAGTGGTTAAGAATCCGCCTGCCAATGCAGGGG
ACACGGGTTCGAGCCCTGGTCCGGGAAGATCCCACATGCCGCGGAGCAAC
TAAGCCCGTGCGCCACAACTACTGAGCCTGCGCTCTAGAGCCCGCGAGCC
ACAACTACTGAGCCCGCGTGCCACAACTACTGAAGCCCGCGCGCCTAGAG
CCCGTGCTCCGCAACAAGAGAAGCCACCGCAATGAGAAGCCCGCGCACCG
CAACGAAGAGTAGCCCCCGCTCGCCGCAACTAGAGAAAGCCCGCGCGCAG
CAACGAAGACCCAACGCAGCCAAAAATAAATAAATAAAATTAAAAAAAAA
AAAAA
>rnd-1_family-106#LINE/L1 ( RepeatScout Family Size = 300, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGTGCGCGAGGAGAGGGGATTCAGAGCGCCGCCTAAACGAGCTCCAGAGA
CGGGCGCGAGCCGCGGCTATCAGCGCGGACCCCAGAGACGGGCATGAGAC
GCTAAGGCTGCTGCTGCNGCCACCAAGAAGCCTGTGTGCGAGCACAGGTC
ACTATCCACACCTCCCCTCCCGGGAGCCTGTGCAGCCCGCCACTGCCAGG
GTCCCGTGATCCAGGGACAACTTCCCCGGGAGAACGCACGGCGCGCCTCA
GGCTGGTGCAACGTCACGCCGGCCTCTGCCGCCGCAGGCTCGCCCCGCAT
TCCGTACCCCTCCCTCCCCCCGGCCTGAGTGAGCCAGAGCCCCCGAATCA
GCTGCTCCTTTAACCCCGTCCTGTCTGAGCGAAGAACAGACGCCCTCAGG
CGACCTACACGCAGAGGCGGGGCCAAATCCAAAGCTGAACCCCGGGAGCT
GTGCGAACAAAGAAGAGAAAGGGAAATCTCTCCCAGCAGCCTCAGGAGCA
GCGGATTAAATCTCCACAATCAACTTGATGTACCCTGCATCTGTGGAATA
CCTGAATAGACAACGAATCATCCCAAAATTGAGGCGGTGGACTTTGGGAG
CAACTGTAGACTTGGGGTTTGCTTTCTGCGTCTAATTTGTTTCTGGTTTT
ATGTTTATCTTAGTTTAGTNTTTAGAGCTTGTTATCATTGGTGGATTTGT
TTATTGGTTTGGTTGCTCTCTTCCTTTTTATTTTATATATATTTTTTTTT
TTTCCTTTTTCTCTTTTTGTGAGTGTGTATGTGTATGCTTCTTTGTGTGA
TTTTGTCTGTATAGCTTTGCTTTTACCATTTGTCCTAGGGTTCTGTCTTT
TTTTTTTAANTATAGTTTTTAGCGCTTGTTATCATTGGTGGATTTGTTTT
TTGGTTTGGTTGCTCTCTTCTTTCTTTCTTTCTTTTTTTTTAACTTTTTT
ATTTTTAATAATTTTTTTTTATTTTAATAACTTTATTTTATTTTTTCCTT
TTTTCTTTCTTTTTCTTTTTTTCTCCCTTTTCTTCT
>rnd-1_family-54#LINE/L1 ( RepeatScout Family Size = 950, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAGCGTGGGGAATATAGTCAATAATNNTGTAATANCTTTGTATGGTGACA
GATGGTAACTAGACTTATCGTGGTGATCATTTCGNAATGTATANAAATAT
CGAATCACTATGTTGTACACCTGAAACTAACATAGTGTTGTANGTCAATT
ATACTTCAAAAACAAA
>rnd-1_family-143#LINE/L1 ( RepeatScout Family Size = 109, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CCCAGATCTTGGTTTCTAAATACCATTCTCCANTAAAAGGAACCAGGGCT
CCTTGGAGAAATGGCTGATTCCAGGGCTGGGGCAGGGAANATACAAGATG
AGCCTGG
>rnd-1_family-109#LINE/L1 ( RepeatScout Family Size = 250, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGAAACTGGGTGAAGGGTATATGGGAACTCTCTGTACTATCTTTGCAACT
TTTCTGTAAATCTAAAATTATTTCAAAATAAAAAGTT
>rnd-1_family-43#LINE/L1 ( RepeatScout Family Size = 1350, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAACATTATGCTAAGTGAAAGAAGCCAGNCACAAAAGGCCACATATTGTA
TGATTCCATTTATATGAAATGTCCAGAATAGGCAAATCCATAGAGACAGA
AAGTAGATTAGTGGTTGCCNGGGGCTGGGGAGAATGGGGGAGATGGGGAG
TGACTGCTAATGGGTACGGGGTTTCTTTTTGGGGTGATGAAAATGTTCTA
AAATTAGATNGTGGTGATGGTTGCACAACTCTGTGAATATACTAAAAACC
ACTGAATTGTACACTTTAAATGGGTGAATTTTATGGTATGTGAATTATAT
CTCAATAA
>rnd-1_family-139#LTR/ERV1 ( RepeatScout Family Size = 116, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAGAATAAGTTTAATCAGGGAAGTGAGGGAATGCAGAAACAAAGGAAAA
CAGTCAAACAAGACAAATAACAATAGTTCAGCCATTAAGCAGAGTCAAGG
ACCTTTAGTTCCTCCTCAAGGGNTATAGATAACATTCTGAGCCATATCCT
TGAGCTGTTTTGCAGATACTGAAACCCCCACCAGGTGGAAGAAGTTAACT
ACATGNTGACCAGACTGTAGCCATGACATAAGCTGCCACAATTCCGAGAA
CTGGCCTCAAGGAAATGGGAACAAACCGACCCTGGAACTGAAGACTAACT
GTACTTAAAACAATCAAGATGACGCTGGTCAGACCACGCATGACCAATTT
CAAGATGACTGTCAGAGCTGACTGTGCTGTTTCTGCATGTAGCCCCCTCC
CTCCGCCTATAAAAGCTCTTGCCCACTGATTGTCAGCGGGGGGAGTCGGC
CTTTGGACAGGAGTCCGCCCTCCCCCC
>rnd-1_family-91#LTR/ERVL-MaLR ( RepeatScout Family Size = 428, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGGGCTGAATTGTGTCCCCCCAAAATTCATATGTTGAAGTCCTAACCCC
CAGTACCTCAGAATGTGACCGTATTTGGAGATA
>rnd-1_family-10#SINE/tRNA ( RepeatScout Family Size = 8365, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGCTTCCCTGGTGGCGCAGTGGTTGAGAGTCCGCCTGCCGATGCAGGGGA
CACGGGTTCGTGCCCCGGTCCGGGAAGATCCCACATGCCGCGGAGCGGCT
GGGCCCGTGAGCCATGGCCGCTGAGCCTGCGCGTCCGGAGCCTGTGCTCC
GCAACGGGAGAGGCCACAACAGTGAGAGGCCCGCGTACCGCAAAAAAAAA
AAAAAAAAAAAAAA
>rnd-1_family-16#LINE/L1 ( RepeatScout Family Size = 5574, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAAGAAATAAAAGGAATACAAATTGGAAAAGAAGAAGTAAAACTGTCAC
TGTTTGCAGATGACATGATACTATACATAGAGAATCCTAAAGATGCCACC
AGAAAACTACTAGAGCTAATCAATGAATTTGGTAAAGTTGCAGGATACAA
AATTAATGCACAGAAATCTCTTGCATTCCTATACACTAACGATGAAAAAT
CTGAAAGAGAAATTAAGGAAACACTCCCATTTACCATTGCAACAAAAAGA
ATAAAATACCTAGGAATAAACCTACCTAGGGAGACAAAAGACCTGTACGC
AGAAAACTATAAGACACTGATGAAAGAAATTAAAGATGATACAAACAGAT
GGAGAGATATACCATGTTCTTGGATTGGAAGAATCAATATTGTGAAAATG
ACTATACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAATT
ACCAATGGCATTTTTTACAGAACTAGAACAAAAAATCTTAAAATTTGTAT
GGAGACACAAAAGACCCCGAATAGCCAAAGCAGTCTTGAGGGAAAAAAAC
GGAGCTGGAGGAATCAGACTCCCTGACTTCAGACTATACTACAAAGCTAC
AGTAATCAAGACAATATGGTACTGGCACAAAAACAGAAATATAGATCAAT
GGAACAGGATAGAAAGCCCAGAGATAAACCCACGCACCTATGGTCAACTA
ATCTATGACAAAGGAGGCAAGGATATACAATGGAGAAAAGACAGTCTCTT
CAATAAGTGGTGCTGGGAAAACTGGACAGCTACATGTAAAAGAATGAAAT
TAGAACACTCCCTAACACCATACACAAAAATAAACTCAAAATGGATTAAA
GACCTAAATGTAAGACCGGACACTATAAAACTCTTAGAGGAAAACATAGG
AAGAACACTCTTTGACATAAATCACAGCAAGATCTTTTTTGACCCACCTC
CTAGAGTAATGGAAATAAAAACAAAAATAAACAAATGGGACCTAATGAAA
CTTAAAAGCTTTTGCACAGCAAAGGAAACCATAAACAAGACGAAAAGACA
ACCCTCAGAATGGGAGAAAATATTTGCAAACGAATCAACGGACAAAGGAT
TAATCTCCAAAATATATAAACAGCTCATGCAGCTCAATATTAAAAAAACA
AACAACCCAATCCAAAAATGGGCAGAAGACCTAAATAGACATTTCTCCAA
AGAAGACATACAGATGGCCAAGAAGCACATGAAAAGCTGCTCAACATCAC
TAATTATTAGAGAAATGCAAATCAAAACTACAATGAGGTATCACCTCACA
CCAGTTAGAATGGGCATCATCAGAAAATCTACAAACAACAAATGCTGGAG
AGGGTGTGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAATGTAAAT
TGATACAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAAACTAAAA
ATAGAATTACCATATGACCCAGCAATCCCACTACTGGGCATATACCCAGA
GAAAACCATAATTCAAAAAGACACATGCACCCCAATGTTCATTGCAGCAC
TATTTACAATAGCCAGGTCATGGAAGCAACCTAAATGCCCATCGACAGAC
GAATGGATAAAGAAGATGTGGTACATATATACAATGGAATATTACTCAGC
CATAAAAAGGAACGAAATTGGGTCATTTGTAGAGACGTGGATGGACCTAG
AGACTGTCATACAGAGTGAAGTAAGTCAGAAAGAGAAAAACAAATATCGT
ATATTAACGCATATATGTGGAACCTAGAGANTGTCGTACAGAGTGAACGT
GTAAGTCAGAAAGAGAAAAACAAATATCGTATATTAACGCATATATGTGG
AACCTAGAAAAATGGTACAGATGAACCGGTTTGCAGGGCAGAAATAGAGA
CACAGATGTAGAGAACAAACGTATGGACACCAAGGGGGGAAAGCGGCGGG
GGGTGGGGGTGGTGGTGTGATGAATTGGGAGATTGGGATTGACATGTATA
CACTAATATGTATAAAATAGATAACTAATAAGAACCTGCTGTATAAAAAA
ATAAATAAAATTAAATTAAAAAAAAAA
>rnd-1_family-19#LINE/L1 ( RepeatScout Family Size = 4110, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAATCAAAACTACAATGAGGTATCACCTCACACCAGTTAGAATGGGCATC
ATCAGAAAATCTACAAACAACAAATGCTGGAGAGGGTGTGGAGAAAAGGG
AACCCTCTTGCACTGTTGGTGGGAATGTAAATTGATACAGCCACTATGGA
GAACAGTATGGAGGTTCCTTAAAAAACTAAAAATAGAATTACCATATGAC
CCAGCAATCCCACTACTGGGCATATACCCAGAGAAAACCATAATTCAAAA
AGACACATGCACCCCAATGTTCATTGCAGCACTATTTACAATAGCCAGGT
CATGGAAGCAACCTAAATGCCCATCGACAGACTGAATGGATAAAGAAGAT
GTGGTACATATATACAATGGAATATTACTCAGCCATAAAAAGGAACGAAA
TTGGGTCATTTGTAGAGACGTGGATGGATCTAGAGACTGTCATACAGAGT
GAAGTAAGTCAGAAAGAGAAAAACAAATATCGTATATTAACGCATATATG
TGGAACCTAGAAAAATGGTACAGATGAACCGGTTTGCAGGGCAGAAATNG
AGACACAGATGTAGAGAACAAACGTATGGACACCAAGGGGGGAAAGCGGC
GGGGGTGGGGTGGTGGTGTGATGAATTGGGAGATTGGGATTGACATGTAT
ACACTGATGTGTATAAAATGGATGACTAATAAGAACCTGCTGTATAAAAA
AATAAATAAAATAAAATTCAAAAAAA
>rnd-1_family-14#LINE/L1 ( RepeatScout Family Size = 6484, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TTTTTGTTTTTTTTCTTAATAATTTTTTTTCTTAATAATTCTTTTTTATT
TTAATAACTTTTTATTTTATCTTACTTTTTATTTTATCCTTTTTCTTTNT
TTCATTTCTCCTTCCTCTTTCCTTTCTTTCTTTCTATTTTTTCTCCCTTT
TNTTCTGAGCCGTGTGGCTGACAGGGTCTTGGTGCTCCGGCCGGGCGTCA
GGCCTGTGCCTCTGAGGTGGGAGAGCCGAGTTCAGGACACTGGTCCACCA
GAGACCTCCCGGCTCCACGTAATATCAAACGGCGAAAGCTCTCCCAGAGA
TCTCCATCTCAACGCTAAGACCCAGCTCCACTCAACGACCAGCAAGCTAC
AGTGCTGGACACCCCATGCCAAACAACTAGCAAGACAGGAACACAACCCC
ACCCATTAGCAGAGAGGCTGCCTAAAATCATAATAAGNTCACAGACACCC
CAAAACACACCACCGGACGCGGNCCTGCCCACCAGAAAGACAAGATCCAG
CCTCATCCACCAGAACACAGGCACCAGTCCCCTCCACCAGGAAGCCTACA
CAACCCACTGAACCAACCTTAGCCACTGGGGGCAGACACCAAAAACAACG
GGAACTACGAACCTGCAGCCTGCGAAAAGGAGACCCCAAACACAGTAAGN
TAAGCAAAATGAGAAGACAGAGAAACACGCAGCAGATGAAGGAGCAAGGT
AAAAACCCACCAGACCAAACAAATGAAGAGGAAATAGGCAGTCTACCTGA
AAAAGAATTCAGAGTAATGATAGTAAAGATGATCCAAAATCTTGGAAATA
GAATGGAGAAAATACAAGAAACGTTTAACAAGGACCTAGAAGAACTAAAG
AGCAAACAAACAATGATGAACAACACAATAAATGAAATTAAAAATTCTCT
AGAAGGAATCAATAGCAGAATAACTGAGGCAGAAGAACGGATAAGTGACC
TGGAAGATAAAATAGTGGAAATAACTACCGCAGAGCAGAATAAAGAAAAA
AGAATGAAAAGAATTGAGGACAGTCTCAGAGACCTCTGGGACAACATTAA
ACGCACCAACATTCGAATTATAGGGGTCCCAGAAGAAGAAGAGAAAAAGA
AAGGGACTGAGAAAATATTTGAAGAGATTATAGTTGAAAACTTCCCTAAT
ATGGGAAAGGAAATAGTCAATCAAGTCCAGGAAGCGCAGAGAGTCCCATA
CAGGATAAATCCAAGGAGAAACACGCCAAGACACATATTAATCAAACTAT
CAAAAATTAAATACAAAGAAAAAATATTAAAAGCAGCAAGGGAAAAATAA
CATACAAGGGAATCCCCATAAGGTTAACAGCTGATCTTTCAGCAGAAACT
CTGCAAGCCAGAAGGGAGTGGCAGGACATATTTAAAGTGATGAAAGGGAA
AAACCTACAACCAAGATTACTCTACCCAGCAAGGATCTCATTCAGATTCG
ACGGAGAAATTAAAACCTTTACAGACAAGCAAAAGCTAAGAGAATTCAGC
ACCACCAAACCAGCTTTACAACAAATGCTAAAGGAACTTCTCTAGGCAGG
AAACACAAGAGAAGGAAAAGACCTACAATAACAAACCCAAAACAATTAAG
AAAATGGTAATAGGAACATACATATCGATAATTACCTTAAATGTAAATGG
ATTAAATGCTCCAACCAAAAGACACAGACTGGCTGAATGGATACAAAAAC
AAGACCCGTATATATGCTGTCTACAAGAGACCCACTTCAGACCTAGGGAC
ACATACAGACTGAAAGTGAGGGGATGGAAAAAGATATTCCATGCAAATGG
AAATCAAAAGAAAGCTGGAGTAGCAATTCTCATATCAGACAAAATAGACT
TTAAAATAAAGACTATTACAAGAGACAAAGAAGGACACTACATAATGATC
AAGGGATCAATCCAAGAAGAAGATATAACAATTGTAAATATTTATGCACC
CAACATAGGAGCACCTCAATACATAAGGCAAATGCTAACAGCCATAAAAG
GGGAAATCGACAGTAACACAATCATAGTAGGGGACTTTAACACCCCACTT
TCACCAATGGACAGATCATCCAAAATGAAAATAAATAAGGAAACACAAGC
TTTAAATGATACATTAAACAAGATGGACTTAATTGATATTTATAGGACAT
TCCATCCAAAAACAACAGAATACACTTTCTTCTCAAGTGCTCATGGAACA
TTCTCCAGGATAGATCATATCTTGGGTCACAAATCAAGCCTCGGTAAATT
TAAGAAAATTGAAATCGTATCAAGTATCTTTTCCGACCACAACGCTATGA
GACTAGATATCAATTACAGGAAAAAANCTGTAAAAAATACAAACACATGG
AGGCTAAACAATACACTACTNAATAACCAAGAGATCACTGAAGAAATCAA
AGAGGAAATCAAAAAATACCTAGAAACAAATGACAATGAAAACACGACGA
CCCAAAACCTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATA
GCAATACAATCCTACCTCAAGAAACAAGAAACATCTCAAATAAACAACCT
AACCTTACACCTAAAGCAATTAGAGAAAGAAGAACAAAAAAACCCCAAAG
TTAGCAGAAGGAAAGAAATCATAAAGATCAGATCAGAAATAAATGAAAAA
GAAATGAAGGAAACGATAGCAAAGATCAATAAAACTAAAAGCTGGTTCTT
TGAGAAGATAAACAAAATTGATAAACCATTAGCCAGACTCATCAAGAAAA
AAAGGGAGAAGACTCAAATCAATAGAATTAGAAATGAAAAAGGAGAAGTA
ACAACTGACACTGCAGAAATACAAAGGATCATGAGAGATTACTACAAGCA
ACTCTATGCCAATAAAATGGACAACCTGGAAGAAATGGACAAATTCTTAG
AAANGCACAACCTTCCGAGACTGAACCAGGAAGAAATAGAAAATATGAAC
AGACCAATCACAAGCACTGAAATTGAAACTGTGATTAAAAATCTTCCAAC
AAACAAAAGCCCAGGACCAGATGGCTTCACAGGCGAATTCTATCAAACAT
TTAGAGAAGAGCTAACACCTATCCTTCTCAAACTCTTCCAAAATATAGCA
GAGGGAGGAACACTCCCAAACTCATTCTACGAGGCCACCATCACCCTGAT
ACCAAAACCAGACAAAGATGTCACAAAGAAAGAAAACTACAGGCCAATAT
CACTGATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCAAACAGA
ATCCAACAGCACATTAAAAGGATCATACACCATGATCAAGTGGGGTTTAT
CCCAGGAATGCAAGGATTCTTCAATATACGCAAATCAATCAATGTGATAC
ACCATATTAACAAATTGAAGGAGAAAAACCATATGATCATCTCAATAGAT
GCAGAAAAAGCTTTCGACAAAATTCAACACCCATTTATGATAAAAACCCT
CCAGAAAGTAGGCATAGAGGGAACTTACCTCAACATAATAAAGGCCATAT
ATGACAAACCCACAGCCAACATCGTTCTCAATGGTGAAAAACTGAAACCA
TTTCCACTAAGATCAGGAACAAGACAAGGTTGCCCACTCTCACCACTATT
ATTCAACATAGTTTTGGAAGTTTTAGCCACAGCAATCAGAGAAGAAAAAG
AAATAAAAGGAATCCAAATCGGAAAAGAAGAAGTAAAGCTGTCACTGTTT
GCAGATGACATGATACTATACATAGAGAATCCTAAAGATGCTACCAGAAA
ACTACTAGAGCTAATCAATGAATTTGGTAAAGTAGCAGGATACAAAATTA
ATGCACAGAAATCTCTTGCATTCCTATACACTAATGATGAAAAATCTGAA
AGAGAAATTAAGGAAACACTCCCATTTACCATTGCAACAAAAAGAATAAA
ATACCTAGGAATAAACCTACCTAAGGAGACAAAAGACCTGTATGCAGAAA
ACTATAAGACACTGATGAAAGAAATTAAAGATGATACAAACAGATGGAGA
GATATACCATGTTCTTGGATTGGAAGAATCAACATTGTGAAAATGACTAT
ACTACCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAACTACCAA
TGGCATTTTTCACAGAACTAGAACAAAAAATTTCACAATTTGTATGGAAA
CACAAAAGACCCCGAATAGCCAAAGCAATCTTGAGAAAGAAAAACGGAGC
TGGAGGAATCAGGCTCCCTGACTTCAGACTATACTACAAAGCTACAGTAA
TCAAGACAGTATGGTACTGGCACAAAAACAGAAATATAGATCAATGGAAC
AGGATAGAAAGCCCAGAGATAAACCCACGCACATATGGTCACCTTATCTT
TGATAAAGGAGGCAAGAATATACAATGGAGAAAAGACAGCCTCTTCAATA
AGTGGTGCTGGGAAAACTGGACAGCTACATGTAAAAGAATGAAATTAGAA
CACTCCCTAACACCATACACAAAAATAAACTCAAAATGGATTAAAGACCT
AAATGTAAGGCCAGACACTATCAAACTCTTAGAGGAAAACATAGGCAGAA
CACTCTATGACATAAATCACAGCAAGATCCTTTTTGACCCACCTCCTAGA
GAAATGGAAATAAAAACAAAAATAAACAAATGGGACCTAATGAAACTTAA
AAGCTTTTGCACAGCAAAGGAAACCATAAACAAGACGAAAAGACAACCCT
CAGAATGGGAGAAAATATTTGCAAATGAAGCAACTGACAAAGGATTAATC
TCCAAAATNTACAAGCAGCTCATGCAGCTCAATATCAAAAAAACAAACAA
CCCAATCCAAAAATGGGCAGAAGACCTAAATAGACATTTCTCCAAAGAAG
ATATACAGATTGCCAACAAACACATGAAAGGATGCTCAACATCACTAATC
ATTAGAGAAATGCAAATCAAAACTACAATGAGGTATCACCTCACACCGGT
CAGAATGGCCATCATCAAAAAATCTACAAACAATAAATGCTGGAGAGGGT
GTGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAATGTAAATTGATA
CAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAAACTAAAAATAGA
ACTACCATACGACCCAGCAATCCCACTACTGGGCATATACCCTGAGAAAA
CCATAATTCAAAAAGAGTCATGTACCACAATGTTCATTGCAGCTCTATTT
ACAATAGCCAGGACATGGAAGCAACCTAAGTGTCCATCGACAGATGAATG
GATAAAGAAGATGTGGCACATATATACAATGGAATATTACTCAGCCATAA
AAAGAAACGAAATTGAGTTATTTGTAGTGAGGTGGATGGACCTAGAGTCT
GTC
>rnd-1_family-4#SINE/tRNA ( RepeatScout Family Size = 8800, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GGGACTTCCCTGGTGGTCCAGTGGTAAAGAATCCGCCTTCCAATGCAGGG
GACGCGGGTTCGATCCCTGGTCGGGGAACTAAGATCCCACATGCCGCGGG
GCAACTAAGCCCGCGCGCCACAACTACTGAGCTCGCGCGCCTCAACTAGA
GAGCCCGCGTGCCGCAAACTACAGAGCCCACGCGCCCTGGAGCCCGCGCG
CCACAACTAGAGAGAGAAAACCCGCGCGCCACAACTAGAGAGAAGCCCGC
GCGCCGCAACGAAGAGCCCGCGCGCCGCAACGAAGATCCCGCGTGCCTCA
ACGAAGATCCCGCGTGCCGCAACTAAGACCCGACGCAGCCAAAAATAAAT
AAAATAAAATAAATTTAAAAAAA
>rnd-1_family-79#LTR/ERVL-MaLR ( RepeatScout Family Size = 552, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGCTATGGACTGAATGTTTGTGTCCCCCCAAAAATTCATATGTTGAAGCC
CTAACCCCCAATGTGATGGTATTTGGAGGTGGGGCCTTTGGGAGGTAATT
AGGGTTAGATGAGG
>rnd-1_family-23#LINE/L1 ( RepeatScout Family Size = 3137, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGTTTATAGCAGCTTTATTCATAATTGCCAAAACTTGGAAGCAACCAAG
ATGTCCTTCAGTAGGTGAATGGATAAATAAACTGTGGTACATCCAGACAA
TGGAATATTATTCAGCGCTAAAAAGAAATGAGCTATCAAGCCATGAAAAG
ACATGGAGGAANCTTAAATGCATATTACTAAGTGAAAGAAGCCAATCTGA
AAAGGCTACATACTGTATGATTCCAACTATATGACATTCTGGAAAAGGCA
AAACTATGGAGACAGTAAAAAGATCAGTGGTTGCCAGGGGTTGGGGGAGA
GGGAGGGATGAATAGGCGGAGCACAGAGGATTTTTAGGGCAGTGAAANTA
CTCTGTATGATACTATAATGGTGGATACATGTCATTATACATTTGTCCAA
ACCCATAGAATGTACAACACCAAGAGTGAACCCTAATGTAAACTATGGAC
TTTGGGTGATNATGATGTGTCAATGTAGGTTCATCAATTGTAACAAATGT
ACCACTCTGGTGGGGGATGTTGATAATGGGGGAGGCTGTGCATGTGTGGG
GGCAGGGGGTATATGGGAAATCTCTGTACCTTCCNCTCAATTTTGCTGTG
AACCTAAAACTGCTCTAAAAAA
>rnd-1_family-45#LINE/L1 ( RepeatScout Family Size = 1188, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CAGAATGGCCATCATCAAAAAATCTACAAACAATAAATGCTGGAGAGGGT
GTGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAATGTAAATTGATA
CAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAAACTAAAAATAGA
ACTACCATACGACCCAGCAATCCCACTACTGGGCATATACCCTGAG
>rnd-1_family-27#LINE/L1 ( RepeatScout Family Size = 2685, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
GAACTCTACTCAGTGCTCTGTGGTGACCTAAATGGGAAGGAAATCCAAAA
AAGAGGGGATATATGTATACGTATAGCTGATTCACTTTGCTGTACAGCAG
AAACTAACACAACATTGTAAAGCAACTATACTCCAATAAAAA
>rnd-1_family-76#LTR/ERVL-MaLR ( RepeatScout Family Size = 605, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGAGACACCAGGGACGTGCACGCACAGAGGAAAGACCATGTGAGGACACA
GCGAGAAGGCGGCCATCTGCAAGCCAAGGAGAGAGGCCTCAGGAGAAACC
AACCTGCCGACACCTTGATCTTGGACTTCCAGCCTCCAGAACTGTGAGAA
A
>rnd-1_family-36#SINE/MIR ( RepeatScout Family Size = 1961, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
CTCTGCCACTTACTAGCTGTGTGACCTTGGGCAAGTTACTTAACCTCTCT
GTGCCTCAGTTTCCTCATCTGTAAAATG
>rnd-1_family-81#LTR/ERVL-MaLR ( RepeatScout Family Size = 546, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGAAGCCCTAACCCCCAATGTGACTGTATTTGGAGATAGGGCCTTTAAGG
AGGTAATTAAGGTTAAATGAGGTCATAAGGGTGGGCCCTAATCCGATAGG
ACTGGTGTCCTTATAAGAAGAGGAAGAGA
>rnd-1_family-58#LINE/L1 ( RepeatScout Family Size = 908, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AAAACTATAAGACACTGATGAAAGAAATTAAAGATGATACAAACAGATGG
AGAGATATACCATGTTCTTGGATTGGAAGAATCAACATTGTGAAAATGAC
TATACTACCCAAA
>rnd-1_family-115#LINE/L1 ( RepeatScout Family Size = 230, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGTAAAATATGACATCAAAAACATAAAACGTGGGGGAGTAAAAATGTAG
ANCTTTTAGAATGCGTTTGAACTTAAGTGACTANCAGCTTAAAACAGACT
GTATATATATAGGTCGNTATATATGAACCTCATGGTAACCACAAACCAAA
AACCTACAATAGATACACAAAAAANAAAGAGAAAGGAATCCAAGCATAAC
ACTAAAGAAAGTCATCAAATCACAAGGGAAGAGAACAAAAGAAGAAGAAA
GGAACAGAGAAGACTACAAAAACAACCGGAAAACAATTAACAAAATGGCA
ATAAGTACATACCTATCAATAATTACTTTAAATGTAAATGGACTAAAT
>rnd-1_family-92#LTR/ERVL-MaLR ( RepeatScout Family Size = 416, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTGGTAGGCTGAATAATGGCCCCCCAAAGATGTCCACGTCCTAATCCCC
GGAACCTGTGAATGTTACCTTACATGGCAAAAGGGACTTTGCAGATGTGA
TTAAGTTAAGGATCTTGAGATGGGGAGATTATCCTGGATTATCCGGGTGG
GCCCAA
>rnd-1_family-84#LTR/ERVL-MaLR ( RepeatScout Family Size = 506, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATATGTTGAAGTCCTAACCCCCAGTACCTCAGAATGTGACCTTATTTGGA
AATAGGGTCNTTGCAGATGTAATTAAGTTAAGATGAGGTCATACTGGANT
AGGGTGGGCCCCTAATCCA
>rnd-1_family-123#LINE/L1 ( RepeatScout Family Size = 200, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
ATGTAAGTCAAATCATTATGCTGTACACCTTAAACTTATACAGTGCTGTA
TGTCAATTATATCTCAATAAAACTGGAAGAAAAAAA
>rnd-1_family-67#LINE/L1 ( RepeatScout Family Size = 747, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
AGAAAATATTTGCAAATCATATATCTGATAAGGGACTNGTATCCAGAATA
TATAAAGAACTCTTACAACTCAATAACAAAAAAACAAA
>rnd-1_family-127#LTR/ERVL ( RepeatScout Family Size = 176, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TGTGATGGTTAATTTTATGTGTCAACTTGACTGGGCCACGGGGTGCCCAG
ATATTTGGTCAAACATTATTCTGGGTGTGTCTGTGAGGGTGTTTCTGGAT
GAGATTAACATTTGAATCGGTAGACTGAGTAAAGCAGATTGCCCTCCCTA
ATGTGGGTGGGCCTCATCCAATCAGTTGAAGGCCTGAATAGAACAAAAA
>rnd-1_family-31#LINE/L1 ( RepeatScout Family Size = 2247, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TCTTCCTTTTCTTCCGAGCCGCGTGGCTGGCGGGGTCTTGGTGCTCCGGC
CGGGTGTCGGGCCTGAGCCTCTGAGGTGGGAGAGCCGAGTCCAGGACACT
GGACCACCAGAGACCTCCCGGCCCCACGTAATATCAATCGGCGAGAGCTC
TCCCAGAGATCTCCATCTCAACGCCAAGACCCAGCTCCACCCAACGGCCA
GCAAGCTCCAGTGCTGGACGCCCCATGCCAAACAACTAGCAAGACAGGAA
CACAACCCCACCCATTA
>rnd-1_family-85#LINE/L1 ( RepeatScout Family Size = 505, Final Multiple Alignment Size = 100, Localized to 2433 out of 3442 contigs )
TAAATGTAAGAGCTAAAACTATAAAACTCTTAGAAGAAAACATAGGGGAA
AATCTTCATGACNTTGGATTTGGCAATGATTTCTTGGATATGACACCAAA
AGCACAAGCAACAAAAGAAAAAATAGATAAATTGGACTTCATCAAAATTA
AAA
>rnd-1_family-148#LINE/L1 ( RepeatScout Family Size = 99, Final Multiple Alignment Size = 99, Localized to 2433 out of 3442 contigs )
AGAATAAAATACTTAGGAATAAATCTAACAAAAGANGTGNAAGACCTGTA
CGCTGAAAACTACAAAACACTGATGAAAGAAATTAAAGAA
>rnd-1_family-131#LINE/L1 ( RepeatScout Family Size = 148, Final Multiple Alignment Size = 99, Localized to 2433 out of 3442 contigs )
TCAATATCCTGGTTGTGATATTGTACTATAGTTTTGCAAGATGTTACCAT
TGGGGGAAACTGGGTGAAGGGTACACGGGATCTCTCTGTATTATTTCTTA
CAACTGCATGTGAATCTACAATTATCTCAAA
>rnd-1_family-121#LINE/L2 ( RepeatScout Family Size = 218, Final Multiple Alignment Size = 99, Localized to 2433 out of 3442 contigs )
CTCCTTGCTGTTCCTCGAACACGCCAAGCNCGTTCCCGCCTCAGGGCCTT
TGCACTTGCTGTTCCCTCTGCCTGGAACGCTCTTCCC
>rnd-1_family-70#LINE/L1 ( RepeatScout Family Size = 690, Final Multiple Alignment Size = 99, Localized to 2433 out of 3442 contigs )
AAGGATCATACACCATGATCAAGTGGGATTTATCCCAGGGATGCAAGGAT
TCTTCAATATACGCAAATCAATCAATGTGATACA
>rnd-1_family-149#LTR/ERV1 ( RepeatScout Family Size = 98, Final Multiple Alignment Size = 98, Localized to 2433 out of 3442 contigs )
AAAATGTTGCCTGCCATATCAGTAAACAAAGGATGTTGCGGCCATCAAGC
CGCCACCCTGCCGCCCCCACGGTGCGCCCTGAGGGAACTCAGGATGGGAA
AACACAGGATACTGGCCCCAGATAGTTGAGGTGCATATCAAAGGAATGAT
TTCAGTGAGCCCAGACTCTTGCATCTTCCCATACATAGAAAAGCGCTAAA
NTCATTAACTTGAGATGTCTGGTTTTCTTTGATTAGCAGTAATCTTTTGA
TGTT
>rnd-1_family-141#LTR/ERVL ( RepeatScout Family Size = 115, Final Multiple Alignment Size = 98, Localized to 2433 out of 3442 contigs )
CTGCAGATTTTGGACTTGTCAGCCTCCATAATCGCGTGAGCCAATTCCTT
ANAATAAATCTCTCTCTCTCTAT
>rnd-1_family-41#LINE/L1 ( RepeatScout Family Size = 1416, Final Multiple Alignment Size = 98, Localized to 2433 out of 3442 contigs )
TAAAAAACTAAAAATAGAGCTACCATATGATCCAGCAATCCCACTCCTGG
GCATATATCCGGAGAAAACCATAATTCGAAAAGATACATGCACCCCAATG
TTCATNGCAGCACTATTTACAATAGCCAGGACATGGAAGCAACCTAAATG
TCCATCGACAGANGAATGGATAAAGAAGATGTGGTACATATATACAATGG
AATATTACTCAGCCATAAAAAAGAATGAAATAATGCCATTTGCAGCAACA
TGGATGGACCTAGAGATTATCATACTAAGTGAAGTAAGTCAGACAGAGAA
AGACAAATATCATATGATATCACTTATACGTGGAATCTAA
>rnd-1_family-135#LINE/L1 ( RepeatScout Family Size = 132, Final Multiple Alignment Size = 97, Localized to 2433 out of 3442 contigs )
GACCCAGGGGAAGGAGCAGTGACCCCATAGGAGACTGAACCAGACCTACC
TGCTAGTGTTGGAGGGTCTCCTGCAGAGGCGGGGGGCGGCTGTGGCTCAC
CGTGGGGACAAGGACACTGGCAGCAG
>rnd-1_family-74#LINE/L1 ( RepeatScout Family Size = 639, Final Multiple Alignment Size = 97, Localized to 2433 out of 3442 contigs )
AAATCAAAGAGGAAATCAAAAAATACCTNGAAACGAATGANAATGAAAAC
ACGACGATCCAAAACCTATGGGATGCAGCNAAAGCAGTNCTNAGAGGGAA
GTTTATAGCNNTAAANGCCTACNTTAAGAAANAAGAAAAATCTCAAATAA
ACAA
>rnd-1_family-150#LINE/L1 ( RepeatScout Family Size = 96, Final Multiple Alignment Size = 96, Localized to 2433 out of 3442 contigs )
AAAATACATGAAGCAAAAACTGACAGAACTGAAAGGAGAAATAGACAAAT
CCACAATTATAGTTGGAGATTTCAACA
>rnd-1_family-151#LTR/ERVL ( RepeatScout Family Size = 96, Final Multiple Alignment Size = 96, Localized to 2433 out of 3442 contigs )
GTTCCTGGCACAGAGCTCCTAAAACCCTTGGAATTTCCTGAGTGATAAGA
G
>rnd-1_family-152#LTR/ERVL ( RepeatScout Family Size = 94, Final Multiple Alignment Size = 94, Localized to 2433 out of 3442 contigs )
AAGTAAAGTGTTTCCCTGAGTTCTGTGAGCCGCTCTAGCAAATTAATCGA
ACCCGAGGAGGGGGTCGTGGGAACCTCCGATTTATAGCCGGTCGGTCAGA
AG
>rnd-1_family-153#LINE/L1 ( RepeatScout Family Size = 94, Final Multiple Alignment Size = 94, Localized to 2433 out of 3442 contigs )
TTAATAATAATGTATCAATATTGGTTCATTAATTGTAACAAATGTACCAC
ACTAATGTAAGATGTTAATAATAGGGGAA
>rnd-1_family-154#DNA/TcMar-Tigger ( RepeatScout Family Size = 93, Final Multiple Alignment Size = 93, Localized to 2433 out of 3442 contigs )
ACCCTCCACCAGCAAAAAGATTACGACTCGCTGAAGGCTCAGATGATGGT
TAGCATTTTTTAGCAATAAAGTATTTTTAAATTAAGGTATGTACATTGTT
TTTTAGACATAATGCTATTGCACACTTAATAGACTACAGTATAGTGTAAA
CATAACTTTTATATGCACTGGGAAACCAAAAAATTCGTGTGACTCGCTTT
ATTGCGATATTCGCTTTATTGCGGTGGTCTGGAACCGAACCCGCAATATC
TCTCGAGGTATG
>rnd-1_family-155#LTR/ERVL ( RepeatScout Family Size = 93, Final Multiple Alignment Size = 93, Localized to 2433 out of 3442 contigs )
TATATACATACATCCTATTGGTTCTGTTTCTCTGGAGAACCCTGACTAAT
ACA
>rnd-1_family-156#LTR/ERV1 ( RepeatScout Family Size = 92, Final Multiple Alignment Size = 92, Localized to 2433 out of 3442 contigs )
GTGAGCCGGTGAGCCCTGAGGGAACTCAGGANGGAAAAAGTGCCTGCCTA
GCAGCCATCAGCCACTGCAGCCGCCCCCGACGGTGCGCCCTGAGGGAACT
CAGGATGGGAAAANACAGGATACTGGCCCCAGATAGTTGAGGTGCATATC
AAAGGAATGATTTCAGTGAGCCCAGACTCTTGCATCTTCCCATACATAGA
AAAGCGCTAAANTCATTAACTTGAGA
>rnd-1_family-157#LTR/ERVL ( RepeatScout Family Size = 92, Final Multiple Alignment Size = 92, Localized to 2433 out of 3442 contigs )
GGAGGGGAGAGGGGCTGGAGATTGAGTTCAATCACCAATGGCCAATGATT
TAATCAATCATGCCTACGTAATGAAGCCTCCATAAAACCCCAAAAGGACG
GGGTTCGGAGAGCTTCCGGGTTGGTGAA
>rnd-1_family-158#LTR/ERV1 ( RepeatScout Family Size = 92, Final Multiple Alignment Size = 92, Localized to 2433 out of 3442 contigs )
TTACCTCACCACCAACCAATCAGAAGAATGTCCACGAGCTGATCACGCAC
CCTGCGACCCTCTCCCTCACCTTGCCTTTAAAAACCCTTCCCTGAAAGCC
ATCGGGGAGTTCGGGTCTTTTGAGCACGAGCCGCCCGTTCTCCTTGCTTG
GCGCCCTGCAATAAACGCTGCACTTTCCTTCACCACAACCCGGTGTCAGT
AGATTGGCTTTACTGCGCGCGGGCANGCGGACCCAAGTTTGGTTCGGTAA
CA
>rnd-1_family-159#LTR/ERV1 ( RepeatScout Family Size = 92, Final Multiple Alignment Size = 92, Localized to 2433 out of 3442 contigs )
GCCATCAAGCCGCCACCCTGCCGCCCCCACGGTGCGCCCTGAGGGAACTC
AGGATGAGAAAACACAGGATACTGGCCCCAGATAGTTGAGGTGCATATCA
AAGGAATGATTTCAGTGAGCCCAGACTCTTGCATCTTCCCATACATAGAA
AAGCGCTAAANTCATTAACTTGAGATGTCTGGTTTTCTTTGATTAGCAGT
AATCTTTTGATGTTCCGACTACCTGGTCTTT
>rnd-1_family-160#DNA/TcMar-Tigger ( RepeatScout Family Size = 91, Final Multiple Alignment Size = 91, Localized to 2433 out of 3442 contigs )
CAACTATTTACATAGCATTTACATTGTATTAGGTATTATAAGTAATCTAG
AGATGATTTAAAGTATACGGGAGGATGTGCGTAGGTTATATGCAAATACT
ACGCCATTTTATATAAGGGACTTGAGCATCCGCGGATTTTGGTATCCGCG
GGGGGTCCTGGAACCAATCCC
>rnd-1_family-161#LINE/L1 ( RepeatScout Family Size = 91, Final Multiple Alignment Size = 91, Localized to 2433 out of 3442 contigs )
AATTAAACAACACACTTCTAAATAACCCATGGGTCAAAGAAGAAATCACA
AGGGAAATTAGAAAATATTTTGAACTGAATGAAAATGAA
>rnd-1_family-163#LTR/ERVL ( RepeatScout Family Size = 89, Final Multiple Alignment Size = 89, Localized to 2433 out of 3442 contigs )
GCTTCNGGATGGGGGCTGGTCGCCAGAAAGACCAAGCCGTGATTAGAGGG
TTGGAACTTTCAGCCCCACCCCCCCTCCTCCGGGGAGGGGAGAGGGGCTG
GAANTGAGGTTAATAATCGATCATGCCTACGTGATGAAGCCTCCATAAAA

>rnd-1_family-162#LTR/ERVL ( RepeatScout Family Size = 90, Final Multiple Alignment Size = 89, Localized to 2433 out of 3442 contigs )
GGGGGCAGTCTTGTGGGACTGAGCCCTTAACCTGTGGGATCTGACGCTAN
CTCCGGGTAGATAGTGTCAGAATTGAGTTGAATTGTAGGACACCCAGCTG
GTGTCGGAGAATTGCTT
>rnd-1_family-164#DNA/hAT-Charlie ( RepeatScout Family Size = 88, Final Multiple Alignment Size = 88, Localized to 2433 out of 3442 contigs )
CCCCCNNCCCCGTCCGTGGAAAAATTGTCTTCCACGAAACCGGTCCCTGG
TGCCAAAAAGGTTGGGGACCGCTGC
>rnd-1_family-134#LINE/L1 ( RepeatScout Family Size = 135, Final Multiple Alignment Size = 88, Localized to 2433 out of 3442 contigs )
AACCTGGAAGAAATGGACAAATTCTTAGAAANGCACAACCTGCCAAGACT
GAATCAGGAAGAAATAG
>rnd-1_family-165#DNA/TcMar-Tigger ( RepeatScout Family Size = 88, Final Multiple Alignment Size = 88, Localized to 2433 out of 3442 contigs )
AATTTTTTGGTTTCCCAGTGCATATAAAAGTTATGTTTACACTATACTGT
AGTCTATTAAGTGTGCAATAGCATTATGTCTAAAAAAACAATGTACATAC
CTTAATTTAAAAATACTTTATTGCTAAAAATGCTAACCATCATCTGAGCC
TTCAGCGAGTCGTAATCTTTTTGCTGGTGGAGGGTCTTGCCTCGATGTTG
ATGGCTGCTGACTGATCAGGGTGGTGGTTGCTGAAGGCTGGGGTGGCTGT
GGCAATTTCTTAAAATAAGACAACAA
>rnd-1_family-166#LINE/L1 ( RepeatScout Family Size = 86, Final Multiple Alignment Size = 86, Localized to 2433 out of 3442 contigs )
ATGTCAAAAGGACACAGGAGCCAACTTGAAGGGGCTCCCACTGGCCAAAN
CTGGGACAATTTGAGCATCAAAAAAAATAAT
>rnd-1_family-167#DNA/hAT-Charlie ( RepeatScout Family Size = 84, Final Multiple Alignment Size = 84, Localized to 2433 out of 3442 contigs )
CAGGGGTCCCCAACCCCCGGGCCGCGGACCGGTACCGGTCCGCGGCCTGT
TAGGAACCGGGCCGCACAGCAGGAGGTGAGCGGCGGGCGAGCGAGCGAAG
CTTCATCTGCCGCTCCCCATCGCTCGCATTACCGCCTGAACTCCGCCCCC

>rnd-1_family-168#LTR/ERV1 ( RepeatScout Family Size = 84, Final Multiple Alignment Size = 84, Localized to 2433 out of 3442 contigs )
AAAACTCCTATATATCCTGGCTCCTCCCTTACCTCTTCGGAGCAGTTCCT
CAGAGCTATCTGAGAGGCTGTCTCCCGGGCTANAGTCCTCAGTAATGTCC
CCGAATAAAACNTAACTCNCAACTTTTAGGTTGTGCATTTTTTTT
>rnd-1_family-169#LTR/ERV1 ( RepeatScout Family Size = 84, Final Multiple Alignment Size = 83, Localized to 2433 out of 3442 contigs )
TCACACACCCTGCGACCCCCTCCCTCACCTTGCCTTTAAAAACCCTTCCC
TGAAAGCCATCGGGGAGTTCGGGTCTTTTGAGCACGAGCCGCCCGTTCTC
CTTGCTTGGCCCCTGCAATAAACCTCACTTTCCTGCNCCACAACCCGGTG
TCAGTAGNTTGGCCTCACTGCGCGTGGGCACGCGGACCCGAGTTTGGTTC
GGTAACA
>rnd-1_family-105#LINE/L1 ( RepeatScout Family Size = 327, Final Multiple Alignment Size = 82, Localized to 2433 out of 3442 contigs )
TGAACAACACAATAANTGAAATNAAAAATACNCTAGAAGGAATCAATAGC
AGAATAACTGAGGCAGAAGAA
>rnd-1_family-44#LINE/L1 ( RepeatScout Family Size = 1297, Final Multiple Alignment Size = 82, Localized to 2433 out of 3442 contigs )
AAATCAAAACTACAATGAGGTATCACCTCACACCGGTCAGAATGGCCATC
ATCAAAAAATCTACAAACAATAAATGCTGGAGAGGGCGTGGAGAAAAGGG
AACCCTCTTGCACTGTTGGTGGGAATGTAAATTGATACAGCCACTATGGA
GAACAGTATGGAGGTTCCTTAAAAAACTAAAAATAGAACTACCATACGAC
CCAGCAATCCCACTACTGGGCATATACCCTGAGAAAA
>rnd-1_family-170#LINE/L2 ( RepeatScout Family Size = 82, Final Multiple Alignment Size = 81, Localized to 2433 out of 3442 contigs )
GGTGGTCAGGGAAGGCCTCTCTGAGGAGGTGACATTTGAGCAGAGACCTG
AA
>rnd-1_family-171#DNA/hAT-Charlie ( RepeatScout Family Size = 81, Final Multiple Alignment Size = 81, Localized to 2433 out of 3442 contigs )
TACTGAGCACTTGAAATGTGGCTAGTCCGAATTGAGATGTGCTGTAAGTG
TAAAATACACACCGGATTTCGAAGACTTAGTACGAAA
>rnd-1_family-172#DNA/TcMar-Tigger ( RepeatScout Family Size = 80, Final Multiple Alignment Size = 80, Localized to 2433 out of 3442 contigs )
CTTCGCTTTATTGCGCTTCGCAGATACTGCGTTTTTTACAAATTGAAGGT
TTGTGGCAACCCTGCGTCGAGCAAGTCTATCGGCGCCATTTTTCCAACAG
CATTTGCTCACTTCGTGTCTCTGTGTCACATTTTGGTAATTCTCGCAATA
TTTCAAACTTTTTCATTATTATATTTGTTATGGTGATCTGTGATCAGTGA
TCTTTGATGTTAC
>rnd-1_family-173#DNA/hAT-Charlie ( RepeatScout Family Size = 78, Final Multiple Alignment Size = 78, Localized to 2433 out of 3442 contigs )
TCAGAATCTGCATTTTAACAAGATCCCCAGGTGATTCGTATGCACATTAA
AGTTTGA
>rnd-1_family-175#LTR/ERV1 ( RepeatScout Family Size = 75, Final Multiple Alignment Size = 75, Localized to 2433 out of 3442 contigs )
GCCATCTGCCTCTACAAGGATCAAGTCATNAGCCACTGCAGCCGCTGACC
TNCAACGCACCCTGAAAGGAGTTCAGGGTGGAGATCAGGAATGAGGCACT
CTGTGCTCTGGGAAAACTGGCAGGACAGGCCCTCAGATAGTTAAGATGCA
TATCAGGAGAAGATTTCATGAGCCCAGACTCTTGCATCTTCCCATACATA
GAAAAGCGCTAAAATCATTAACTTGAGATGTCTGCTCCTCGTGACTAGC
>rnd-1_family-176#LTR/ERV1 ( RepeatScout Family Size = 74, Final Multiple Alignment Size = 74, Localized to 2433 out of 3442 contigs )
TGAAGGGGANCAGAATATGCCACCCCAAAATATGCCACTTTGGCATANGG
ATTATTTTGAGCTGAAGGCANTTGAGAAACAGC
>rnd-1_family-174#DNA/hAT-Tip100 ( RepeatScout Family Size = 77, Final Multiple Alignment Size = 74, Localized to 2433 out of 3442 contigs )
AGCTTGAAATCGGCCATGGTGGGAGTATTTACACCACGGAAATCGGCAAA
CGCTACAAATCAGG
>rnd-1_family-177#Satellite ( RepeatScout Family Size = 73, Final Multiple Alignment Size = 73, Localized to 2433 out of 3442 contigs )
GAATTACAGTGCCCCTGAGCTCCTTTCTTCAACTCGCTTTCTTGTGAGCT
GGCCGCAACACCGCAGGATGGCTTCAGGCCCTAATCTGGTTCCGGCACGG
CACGCTGAGCCTTTGGTTAATTCCTCTTCCTGGTGGGAAATGAGAGTTAA
ATTTGCCCGTCCAGACACCTCCAGCTAGTCTCTCATTGGTTCTCCCTATT
CCTGTTCATCTTCCGCAGAAATTGCAAACTGGGCCAAACAGGAGGTTAAA
GGCGCTGACTCTCCAAGTGGGGAGAGTGTTAGTAAAGCGTCTGGAATGTT
GCACCCGAGTACCAGGGGAGGAAAACTGAGACATATTTGAACACGTCTCC
GATTCACACGGTTGATCATACTCTGGGTTCCACATGCATGTTTTAGCTGA
AGGAAGAATACCTTAAACCTGGGGAGTTGAGACCCGTGGAATGGGTACCA
TGCAATATGACTTCAAAGGGTCTTCATTTGCTCACCGAACCTCTCCAATC
CTATCACTGCTGCGTTTATGCCCCTGTACACACGCTTGATTCTCTTTCGG
AGACATAGCAATCCATAGGTTTTAAGATACTT
>rnd-1_family-179#LTR/ERV1 ( RepeatScout Family Size = 72, Final Multiple Alignment Size = 72, Localized to 2433 out of 3442 contigs )
AAGAAGTTTGCAACAACCAGCCNCACCCCCTCCCCTTTTNGTATAAAAGA
AGCCNGCATCCNAACCCGGGTAAGATGGTTCTTTGGGACACTAGTCCGCC
ATCTTCTCGGTCTGCCGGCTTTCCGAATAAAGTCGCTATTCCTTGCCCCA
ACACCTCGTCTCTCATTTATTGGCCTGTCGTGCGGCGAGCAGTACGAGCT
TGGACTCGGTAACA
>rnd-1_family-180#LINE/L1 ( RepeatScout Family Size = 71, Final Multiple Alignment Size = 71, Localized to 2433 out of 3442 contigs )
TACAGCGTAGGGAATATAGTCAATAATANTGTAATAACTTTGTATGGTGA
CAGATGGTNACTAGACT
>rnd-1_family-178#LTR/ERV1 ( RepeatScout Family Size = 72, Final Multiple Alignment Size = 70, Localized to 2433 out of 3442 contigs )
AAGAATGTTGCCTATAGCCTGAAATATACAGGATAGCCCATTCTCAAGGC
TCTGACCTTTAAAGGTATAACACTTTTCCATTCATATAGAGATAAAAAGT
TGCAGAACAGAGAATAACATTTGTCTTGTTGGAGGTTTACAGGAACATCG
TGACCNGACCTACGTGGACGGCTGCAAGAACAAAGGATTCCGACACCAAG
AAGTTTGCAACAACCAACCACACCCCCTCCCCTTTTNGTATAAAAGAAGC
CNGCATCCNAACCCGGGTAAGATGGTTCTTTGGGACACTAGTCCGCCATC
TTCTCGGTCTGCCGGCTTTCCGAATAAAGTCGCTATTCCTTGCCCCAACA
CCTCGTCTCTCGATTTATTGGCCTG
>rnd-1_family-181#LTR/ERV1 ( RepeatScout Family Size = 70, Final Multiple Alignment Size = 69, Localized to 2433 out of 3442 contigs )
CCCCCACCAGGTGGAAGAAGTTAACTGCATGCTGACCACGAGCACGTAGA
CCCCAGACCGGCTGGAACCAGAAGGTTGATGATGTTGACTCCGAACACCA
CCCTGTTACCTCACCACCAACCAATCAGAAGAATGTCCACGAGCTGATCA
CGCACCCTGCGACCC
>rnd-1_family-183#LTR/ERVL ( RepeatScout Family Size = 68, Final Multiple Alignment Size = 68, Localized to 2433 out of 3442 contigs )
TAATCGATCATGCCTACGTGATGAAGCCTCCATAAAAACCCNAAAGNACG
GGGTTCGGAGAGCTTCCGGGTTGGTGAACA
>rnd-1_family-182#DNA/TcMar-Tigger ( RepeatScout Family Size = 70, Final Multiple Alignment Size = 67, Localized to 2433 out of 3442 contigs )
TTTGTTTTTTATGTATTATTTGTGTGAAAAGTATTATAAACCTATTACAG
TACAGTACTATATAGCCGATTGTGTTAGTTGGGTACCTAGGCTAACTTTG
TTGGACTTACGAACAAATTGGACTTACGAACGCGCTCTCGGAACGGAACT
CGTTCGTATGTAGGGGACTTACTGTAT
>rnd-1_family-186#LTR/ERV1 ( RepeatScout Family Size = 65, Final Multiple Alignment Size = 65, Localized to 2433 out of 3442 contigs )
ATATGCCACNNTGGCATATTGATTATTTTGAGCTAAAGNTACTTGAGAAA
CGGCCGATGCAAGAAGGACACTCTGACCCTCCTTTTTCTCCCTGAAAGCA
GGAAATAAATCTCCCATGTGAAAGGTGCCCTCCCTGTACCNGGAGGGTAG
AAGCACCCTTATCACCAGAGATAGGGAATTCAGGGCCGAGAAGCCTGTAT
AAACAAACCTTGTTACTT
>rnd-1_family-184#LTR/ERV1 ( RepeatScout Family Size = 67, Final Multiple Alignment Size = 65, Localized to 2433 out of 3442 contigs )
TTCACCAAAAACTATATATCCTGGCTCCTCCCTTACCTCTTCGGAGCAGT
TCCTCAGAGCTATCTGAGA
>rnd-1_family-185#Satellite ( RepeatScout Family Size = 66, Final Multiple Alignment Size = 64, Localized to 2433 out of 3442 contigs )
TTTTTTCCTGAATATATTCAGGAAAAAACGCATACGCCCTTTTTGGCCAA
GTGCATCATTGTGGACGTTCTGCCTCTTTTCCTATGCTTTCAATGCAATT
CCAGTCTACCTCCTGAAATCGGTTTCCTGCAATTCTGCCCCGCTTTCAAG
TCCTCTTGGCAGCCTTACCTCAGTATATTTTTGGACGATAGCTGTCATTT
ATAACTCTGCAGGTTTGTGAATTACAGTGCCCCTGAGCTCCTTTCTTCAA
CTCGCTTTCTTGTGAGCTGGCCGCAACACCGCAGGATGGCTTCAGGCCCT
AATCTGGTTCCGGCACGGCACGCTGAGCCTTTGGTTAATTCCTCTTCCTG
GTGGGAAATGAGAGTTAAATTTGCCCGTCCAGACACC
>rnd-1_family-187#DNA/TcMar-Tigger ( RepeatScout Family Size = 64, Final Multiple Alignment Size = 64, Localized to 2433 out of 3442 contigs )
TACAGGCATACCTCGTTTTATTGCGCTTCGCTTTATTGCGCTTCGCAGAT
ACTGCGTTTTTTACAAATTGAAGGTTT
>rnd-1_family-188#DNA/TcMar-Tigger ( RepeatScout Family Size = 64, Final Multiple Alignment Size = 64, Localized to 2433 out of 3442 contigs )
TTTACAGTCGGCCCTCCGTATCCGCGGTTCCGCATCCGCGGATTCAACCA
ACCGCGGAT
>rnd-1_family-189#DNA/hAT-Charlie ( RepeatScout Family Size = 64, Final Multiple Alignment Size = 64, Localized to 2433 out of 3442 contigs )
ATCACAACAGATTGAATGCAGAAGCAGATATGAGAATCCAGCTGTCTTCT
ATTAAGCCAGACATTAAAGAGATTTGCAAAA
>rnd-1_family-190#LTR/ERVL-MaLR ( RepeatScout Family Size = 64, Final Multiple Alignment Size = 64, Localized to 2433 out of 3442 contigs )
TGTGGTAGNCAGCCTCTAAGATGGCCCCCAATGATCCCCGCCTCCTGGTA
TTCACGCCCTTGTGTAGTCCCCTCCC
>rnd-1_family-191#LTR/ERV1 ( RepeatScout Family Size = 63, Final Multiple Alignment Size = 63, Localized to 2433 out of 3442 contigs )
TGTAACCGAGCAGGACCCTATGGGGCCTTCCCGGGACAGACCCCTCCCCC
CATATCCTCTGCTTTAGCTCCTCTCTCAAGGGCTATAGATAATAGTATCT
GAGCACATNTCCTGAGCTGTTTTGCAGATACTGAAACCCCCACCAGGTGG
AAGAAGTTAACTACNTGATGACCACGAGC
>rnd-1_family-192#LTR/ERV1 ( RepeatScout Family Size = 63, Final Multiple Alignment Size = 63, Localized to 2433 out of 3442 contigs )
AACTTTTGTTTGTTTTTCTCCTGTTAATCTGTCTTATGTCAATTTAATTN
TTAGNCCAGCCAGAAGAACCTAGGAGGGTAGA
>rnd-1_family-193#DNA/TcMar-Tigger ( RepeatScout Family Size = 63, Final Multiple Alignment Size = 63, Localized to 2433 out of 3442 contigs )
CCATTTTTCCAACAGCATTTGCTCACTTCGTGTCTCTGTGTCACATTTTG
GTAATTCTCGCAATATTTCAAACTTTTTCATTATTATATTTGTTATGGTG
ATCTGTGATCAGTGATCTTTGATGTTACTATTGTAATTGTTTTGGGGCGC
CACGAACCGCGCCCATATAAGACGGCGAACTTAATCGATAAATGTTGTGT
GTGTTCTGACTGCTCCAC
>rnd-1_family-194#DNA/hAT-Tip100 ( RepeatScout Family Size = 62, Final Multiple Alignment Size = 62, Localized to 2433 out of 3442 contigs )
CAGTCGCACAGGGCCCGCGCTCAGAAGGGCCCCGCGCTTGGTTTAATGCT
CTGCTGTCGCCGTCTTGAAATTCTTAATAATTTT
>rnd-1_family-195#DNA/TcMar-Mariner ( RepeatScout Family Size = 62, Final Multiple Alignment Size = 62, Localized to 2433 out of 3442 contigs )
TATTGGGTTGGCCAAAAGGTTCGTTCGGTTTTTTCCGTAAGATGGCTCTA
GTAGCACTTAGTTGTCTTTAACTTCATTCGAAACAATTTTGTTAGATTGT
ATTGTGACAGCTGTCATATCAGCGTGCATTTAAAAAAAGACTTATCAAAA
TTGGTGAATTTTTGTGTAGCCATTTTAATATTGAAGATGGAAGAAAAAAA
GCAACATTTTCGGCATATTATGCTTTATTATTTCAAGAAAGGTAAAAACG
CAACTGAAACGCAAAAAAAGATTTGTGCAGTGTATGGAGAAGGTGCTGTG
ACTGATCGAACGTGTCAAAAGTGGTTTGCGAAGTTTCGTGCTGGAGATTT
CTCGCTGGACGATGCTCCACGGTCGGGTAGACCAGTTGAAGTTGATAGCG
ATCAAATCGAGACATTAATTGAGAACAATCAACGTTATACCACGCGGGAG
ATAGCCGACATACTCAAAATATCCAAATCAAGCGTTGAAAATCATTTGCA
CCAGCTTGGTTATGTTAATCGCTTTGATGTTTGGGTTCCACATAAGTTAA
GCGAAAAAAACCTTCTTGACCGTATTTCCGCATGCGATTCTCTACTTAAA
CGTAACGAAAACGTTCCGTTTTTAAAACAAATTGTGACGGGCGATGAAAA
GTGGATACTGTACAATAATGTGGAACGGAAGAGATCGTGGGGCAAGCGAA
ATGAACCACCACCAACCACACCAAAGGCCGGTCTTCATCCAAAGAAGGTG
ATGTTGTGTATATGGTGGGATTGGAAGGGAGTCCTCTATTATGAGCTCCT
TCCGGAAAACCAAACGATTAATTCCAACAAGTACTGCTCCCAATTAGACC
AACTGAAAGCAGCACTCGACGAAAAGCGTCCAGAATTAGTCAACAGAAAA
CGCATAATCTTCCATCAGGATAACGCAAGACCGCATGTTTCTTTGATGAC
CAGGCAAAAACTGTTACAGCTTGGCTGGGAAGTTCTGATTCATCCGCCGT
ATTCACCAGACATTGCACCTTCGGATTTCCATTTATTTCGGTCTTTACAA
AATTCTCTTAATGGAAAAAATTTCAATTCCCTGGAAGACTGTAAAAGGCA
CCTGGAACAGTTCTTTGCTCAAAAAGATAAAAAGTTTTGGGAAGATGGAA
TTATGAAGTTGCCTGAAAAATGGCAGAAGGTAGTGGAACAAAAGGGTGAA
TACGTTGTTCAATAAAGTTCTTGGTGAAAATGAAAAATGTGTCTTTTATT
TTTACTTAAAAACCGAAGGNACTTTTTGGCCAACCCAATA
>rnd-1_family-196#LINE/L1 ( RepeatScout Family Size = 62, Final Multiple Alignment Size = 62, Localized to 2433 out of 3442 contigs )
GTATAAAGTTTCAGTTATGCAAGATGAATAAGTTCTAGAGATCTGNTGTA
CAGCA
>rnd-1_family-197#LTR/ERVL-MaLR ( RepeatScout Family Size = 60, Final Multiple Alignment Size = 60, Localized to 2433 out of 3442 contigs )
AGGTTGCAGATGGAATTAAGTTGCTAATCAGCTGACCTTAAAATAGGGAG
ATTATCCTGGATTATC
>rnd-1_family-198#LTR/ERVL ( RepeatScout Family Size = 59, Final Multiple Alignment Size = 58, Localized to 2433 out of 3442 contigs )
CCCAGTTATTCGATCAAACACTAATCTAGGTGTTGCTGTGAAGGTATTTT
GTAGATGTGATTAACAGTTACAATCAGTTGACTTTAA
>rnd-1_family-199#Unknown ( RepeatScout Family Size = 58, Final Multiple Alignment Size = 58, Localized to 2433 out of 3442 contigs )
GAGTCAAGATGGCGGNGTGGGAGGACGCGGAGTTCGCGTCTCCCCACAAC
TAGGGCACCTGCCGGNCGCCGGTGGGGGACCNTGGACGCCCAAGGGGACG
GGAGGAACCCCCAGCGACCGGGTAGGACGTGGGGCGTGGGGGGAGTGAAG
GGGGAGGAGAAGTGGAGGCCGGACGGGACCGGCGCCCCTGAGGCTGGGGG
AGGGGAGGGGATCCCACGCCCAAGGGGGAAATTGGGGGACCACTGGGAGG
GCAGAGGANCAGAAGGGAGCGCGGCCAGGTTTCCCCTGCCCACTCGGGCC
CCGGGGAGCCTGCTGGGCTCCCGGGCCTGATCCTCTGCCCTCCGAGGCCC
CCTCCAGCCGCGCGGGTCCTGAGGGAGTGGGAGGGAGGGAAGGGGGAGCA
AAAGTAAAGGCCGGACCTCCGGGACCGGCACCCCTGAGGGGTGGCTGGGG
GAGGGGAGGAGTTCCTACACCCAGCGGGACCCACCCACGGTTAGGGGTCC
A
>rnd-1_family-200#LTR/ERVL ( RepeatScout Family Size = 57, Final Multiple Alignment Size = 57, Localized to 2433 out of 3442 contigs )
CCCAACTCCACGGGGACAGAAGCTCCTGCGCTCGGGACCCTCCCAGACCT
CGCCCTATGTATCTCTTCATCTGGCTGTTCATCTGTATCCTTTATCATAT
CCTTTAATAAA
>rnd-1_family-201#LINE/L1 ( RepeatScout Family Size = 56, Final Multiple Alignment Size = 56, Localized to 2433 out of 3442 contigs )
CAAATAGAGAATATCAATAAAGAGATAGAAATTATAAAAAAGAACCAAAT
AGAAATTCTGGAGCTGAAAAGTACAATAACTGAAATGAAAAATTCACTAG
A
>rnd-1_family-202#Satellite ( RepeatScout Family Size = 56, Final Multiple Alignment Size = 56, Localized to 2433 out of 3442 contigs )
TTTGAATTTTTTTGGCCATTTCCTACCTCAGGACATTTTTTGAGGGCAGG
TGTCATTTACAGGCCCTGCAGTNNTTGTGAATATTAAGTGACCATTAGCA
CCGGNTTTAAAGCCGCTGTTGCGGGAAACGGCCACAAGGCGGCAGCATTT
CTCCATTCCCNAATCTGGTTNCTAGGGCAGCAGAGCCTTCCTGGAAGTCG
TGTTCCTAGGTTGNAAATTAGAGTGGAATGTGCCAGGANAAACCCCCAAA
AGCTTATGTCTCATTACTTCTTGTTTGTT
>rnd-1_family-203#LINE/L1 ( RepeatScout Family Size = 56, Final Multiple Alignment Size = 56, Localized to 2433 out of 3442 contigs )
GGAAGCCCCTTCACTGGCGGAGATCGGTGGGGCGGAGGGGGGAAGCTTCG
GAGCCACGGAGGAGAGCGCAGCAACAGGGGTGCGGAGGGCAAAGCGGAGA
GATTCCCGCACAGAGGATCGGTGCCGACCAGCACTCACCAGCCCGAGAGG
CTTGTCTGCTCACCCGCCGGGGCGGGCGGGGGCTGGGAGCTGAGGCTCGG
GCTTCGGAGGTCAGATCCCGGGGAGAGGACTGGGGTTGGCTGCGTGAANA
CAGCCTGAAGGGGGCTAGTGCGCCACAGCTAGCCGGGAGGGAGTCCGGGA
AAAAGCCTGGACCTGCCNNAGAGGCAAGGCGCCATTGTTGAGGGGCGCGC
GAGGGGAGGGG
>rnd-1_family-204#LINE/L1 ( RepeatScout Family Size = 55, Final Multiple Alignment Size = 55, Localized to 2433 out of 3442 contigs )
AACTTTACAGTGGAGAAACCTGGCAGACACCACCTTAACCAAGTGATCAA
GGTTAACATCACCAGT
>rnd-1_family-205#LINE/L1 ( RepeatScout Family Size = 54, Final Multiple Alignment Size = 54, Localized to 2433 out of 3442 contigs )
CAACTGAAAGAGCTCCCAATGGCCAAAGCTGGAACAATTTGAGCAACAAA
ATAAAGAAATAGTATTGGATTATAACCCAAAGTATAAAATAAATA
>rnd-1_family-206#LTR/ERV1 ( RepeatScout Family Size = 53, Final Multiple Alignment Size = 53, Localized to 2433 out of 3442 contigs )
TGAAACAGGAGGGAAGGGGGCAGGGCACAACCTTTAAAAGAATGACACAG
CCGTTAGGACACGACANAAACTGGTTAGAACCAACTAGGTCCAAGATGGC
GGAAGATTCGACTTCCAGTAGACCTTGAGCCTCATTATACGCTCATTGTA
ATACATTAGCATGCTAAATGACACACCCACCGGCGCCATGACAGTTCCGA
GGCCGACCATAAAAGGCCAAAAAGTGGGCGGTGGCCCAATTCCTGGAAAT
CCCCGCCCCTTCCCCGAAATAGTTGGAATAATCCTCCCACTCATTAGCCT
ATGAAATTACCCAGCCCATAAAAACTAACCACCCCATATCTCGGGGCCTC
TCGCCTTCTGAGATGGCCCACACTCTGTCTGTGGAGTGTGTNTCTCCCTA
AATAAATC
>rnd-1_family-207#LTR/ERVL-MaLR ( RepeatScout Family Size = 52, Final Multiple Alignment Size = 52, Localized to 2433 out of 3442 contigs )
TTAAGCCACTAAGTTTGTGGTAATTTGTTACGGCAGCAATAGAAAACTAA
TACA
>rnd-1_family-208#LTR/ERV1 ( RepeatScout Family Size = 51, Final Multiple Alignment Size = 51, Localized to 2433 out of 3442 contigs )
GACTCCATATTGGATCTGTTTCTTTTACTTTAACCTTTGTNTTCTGTTGC
TTTTGCTACAAGTTAATCACTAAAAGGATGTTGCCTATAGCCTGAAGTAT
ACATAATGGCCCGTCTCAGGGAACCCTGCCCCTCATGCCTGAATGTTAAG
CTAAAGTGCCTTTGTTCAGCTCACAGGAAACATCCTGACCCNGCCCACCT
GTGAATGGCTGCAGGAAAGAAGAAATTAACACATCC
>rnd-1_family-209#Unknown ( RepeatScout Family Size = 51, Final Multiple Alignment Size = 51, Localized to 2433 out of 3442 contigs )
GCTGCATGCACCCATGCCTTGTGCATGCCTCCCCGTGCATGCAGTCCCAT
GCACGCTGCTCCATGCAACGCTGCCCCGTTTGCACTGCTCCACGCAGCCT
GCTGCATGCACCCATGCCTTGTGCATGCCTCCCCGTGCATGCAGTCCCAT
GCACGCTGCTCCATGCA
>rnd-1_family-210#LINE/L1 ( RepeatScout Family Size = 51, Final Multiple Alignment Size = 51, Localized to 2433 out of 3442 contigs )
AGGAACCAGGGCTCCTTGGAGAAATGGCTGATTCCAGGGCTGGGGCAGGG
AA
>rnd-1_family-211#DNA/TcMar-Tigger ( RepeatScout Family Size = 50, Final Multiple Alignment Size = 50, Localized to 2433 out of 3442 contigs )
AAATTTCCAGAAAGTTCCAAAAAGCAAAACTTGAATTTGCCGCGCGCCGG
CAACTATTTACATAGCATTTACATTGTATT
>rnd-1_family-212#LINE/L1 ( RepeatScout Family Size = 50, Final Multiple Alignment Size = 50, Localized to 2433 out of 3442 contigs )
AAAAAAACTGTCAACCTAGAATTCTATATCCAGCGAAAATATCCTTCAAA
AATGAAGGAGAAA
>rnd-1_family-213#LTR/ERV1 ( RepeatScout Family Size = 49, Final Multiple Alignment Size = 49, Localized to 2433 out of 3442 contigs )
TCTGTCTCCCTGAAAGCAGGAAATAAATCTCCCATGTGAAAGGTGCCCTC
CCTGCACCNGGAGGTAGAAGGACACCCTTATCACCAGAGATAGGAATTCA
GGCCGAGAAGCCTGTATAAACAAACCTTGTTACTTCTTTAATTTACTACC
CCAAGCCCAAACTCTGTTTAGATTCTTCACTAATTGAGCACCCCAAACCT
AAGTTTCTTTGTCCTGTCAATTCCTCACAAATTTATTGTTTCTTTGTCTA
AAAAGTATAAAAG
>rnd-1_family-214#LINE/L1 ( RepeatScout Family Size = 48, Final Multiple Alignment Size = 48, Localized to 2433 out of 3442 contigs )
CAAACTCATCAAGTTGTATACATTAAATATGTACAGCTTTTGTATGTCAA
TCATACCTCAATAAAGTGTTTTAAAAA
>rnd-1_family-215#LTR/ERV1 ( RepeatScout Family Size = 48, Final Multiple Alignment Size = 48, Localized to 2433 out of 3442 contigs )
AATTCCCGGAACACCACCCTGTTACCTCACCACCAACCAATCAGAAGAAN
GTCCACGAGCTGATCACGCACCCCGCAA
>rnd-1_family-216#LTR/ERV1 ( RepeatScout Family Size = 48, Final Multiple Alignment Size = 48, Localized to 2433 out of 3442 contigs )
TGTAACAGGGAAGAACAAATCTGACTCCATATTGGATCTGTTTCTTTTAC
TTTAACCTTTGTNTTCTGTTGCTTTTGCTACAAGTTAA
>rnd-1_family-217#Satellite ( RepeatScout Family Size = 46, Final Multiple Alignment Size = 46, Localized to 2433 out of 3442 contigs )
ATTTGAACACGTCTCCCGATCACACGGTTGATCATACTCTGGGTTCCACA
TGCATGTTTTAGCTGAAGGAAGAATACCTTAAACCTGGGGAGTTGAGACC
CGTGGAATGGGTACCATGCAATATGACTTCAAAGGGTCTTCATTTGCTCA
CCGAACCTCTCCAATCCTATCACTGCTGCGTTTATGCCCCTGTACACACG
CTTGATTCTCTTTCGGAGACATAGCAATCCATAGGTTTTAAGATACTTAC
TAGTCAGGTACATTCTTAGGCGTTTAATATGGGGTGTTGAGT
>rnd-1_family-218#LTR/ERV1 ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2433 out of 3442 contigs )
AAGAAAGAAGAAATTAACACATCCCCTCCCGAGGCTGGCCAAACCAGGAG
ATATTTGGCAAGACTTATGGCCTTTTTACTTTACTTCCTCACCTCCTCCC
CCTCTCTGTTCTATAAAAGAAACCGGCATCCNAACCCCGGTAAGATGGTT
CTTTGGGACACTAGTCCGCCATCTTCTCGGTCTGCCTGGCTTTCCGAATA
AAGTC
>rnd-1_family-219#DNA/TcMar-Mariner ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2433 out of 3442 contigs )
AAAAGTGGTTTGCGAAGTTTCGTGCTGGAGATTTCTCGCTGGACGATGCT
CCACGGTCGGGTAGACCAGTTGAAGTTGATAGCGATCAAATCGAGACATT
AATTGAGAACAATCAACGTTATACCACGCGGGAGATAGCCGACATACTCA
AAATATCCAAATCAAGCGTTGAAAATCATTTGCACCAGCTTGGTTATGTT
AATCGCTTTGATGTTTGGGTTCCACATAAGTTAAGCGAAAAAAACCTTCT
TGACCGTATTTCCGCATGCGATTCTCTACTTAAACGTAACGAAAACGTTC
CGTTTTTAAAACAAATTGTGACGGGCGATGAAAAGTGGATACTGTACAAT
AATGTGGAACGGAAGAGATCGTGGGGCAAGCGAAATGAACCACCACCAAC
CACACCAAAGGCCGGTCTTCATCCAAAGAAGGTGATGTTGTGTATATGGT
GGGATTGGAAGGGAGTCCTCTATTATGAGCTCCTTCCGGAAAACCAAACG
ATTAATTCCAACAAGTACTGCTCCCAATTAGACCAACTGAAAGCAGCACT
CGACGAAAAGCGTCCAGAATTAGTCAACAGAAAACGCATAATCTTCCATC
AGGATAACGCAAGACCGCATGTTTCTTTGATGACCAGGCAAAAACTGTTA
CAGCTTGGCTGGGAAGTTCTGATTCATCCGCCGTATTCACCAGACATTGC
ACCTTCGGATTTCCATTTATTTCGGTCTTTACAAAATTCTCTTAATGGAA
AAAATTTCAATTCCCTGGAAGACTGTAAAAGGCACCTGGAACAGTTCTTT
GCTCAAAAAGATAAAAAGTTTTGGGAAGATGGAATTATGAAGTTGCCTGA
AAAATGGCAGAAGGTAGTGGAACAAAAGGGTGAATACGTTGTTCAATAAA
GTTCTTGGTGAAAATGAAAAATGTGTCTTTTATTTTTACTTAAAAACCGA
AGGNACTTTTTGGCCAACCCAATA
>rnd-1_family-220#Simple_repeat ( RepeatScout Family Size = 45, Final Multiple Alignment Size = 45, Localized to 2433 out of 3442 contigs )
TGTAACAGGGAAGAACAAATCTGACTCCATATTGGATCTGTTTCTTTTAC
TTTAACCTTTGTNTTCTGTTGCTTTTGCT
>rnd-1_family-221#LTR/ERVL ( RepeatScout Family Size = 44, Final Multiple Alignment Size = 44, Localized to 2433 out of 3442 contigs )
TCTCTCTGCTTGAGCTGGGACATCCATCTTCTCCTGCCCTCGGACATCGG
CGCTCCTGGTTCTCAGGCCTTCGGACTCAGAC
>rnd-1_family-222#LTR/ERV1 ( RepeatScout Family Size = 44, Final Multiple Alignment Size = 44, Localized to 2433 out of 3442 contigs )
GCCTTTCTCGCCTTCTGAGATGGCCCACACTCTGTCTATGGAGTGTGTNT
CTCTCTAAATAAATCCACTTCTTACCTATCACTTTGTCTCTCGCTGAATT
CTTTCTGCGNCGAGACATNAAGAACCTGAGCTTCATTAAGTCCTGAGACC
AGGTGTGCGATTTCAATTAAAAG
>rnd-1_family-223#LINE/L1 ( RepeatScout Family Size = 43, Final Multiple Alignment Size = 43, Localized to 2433 out of 3442 contigs )
GAGGGAAGTGGGTGTGGCTATAAAAGGGCAACACGAGGGATCCTTGTGGT
GATGGAANTGTTCTGTATCTTGAC
>rnd-1_family-225#LTR/ERV1 ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 41, Localized to 2433 out of 3442 contigs )
CCTTGAACCATTGCTATAAAACTCCTCACCAAATCCTCCCAGGTTGGGAC
ACACAGTTTTGAGAGGCACGAGCCCGCTGTGNCCCCCTTTGCCTGGCAAA
GCAATAAAGCTATTCTTTTCTACTTCACCCAAAACTCTGTCTCCGAGATT
CGATTCGGCGCCGGTGCACAGAGGCCGAGTTTCGGCATCA
>rnd-1_family-226#LTR/ERV1 ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 41, Localized to 2433 out of 3442 contigs )
TGTATGTCACAGAAATAACCAAATTTCCTTGTCAATTGCATTATTATGAA
CTTTCATCAGATCTTTAACCATGGTCATTTTTAAGTCTTTTGTCATTTAC
AGACAGTTNTNGNTGTACTCTGATGCTTTTGCAAAAATGTTCCTATAAAA
GGGTTTCATCTTCAAGGAATTCATGGAAAAGACTCTGACAAGTACAGGTT
TCTGGTAACTGACTATACCGCTGAACTGAATGAATAAGCATTTTCAGAAC
TCTAATGGAAAACTGATGGATTCATAAAAGTGCTAACAAAAGATCAAGAT
GAAAAAAAATTAATTACATGGGACTGAGTGAACTGATGAGGATGATTATA
ATTTTTGTGACTTTCTGTTTGAATAAAAAAAAAAATCCCACAAGGACTCA
GAGGCAAAAAATATACAAATCAATTTTCACTGCAAAGTAAAGGAGCTGTT
ACAGTGGAGGATTCCTGGACTGAATGTCAATATTATGACATAGTGTGAGT
GTGTTTCGTGTTTGGTAATTGCAATCATTGTTGCTTTTGTTGTGGTCATC
CATTTACAATGCTTGGTGTCAGTCTATTTATCTCTTGTAAAAATAAAATA
CAGTGTGTGTGTGTG
>rnd-1_family-224#LTR/ERV1 ( RepeatScout Family Size = 41, Final Multiple Alignment Size = 40, Localized to 2433 out of 3442 contigs )
TTTCTTTGTCTAAAAAGTATAAAAGCTGCCTGCTTTGGCCACTTCTTGGG
TCCCATTTCTATGAGACCTCCGTGCGCACGAATTAAAATTTGTTTCTTTT
TCTCCTGTTAATCTGTCTTGTGTCAATTTNATTA
>rnd-1_family-227#LTR/ERVL ( RepeatScout Family Size = 40, Final Multiple Alignment Size = 40, Localized to 2433 out of 3442 contigs )
CCCTTCCCCCATACCTTGCCCTATGCATCTCTTCCATCTGGCTGTTCCTG
AGTTATATCCTTT
>rnd-1_family-228#DNA/hAT-Tip100 ( RepeatScout Family Size = 40, Final Multiple Alignment Size = 40, Localized to 2433 out of 3442 contigs )
GGCCCCGCATTTTCATTTTGCACTGGGCCCCGCAAATTATGTAGCCGGTC
C
>rnd-1_family-229#LTR/ERV1 ( RepeatScout Family Size = 37, Final Multiple Alignment Size = 37, Localized to 2433 out of 3442 contigs )
CCCCTCTCCCCGGTTGCCGGCNTCCGAAATAAAGCAAACTTTCCTTTCCA
CCAACACTTGCCTCTTTATTGGCTTTTGAGCGGCGAGCAGCCGGACCCCA
CTTTCGGTAACA
>rnd-1_family-230#LTR/ERV1 ( RepeatScout Family Size = 36, Final Multiple Alignment Size = 36, Localized to 2433 out of 3442 contigs )
TGTAACCGAGCAGGACCCTATGGGGCCTTCCCGGGACAGACCCCTCCCCC
ATATCCTCTGCTTTAGCTCCTCTCTGAAGTACCTAGATAATAGTATCTGA
TGCATATTTCCTGAGTTGTTTTACAGATGCTAAAACCACCACCAAATGGA
AGA
>rnd-1_family-231#LTR/ERV1 ( RepeatScout Family Size = 35, Final Multiple Alignment Size = 35, Localized to 2433 out of 3442 contigs )
TGTAACCGAGCAGGACCCTATGGGGCCTTCCCGGGACAGACCCCTCCCCC
ATATCCTCTGCTTTAGCTCCTCTCT
>rnd-1_family-232#Unknown ( RepeatScout Family Size = 35, Final Multiple Alignment Size = 35, Localized to 2433 out of 3442 contigs )
AAGGCCTTGGCTGTGGAGGGCGGGGCCTAAGCAAGGGCGAGGTTTGGGCG
GTGGGCGGGGCCTATGCTCAGGACCCACAGGGCTGGAAAAGGCCCTGGGG
GCTGTGGGGGGTGGGGCTTAGGCTCAAGGAACAGAAGGGGCCCAGGCGTG
CCCCCCACCCCTGGTCTCAGAGGGCAGGGGACCTCACCTGGGAGCCCAGC
AGGCTTCCCGGGCCCGAGTGGGCGGGGCGAACGCCCTCCGCTCCTCTCCC
GCTCCTCCGGTCTGGGAGGGCCCCTCCCGCCTGCCTCTCCTGATCTCCCC
GGCCTCCCTCCTATGCCCCCAGGAC
>rnd-1_family-234#LINE/L1 ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2433 out of 3442 contigs )
TTTGTCAAAACTCATCGAACTGTACACTTAAAATNGGTGCATTTTACTGT
ATGTAAATTATACCTCAA
>rnd-1_family-235#LINE/L1 ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2433 out of 3442 contigs )
CTCTGTATTATTTCTTACAACTGCATGTGAATCTACAATTATCTCAAAAT
AA
>rnd-1_family-236#Unknown ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2433 out of 3442 contigs )
CAGAGTCAAGATGGCGGAGTGGGAGGACGCGGAGTTCGCGTCTCCCCACA
ACTAGGGCACCTGCCGGNCGCCGGTGGGGGACCCTGACGCCCAAGGGGAC
GGGAGGAACCCCCAAGCGAACCGGTAGGACGTGGGGAA
>rnd-1_family-237#DNA/TcMar-Tigger ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 33, Localized to 2433 out of 3442 contigs )
TTTTGTGCTTTTTGTTGGTGATTTCGCTGTTTAAAATGGCCCCAAGCGTA
GTGCTGAAGTGCTGTCTAGTGTTCCTAAGCGCAAGAAGGCTGTGATGTGC
CTTACGGAGAAAATACGCGTGTTAGATAAGCTTCGTTCAGGCGTGAGTTA
TAGTGCTGTTGGCCGTGAGTTCAATGTTAATGAATCAACAATATATATTA
AATAAGGTGTCTTTAAACAGAAACACGCATAAAACAAGGTTATGTATTGA
TCGGTTGACGAAAAT
>rnd-1_family-233#Unknown ( RepeatScout Family Size = 33, Final Multiple Alignment Size = 32, Localized to 2433 out of 3442 contigs )
AGTGTAGAGGTAGGGCCCTGGGTGGGGGTGTAGGGGCGGGGCTTAGGCTC
CGCGCGGCAGGAGGGGGGCTCNGAGGGCAGAGGATCAGGCCCGGGAGCCC
AGCAGGCTCCCCGGNGCCCGAGTGGGCGGGGAAAGCCCTGGCCGCGTTCC
CTTCCGNTCCTCCCTGCCCCCCCCGCCGTCTCCCCCGATCTCCCCCTTTG
GACCCCTAACCGTGGGTGGGTCCCGCTGGGTGTAGGAACTCCTCCCCTCC

>rnd-1_family-238#DNA/TcMar-Tigger ( RepeatScout Family Size = 32, Final Multiple Alignment Size = 32, Localized to 2433 out of 3442 contigs )
GGTGAGGAAGCTGCAGAAGAAAAGTCTGAAGCTAGCAGAGGTTGGTTCAT
GAGGTTTAAGGAAAGAAGCCGTCTCCATAACATAAAAGTGCAAGGTGAAG
CAGCAAGTGCTGATGTAGAAGCTGCAGCAAGTTATCCAGAAGATCTAGCT
AAGATAATTAATGAAGGTGGCTACACTAAACAACAGATTTTCAGTGTAGA
CGAAACAGCCTTCTATTGGAAGAAGATGCCATCTAGGACTTTCATAGCTA
GAGAGGAGAAGTCAATGCCTGGCTTCAAAGCTTCAAAGGACAGGCTGACT
CTCTTGTTAGGGGCTAATGCAGCTGGTGACTTTAAGTTGAAGCCAATGCT
CATTTACCATTCCGAAAATCCTAGGGCCCTTAAGAATTATGCTAAATCTA
CTCTGCCTGTGCTCTATAAATGGAACAACAAAGCCTGGATGACAGCACAT
CTGTTTACAACATGGTTTACTGAATATTTTAAGCCCACTGTTGAGACCTA
CTGCTCAGAAAAAAAAGATTCCTTTCAAAATATTACTGCTCATTGACAAT
GCACCTGGTCACCCAAGAGCTCTGATGGAGATGTACAACGAGATTAATGT
TGTTTTCATGCCTGCTAACACAACATCCATTCTGCAGCCCATGGATCAAG
GAGTAATTTCGACTTTCAAGTCTTATTATTTAAGAAATACATTTCGTAAG
GCTATAGCTGCCATAGATAGTGATTCCTCTGATGGATCTGGGCAAAGTAA
ATTGAAAACCTTCTGGAAAGGATTCACCATTCTAGATGCCATTAAGAACA
TT
>rnd-1_family-239#DNA/TcMar-Tigger ( RepeatScout Family Size = 32, Final Multiple Alignment Size = 32, Localized to 2433 out of 3442 contigs )
TGTGTTCTGACTGCTCCACCGACCGGCCGTTCCCCATCTCTCCCTCTCCT
CGGGCCTCCCTATTCCCTGAGACACAACAATATTGAAATTAGGCCAATTA
ATAACCCTACAATGGCCTCTAAGTGTTCAAGTGAAAGGAAGAGTCGCACG
TCTCTCACTTTAAATCAAAAGCTAGAAATGATTAAGCTTAGTGAGGAAGG
CATGTCGAAAGCCGAGATAGGCCGAAAGCTAGGCCTCTTGCGCCAAACAG
TTAGCCAAGTTGTGAATGCAAAGGAAAAGTTCTTGAAGGAAATTAAAAGT
GCTACTCCAGTGAACACACGAATGATAAGAAAGCGAAACAGCCTTATTGC
TGATATGGAGAAAGTTTTAGTGGTCTGGATAGAAGATCAAACCAGCCACA
ACATTCCCTTAAGCCAAAGCCTAATCCAGAGCAAGGCCCTAACTCTCTTC
AATTCTGTGAAGGCTGAGAGAGGTGAGGAAGCTGCAGAAGAAAAGTCTGA
AGCTAGCAGAGGTTGGTTCATGAGGTTTAAGGAAAGAAGCCGTCTCCATA
ACATAAAAGTGCAAGGTGAAGCAGCAAGTGCTGATGTAGAAGCTGCAGCA
AGTTATCCAGAAGATCTAGCTAAGATAATTAATGAAGGTGGCTACACTAA
ACAACAGATTTTCAGTGTAGACGAAACAGCCTTCTATTGGAAGAAGATGC
CATCTAGGACTTTCATAGCTAGAGAGGAGA
>rnd-1_family-240#LTR/ERVL ( RepeatScout Family Size = 32, Final Multiple Alignment Size = 32, Localized to 2433 out of 3442 contigs )
TGACCCGCGAGCTGGACCCGGGCAATCGGAGGCTCCTCACCCCTCCCCTG
TCCTTGGAATGTACGTTCCGCCCACCGTTCCCACAGTGGGAGCCGTTTTC
AAGGACGCAGCCTTGAGAGAGTAANGTGTTGTTGAGACCATCTGGACNGN
ATACGTGACTGAACCCAGTTAAGGCCTCTATATAAACTTTTAAGATTCTG
GCGGGCGGGTGCGGAGATCTACTCGTCTTGCGGCCGCCCAAGACAAGCCT
CGTATGTAAGTTCCCTTGCTTATTAAACCTGCCACCTACCAATCTGGAGT
GGTCTGCCTCTTTCTTCGGTCTC
>rnd-1_family-241#Unknown ( RepeatScout Family Size = 30, Final Multiple Alignment Size = 30, Localized to 2433 out of 3442 contigs )
ATCACTGGATCGTTTTTTCAAGAGGGTAGATAGAATTGAATCCAGCAAGG
AACCAGAACCTGTGCCATCAACGTCAGGCGTGAGTGAAATTGCAGCTTGC
CCTCCGTCTCCTATTGCTGACGATCCTTCAGCTCTACCATCTCCCACCTC
CTCTCCCTCCTCCAGTCAGTAACTCTTCTTGCCTGTTCACTCGATGCCAG
CCCCTGTATGCCAGCTGTTGTACTGTACTACTGTACTTTTCAAGGTACTG
TACTGTAAGATTAAAAA
>rnd-1_family-242#LINE/L1 ( RepeatScout Family Size = 29, Final Multiple Alignment Size = 29, Localized to 2433 out of 3442 contigs )
AAATAGANAATCTGAATAGGCCTATATCTATTAAAGAAATTGAATCAGTA
ATTAATAACCTTCCAAAA
>rnd-1_family-243#Simple_repeat ( RepeatScout Family Size = 29, Final Multiple Alignment Size = 29, Localized to 2433 out of 3442 contigs )
CTACTACTACTACTACTACTAGCCCAGTGCATGGCAAATACTACTACTAT
TAC
>rnd-1_family-244#LTR/ERVL ( RepeatScout Family Size = 28, Final Multiple Alignment Size = 28, Localized to 2433 out of 3442 contigs )
AAGTTCCCTTGCTTATTAAACCTGCCACCTACCAATCTGGAGTGGTCTGC
CTCTTTCTTCGGTCTCTCCTTGCCCTCC
>rnd-1_family-245#LINE/L1 ( RepeatScout Family Size = 28, Final Multiple Alignment Size = 28, Localized to 2433 out of 3442 contigs )
GAGGAGAGTACAAATGCAGGATATTNGAAATGCATTTGAAATTAAGAGAC
CAGCAACTTAAAACAATCTTGTATATATATAGACTGCTATATCAAAACCT
CATGG
>rnd-1_family-246#LTR/ERVL ( RepeatScout Family Size = 28, Final Multiple Alignment Size = 28, Localized to 2433 out of 3442 contigs )
TTATGTTAATGAGGTGACTTTTGGAAAGCNCCTAAGGATGGGGGCTGGTT
GCCA
>rnd-1_family-247#DNA/TcMar-Tigger ( RepeatScout Family Size = 28, Final Multiple Alignment Size = 28, Localized to 2433 out of 3442 contigs )
AATATTACTGCTCATTGACAATGCACCTGGTCACCCAAGAGCTCTGATGG
AGATGTACAACGAGATTAATGTTGTTTTCATGCCTGCTAACACAACATCC
ATTCTGCAGCCCATGGATCAAGGAGTAATTTCGACTTTCAAGTCTTATTA
TTTAAGAAATACATTTCGTAAGGCTATAGCTGCCATAGATAGTGATTCCT
CTGATGGATCTGGGCAAAGTAAATTGAAAACCTTCTGGAAAGGATTCACC
ATTCTAGATGCCATTAAGAACATTCGTGATTCATGGGAAGAGGTCAAAAT
ATCAACATTAACAGGAGTTTGGAAGAAGTTGATTCCAACCCTCATGGATG
ACTTTGAGGGGTTCAAGACTTCAGTGGAGGAAGTAACTGCAGATGTGGTG
GAAATAGCAAGAGAACTAGAATTAGAAGTGGAGCCTGAAGATGTGACTGA
ATTGCTGCATGATAAAACTTTAACGGATGAGGAGTTGCTTCTTATGGATG
AGCAAAGAAAGTGGTTTCTTGAGATGGAATCTACTCCTGGTGAAGATGCT
GTGAAGATTGTTGAAATGACAACAAAGGATTTAGAATATTACATAAACTT
AGTTGATAAAGCAGCGGCAGGGTTTGAGAGGATTGACTCCAATTTTGAAA
GAAGTTCTATGGGTAAA
>rnd-1_family-248#DNA/TcMar-Tigger ( RepeatScout Family Size = 27, Final Multiple Alignment Size = 27, Localized to 2433 out of 3442 contigs )
TTTCACTTTCAGTACAGTATTCAATAAATTACATGAGATATTCAACACTT
TATTATAAAATAGGCTTTGTGTTAGATGATTTTGCCCAACTGTAGGCTAA
TGTGTTCTGAGCACGTTTAAGGTAGGCTAGGCTAAGCTATGATGTTCGGT
AGGTTAGGTGTATTAAATGCATTTTCGACTTACGATATTTTCAACTTACG
ATGGGTTTATCGGGACGTAACCCCATCGTAAGTCGAGGAAGATCTGTAT
>rnd-1_family-249#LTR/ERV1 ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
CTCTAACCTTTGTGCTCTGTTGCCTGTGCTTAGTCATGCTGGCTCTGCAC
CTTTGTAAAAGAATGTTGCCTATAGCCTGAAATATACAGGATAGCCCATT
CTCAAGGCTCTG
>rnd-1_family-250#DNA/TcMar-Tigger ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
TACAGTAGTCCCCCCTTATCCGCGGTTTCGCTTTCCGCGGTTTCAGTTAC
CCGCGGTCAACCGCGGTCCGAAAATATTAAATGGAAAATTCCAGAAATAA
ACAATTCATAAGTTTTAAATTGCGCGCCGTTCTGAGTAGCGTGATGAAAT
CTCGCGCCGTCC
>rnd-1_family-251#LTR/ERV1 ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
GGAGCAAAAGCAGGGTACTGCGCATGCCCCCTGCACACAGCACCACCAAA
GGGGTGGGCAGACCACCTAAGCCACCCCTCCGGCCCGACCCCTGGACACA
CCCCTACCCTCACCCCATNTAAGGAACCAGCTCGCCCCCCCTCGGGGAGC
GAAGCAAGGGAACCTGTTACTTGTTCTCGCTCCCCCCTGCTGCAGCAGGG
GCCCCAATAAAGCCTTGCCTGAATTTCTCGTCTGGCCTCTNATCAATTTC
TATTGATTAAGGAAGGCCAAGAACCCTGGTCGGTAACA
>rnd-1_family-252#LTR/ERV1 ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
GCTGGGACCTGGGACCCTTTGCTGCGAGTGCTTGCACCTGGACAAACGTC
TCCTCGAGCAACAAAATACAAAGAAACTATAAGGGACTAAAAATAACTGC
GTGCATGCGCAGTTGGGGCAAATTATGGACCAAAGATACAAAAAGACCAA
AAACCCAACTGCCACTTCTGAAGAGCCNGGAGCAAAAGCAGGGTGTCGGG
AGCAAAAGCAGGGTACTGCGCATGCCCCCTGCACACAACACCACCAAAGG
GGTGGGCAGACCACCTAAGCCACCCCTCCGGCCCGACCCCTGGACACACC
CCTACCCTCACCCCATATAAGGAACCAGCTCGCCCCC
>rnd-1_family-253#DNA/TcMar-Tigger ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
TGTTGTTAATCTCTTACTGTGCCTAATTTATAAATTAAACTTTATCATAG
GTATGTATGTATAGGAAAAAACATAGTATATATAGGGTTCGGTACTATCC
GCGGTTTCAGGCATCCACTGGGGGTCTTGGAACGTATCCCCGCGGATAAG
GGGGGAC
>rnd-1_family-254#LINE/L1 ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
AAAAAATTGTAAAAGCGACTATAACTACAATAAACAGTAAAGGGATAAAC
ATGAAGATGTAAAATANGACATCAAAAACACAAAATGTGGGGGAGGGGAG
TAAAAAATGTAGATCTTTT
>rnd-1_family-255#Unknown ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
AGCAGTACCAGCTACATCACCGCTGCTTTTACGCTTGCTTCCGGACATCC
TGGGCTTGAAATAAAGATACTGTACTACTGTACTCTATACAGTACTGTAC
AGTAAAGTACACAAAAGCACAACCACTTGTAGAGGATGCACGCACGTGAC
AATGTACGCCAGACACGTGAACTAACTTACGTGATTGGACATGCGAACGC
ACGTTCGCATCTTTG
>rnd-1_family-256#Unknown ( RepeatScout Family Size = 26, Final Multiple Alignment Size = 26, Localized to 2433 out of 3442 contigs )
ATCTGGGGGCTTCTACTCCAACAACTNGGGAGCAGACCCCGCCCCCGACA
GGGCGGTGACGGCCACGGAGCAAAGGGGAGGCCCCGCCCAACACCCGGCG
CAGGCTCTGGCCNCCNCAACNCCAGCCACACCCCCTATCAAGGGGATAAC
GGCCAGCACACNCTGAG
>rnd-1_family-258#LTR/ERVL ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 25, Localized to 2433 out of 3442 contigs )
TGTATGGTCAGGCCACTCAAGATGGCTGTTCTCTTGCTCTCTGTACATCC
CCTGCTCGACCAGTCCCTGCTTCACCTACACCCTACTCACATGACTGACC
TTCCTA
>rnd-1_family-259#LTR/ERVL ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 25, Localized to 2433 out of 3442 contigs )
TGTATGGTCAGGCCACTCAAGATGGCTGTTCTCTTGCTCTCTGTACATCC
CCTGCTCGACCAGTCCCTGCTTCACTCACATGACTATCCAATCCTCTTAA
TTATAGGGCTTAATCAGTAACTG
>rnd-1_family-260#LTR/ERVL ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 25, Localized to 2433 out of 3442 contigs )
AGCGAAGACTGCCGCCATGTCCTGCCCGCCGTCCGCCGCACACGGTGGGG
TGTCGCTCCAGGACCTTGCTTCAGACGTGTAAGATCCCCCGTCCANTAAA
CCACTGATGTCTCTGTCGCTGNCTCCGGGCTCTTTCTTCGGTCTCGAGGC
TGG
>rnd-1_family-257#Unknown ( RepeatScout Family Size = 25, Final Multiple Alignment Size = 24, Localized to 2433 out of 3442 contigs )
TTCCTGACATGGCTGGCTGCGGGGTCCGGGGTGTCCCAGAGCTGGTGTCG
GCCCGCTGGTGGGCGGGGCCGGGTCCCGGGG
>rnd-1_family-262#DNA/TcMar-Tigger ( RepeatScout Family Size = 24, Final Multiple Alignment Size = 24, Localized to 2433 out of 3442 contigs )
TGCTCAGAACACTTACATTAGCCTACAGTTGGGCAAAATCATCTAACACA
AAGCCTATTTTATAATAAAGTGTTGAATATCTCATGTAATTTATTGAATA
CTGTACTGAAAGTGAAAAACAGAATGGTTGTNTGGGTACAGAATGGTTGT
AAGTGTATCGGTTGTTTACCCTCGTGATCGCGTGGCTGACTGGGAGCTGC
GGCTCGCTGCCACTGCCCAGCATCATGAGAGAGTATCGTACCGCATATCG
CTAGCCCGGGAAAAGATCAAAATTCAAAATTCGAAGTA
>rnd-1_family-263#Unknown ( RepeatScout Family Size = 24, Final Multiple Alignment Size = 24, Localized to 2433 out of 3442 contigs )
CCCTCCGCTCCTCTCCCGCTCTTCCCGGAGGGTCCCTCCCGCCTGCCTCT
CCCGATCTCCCCGGCCTCAGGGGCGCCGGTCCCGTCCGGCCTCCACTTCT
CCTCCCCCCTCAGTCCCCCCACGTCCTACCGGTTCGCTTGGGGGTTCCTC
CCGTCCCCTTGGGCGTCAGGGTCC
>rnd-1_family-264#DNA/hAT-Charlie ( RepeatScout Family Size = 24, Final Multiple Alignment Size = 24, Localized to 2433 out of 3442 contigs )
CATCACCCCCAGATGGGACCATCTAGTTGCAGGAAAACAAGCTCAGGGCT
CCCACTGATTCTGCATTATGGTGAGTTGTATAATTATTTCATTATATATT
ACAATGTAATAATAATAGAAATAAAGTGCACAATAAATGTAA
>rnd-1_family-261#LTR/ERV1 ( RepeatScout Family Size = 24, Final Multiple Alignment Size = 23, Localized to 2433 out of 3442 contigs )
TTTGTACAGCTCCTCGGAGCTCCTTTCTATCTGCTAGATNGGATGCTGCC
CGATTCATGAATCGTTGAATAAAGCCAATNAGATCTTTAAAATTTA
>rnd-1_family-265#DNA/TcMar-Tigger ( RepeatScout Family Size = 23, Final Multiple Alignment Size = 23, Localized to 2433 out of 3442 contigs )
ACTTACGATGGTTCGACTTAACGATTTTTCGACTTTACGATGGTGCGAAA
GCGATACGCATTCAGTAGAAACCGTACTTCGAATTTTGAATTTTGATCTT
TTCCCGGGCTAGCGATATGC
>rnd-1_family-266#LTR/ERVL ( RepeatScout Family Size = 22, Final Multiple Alignment Size = 22, Localized to 2433 out of 3442 contigs )
TGCCCCANCTGCTGGTTTCCCTGGTAACTGATGAGCCAACCTGACGTCAA
TTCCCCCTATAAATGGTAGCCTCCCCCTCCCC
>rnd-1_family-267#LTR/ERV1 ( RepeatScout Family Size = 22, Final Multiple Alignment Size = 22, Localized to 2433 out of 3442 contigs )
GGTCAAAAGGAGGGAGGAGGCGCCAGTCCATGTGTCCTGCCAACCTCCCA
GAANCCTCCTCGCTGGAATCCATCTTGGCTGAGAGATGCGCGCGCCACCA
GGAAGGACCCTGAGTCAGAATGACTGGCCAGAGACAACCCGGAAACTAAC
CCCATCACCATAAAACCCGAGACTGCGAGCCACGTGGCAGAGCAGTCCTC
CTGGGTTCCCTTACCCTGCTGCTCTCCGCCCGGGCGCCCCTTCCCAATAA
AGTCTCTTGCTTTGTCAGCACGTGTGTCTCCTCGGACAATTCATTTCCGA
GTGTTAGACAAGAGCCCACTCTCGGGCCCTGGAAGGGGTCCCCCTTCCTG
CAACA
>rnd-1_family-268#DNA/hAT-Blackjack ( RepeatScout Family Size = 21, Final Multiple Alignment Size = 21, Localized to 2433 out of 3442 contigs )
TAAATAAAATTATTTGTTAATACTACTAATAAACAATGCTTCAGATGTAT
GAAAACACATANCTTTGAAAAAGTATATCCCAAATACTGCATGGGATATA
CTTGTGCTAAAGACTTTATCAATTAAAATAAAACATTNATTTACTAATNA
TGCTAATAATTAACAAACAATACTTAGATTTTTGTTTTCTTTTA
>rnd-1_family-269#LTR/ERV1 ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2433 out of 3442 contigs )
TATAACTTCCTTGTTCCCGCTCCCTTCTGCCTATAAAAGTCTTTCATTTT
GTACAGCTCCTCGGAGCTCCTTTCTATCTGCTAGATNGGATGCTGCCCGA
TTCA
>rnd-1_family-270#LTR/ERV1 ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2433 out of 3442 contigs )
AGACCACCTGAGGCCAGATTAAAGGAGTGCAGGCCCTGCACACACCCTGA
TCCTTATCAGCAACCCCGCCCTTGAACCATTGCTATAAAACTCCTCACCA
AATCCTCCCGGGTTGGGACACA
>rnd-1_family-271#LTR/ERV1 ( RepeatScout Family Size = 20, Final Multiple Alignment Size = 20, Localized to 2433 out of 3442 contigs )
CATGGTTGCAGACCCCGAATTGCAATTCTCTGCTGATCCCGAATAAACCC
ATCTTTGCTGGAGAAATANCTGGCAGTCTATTTGTTT
>rnd-1_family-273#LTR/ERV1 ( RepeatScout Family Size = 19, Final Multiple Alignment Size = 19, Localized to 2433 out of 3442 contigs )
GGTCCCGCATGCAGAGGCCTCGCACCCGGCACTTCAGACCAGAGTTCCTA
GTGCAGAATGGCTGNGCCGACACCTCAGCTCCTGGGGCCCAGTGCAGACT
CCGCGATATAGAGCCTGA
>rnd-1_family-272#LTR/ERVL-MaLR ( RepeatScout Family Size = 19, Final Multiple Alignment Size = 18, Localized to 2433 out of 3442 contigs )
TAGAAATACGGACGNTAAAGGCCGTTCTGGTGAGGTCTCAGACGGAAATG
AGGAACATGTTATTGGAAACTGGAGGAAAGGCGATCCTTGTTATANAGTG
GCAAAGAACTTGGCTGA
>rnd-1_family-274#DNA/TcMar-Tigger ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2433 out of 3442 contigs )
GCTTGTGTTCAAGTAACCCTTATTTTACTTAATAATGGCCCCAAAGCGCA
AGAGTAGTGATGCTGGCAATTCGGATATGCCAAAGAGAAGCCGTAAAGTG
CTTCCTTTAAGTGAAAAGGTG
>rnd-1_family-275#LTR/ERV1 ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2433 out of 3442 contigs )
TTTCCTGGCAAGGACTCAGCCAATGAAAAGCCATGGACTCTTTGTTTACT
ATAGCCCTCCCAACTTCCTTTTCCCCTCTATAAAAGCGTTCTCCTTCCCT
TGC
>rnd-1_family-276#LINE/L1 ( RepeatScout Family Size = 18, Final Multiple Alignment Size = 18, Localized to 2433 out of 3442 contigs )
CATAAAAACACCCCTTCAAGACCACAGTAGATAACTGTTTCNCCTAAATT
CATAGAGNCAGAGAAAGNTAAGCAAAATG
>rnd-1_family-277#LTR/ERVL-MaLR ( RepeatScout Family Size = 17, Final Multiple Alignment Size = 17, Localized to 2433 out of 3442 contigs )
TGCTGTAACAAATACCTAAAAATGTGGAAGCGGCTTTGGAACTGGGTAAT
GGGTAGAGGCTGGAAGAGTTTTGAGG
>rnd-1_family-278#DNA/TcMar-Tigger ( RepeatScout Family Size = 17, Final Multiple Alignment Size = 17, Localized to 2433 out of 3442 contigs )
AAAAAAAATCGTATGCTGAGGTTGCTAAGATCTACGGTAAGAACGAATCT
TCTATCCGTGAAATTGTGAAGAAGGAAAAAGAAATTCGTGCTAGTTTTGC
TGTCGCACCTCAAACTGCAAAAGTTACGGCCACAGTGCGTGATAAGTGCT
TAGTTAAGATGGAAAAGGCATTAAATTTGTACAATAAGAT
>rnd-1_family-279#LTR/ERV1 ( RepeatScout Family Size = 17, Final Multiple Alignment Size = 17, Localized to 2433 out of 3442 contigs )
ACCTCCTGCCTCGATGATTNACTGAGATTACTTCCCCCTTTTTCCCTTTA
AAAACTTTCATGGCCGAGCAGAATCTTCGGAGTTGGTTTCGGGACACGAG
TCCACCTTCTCCCCAGATTG
>rnd-1_family-280#LTR/ERV1 ( RepeatScout Family Size = 17, Final Multiple Alignment Size = 17, Localized to 2433 out of 3442 contigs )
AGGATAGCAGAGCCCAACAGGAAGAAGAAAGACTCCTCTTCTTTCCTGGC
AAGGACTCAGCCAATGAAAAGC
>rnd-1_family-281#DNA/TcMar-Tigger ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2433 out of 3442 contigs )
ATGCTATCAAACAGCATTGCATGCTACAGAGAAATCGTTCGTGAAAGGAA
GAGTCAAT
>rnd-1_family-282#DNA/hAT-Blackjack ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2433 out of 3442 contigs )
TTTTTTAGTATAAGTATGTCCCAAATATTGCATGGGACATACTTATACT
>rnd-1_family-283#DNA/TcMar-Tigger ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2433 out of 3442 contigs )
GGACGTGAATCATCCCTTTGTCCAGCGTATCCCGCCGTTAGTCACTTAGT
AG
>rnd-1_family-284#LTR/ERV1 ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2433 out of 3442 contigs )
AACAAACAAACAAAACAACTAATACTAAACTTTCTTTGGGTTATTTGTAT
GGAAATATGTTAATATAAATGTTTCAGACATTACATGAAATTTCTAAAAA
TCTTATATGTTCTGGTATAATGTTAT
>rnd-1_family-285#LTR/ERV1 ( RepeatScout Family Size = 16, Final Multiple Alignment Size = 16, Localized to 2433 out of 3442 contigs )
CCCCTTCATGAATATGCATGTACCCTTAGCTTAAAACTTCCCCAATTTTG
CTGTTCGGGGAGACACTGCTTTGGGAAAGATCCCCGGTGTTCTCCTTACT
TGCTGCAAGTATAATAAATCCTTCCTTCTCCC
>rnd-2_family-25#LINE/L1 ( Recon Family Size = 81, Final Multiple Alignment Size = 63 )
AGAGGAACCAAGATGGCGGAGTAGAAGGACGTGCTCTCGCCCCCTCTTGC
GAGAANACNAGAATCACAACTAGCTGCTGGACAATCATTGACAGGAAGAC
ACTGGAACTCACCAAAAAAGATACCCCACATNCAAAGACAAAGGAGAAGN
CACAATGAGACGGNAGGAGGGGCGNAANCACGGTAAAAATCAAATCCCNT
AACCGCTGGGTGGGTGACTCACAGACGGGGGAACANTTATACGACAGAAG
TCCACCCACTGNAGTGAAGGTTCTGAGCNCNACGTCAGGCTTCCCAACCT
GGGGGTCCGGCAACGGGAGGANGAATTCCTAGAGAATCAGACTTTGAAGC
CTAGTGGGANCTGACCGCAGGACTTCGACAGGACTGGGGGAAANAGAGAC
TCCACTCTTGGAGGGCACACACAAAGCAGTGTGCGCATCGGGANCCAGAG
GAGGGANCAGTGACCCCAGGGGAGACTGAACCANACCTACCGGCTAGTGT
TGGNGGGTCTCCTGCAGAGGCGGGGGGGTGGGGGTGGTGGCTNTGGCTCA
CCGTGGGGACAAGGNCACTGGCAGCAGAAGTTCTGGGAAGTANTCCTTGG
CGTGAGCCCCCCCATAGTCTGTCATTAGCCCCACCAAAGAGCCCAGGTAG
GCTCCAGTGCTGGGTTGCCTCAGGCCAAACAACCAACAGGGAGGGAACNC
AGCCCCACCCATCAGCAGACAAGCGNTTTAAAGTTTTACTGAGCTCTGCC
CACCAGAGCAANAGCCAGGCTCTACNCACGACNAGTCCCTCCCATCAGGA
AACTTACACAAGCCTCTTANACAGCCTCATCCACCAGAGGGCAGACAGCA
GAAGCAAGAACTACAATCCTGCAGCCTGTGGAACGAAAACCACATTCACA
GAAAGATAGACAAGATGAAAAGGCAGAGGGCTATGTACCAGATGAAGGAA
CAAGATAAAACCCCAGAAAAACAACTAAACGAAGTGGAGATAGGCAACCT
TCCAGAAAAAGAATTCAGAATAATGATAGTGAAGATGATCCAGGACCTCG
GAAAAAGAATGGAGGCAAAGATCGAGAAGATGCAAGAAATGTTTAACAAA
GACCTAGAAGAATTAAAGAACAAACAAACAGATGAACAATACAATAACTG
AAATGAAAACTACACTAGAAGGAATCAATAGCAGAATAACTGAGGCAGAA
GAACGGATAAGTGACCTGGAAGACAGAATGGTGGAATTCACTGCCGTGGA
ACAGAATAAAGAAAAAAAGAATGAAAAGAAATGAAGACAGCCTAAGAGAC
CTCTGGGACAACATTAAACGCAACAACATTCGCATTATAGGGGTCCCAGA
AGGAGAAGAGAGAGAGAAAGGANCAGAGAAAATATTTGAAGAGATTATAG
TTGAAAACTTCCCTAACATGGGAAAGGAAATAGCCACCNAAGTCCAGGAA
GCGCAGCGAGTCCCANGCGGGATAAACCCAAGGAGAAACACGCCGAGACA
CATAGTAATCAAATTGGCAAAAATTAAAGACAAAGAAAAATTATTGAAAG
CAGCAAGGGAAAAACGACGAATAACATACAAGGGAACTCCCATAAGGTTA
ACAGCTGATTTCTCAGCAGAAACTCTACAAGCCAGAAGGGAGTGGCACGA
TATACTTAAAGTGATGAAAGGGAAGAACCTACAACCAAGATTACTCTACC
CGGCAAGNATCTCATTCAGATTCGAAGGAGAAATCAAAAGCTTTACAGAC
AAGCAAAAGCTAAGAGAATTCAGCACCACCAAACGAATTCAGCTCTACAA
CAAATGCTAAAGGAACTTCTCTAAGTGGGAAACACAAGAGAAGAAAAGGA
CCTACAAAAACAAACANAAAACAATAANAAAATGGTAATAGGAACATACA
TATCGATAATTACCTTAAACGTGAATGGATTAAACGCTCCGATCAAAAGA
CANAGGCTNGCTGAATGGATACAAAAACAAGACCCACATATATGCTGTCT
ACAAGAGACCCACTTCAGACATAGGGACACATACAGACTGAAAGTGAGGG
GATGGAAAAAGATATTCCATGCAAATGGAAATCAAAAGAAAGCTGGAGTA
GCTATACTAATATCAGATAAAATAGACTTCAGAACAAAGAACGTTACNAG
AGACAAGGAAGGACACTACATAATGATAAAAGGATCAATCCAAGAAGAAG
ACATAACAATTATAAACGTATATGCACCCAACATAGGAGCGCCTCAATAC
ATAAGGCAAANGNTAACAGCTNTAAAAGAAGAAATTGACAGTNACACAAT
AATAGTGGGGGACTTTAACACCTCACTTACACCAACGGACAGANCATCAG
ANAGAAAATNAATTAAGGANATCAGAAGATCTAAACGACACAATAGACCA
GATAGATTTAATTGACATTTATAGGACACTCCACCCAAAAACAGCAGATT
ACACTTTCTTCTCAAGTGCGCACGGAACATTCTCCAGGATAGACCACATC
CTGGGCCACAAANCAAGCCTCAATAAATTTAAAAAAATTGAAATCATATC
AAGCATCTTCTCCGACCACAACGGNATGAGATTAGAAATCAATTACAGGG
AAAAAACGTAAAAAACACAAACACATGGAGACTAAACAATACGCTACTAA
ATAACCAACAGATCACTGAAGAAATCAAAGAGGAAATCAAAAAATACCTA
GAGACAAATGANAATGAAAACACGACGATCCAAAACCTATGGGACGCAGC
AAAAGCAGTNCTAAGAGGGAAGTTTATAGCNATACAAGCCTACTTCAAGA
AACAAGAAAAATCTCAAATAAACAATCTAACCTTACACCTAAAGGAACTA
GAGAAAGAAGAGCAAACAAAACCCAAAGTTAGCAGAAGGAAAGAATNATA
AAGATCAGAGCAGAAATAAATGAAATAGAAACAAAGAAAACAATAGCGAA
GATCAATAAAACTAAAAGCTGGTTCTTTGAGAAGATAAACAAAATTGATA
AACCNTTAGCCAGACTCATCAAGAAAAAGAGGGAGAGGACTCAAATCAAC
AAAACTAGAAATGAAAAAGGAGAAGTTACAACGGACACCGCAGAAATACA
AAGCATCNTAAGAGACTACTACGAGCAACTCTATGCCAATAAANTGGACA
ACCTGGAAGAAATGGACAAATTCCTAGAAAGGTATAACCTTCCAAGACTG
AACCAGGAAGAAATAGAAAATNTGAACAGACCAATCACAAGCAATGAAAT
TGAANCTGTGATNAAAAATCTTCCAACAAACAAAAGTCCAGGACCAGATG
GCTTCACNGGNGAATTCTATCAAACATTTAGAGAAGAGCTAACACCCATC
CTTCTCAAACTCTTCCAAAAAATTGCGGAGGAAGGAACACTCCCAAACTC
ATTCTATGAGGCCACCATCACCCTGATACCAAAACCAGACAAAGATACTA
CAAAAAGAGAAAATTACAGACCAATATCACTGATGAATATAGATGCAAAA
ATCCTCAACAAAATACTAGCAAACAGAATCCAACAACACATTAAAAGGAT
CATACACCATGATCAAGTGGGATTTATCCCAGGGATGCAAGGATTCTTCA
ATATACGCAAATCAATCAATGTGATACACCATATTAACAAATTGAAGAAA
TAAAAACCATATGATCATCTCAACAGATGCAGAAAAAGCTGCACAAAATT
CAACACCCATTTATGATAAAAACTCTCCAGAAAGTGGGCATAGAGGGAAC
CTACCTCAACATAATAAAGGCCATATACGACAAACCCACAGCAAACATCA
TTCTCAATGGTGAAAAACTGAAAGCATTTCCTCTAAGATCAGGAACAAGA
CAAGGATGTCCACTCTCACCACTNTTATTCAACATAGTTTTGGAAGTCCT
AGCCACGGCAATCAGAGAAGAAAAAGAAATAAAAGGAATACAAATTGGAA
AAGAAGAAGTAAAACTGTCACTGTTTGCAGATGACATGATACTATACATA
GAAAATCCTAAAGATGCCACCAGAAAACTACTAGAGCTAATCAATGAATT
TGGTAAAGTTGCAGGATACAAAATTAATGCACAGAAATCTCTTGCATTCC
TATACACTAACGATGAAAAATCAGAAAGAGAAATTAAGGAAACACTCCCA
TTTACCATCGCAACAAAAAGAATAAAATACCTAGGAATAAACCTACCTAA
GGAGGCGAAAGACCTGTACTCAGAAAACTATAAGACACTGATGAAAGAAA
TCGAAGATGACACAAACAGATGGAGAGATATACCATGTTCTTGGATTGGA
AGAATCAATATTGTGAAAATGACTATACTACCCAAAGCAATCTACAGATT
CAATGCAATCCCTATCAAATTACCAATGGCATTTTTCACAGAACTAGAAC
AAAAAATCTTAAAATTTGTATGGAGACACAAAAGACCCCGAATAGCCAAA
GCAATCTTGAGGAAAAAAAACGGAGCTGGAGGAATCAGACTCCCTGACTT
CAGACTATACTACAAAGCTACAGTAATCAAGACAGTATGGTACTGGCACA
AAAACAGAAATATAGATCAATGGAACAGGATAGAAAGCCCAGAGATAAAC
CCACGCACCTATGGTCAACTAATCTATGACAAAGGAGGCAAGGATATACA
ATGGAGAAAAGACAGTCTCTTCAATAAGTGGTGCTGGGAAAACTGGACAG
CTACATGTAAAAGAATGAAATTAGAACACTCCCTAACACCATACACAAAA
ATAAACTCAAAATGGATTAAAGACCTAAATGTAAGACCGGACACTATAAA
ACTCTTAGAGGAAAACATAGGCAGAACACTCTTTGACATAAATCACAGCA
AGATCTTTTTGACCCACCTCCTAGAGTAACGGAAATAAAAACAAAAATAA
ACAAATGGGACCTAATNAAACTTAAAAGCTTTTGCACAGCAAAGGAAACC
ATAAACAAGANGAAAAGACAACCCTCAGAATGGGAGAAAATATTTGCAAA
CGAAGCAACGGACAAAGGATTAATCTCCAAAATATACAAACAGCTCATGC
AGCTCAATATCAAAAAAACAAACAACCCAATCAAAAAATGGGCAGAAGAC
CTAAATAGACATTTCTCCAAAGAAGACATACAGATGGCCAAGAGGCACAT
GAAAAGATGCTCAACATCACTAATTATTAGAGAAATGCAAATCAAAACCA
CAATGAGGTATCACCTCACACCNGTTAGAATGGCCATCATCAAAAAATCT
ACAAACAACAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACCCTCNTGCA
CTGTTGGTGGGAATGTAAATTGGTGCAGCCACTATGGAAAACAGTATGGA
GGTTCCTCAAAAAACTAAAAATAGAACTACCATATGATCCAGCAATCCCA
CTNCTGGGCATATACCCAGAGAAAACCATAATTCGAAAAGACACATGCAC
CCCAATGTTCATTGCAGCACTATTTACAATAGCCAAGACATGGAAGCAAC
CTAAATGTCCATCGACAGATGAATGGATAAAGAAGATGTGGTACATATAT
ACAATGGAATATTACTCAGCCATAAAAAGGAACGAAATTGNGTCATTTGT
AGAGACGTGGATGGACCTAGAGACTGTCATACAGAGTGAAGTAAGTCAGA
AAGAGAAAGACAAATACCGTATATTAACGCATATATGTGGAATCTAGAAA
AATGGTACAGATGAACCTATTTGCAAGACAGAAATAGANNCACAGACGTA
GAGAACGAACTTATGGNCACCAAGGGGGAAAGGGGGGGGTGGGGAGGGAT
GAATTGGGAGATTGGGATTGACATATACACACTACTATGTATAAAATAGA
TAACTAACGAGAACCTGCTGTATAAAAAAATAAATAAAATAAAATTCAAA
AAAA
>rnd-2_family-12#LINE/L1 ( Recon Family Size = 44, Final Multiple Alignment Size = 36 )
GCCGTGTGGCTGACAGGGTCTTGGTGCTCCGGCCGGGTGTCAGGCCTGTG
CNTCTGAGGTGGGAGAGCCGAGTTCAGGACATTGGTCCACCAGAGACCGC
CCAGCTCCACGTAATATCAAACGGCAAAAGCTCTCCCAGAGATCTCCATC
TCAACGCCAAGACNCAGCTCCACTCAACGACCAGCAAGCTACAGTGCCGG
ACACCCTATGCCAAACAACTAGCAAGACAGGAACACAACCCCACCCATTA
GCAGAGAGGCTGCCTAAAATCATAATAAGGTCACAGACACTCCAAAACAC
ACCACCGGACGCGGTCCTGCCNACCAGAAAGACAAGATCCAGCCTCATCC
ACCAGAACACAGGCACTAGTCCCTCCACCAGGAAGCCTACACAACCCACT
GAACCAACCNTAGCCACTGGGGGNAGACACCAAAAACAACGGGAACTACG
AACCTGCGAAAAGGAGACCCCAAACACAGTAAGTTAAGCAAAATGAGAAG
ACAGAGAAACACACAGCAGATGAAGGAGCAAGGTAAAAACCCACCAGACC
AAACAAATGAAGAGGAAATAGGCAGTCTACCTGAAAAAGAATTCAGAATA
ATGATAGTAAAGATGATCCAAAATCTTGGAAATAGAATGGAGAAAATACA
AGAAACGTTTAACAAGGACCTAGAAGAACTAAAGAGCAAACAAACGATGA
GAACAACACGATAAATGAAATTAAAAATTCTCTAGAAGGAATNAATAGCA
GAATAACTGAGGCAGAAGAACGGATAAGTGACCTGGAAGATAAAATAGTG
GAAATAACTACTGCAGAGCAGAATAAAGAAAAAAGAATGAAAAGAATTGA
GGACAGTCTCAGAGACCTCTGGGACAACATTAAATGCACCAACATTCGAA
TTATAGGGGTNCCAGAAGAAGAAGAGAAAAAGAAAGGGACTGAGAAAATA
TTTGAAGAGATTATAGTTGAAAACTTCCCTAATATGGGAAAGGAAATAGG
TAATCAAGTCCAGGAAGCACAGAGAGTCCCATACAGGATAAATCCAAGGA
GAAACACGCCAAGACGCATATTAATCAAACTATCAAAAATTAAATACAAA
GAAAAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACATNCAAGGG
AATCCCCATAAGGTTAACAGCTGATCTTTCAGCAGAAACTCCGCAAGCCA
GAAGGGAGTGGCAGGACATATTTAAAGTGATGAAAGGGAAAANCCTACAA
CCAAGATTACTCTACCCAGCAAGGATCTCATTCAGATTCGACGGANAAAT
TAAANCCTTTACAGACAAGCAAAAGCTAAGAGAATTCAGCACCACCAAAC
CAGCTTTANAACAAATGCTAAAGGAACTTCTCTAGGNAGGAAACACAAGA
GAAGGAAAAGACCTACAATAACGAACNCAAAACAATTAAGAAAATGGTAA
TAGGAACATACATATCGATAATTACCTTAAATGTAAATGGATTAAATGCT
CCAACCAAAAGACATAGACTGGCTGAATGGATACAAAAACAAGACCCGTA
TATATGCTGTCTACAAGAGACCCGCTTCAGACCCGGGGACACATACAGAC
TGAAAGTGAGGGGATGGAAAAAGATATTCCGTGCAAATGGAAATCAAAAG
AAAGCTGGAGTAGCAATTCTCATATCAGACAAAATAGACTTTAAAATAAA
GACTATTACAAGAGACAAAGAACACTACATAATGATCAAGGGATCGATCC
AAGAAGAAGATATAACAATTGTAAATATTTATGCACCCAACATAGGAGCA
CCTCAATACATAAGGCAAATGCTAACAGCCATAAAAGGGGAAATCGACAG
TAACACANTCATAGTAGGGGACTTTAACACCCCACTTTCACCAATGGACA
GATCATCAAAATGAAAATAAATAAGGAAACACAAGCTTTAAATGATACAT
TAAACAAGATGGACTTGATATTTATAGGACATTCCATCCAAAAACAACAG
AATACACTTTCTTCTCAAGTGCTCATGGAACATTCTCCAGGATAGATCAT
ATCTTGGGTCACAAATCAAGCCTTGGTAAATTTAAGAAAATTGAAATCGT
ATCAAGTATCTTTTCCGACCACAACGCTATGAGACTAGATATCAATTACA
GGAAAAAAACTGTAAAAAATGCAAACACATGGAGGCTAAACAATACACTA
CTTAATAACCAAGAGATCACTGAAGAAATCAAAGAGGAAATCAAAAAATA
CCTAGAAACAAATGACAATGAAAACACGACGACCCAAAACCTATGGGATG
CAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATACAATCCTACCTT
AAGAAACAAGAAACATCTCAAATAAACAACCTAACCTTACACCTAAAGCA
ATTAGAGAAAGAAGAACAAAAAAACCCCAAAGTTAGCAGAAGGAAAGAAA
TCATAAAGATCAGATCAGAAATAAATGAAAAAGAAATGAAGGAAACGATA
GCAAAGATCAATAAAACTAAAAGCTGGTTCTTTGAGAAGATAAACAAAAT
TGATAAACCATTAGCCAGACTCATCAAGAAAAAAGGGAGAAGACTCAAAT
CGATAGAATTAGAAATGAAAAAGGAGAAGTAACAACTGACACTGCAGAAA
TACAAAGGATCATGAGAGATTACTACAAGCAACTATATGCCAATAAAATG
GACAACCTGGAAGAAATGGACAAATTCTTAGAAAAGCACAACCTTCCGAG
ACTGAACCAGGAAGAAATAGAAAATATAAACAGACCAATCACAAGCACTG
AAATTGAAACTGTGATTAAAAATCTTCCANCAAACAAAAGCCCAGGACCA
GATGGCTTCNCAGGCAAATTCTATCAAACATTTAGAGAAGAGCTAACACC
TATCCTTCTCAAACTCTTCCAAAATATAGCAGAGGGAGGACACTCCCAAA
CTCCTGCGAGACCACCATCACCCTGATACCAAAACCAGACAAAGATGTCA
CGAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAAA
TCCTCAACAAAATACTAGCAAACAGAATCCAACAGCACATTAAAAGGATC
ATACACCATGGTCAAGCGGGGTTTATCCCAGGAATGCNAGGATTCTTCGA
TATACGNAAATCAATCAATGCGATACACCATGTTAACAAACTGAAGGAAA
AAACCATATGATCATCTCAATAGATGCAGAAAAAGNTTTCGACAAAATTC
AGCACCCATTTATGATAAAAACCCTNCAGAAAGTAGGCATAGAGGGAACT
TACCTCAACATAATAAAGGCCATATATGACAAACCACAGCCGACATCGTT
CTCAATGGTGAAAAACTGAAACCATTTCCACTAAGATCAGGAACAAGACA
AGGTTGCCCACTCTCACCACTATTATTCAACATAGTTTTGGAAGTTTTAG
CCACAACAATCAGAGAAGAAAAGAAATAAAAGGAATCCAAATCGGAAAAG
AAGAAGTAAAGCTGTCACTGTTTGCAGATGACATGATACTACACATAGAG
AATCCTAAAGNCGCTACCAGAAAACTACTAGAGCTAATCAATGAATTTGG
TAAAGTAGCAGGATACAAAATTAATGCACAGAAATCTCTTGCATTCCTAT
ACACTAATGATGAAAAATCTGAAAGTGAAATTAAGGAAACACTCCCATTT
ACCATTGCAACAAAAAGAATAAAATACCTAGGAGTAAACCTACCTAAGGA
GACAAAAGACCTGTANGCAGNAAACTATAAGACACTNATGAAGGAAATTA
AAGATGATACAAACAGATGGAGAGATNTACCATGTTCTTGGATTGNAAGA
ATCAACATTGTGAAAATGNNTANACTACCCAAAGCAATCTACAGATTCAG
TGCAATCCCTATCAAACTACCAATGGCATTTTTCACAGAACTAGANCAAA
AANTTTCACAATTTGTATGGAAACACAAAAGACNCCGAANAGCCAAAGCA
ATCTTGAGAAAGAAAAACGGAGCTGGAGGAATCAGGCTCCCTGACTTCAG
ACTATACTACAAAGCTACAGTAATCAAGACAGTATGGTACTGGCACAAAA
ACAGAAATATAGATCAATGGAACAGGATAGAAAGCCCAGAGATAAANCCA
CGCACATATGGTCACCTTATTTTTGATAAAGGAGGCAAGAATATACAATG
GAGAAAAGACAGCCTCTTCAATAAGTGGTGCTGGGAAAACTGGACAGCTA
CATGTAAAAGAATGAAATTAGAACGCTCCCTAACACCATACACAAAAATA
AACTCAAAATGGATTAAAGACCTAAATGTAAGGCCAGACACCGTCAAACT
CTTAGAGGAAAACATAGGCAGAACANTCTATGACATAAATCACAGCAAGA
TCCTTTTTGACCCACCTCCTAGAGAAATGGAAATAAAAACAAAAATAAAC
AAATGGGACCTAATGAAACTTAAAAGCTTTTGCGCANCAAAGGAAACCAT
AAGNAAGACGAAAAGACAACCCTCAGAATGGGAGAAAATATTTGCAAATG
AAGCANCTGACAAAGGATTAATCTCCAAAATATACAAGCAGCTCATGCAG
CTCAATATCAAAAAAACAAANAACCCAATCCAAAAATGGGCGGAAGACCT
AAATAGACATTTCTCCAAAGAAGATATACAGATGGCCAANAAGCACATGA
AAGGATGCTCAACGTCACTAATCATTAGAGAAATGCAAATCAAAACTACA
ATGAGGTATCACCTCACACCGGTCAGAATGGCCATCATCAAAAAATCTAC
AAACAATAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACCNTCTTGCACT
GTTGGTGGGAATGTAAATTGATACAGCCACTATGGAGAACAATATGGAGG
TTCCTTAAAAAACTAAAAATAGAACTACCATACGACCCAGCAATCCCACT
ACTGGGCATATACCCTGAGAAAACCATAATTCAAAAAGAGCCATNTACCA
CAATGTTCATTGCAGCTCTATTTACAATAGCCAGGANATGGAAGCAACCT
AAGTGTCCATCGACGGATGAATGGATAAAGAAGATGTGGCACATATATAC
AATGGAATATTACTCAGCCATAAAAAGAAACGAAATTGAGTTATTTGTAG
TGAGGTGGATGGACCTAGAGTCTGTCATACAGAGTGAAGTAAGTCAGAAA
GAGAAAAACAAATACCGTATGCTAACACATATATATGGAATCTAAAAAAA
AAAAGAAAATGGTTCTGAAGAACCTAGGGGCAGGACAGGAATAAAGACGC
AGACGTAGAGAATGGACTTGAGGACACGGGCTGGGACGAAGTGAGAGAGT
GGCATGGACATATATACACTACCAAATGTAAAATAGATAGCTAGTGGGAA
GCAGCCGCATAGCACAGGGAGATCAGCTCGGTGCTTTGTGACCACCTAGA
GGGGTGGGATAGGGAGGGTGGGAGGGAGACGCAAGAGGGAGGAGATATGG
GGATATATGTATACGTATAGCTGATTCACTTTGTTATACAGCAGAAACTA
ACACANCATTGTAAAGCAATTATACTCCAATAAAGATGTTAAAAAAAAAA
AAAAGAGTCACAAAAGNTTCCACCAAATGCTCATNGCAGCNCTATTTACG
AGAGCCAAAATNTGGAANCAACCTAAGTGTCCATCGACGGATGAATGGAT
AAAGATGTGGCACGTATAGCAGTGAATATTATTCAGCCATAAAAAGAATG
AAATCTTGCCATTTGCAACAACGTGGATGGACCTTGAGAGTATCATGCTN
AGTGAAATAAGTCAGACAGAGAAAGACAAATACCGTATGATATCACTTAT
ACGTGGAATCT
>rnd-2_family-78#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
ATACACACAAATTTGACCACCCNCCTCTCCTTGCCTCTCCATCTCCACCC
TTCCAGTCCGAGCCACCATCNTCTCTCACCTGGACCACGGCAGCAGCCTC
CTACTGGTCTCCCGCTTCCGCTNCCGTCTCCTCCAGTCCATTCTCCACGA
GCGGCAGCCGGAGGGATCTTTTAAAAACAAATCANCCANGTCGGNCCCNG
TTTAAGCCTCCCAACAGCTTCCCATCGCCTCAATCNGANTAAAAGTCTAC
TCNCCCTATTCTCCCCACGGGGCCCTGCACAAATTACCCCCATTCTNTCT
CCCTCAACCTTCTCCTGTCTCCCNCTCACNCACTCTGCTCCAGCCGCACT
GGCCTCTTTGCTGTTCCTTNAACACGCCAAGCTCTTCGCCCAGGGCCTTT
GCCCGCTGTCCCGCTTCCTGGANCACTCTTCTCCCAAGATCTGCATGTCC
TGCCGCCCGCTTCCTGGNCTTCCANCCAGTATACCAGCAACTTCATNACT
CCCTATCCTCCTATGCCCTGATTATTTTTCTCCTTTGTNCTTANTACTAC
CTGTAACGTACAATCTGTTTNTTTATTTGTTTTNTTGTCTGTCTCCCCGC
TAGAATGTAAGCTCCGTGAGGGCAGGGACTTTGCCTGTCTTGTTCGCTGC
TGTATCCCCAGCGCCTAGAACAGNGCCTGGCACATAGTAGGCGCTCNATA
AATATTTGTTGAATGAAAGAACAAGAGAC
>rnd-2_family-48#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 26 )
CCTCTTTTCTCACACCCCACCTAATCCATCAGCAAATCCCGTTGGCTCTG
CCTTCAAAATATATCCGGAATCCGACCACTTCTCACCACCTCTCTCTCCA
CTCTGGTCCGAGCCACCATCNTCTCTCACCGGATACTGCAGTCTCCTCCT
TCTACTCTNGCCCCCTNCAGTCTATTCTCAATACAGCAGCCAGAGTGANC
CTGTTAAAGCANAAGTCAGATCATGTCNCTCCTCTGCTCAAAACCCTCCA
ATGGCTCCCATCTCACCAGAGTAAAAGNCAAAGTCCTTNNAATGGCCTAT
GGGNCCTGCAAGCGNAGTCCTCCCTTATCTCTCTGACTTCATCTCCCACT
TCTCTCTTCACTCCGCGCCGACACTGACCTCCTTGCTNTTCCTCGAACGT
GNCAAGCGCACGCCCACCTCAGGGCCTTTGCACTTGCTGTTCCCTCTGCC
CGGAACGCTCTTTCCCCAGATACCCGCATGGCTCNCTCCCTCACCTCCTT
CAGGTCTGCTCAAATGTCACCTTCTCAGTGAGCCCNCTCTGACCGCACCT
TACACACTCTGTATCNTCCTCTCTGCTTTATTTTCTTCGTAGCACTTATC
ACCATCTAATACTATATATTTTACTTATTTACTTGTTTATTGTCTTCTCC
CCCACTAGAATGTNAGCTCCAAGGGCAGGGACTTTGCCTGTTTTGNNCAC
CGCTGTATCCTCAGTGCCTAGAAGGCTACNTGGAGCGTCCAGCGGNTGCT
CNGTAAATATGCGA
>rnd-2_family-85#LTR/ERVL-MaLR ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
GCCTGAATACGGCCCCCCGAGACATCCTGGTCCCCGGAACCTGTGAATGT
GTCACCTTACGCGGNAAAAGGACTTTGCAGATGTGATTAAGTTAAGGNCT
TTGGGATGGGAGATNACCCTGGGCTATCCGGGTGGGCCCAGTGTCATCAC
AGGGTCCTTNAAAGNGGAGAGCCAGCGGGGAGAGACGCAAAGAGAGGGAC
AGGAGATGCTGTGCTACCGGCTTTGAAGATGGAGGANGGGGCCACGAGCC
AAGGAATGCNGGCAGCCGCCAGAAGCTGGAAGAGGCAAGGAACAGATTCT
CCCCTAGAGCCTCCAGAAAGGAACGCAGCCCTGCCGACACCTTGATTTTA
GCGAGACCTTGGACTTCCGGCCTCCAGAACTGTGAGAGAATAAATTTCTG
TTGTTTTAAGCCACCCAGTTTGTGGTAATTTGTTACGGCAGCAATACA
>rnd-2_family-20#SINE/MIR ( Recon Family Size = 20, Final Multiple Alignment Size = 15 )
CAAACCCTCATCAGCTGTGTGACCTTGGGCAAGCCACTNAACCTCTCTGN
GCCTCAGTTTCCTCATCTGCAAAATGGGGATAATATACCCACCTCNCGGG
GTGTTGTGAGGATTAAAGTTAAGACGCAGNGAAGAGCTNAGCACAAAACA
GGCGCCCAGTNCACTGTGAGCTATTAGACATGTGTTAG
>rnd-2_family-17#SINE/MIR ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
TGCATCTAGGNCTCTGAAAAGGCAGNCCTTGTAAAGAGCACGGACTCTGG
AGACAGGCCTGGNTTCGATCCCGGCTCCGTCACTNACTNGCTGTGTGACC
TTGGGCAAGTNACTTAACTTCTCTGAGCCTCGGTTTCCTCATCTGTAAAG
NAGGGGNAATAATACCTAACTTCCAGGTGCATGTGAGGACGAAAAGAGAA
GTAACTCCCNGAACCCGGTGTACAGGGAATAACAAGCAT
>rnd-3_family-19#LINE/L1 ( Recon Family Size = 97, Final Multiple Alignment Size = 73 )
TGAAAATGAAATATCTGAAAGAGAANTTAAGAAAAAATCCCATTTACCAT
CGCATCAAAAAGAATAAAATACCTAGGAATAAATCTAACTAAGGAGGTAA
AAGACCTGTACTCGGAAAACTATAAGACACTGATGAAAGAAATCAAAGAC
GACACAAACAGATGGAGAGATATACCATGTTCNTGGATTGGAAGANTCAA
TATTGTNAAAATGNCNATACTACCCAAAGCAATCTACAGATTCAATGCAA
TCCCTATCAAANTACCAATGGCATTTTTCACAGAACTAGAACAAANAATT
CTAAAATTTGTATGGAAANACAAAAGACCCCGAATAGCCAAAGCAATCTT
GAGAAAGAAGAACGGAGCTGGAGGAATCAGGCTCCCCGACTTCAGACTAT
ACTACAAAGCTACAGTNATCAAGACAGTATGGTACTGGCGCAAAAACAGA
ACTATAGATCAATGGAACAGGATAAGAGAGCCCAGAAATAAACCCACGCA
CATATGGTCAATTAATCTATGACAAAGGAGGCAAGAATATACAATGGAGA
AAAGACAGNCTCTTCAATAAATGGTGCTGGGAAAACTGGACAGCTACATG
CAAAAGAATGAANCTAGAACACTCCCTNACACCATACACAAAAATAAACT
CAAAATGGATTAAAGACCTAAATGTAAGACCNGAAACTATAAAACTCTTA
GAAGAAAACATAGGCAGAACACTCTCTGACATAAGTCGCAGCAATATCTT
TTTNGATCCGNCTCCTAGGGCAACGGAAACAAAAGCAAAAATAAACAAAT
GGGACCTAATCAAACTTAAAAGCTTTTGCACAGCAAAGGAAACCATNAAC
AAAACGAAAAGACAACCCACAGAATGGGAGAAAATATTTGCAAANGATAC
ANCCGACAAAGGATTAATATCCAAAATATACAAANAGCTCATACAGCTCA
ATANCAAAAAAACAAACAACCCAATCAAAAAATGGGCAGAAGACCTAAAT
AGACATTTCTCCAAAGAAGACATACAGATGGCCAATAGGCACATGAAAAG
ATGCTCAACATCACTAATCATCAGAGAAATGCAAATCAAAACCACAATGA
GATATCACCTCACACCNGTCAGAATGGCCATCATCAAAAAGTCTACAAAC
AACAAATGCTGGNGAGGATGTGGAGAAAAGGGAACCCTCNTGCACTGTTG
GTGGGAATGTAAATTGGTACAGCCACTATGGAAAACAGTATGGAGGTTCC
TTAAAAAACTAAAAATAGAACTACCATATGACCCAGCAATCCCACTCCTG
GGCATATACCCGGAGAAAACCATAATTCAAAAAGANACATGCACCCCAAT
GTTCATNGCAGCNTTATTTACAATAGCCAAGACATGGAAGCAACCTAAAT
GTCCATCGACAGATGAATGGATAAAGAAGATGTGGTACATATATATACAA
TGGAATATTACTCAGCCATAAAAAGGAACGAAATCGNGCCATTTGCAGCG
ACGTGGATGGACCTAGAGACTGTCATACTAAGTGAAGTAAGTCAGACAGA
GAAAGACAAATACCGTATGATATCGCTATATGTGGAATCTAAAAAAATGA
TACAGATGAACTTATTTACAAAACAGAAACAGAGNCACAGACGTAGAACA
GACTTATGGNTACCAGGGGGGGAAGGGGGGGGTGGGATAAATTGGGAGNT
TGGGATTGACATATATACACTACTATATATAAAATAGATAACCAACGAGA
ACCTACTGTATAGCACAGGGAACTCTACTCAATGCTCTGTGATAACCTAA
ATGGGAAAGAAATCCGAAAAAGAGGGGATATATGTATATGTATAACTGAN
TCACTTTGCTGTACAGCNGAAACTAACACAACATTGTAAATCAACTATAC
TCCAATAAAAAAATTTTAAAAAAGTAATAAAGT
>rnd-3_family-131#LINE/L1 ( Recon Family Size = 47, Final Multiple Alignment Size = 43 )
GAGGGGCAGGGGATGTTAAGAGCGCTGCTTAAAGGAGCTNCAGNNACGGG
CAAGAAGCCTGTGTGCGAGCANAGGTCACTATCCACGCCTCCCCTCCCGG
GAGCCTGTGCAGCCCGCNACTGCCAGGGTCCCGNGACCCANGGACAACTT
CCCCAGGAGAACGCATGGTGCGCCTCAGNCTGGTGCAACGTCATGCCGGC
CTCTGCCGCNGCAGGCCCGCCCCGCATTCCGTGNCCCTCCCTCCCCCCGG
CCTGGGTGAGCCAGAGCCCCCNAATCGGCGGCTNCTTTAACCCCGTCCTG
TCTGAGCGAAGAACAGACGCCCTCNGGTGACCTACACGCAGAGGCGGGGC
CAAATCCAAAGCTGAGCCCCTGGGAGCTGTGNGAACAAAGAAGAGAAAGG
NAAACCTCTCCCAGCAGCCTCAGGAGCAGCGGATTAAANCTCCACAACCA
ACTTGATGTACCCTGCATCTNCGGAATACCTGAATAGACAACGAATCATC
CCAAATTGAGGAGGTGGACTTTGAGAGCAATGATTTATGATTTTTTCCCC
TTTCCTCTTTTTGTGAGTGTGTATGTGNATGCTTCTNTGTGNGATTTTGT
CTGTATAGCTTTGCTTCCGCCATTTGTCCTAGGGTTCTATCCGTCCGTGT
GTTTTTTTTTTTTAATTTTTTTCTTAATAATTGTTTTTTAATTTANTAAC
TTTATTATATTTTGTCTTACTTTATTTTACTTTATCTTCTTTCTTTTTTT
TCCTTCCCTTCCTTCCTTCCTTCCTACCATCCCTCCTTTCTAATTNTTTC
TTNNTTTTAGCTTTNTTTCATTTTCTACTTCTGCTANTTCTTTCTTTCTA
TTTTTCTCCCTTTTATTCTGAGCCGCGTGGATGAAAGGCTCTTGGTGCTG
CGGCCGGGAGTCAGTGCTGTGCCTCTGAGGTGGGAGAGCCAACTTCAGGA
CACTGGTCCACAAGAGACCTCCCAGCTCCACATAATATCAAACGGCGAAA
ATCTCCCAGAGATCTCCATCTCAACACCAGCACCCAGCTTCACTCAACGA
CCAGCAAGCTACAGTGCTGGACATCCTATGCCAAACAACTAGCAAGACAG
GAACACAACCCCACCCATTAGCAGAGAGGCTGCCTAAAATCATAATAAGT
CCACAGACACCCCAAAACACACCACCAGACGCGGACCTGCCCACCAGAAA
GACAAGATCCAGCCTCATCCACCAGAACACAGGCACTAGTCCCCTCCACC
AGGAAGCCTACACAACCCACTGAACCAACNTTAGCCACTGGGGACAGACA
CCAAAAACGACGGGAACTACGAACCTGCAGCCTGCGAAAAGGAGACCCCA
AACACAGTAAGATAAGCAAAATGAGAAGACAGAAAANACACACAGCAGAT
GAAGGAGCAAGGTAAAAACCCACCAGACCNAACAAATGAAGAGGAAANNG
GCAGTCTNCCTGAAAAAGAATTCAGNGTAATGATAGTAAAGATGANCCAA
AATCTTGGAAANAGAATAGANAAAATGCAAGAAACGTTTAACAAGGACCT
AGAAGAACTAAAGANNAAACAAACAACGATGAACAACACAATAAATGAAA
TCAAAAGTNCTCTAGANGGGATCAATAGCAGAATAACTGAGGCAGAAGAA
CGGATAAGTGACCTGGAAGATAAAATAGTGGANATAACNACTGCAGAGCA
GAATAAANANAAAAGAATGAAAAGAACTGACGACAGTCTCAGAGACCNCT
GGGACAACATTAAACGNAACAACATTCAAATTACAGGGGTCCCAGAGGAA
GAAGANAAAAAGAAAGGGACTGAGAAAAATATTTGAAGAGATTATAGTTG
AAAACTTCCCTAATATGGGAAAGGAAATAGTCAATCAAGTCCAGGAAGCG
CAGAGAGTCCCATACAGGATAAATCCAAGGAGAAACGCGCCAAGACACAT
ATTAATCAAACTATCAAAAATTAAATACAAAGAAAAAATATTAAAAGCAG
CAAGGGAAAAACAACAAATAACACACAAGGGAATCCCCATAAGGTTAACG
GCTGATCTTTCAGCAGAAACTCTGCAAGCCAGAAGGGANTGGCAGGACAT
ATTTAAAGCGATGAAAGGGAAAAACCTACAACCAAGATTACTCTACCCAG
CAAGGATCTCATTCAGATTCGACGGAGAAATTAAAANCTTTACAGACAAG
CAAAAGCTGAGAGAGTTCAGCACCACCAAACCAGCTTTACAACAAATGCT
AAAGGAACTTCTCTAGGCAGGAAACACAAGAGAAGGAAANGACCTACAAT
AACAAACCCAAAACAATTAAGAAAATGGTAATAGAAACATAGATATCGAT
AATTACCTTAAATGTAAATGGAATAAACGCTCCAACCAAAAGACACAGAT
TGGCTGAATGGATACAAAAANAAGACCCGTATATATNCTGTCTACAAGAG
ACCCACTTCAGACCTAGGGACACATACAGACTGAAAGTGAGGGGACGGAA
AAAGATATTCCATGCAAATGGAAACCANAAGAAAGCTGGAGTAGCAATNC
TCATATCAGACAAAGTAGNCTTTAAAATAAAGACTATTANAAGGGACAAA
GAAGGACACTACATAATGATCAAGGGATCAATCCAAGAAGAAGATATAAC
AATTGTAAATATTTATGCACCCAACATAGGAGCACCTCAATACATAAGGC
AAATGCTAACAACCATAAAAGGGGAAATCGACAGTAACACANTCATAGTA
GGGGACTTTAACACCCCACTTTCACCAATGGACAGATCATCCAAAATGAA
AATAAATAAGGAAACACAAGCTTTAAATGATACATTAAACAAGATGGACT
TAATTGATATTTATAGGACATTCCATCCAAAAACAACAGAATACACTTTC
TTCTCGAGTGCNCATGGAACATTCTCCAGGATAGATCACATCTTGGGTCA
CAAATCAAGCCTCGGTAAATTTAANAAAATTGAAATCGTATCAAGTATCT
TTTCTGACCACAACGCTATGAGACTAGANATCAATTACAGGAAAAAATCT
AAAAANCACAAACACGTGGAGGCTAAACAATACGCTACTNAATAACGAAG
AGATCACTGAAGAAATCAAAGAAGAAATCAAAAAATACCTAGAAACAAAT
GACAACGGAAACACAACGACCCAAAACCTATGGATGCAGCAAAAGCAGTT
NTAAGAGGGAAGTTTATAGCAATACAATCCCACCTTAAGAAACAAGAAAC
ATCTCAAATAAACAACCTAACCTTACACCTAAAGCAACTAGAGAAAGAAG
AAAAAAAACCCAAAGTTAGCAGAAGGAAAGAAATCATAAAGATCAGANCA
GAAATAAATGAAAAAGAAATGAAGGAAACAATAGCAAANATCAATAAAAC
TAAAAGCTGGTTCTTTGAGAAGATAAACGAAATTGATAAACCATTAGCAA
GACTCATCAAGAAAAAAANGGAGAAGACTCAAATCAATAGAATTAGAAAT
GAAAAAGGAGAAGTAACAACTGACACTGCAGAAATACAAAAGATCATGAG
AGATTACTACAAGCAACTATACGCCAATAAAATGGAAAACCTGGAAGAAA
CGGACAAATTCTTAGAAANGCACAATNTTCCGAGACCGAACCAGGAAGAA
ATAGAAAATATAAACAGACCAATCACAAGCACTGAAATTGAAACCGTAAT
TAAAAATCTTCCAACAAACAAAAGCCCAGGACCAGATGGCTTCACAGGCG
AATTCTACCAAACATTTAGAGAANAACTAACACCNGTCCTTCTCAAACTC
TTCCAAGAAATTGCAGAGGGAGGAACACTCCCAAACTCATTCTACGAGGC
CACCATCACCCTGATACCAAAACCAGACAAAGATGTCACAAAGAAAGAAA
ACTACAGACCAATATCACTGATGAACATAGATGCAAAAATCCTCAACAAA
ATACTAGCAAACAGAATCCAACAGCACATTAAAAGGATCATACACCATGA
CCAAGTGGGGTTTATCCCAGGAATGCGAGGATTCTTCAATATANGNAAAT
CAATCAATGTGATACACCACATTAACAAATTGAAGGANAAAAACCATATG
ATCATCTCAATAGATGCAGAAAAAGCTTTTGACAAGATTCNACACCCATT
TATGATTGAAAAACTCTCCGGAAAGTAGGCATAGAGAGAACCTACCTCAA
CATAATAAAGGCCATATATGACAAACCCATAGCNAACATCATACTCAGTG
GTGAAAAACTGAAANCATTTCCACTAAGATCAGGAANAAGACAAGGTTGC
CCACTCTCGCCACTNTTATTCAACANAGTTTTGGAAGTCCTAGCCACAGC
AATCAGAGAAGAAAAAGAAATAAAAGGAATNNAAATCGGAAAGAAGAAGT
AAAGCTGTCACTGTTTGCGGATGACATGATACTATACATAGAGAATCCTA
AAGATGCTACCAGAAAACTACTAGAGCTAATCAATGAATTTGGTAAAGTA
GCAGGATACAAAATTAATGCACAGAAATCTCTNGCATTCCTATACACTAA
CGATGAAAAATCTGAAAGAGAAATTAAGGAAACACTCCCGTTTACCATTG
CAACAAAAAGAATAAAATACCTAGGAATAAACCTNCCTAAGGAGACAAAA
GACCTGTATGCAGAAAATTATAAGACACTGATGAAAGAAATTAAAGATGA
TACAAACAGATGGAGAGATATACCATGTTCTTGGATTGGAAGAATCAATA
TTGTGAAAATGACTATACTACCCAAAGCAATCTACAGATTCAATGCAATC
CCTATCAAACTACCAATGGCATTTTTCACAGAACTAGAACAAAAAATTTT
ACAATTCGTATGGAAACACAAAAGACCCCGAATAGCCAAAGCAATCTTGA
GAAAGAAAAACGGAGCTGGAGGAATCAGGCTCCCCGACTTCAGACTATAC
TACAAAGCTACAGTAATCAAGACAGTATGGTACTGGCACAAAAACAGAAA
TATAGATCAATGGAACAGGATAGAAAGCCCAGAGATAAACCCACGCACAT
ATGGTCACCTTATTTTCGATAAAGGAGGCAAGAACATACAATGGAGAAAA
GACAGCCTCTTCAATAAGTGGTGCTGGGAAAACTGGACAGCTACATGTAA
AAGAATGAAATTAGAACACTNCCTAACACCATACACAAAAATAAACTCAA
AATGGATTAAAGACCTAAATGTAAGGCCAGACACTATAAAACTCTTAGAG
GAAAACATAGGCAGAACACTCTATGACATAAATCACAGCAAGATCCTTTT
TTGACCCACCTCCTAGAGAAATGGAAATAAAAACAAAAATAAACAAATGG
GACCTAATGAAACTTAAAAGCTTTTGCACAGCAAAGGAAACCATAAACAA
GACGAAAAGACAACCCTCAGAATGGGAGAAAATATTTGCAAATGAAGCAA
CTGACAAAGGATTAATCTCCAAAATTTACAAGCAGCTCATGCAGCTCAAT
ANCAAGAAAACAAACCAGTCCAAAAATGGGCAGAAGACCTAAATAGACAT
TTCTCCAAAGAAGATATACAGATTGCCAACAAACACATGAAAGGATGCTC
AACATCACTAATCATTAGAGAAATGCAAATCAAAACTACAATGAGGTATC
ACCTCACACCGGTCAGAATGGCCATCATCAAAAAATCTACAAACAATAAA
TGCTGGAGAGGGTGTGGAGAAAGGGAACCCTCCTGCACTGCTGGTGGGAA
TGTAAATTGATGCAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAA
ACTAAAAATAGAACTACCATACGACCCAGCAATCCCACTACTGGGCATAT
ACCCTGAGAAAACCATAATTCAAAAAGAGTCACGTACCACAATGTTCACT
GCAGCNCTATTTACAATAGCCAGGACGTGGAAGCAACCTAAGTGTCCATC
GACAGATGAATGGATAAAGAAGATGTGGCACATATATACAATGGAATATT
ACTCAGCCATAAAAAGAAACGAAATTGAGTTATTTGTAGTGAGGTGGATG
GACCTAGAGTCTGTCATACAGAGTGAAGTAAGTCAGAAAGAAAAACAAAT
ACCGTATGCTAACACATATATATGGAATCTAAAAAAAAAAAATGGTTCTG
AAGAACCTAGGGGCAGGACGGGAATAAAGACGCAGACCTACTAGAGAATG
GACTTGAGGACACGGGGAGGGGGAAGGGTAAGCTGGGACGAAGTGAGAGA
GTGGCATGGACATATATACACTACCAAATGTAAAATAGATAGCTAGTGGG
AAGCAGCCGCATAGCACAGGGAGATCAGCTCGGTGCTTTGTGACCACCTA
GAGGGGTGGGATAGGGAGGGTGGGAGGGAGACGCAAGAGGGAGGAGATAT
GGGGATATATGTATACGTATAGCTGATTCACTTTGTTATACAGCAGAAAC
TAACACACCATTGTAAAGCAATTATACTCCAATAAAGATGTTAAAAAAAA

>rnd-3_family-256#DNA/hAT-Charlie ( Recon Family Size = 42, Final Multiple Alignment Size = 40 )
TCTCAACCCTGGCTGCACATTAGAATCACCTGGGGAGCTTTAAAAAATNC
CGATGCCCGGGCCCCACCCCAGACCAATTAAATCAGANTNTCTGGGGGTG
GGGCCCGGGCATCAGTTTTTTTTAA
>rnd-3_family-158#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
ATTAAAAGANACTAAAGAGACATGACAACCAAATGCAATGCGTGATCCTT
GATTGGATCCTGGATGTGGGGGAAAACGCTAAAGGACATTTTGGGGGGCA
ATTGAGAAAATTGAATGTAAGGTAATATTATATCAATGTTAAATTTCTTG
AGTGTGATGGTACTGTGGTTATGTAAGAGAATGTCCTTGTTCTTAGGAGA
TACACGCTGAAGTATTTAGGGGTGAAGNGTCATGATGTCTGCAACTTACT
CTCAAATGGTTCAGCAAAAATGTGATATATATGTATATATACATATGTAG
ANAGAGAGNAAATGTGGCAAAGAATGTTAACAATTGGTGAATCTAGGTGA
AGGTATATGAGTGTTCATTGTACTGTTCTTTCAACTTTTCTGTAGGTTTG
AAATTTTTCCCGNAGAAAGTTGGGGG
>rnd-3_family-240#LTR/ERVL-MaLR ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
TCCTGGTGTTCACGCCCTTGTATAATTCCCTCCCCTTGAGTGTGGGCTGG
ACCTAGTGACTCGCTTCTAACNAACAGAATATGGCAAAAGTGATGGGATG
TCACTTCCGAGATTAGGTTACAAAAGACTGTGGCTCCCGTCTTGCTGGCA
CTCTCTTTACGCTTGCTCCTGANGAAGNCAGCTGCCATGTTGTGAGCTGC
CTATGGAGAGGCCCACGTGGCGAGGAACTGAGGGCGGCCTCCGGCCGACA
GCCAGCGAGGAACTGAGGCCTCAGTCCAACAGCCGCAAGGAANTGAATCC
TGCCAACAACCACGCGAGGGGCTTGGAAGCGGATT
>rnd-3_family-191#LINE/L1 ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
AAAAATGGCAGAGTAAGGACCTCGGAAAATCCTCTCCCCCANAAAAGCAA
CGANAAAACTGGCAAAANTGTCAAAATCAACCNTTTCAGAACTCTGGAAA
TTAACCAAAGGCTTACAACAATTGAGAAGCGTTTATTCAAGAAAAACNGC
TGAACCTCGGTAAGAACAGCAAGCTTTGTGGCATTTTAACTTGNCCTNTT
CCCACTCCTCCCCCAGCCCTGCGGTAGCTNTGAAAACCAGCAGCCTGGCA
GCCACTGGAGGGGGCAGAACGGNTTGGAGCTCCCTNAAAGCCCCATCCCC
AGAGNACTGTCACTATTCGATGCTTCTCGCGGCTCTCTGGAAGACCCCAT
TCGCAGGGTGTTCTATTTTATCTGACTCGGAGCTCGCTCAGTGNGAAAAG
CCCTATCCCCAGGGCGTTTGTTAAAAACAGTCAGAGAAAATTGTTCGACA
TCACGGCTGCCTGAGGCGGCAAATCAGTTGGGGGCAAACAAGAGGCTGGC
CAAAAAACTTNAAAGGAAAANCTGGGAACGAGATGCCCACAGGGGGCTTT
GAAAAGCTCCGACATATTCCTGGAAATCTAGAAGACCACATGCATCTGTA
GGGCTGTGCACATGCCCAGGAAANCTGAGAAGGCCCTAAGCTCTCANCTC
TGGCTGACTTTGAGACTCTGTGCAAACAGGAAGTGAAGGCTAAGGCAGAG
TTGTAAACTGCCTATGAGTATTGAAGGCGTGCCCCAACACACGCACAGAA
TGCCTCGGCAAAGACTGGGAGAATTNTTGCTTCCAGGCGTTTAAGGAAAT
CTCTGTCCAATCATTAGCTGGCCACTAAGCTAACCGAGTAGANACTTCAG
TGGCCACACACGACGAAGAATACAGACTTTACAGAANTAGTTCAGGAAAG
TCACTAAACAAACAAACAACAAACAACAAAGAGCAACAACAACAAACCCT
GGGAAGGGGAAAGATCTGATTTCCAGAGTTGCCACATTATATTTAAATGT
CCAGTTTTCAACAAAAAATTACGAGACATGCAAAGAAACAGGAAAGTGTG
ACCCATACACAGGAAAAAAAAAGCAANCAATAGAAACTGTCCCTGAGGAG
CCCAGACGTCGGACTTACTAGACAAAGATTNTAAATATGTTCAAAGAACT
AAANGAAACCATGCCTAAAGAACTAAAGGAAGGTNTGAGAATGATGTC
>rnd-3_family-161#LTR/ERVL-MaLR ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
ACTTAAAACTCAGGAAATTTCATATAAAGATCTAGATTTCTAACTTCNNC
TGAAAACNTGGAAGATGGATGTGGTNGATTGATTGCAAAAATGGCCNCAA
TTCTTCGCCCCTCCCTGTNTCCACGCNCTTTGCAATGTGACTTTGCAGCT
CCTCCCATCAAGAGTGGAGTCTATTTCCCCACCCCTTGANTCTGGGCCGG
CCTTGTGACTTGCTTTGACCAATAGAATGTGGCAGAAGTGACGNTGTGCC
AGTTCCGAGCNTAGGCCTCAAGAGGCCTTGCAGCTTCTGCTCTCTCCCTC
TTGGAACCCTGCCATATCCATGTGAACAAGCCCGGTCTAGCCTATGGGAA
AGTGAGAGGTCGCATGGACAGAGACCAGCTGTTCCAGCCGCAGCCCAGGC
ATGTGACAGAGT
>rnd-3_family-223#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
ACCCAGCAGTACGAGGAATCCTCCCCCTCAGGTGTNAACGGAGGCCGAAT
GGGGAACCTGGACTTCTAACCCCGACCCGGCAGTAACGAGGCAGCATCCC
CCCTCATCCGCTGCTCACCCCTGCCGGAGCGGTGTCAGAGGAGCCAGCAA
AACGGAAGGTTTAAATAAGATCCANAGTCTCATAATNTAACANCCCGGAA
TAAACGTTTCAATAAAAAATCGCTCATCATACCAAGAACCAGGAAAATCT
CAANCCGAATGAAAAAGACAATCAATAGATGCCAACGCCAAGATGACANA
GATGTTGGAATTATCTGACAAGGATTTTAAAGCAGCCATCATAAAAATGC
TTCAACGAGCAATCACGAACACNCTTGAAACAAATAAAATAGAAAATCTC
GNTAAAGAAAGCAAAGAAAGAGGGAAAGAANCAAGTGGAAATTTTAGAAC
TGAAAAATACGACAAATAAAATAAACTCAACCGATGGACTCAACAGCAGA
ATGAGGGACAGAGGAAAGAATCGGTGAACCTGAAGATAGANCAATAGAAA
TTACTCAATCTGAACAACAGAGAGAAATAGATTGAAAAAAAAACGAACAG
AGCCTCAGAGACCTGTGGGACTAAAACAAAAGATCTAACATTCGTGTCCT
GGAGAAAGAGGGCTGGGCTGAAAAAGTATTTNAANAAATAATGNCTGAAA
ATTTCNCCAANTTGGCAAAAACATAANCCTACAGATTCAGAAAGCTNAGC
GAACCCCAGGCGGNTAAACCCAAAGAAATTCACACGAGGCACACCGTGGC
AAACTTCTGAAAACTAAAGGCAAAGAAAAAATCTAATAAGAACAACGTCC
CCTTATAGGGGAAAGCAATTGAAAGACCGGATTTCACANAAAAGACATGG
AATCCAAAAGGAAAGTAGGCAACATTTTTCAAGTGCTGAAAGAAAAGACC
TGTCAACCCAGAATTTTATATCCAGTGAAAATATCTTTCGGGAATGAAGG
ANAAATCAAGATGTTCTCAGATGAAGGAAAACTAAGAGAATTCGTCGCCA
GCAGACAACTTNACTAAAANAGTGGCTAAGAGAATTTCTAAACAGNAAGG
AAATGATANNAGAGGAAAACTTGGAATATCAGGAAGGAAGAAAGCAACGN
AAGCAAAAATATGGGTAAATACAATAGGCTTTCCTTCTCCTCTTGAGTTT
TCTAAATTATGTTTGATGATGTTAAAGCAAATATTATAACACTGTCCGAT
GTGGTTCTCAGTGTAGAGGACATATTAAGACAATTATATTATAGGTGGGG
AGGGTAAAGGAANTTAAGTTTCTACACTTCANTCGAANTGGTAAAATGTT
GACACCAGTAGANTGTGATAAGTTACGTATATATAATGTAATACCTAGAG
CAACCACTAAAAAAGCTATACAAAGAGATACANTAAAAACACTATAGANA
AAAGNTTTCTAAAANAAAAGTTCAAGNAACCCAAANGAAAGCGGAAAAAA
GAAAACAAAGAAATGAGTAAACACAGAAAACAAATATAGAGAGAACNAAA
GATAAGACANNGCTGAAGCCCTAACATANCAACAGTTNCACATAAATGCA
AATGATNTAGATATACCACTAAAANACAGGAGATNGACAGAGCGGATTTA
GAAACGTTATNACCGAACTATATGCTTAACACAACTATGTGAAA
>rnd-3_family-302#SINE/MIR ( Recon Family Size = 23, Final Multiple Alignment Size = 20 )
AATGGTTAAGAGCACGGGCTCTGGAGCCAGACTGCCTGGGTTCGAATCCC
AGCTCTGCCNCTTGCCAGCTGTGNGACCTTGGGCAAGTCGCTTAACCTCT
CTGNGCCTCAGTTTCCTCGTCTGTAAAATGGGGATNATAACAGTACCTAC
CTCACAGGGTTGTTGCGAGGATGAAATGAGTCAATATNTGTAAAGCGCTT
AGAACA
>rnd-3_family-166#DNA/TcMar-Tigger ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
ATATGGAGGAACCACGGATACGGAGGGCCGACTATAAGTTATACGCGGAT
TTTCGACTGCGCGGAGGGTCGGCGCCCCTAACCCCCGCGTTGTTCAAGGG
TCAACT
>rnd-3_family-62#LINE/L2 ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
TTTTGGGTATCTCACCCAGTCCCGTGGCTTTAAATACCATCTATACTGAT
GACTCCCAAATCTATATCTCCAGCCCAGACCTCTCCCCCGAACTCCAGAC
TCATATATCCAACTGCCTACTGGACATCTCCACTTGGATGTCTNACAGGC
ATCTCAAACTTAACATGTCCAAAACCGAACTNCTGTTCTTNCCCCCAAAC
GGCTCCTCCTGCAGTCTTCCCCATCTCAGTNAATGNCAACNCCATCTTTC
CAGTTGCTCAGGCCAAAAACCTNAGAGTCATCCTGGACCCTTCTTTCATA

>rnd-3_family-36#Simple_repeat ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
TATNTATACATATATATATACGTATGTGTGTATATGTATATATATATATA
TACACACACATATATACATATTGTATACACATACATATGTATAAAATATA
CGTGTATGTATATACATATATAATATATGTATGTATATATACATATACGT
ATATACGTGTGTATATGTATATATATTCGTGTGCACTGCACACACCATCT
C
>rnd-3_family-196#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
GCAGATGCAAGGNGAANTGATNAGTTAGAAGAGACTTTAAAAGACATATC
AACCAANTGNAATGTGCGGCTTGTTTGGATCCTGATTCAAACAAACAGAA
CTTAAAACATTTNTGAGACAACTGGAAATTTGAATATTTGATGATGTTAA
GGAATTATTAATATTTTTAGGTGTGATAATGGTGTTGTTATGTTTAAAGA
GGTCCTTATCTTTTAGAAATACGTACTGAAATATTTACGGATGAAATGAT
GTGTTGTCTGGGATTTGCTTCAAAATAATATGGGAGGGGGGGAGTNGATG
GAGTAGAGATGAAACAAGATTGGCCGATAATTGTTGAAGCTGGGTGATGG
GTACGTAGGGGTTCATTATACTATTCTACTTTCGTATGCGTTTGAANTTT
TCCATAATAAAAAGGTTTTTTTT
>rnd-3_family-129#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
TGAATAGAAATACATAATTGAATAAATAAATAAATGGGGGAGAAGGGACA
GCTCTTCCTTACAGTAGAATNCCAATTAATAAATGTAGAAGGAATGANGG
AANTAGAAAATCACCATTTGGCAAACACCACAGTAATAATTGTTNCAGGC
AAGAATCATCGATGGATGCTAAAACTAGTGGGTGAAANTTTGATGAGAAA
TAGGATATTTACATAGTCTCAAAGTATCTCCCCACGANATACTTATTAAT
TACAAAGGGAAAATAGTAACTTTACAGTGGAGAAACATGGCAGACAACAC
CTCAACCAGGTGATCAATGGTCAACATCACCGGTAATAAGACTATGGACA
TCATATCATGTACCCCCTGATANGACGTACCGAGAAGGGCACATCACTTC
TGTGATATTACCAAAAATGTATAATGCTTA
>rnd-3_family-162#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
ACTTCCGCTTCCGGCCANGACGGAGTAATAGGGACCGGACTTGCCCTCCC
ACCTGAAACAACTAAAAAACTGGACAAAATATATGAAACAATTGTTTTCA
AGACATTGGACAACAGGTAGCANAGGACNGTGANCCCTGAGAGAAGGGAA
ATAAACGAGGTGAGCCCTACGACTGCCCCAGCTTACTGCCTNGAGAGAGT
TTCCAGACCGCGGCGCAGGGAAGGGGAACCCAAGCGGAGCNCGGCGGNCT
CNCTGAGTTGAGGAGACAGACGAGAGTCCAGGGAGGCCAAGGCAGCTAGA
GTTCGCGGGGCAGAGTACCAGAGAGGAGGGAGCTGCACAGAGAGAGAGAA
GACAGAGAGAGAGAGACAGAGAGGANCTCCACAAATCTTCAGAGTCCCCT
AGAGTATGGCAGGAAACTAATCAACAGCANATGAAGAATCACCTGGGAGG
AAATGGGAGCGATGAAGANCGTAGAAAGCAGTTCCTGTTGCCTCCAGCCA
NAGTGGAAAGACCTCGTAATTCACAGGGCATTGGGTAGAGTACTCAAAAG
GATATTGCCTCTGTAATGGAAACTAAATTAGTCCTAGANTAAACGCTGCT
CTTGATCTGCATAACAAAGCTTAAAAGAANGCCGAAAGGATNAAACCGTT
TTTAAGTAACTTAACTGCGTCCCAGAACAAAGTTCAAGAATATTTATAGG
AATACAAAAANATCCAGCACCCAACAAGGTAAAATTAACAATGTCTGGCA
TCCAATCAAAAATTACCANGCATGAAAAGAAGCGGGAAAACNCAACCCAT
NATAAGTTCAATCGAACTGACACAGAGTTNGAATTAGCAAAAGGNACATG
AAACCGTTATTACTATATTNCGTACGTTCAGAATGTTACGTAGAAANNTG
GGAGGCATACAAAGAAGACAGNAAAATGTAACTCNTAATGAGATAGTAAA
ACNACAAAACTTGAGATAGAACATTCACTGGATGTGATTA
>rnd-3_family-367#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
TCCAGATCCACTCTCCACCCTTCTCTGTGCCTCCGGAGGCTGACCNCTAT
GGACTGCATCAACCGGGCTCCCTTGCCCTCTGGCTTCCGTTGGGTTCGGC
CAATGGGAGGCNTTGGCAGGAGACCGGAGGGCGGAAGGAGTGAGGTGCGG
GGTATTTATTCCCCTGGCTCCCTCCCGNCTGGCCGTGGGCTGGCGATGGC
TGTGCTCTNCTACCTAAGGCCAGATCTCTGTCGGGTGGCCTCTCAACAGC
TCTCTCATGTTTCCGTAACCGCTTCCTCCCCTGCTCCTTCAGGTCTAGGG
TGGTAACGGNCCCGCTGTTAGTCCCCGGGTACTTCACCATCCCTTGTGGT
TTCTCTTANCCCTGCCCACACCTTTGTAAATAGTCTCTTCATTAAACTCC
CCCCAATNTTCCCACCTGAATGGGCCCTGTTTCCTGCCAGGACCCGACTG
A
>rnd-3_family-33#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
ATTTCTGCACGCCCCTCCCCGCGGCTCCCACTGGTTTCGCTCCCAACAGC
CAGCACCCGTGTCTCTTTGTTGGAGGNNTGCCCTCGGGCTGCTGGAGCNC
NCTTTGCCTGCTANCAAGGAAGGCCGGAAGTGCCTGGGAGTTTACATCCC
CCGCCCGGGGCGGCCCTTAACCAGTGACTGCCCGGCGCNGGAGTGGAAAA
GCTANCTCCGCTGCCTCGGNCAACCAGGGGGACCAGGCCTGGAACTCCCC
TCTGCAGAGCCGGTTGCCCGCAGAGTACGCTNAGCACATTACTGGCTTCC
TTCCCTTCCCTGTCTTACTTCCCCACCCCCTTACCAGTGTTTCCTGGGAC
ACTTCCTANAAATCACTTGCACTTGAATCCTCGTCTCAGGGTCTGCTTCT
GGGGGAACCCAACCTAAGACA
>rnd-3_family-186#LTR/ERVL ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
ACCTCTTTGGATTTTGGAATCAGCATAGTCCTCACTTGGGTATANTACTC
TGGCCCCTTTATCGGGTGACCNAAGGCTGCTAGTTTCGAATGGAGCCCGG
AACAAGAAAACGGTCTGCAACAGNTCTAGACTGCGACGCAANNTGTCCTG
CCACTTGGGCCATATGATCCAGCAGATTCAACGGTACTGGTGTCGATGGC
AGANAGTGACGCAGTTTGAGTTCTTTGGCAAANCTCATACGGAATCAGAG
TATAAACCTAGGACGGAGTAAGGCCATGCCATCCTCTGCGGANAACTACT
ATCNTTTTGAAAAGCAGCTTTTGGCATCTACTGGNCCTTAGTAGACAGAA
TGCCTGACNATGGGAGCCATAAGCGANCATGCGNCTCAAANTGTCCATCG
NGAACTGGGTGTTATCTGATCCACCGAACCATAAAGTTGGGTGTGCACAG
CAGCATTCCGTCANAAGATAGAAGTTNTATATACGATATNAGNCCTGGAA
GGCCCTGAAGCACAGAAANTTGCNTGAAGAGGTGGCTCAGACTCCCGCGG
TCCCTGCTCCTATTGTACTGCCTTCTCCTTCCCAACCCGTANNTATGGCC
TCGTGGGGAGTTCCCTGCCATCACTTGACGGAGAAAGAGNACACTTGGNC
CTGGTTTAAGCGATTCCGCACAGTATTCNGGCGCCACGCAGAGGTGGACA
GCTGCAGCATTTTACGCCCCTCTCTNAGAGATCCCTGAAGGACAGTGGTG
AAGAGAAATCCTCCCAGNGAGCAGAATTTTGGGCGGTGCGTCTGGTTNTT
CACTTCGCCTGGAAGGAGAAATAGCCGGTTGTATNNTTAACGCTGATCAT
GGACGGTGGCGAAAGAGTTGGCCGGTTGGTCAGGGACNTGGAAGGAACGC
GACTGGAAAATTGGTGACAAGGAGGTCTNGGGGAGAGACATGTGGATGGA
CCTCTCTGGATGGACGGAAAACGTGNAGATATTTGTGTCCCACGTNAATG
ACCACCAGAGAGCATCCCAGCAGAGGAGGCTTTCAANAATCGGGTGGATA
CGATGACCTATCCCGTGGATGTCAGTCAATCTCTTTCCCAGCCACTTTTG
TCATCGCCCAATGGGCTCAGCGACATGGACTTCCNTTCACCAGGGTTGAC
NTNGCTNGNGCCANTACTAAGTGCCCAATCTGCCAGAGCAGATTACACTN
AGTCCTTGACATANCATCATTCNCCGGGGGACTAGCCAGCACTNTGTGGA
TTTTATCACTTCCGCCCGGAAGGGGCAGCGATTTGTCCTTAATGGAGTAG
ACACTTATTCTAGATACGNATTTGCCTTCCCTGNCTNCTATGCCTCTGCC
AGNANNACTATCTGTGGACTTACNGAATGCTTTATCCACCANTATGACAT
TCTACACAACATTGCTTCTGNNCAAGGNACTCACGTTATAGAGAAAGAAG
TGNAGCAATGGACACATGCACATGAGATTTACCGGTGTCTNACCATGTNC
CCCGTTATNCNGAAGCAGCCGGTCTGANAGAATTAGTGGAATGGCTTTTT
AAAGACACAGTGACAGTGCCAGCGATGTGACAGCACCTTGCAGGGCCAGG
GCAAGGTTCTCCAGAAGACTGTATATGCTCTGAATCAGTGTCCANCATAT
GGTNCTGTTTCTNCCATAGCCAGGACTCACAGGCCTAGGAACCAAGGAGT
GAAATGGAAGTGGCACCGCTCACTATTACCTCCAGTGACCCACTNGCAAA
ATTTCTGCTTCCCGTCCCCACGACCTTATGCTCCGCTGGTCTGGAGGTCT
TNGTNCCCGCGGGAGGAATGNTTCCACCAGNGGACACAACANCGATTCCA
CTAAATTGNAAGNTAAGATTGCCACTTGGCCNCTTTGGGCTCCTCGTGCC
TCTGAATCAACAGACAAAGAAGGGAGCTACTATGCTGGCCGGGGTGATTG
ATCCTGACTGCCAAGGGGAAATTGGACTGCTATTACACAACGGAGGTAAG
A
>rnd-3_family-51#LTR/ERVL-MaLR ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
GTGACTCTGGAAGACAGATAGTTGCCCATCCAATATCCATCCCCTCTTCT
CCCTTAGTANTAGAACTCTTNTTGCTGGGCACATGGCCGCTGGAAAAAGA
CTACATTTCCCAGCCTCCCTGCAGNTAGGTACGGCCACGTAACTAAGTTC
TGGCCAATGAGATGTAAGTAGAAATACTATACGAGACTCGGGAANTCTCC
TTTAAGGGGAGGGNTTGCCCTTCTTCTTCCTTCCCTCCTGCCTGGAACAC
GGACGTGATGGCTGGAGCTCCGGCAGCCATCTTGGACCATGAGGTACTGA
GATGAAGGCCACGCGCTGAGGATGGCGGAGCANAAAGNTAAGAGCCTGGG
TCCCTGGTGACNCTGTGGAGCCGCCGTACCAGCCCTGGACTACCTGCCTC
TGGACTTCCTTTCGTGAGAGAGAAATAAACTTCTATCTTATTTAAGTCAC
TGTTATTTGTTTCTGTTTTATGCAGCTGAACCTAA
>rnd-3_family-147#LTR/ERVL-MaLR ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TCTCCCNTCTCAGGGCNTGGGGTTTGNGTGGGGCAGCCGCCCACNCCCTT
GGCTCTAGGGGCNGGCACGCNNCCCGGGCCTGNCCCNCTAACNGAAGNCA
ACTCACTAGCCNCACAGTGACTTATCCACAGNGCCATGGATGGTTCAGGG
NTGGGCAGTGAGACGNAACCGCGAGACTTTTGCTGGAACTACTGGGGAAG
CGGCTCTCTTCCTGCTGGGNTTCTAAANCGGTAGGACGTAAGCCNGGAGC
TGCCTANAGCTNTTCTGCAAGCCTGCCTGAGGACGAAGCCAACAGAGAGG
GCAGAGCCGAGAGACGGGAGAGAGAGACATGAGTCCTGATGACGTCATTC
GAGCCCCTGGATCCAGCCGTACCTGAAGCAGCCACCTCTGGACTTTTTAG
TTACATGAGCCAATAAATTCCCTTTTGCTTAAGCTAGTTTGAGTTGGGTT
TCTGTTACTTGCAACCAAAGGAATCCTAATCGA
>rnd-4_family-92#LINE/L1 ( Recon Family Size = 159, Final Multiple Alignment Size = 129 )
CAAACATTTAGACTCAGCCATAAAAAGAAACGAAATTGAGNTATTTGTAG
TGAGGTGGATGGACCTANAGTCTGTCATACAGAGTGAAGTAAGTCAGAAA
GAGAAAGACAAATACCGTATACTAACACATATATATGGAATCTAAGAAAA
AAAANNTCATGAAGAACCTAGGNGTAAGGCAGGAATAAAGACGCAGACCT
NCTAGAGAACGGACTTGAGGNTATGGGGAGGGGNAAGGGTGAGCTGNGAC
AGGGCGGGAGAGAGNCATGGACATATACACACTANCAAACGTAGTAAGGT
AGATAGCTAGTGGGAAGNAGCCGCATGGCACAGGGANGTCGGCTCGNTGC
TTTGTGCNCAGCCTGGAGGGGTGGGATNGGGAGGGTGGGAGGGAGGGAGA
CGCAAGAGGGAGGGGATATGGGGACATATGTATACGTATGACTGATTCAC
TTTGTTATAAAGCAGAAACTAACACANCATTGTAAAGCAATTATACTCCA
ATAAAGATGTTAAAAAAAAAAAAAAAAACATTTAGAGAAGAGCTAACACC
TATCCTTCTCAAACTCTTCCAAAATATAGCAGAGGGAGGAACACTCCCAA
ACTCATTCTACGAGGCCACCATCACCCTGATACCAAAACCAGACAAAGAT
GNCACAAAGAAAGAAAACTACAGGCCAATATCACTNATGAACATAGATGC
AAAANTCCTCAACAAAATACTAGNAAACAGAATCCAACAGCACATTAAAA
GGATTATACACCATGATCAAGTGGGGTTTATCCCNGGGATGCAAGGATTC
TTCAATATACGCAAATCAATCAATGTGATACACCATATTAACAAATTGAA
GGANAAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCTTTCGACA
AAATTCAACACCCATTTATGATAAAAACTCTCCAGAAAGTAGGCATAGAG
GGAACTTACCTCAACGTAATAAAGGCCATATATGACAAACCCACAGCNAA
CATCGTTCTCAATGGTGAAAAACTGAAACCATTTCCTCTAAGATCAGGAA
NAAGACAAGGACGTCCACTCTCACCACTATTATTCAACATAGTTTTGGAA
GTCCTAGCCACNGCAATCAGAGAAGAAAAAGAAATAAAAGGAATACAAAT
CGGAAGAGAAGAAGTAAAACTGTCACTGTTTGCAGACGACATGANACTAT
ACATAGAGTATCCTAAAGATGCCACCAGAAAACTACTAGAGCTAATCAAT
GAATTTGGTAAAGTTGCAGGNTACAAAATTAATGCACAGAAATCTCTTGC
ATTCCTATACACTAACGACGAAAATCTGAAAGTGAAATTAAGGAAACACT
CCCATTTACCACTGCAACAAAAAGAATAAAATACCTAGGAATAAACCTAC
CTAAGGAGACAAAAGACCTGTCTGCAGAAAACTATAAGACACTGATGAAA
GAAATTAAAGATGATACAAACAGATGGAGAGATATACCATGTTCTTGGAT
TGGAAGAATCAATATTGTGAAAATGACTATACTACCCAAAGCAATCTACA
GATTCAATGCAATCCCTATCAAATTACCAATGGCATTTTTCACAGAACTA
GAACAAAAAATCTTAAAATTTGTATGGAGACACAAAAGACCCTGAATAGC
CAAAGCANTCTTGAGGGAAAAAAACGGAGCTGGAGGAATCAGNCTCCCTG
ACTTCAGACNATACTACAAAGCTACAGTAATCAAGACAGTATGGTACTGG
CACAAAAACAGAAATATAGATCAATGGAACAGGATAGAAAGCCCAGAGAT
AAACCCACGCATNTATGGTCANCTNATCTATGATAAAGGAGGCAAGGNTA
TACAATGGGGAAAAGACAGTCTCTTCAATAAGTGGTGCTGGGAAAACTGG
ACAGCCACATGTAAAAGAATGAAATTAGAACNCTCCCTAACACCGTACAC
AAAAATAAACTCNAAATGGATTAAAGACCTAAATGTAAGACCGGACACTA
TAAAACTCTTAGAGGAAAACATAGGNAGAANACTCTNTGACATAAATCAC
AGCAAGATCTTTTTTGATCCACCTCCTAGAGNAATGGAAATAAAAGCAAA
AATAAACAAATGGGACCTAATGAAACTTAAAAGCTTTTGCACGGCAAAGG
AAACCATAAACAAGACGAAAAGACAACCCTCAGAATGGGAGAAAATATTT
GCAAATGAAGCAACTGACAAAGGATTAATCTCCAAAATATATAAACAACT
CATGCAGCTCAATATCAAAAAAACAAACAACCCAATCCAAAAATGGGCAG
AGGACCTAAATAGACATTTCNCCGAAGAAGANATACAAATGGCCAACAAG
CACATGAAAAGATGCTCAACGTCATTAATNATCAGAGAAATGCAAATCAA
AACCACAATGAGATATCACCTCACACCNGTCAGAATGGCCATCATCAAAA
AGNCTACAAACAACAAGTGTTGGAGAGGGTGTGGAGAAACGGGAACNCTC
ATACACTGCTGGTGGGAGTGTAAATTGGTACAGCCTCTNTGGAGGGCAAT
TTGGCAGTTCCTCAAAATATTAAAAATAGAACTACCCTTTGACCCAGCAA
TTCCACTTCTAGGAATTTATCCTAAGAAAACCATAATTCAAAAAGAGATA
TGTACCGCAGCATTGTTTGTAATAGCAAAAAACTGGAAACAACCTAAATG
TCCATCAATAGGGGANTGGTTAAATATATGGTACATCCATACAATGGAAT
ACTATGCAGCCATAAAAAGGAACGAAATCGNGCCATNTGTANCGACGTGG
AAAGACCTAGAGNCTGTCATACAGAGTGAAGTAAGTCAGAAAGAGAAAAA
CAAATACTGTATACTACGCATATATGTGGAATCTAAAAAAAAAAAATGGT
CATGAAGAACTAGGCAAGGCGGGAATAGAGACACAGATACTAGAGAACGG
ACTTGAGGATATGGGGAGGCGGAAGGGTAAGGTGTGACGAAGTGGGAGAT
TGGGATTGACGTATATNCGCTAATATGTATAAAATAGATAACTAATAGGA
ACCTGCTATATAGCACAGGTAGATCAGCTCGGTGCTTTGTGACCACCTAG
AGGGGTGGGATAGGGAGGGTGGGAGGGAGACACAAGACGGAGGGGATATC
GGGACAATGTATACAAGTATCGAATCATTACGTTGTACACCTGAAACTAA
TACATTATACGNCAATTATACCTCAATAAAGAT
>rnd-4_family-12#LINE/L1 ( Recon Family Size = 98, Final Multiple Alignment Size = 86 )
CCAGAGNCCCCGAATCAGCGGCTCCTTTAACCCCGTNCTGTCTGAGCGAA
GAANAGACGCCCTCNGGCGACCTACACGCAGGGGCGGGGCCAAATCCAAA
GCTGAGCCCCNGGAGCTGTGNGAACAAAGAAGAGAAAGGGAAATCTCTCC
CAGCAGCCTCAGGAGCAGCGGATTAAATCTCCACAATCAACTTGATGTAC
CCTGCATCTGTGGAATACCTGAATAGACAACGAATCATCCCAAATTGAGG
AGGTGGACTTTGGGAGCAAGGATTTATGACTTTTTTCCCTTTTCCTCTTT
TTGTGAGTGTGTATGTGTATGTTTCTGGTGTGTGATTTTTGTCTGTATAG
CTTTGCTTTTCACCATTTGTCCTAGGGTTCTGTCCATCCGTTTGTTTGGT
TGCTCNCTTCTTTTTTTTTAAAACTTTAAAAAATTTTTTTAATAATTATT
TTTTATTTTAATAACTTTATTTTATTTATTTTCTTTCTTTTCTTTCTTTC
TTTTTTTTCTCCCTTTTATTCTGAGCCGTGTGGATGACAGGCTCTTGGTG
CTCCAGCCAGGCGTCAGGGCTGTGCCTCTGAGGTGGGAGAGCCAAGTTCA
GGACACTGGTCCACAAGAGACCTCCCAGCTCCACGTAATATCAAACGGCG
AAAATCTCCCAGAGATCTCCATCTCAACGCNAAGACCCAGCTCCACTCAA
CGACCAGCAAGCTACAGTGCTGGACACCCTATGCCAAACAACTAGCAAGA
CAGGAACACAACCCCACCCATTAGCAGAGAGGCTGCCNAAAATCATAATA
AGNCCACAGACACCCCAAAACACACCACCAGACGTGGACCTGCCCACCAG
AAAGACAAGATCCAGCCTCATCCACCAGAACACAGGCACTAGTCCCCTCC
GCCAGGAAGCCTACACAACCCACTGAACCAACCTTAGCCACTGGGGACAG
ACACCGAAAACAACGGGAACTACGAACCTGCAGCCTGCGAAAAGGAGACC
CCAAACACAGTAAGNTAAGCAAAATGAGAAGACAGAGAAACACACAGCAG
ATGAAGGAGCAAGGTAAAAACCCACCAGACCTAACAAATGAAGAGGAAAT
AGGCAGTCTACCTGAAAAAGAATTCAGAATAATGATAGTAAAGATGATCC
AAAATCTTGGAAATAGAATGGAGAAAATGCAAGAAACGTTTAACAAGGAC
CTAGAAGAACTAAAGAGCAAACAAACAGTGATGAACAACACAATAAATGA
AATTAAAAATTCTCTAGAAGGGATCAATAGCAGAATAACTGAGGCAGAAG
AACGGATAAGTGACCTGGAAGATAAAATAGTGGAAATAACTACTGCAGAG
CAGAATAAANAAAAAAGAATGAAAAGAACTGAGGACAGNCTCAGAGACCT
CTGGGACAACATTAAACGCACCAACATTCGAATTATAGGGGTCCCAGAAG
AAGAAGAGAAAGAAAGGGACTGAGAAAATATTTGAAGAGATTATAGTTGA
AAACTTCCCTAATATGGGAAAGGAAATAGTTAATCAAGTCCAGGAAGCAC
AGAGAGTCCCATACAGGATAAATCCAAGGAGAAACACGCCAAGACACATA
TTAATCAAACTATCAAAAATTAAATACAAAGAAAAATATTAAAAGCAGCA
AGGGAAAAACAACAAATAACACACAAGGGAATCCCCATAAGGTTAACAGC
TGATCTTTCAGCAGAAACTCTGCAAGCCAGAAGGGAGTGGCAGGACATAT
TTAAAGTGATGAAGGGGAAAAACCTACAACCAAGATTACTCTACCCAGCA
AGGATCTCATTCAGATTTGATGGAGAAATTAAAACCTTTACAGACAAGCA
AAAGCTAAGAGAATTCAGCACCACCAAACCAGCTTTACAACAAATGCTAA
AGGAACTTCTCTAGGCAGGAAACACAAGAGAAGGAAAAGACCTACAATAA
CAAACCCAAAACAATTAAGAAAATGGTAATAGGAACGTACATATCGATAA
TTACCTTAAATGTAAATGGATTAAATGCTCCAACCAAAAGACACAGACTG
GCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGAGAC
CCACTTCAGACCTAGGGACACATACAGACTGAAAGTGAGGGGATGGAAAA
AGATATTCCATGCAAATGGAAATCAAAAGAAAGCTGGAGTAGCAATTCTC
ATATCAGACAAAATAGACTNTAAAATAAAGACTATTANAAGAGACAAAGA
AGGACACTACATAATGATCAAGGGATCAATCCAAGAAGAAGATATAACAA
TCGTAAATATTTATGCACCCAACATAGGAGCACCTCAATACATAAGGCAA
ATACTAACAGCCATAAAAGGGGAAATCGACAGTAACACAATCATAGTAGG
GGACTTTAACACCCCACTTTCACCAATGGACAGATCATCCAAAATGGAAA
TAAATAAGGAAACACAAGCTTTAAATGACACATTAAACAAGNTGGACTTA
ATTGACATTTATAGGACATTCCATCCAANAACAACAGAATACACGTTCTT
CTCAAGTGCNCATGGAACATTCTCCAGGATAGATCATATCTTGGGTCACA
AATCAAGCCTCGGTAAATTTAAGAAAATTGAAATCGTATCAAGTATCTTT
TCTGACCACAACGCNATNAGACTAGANATCAATNACAGGAAGANATCTGT
AAAAAATACAAACACATGGAGGCTAAACAATACACTNCTTAATAACCAAN
NGATCACNGAAGAAATCAAAGAGGAAATCAAAAAATACCTAGAAACGAAT
GACAATGAAAACACAACGNCCCAAAACCTATGGGATGCAGCAAAAGCAGT
TCTAAGAGGGAAGTTTATAGCAATACAATCCTACCTTAAGAAACGAGAAA
NATCTCAAATNAACGACCTAAGCTTCCACCTNAAGAAATTAGAGAAAGAA
GAGCAAAATAAACCCAAAGTNAGCAGAAGGAAAGAAATATAAAGATCAGA
GCAGAAATNAATGAAAAAGAAATGAAGGAAACAATAGCAAAGATCAATAA
AACCAAAAGCTGGTTCTTTGAGAAGATAAACAAAATTGATAAACCATTAG
CCAGACTCATCAAGAAAAAAAGGGAGAAGACTCAAATCAATAGAATTAGA
AATGAAAAAGGAGAAGTAACAACTGACACTGCAGAAATACAAAGGATCAT
GAGAGATTACTACAAGCAACTCTATGCCAATAAAATGGACAACCTGGAAG
AAATGGACAAATTCTTAGAAATGCACAACCTTCCGAGACTGAACCAGGAA
GAAATAGAAAATATGAACAGACCAATCACAAGCACTGAAATTGAAACTGT
GATTAAAAATCTTCCAACAAACAAAAGCCCAGGACCAGATGGCTTCACAG
GCGAATTCTATCAAACATTTAGAGAAGAGCTAACACCTATCCTTCTCAAA
CTCTTCCAAAATATAGCAGAGGGAGGAACACTCCCAAACTCATTCTACAA
GGCCACCATCACCCTGATACCAAAACCAGACAAAGATGTCACAAAGAAAG
AAAACTACAGGCCAATNTCACTGATGAACATAGATGCAAAAATCCTCAAC
AAAATACTAGCAAACNGAATCCAGCAGCACATTAAAAGGATAATACACCA
TGATCAAGTGGGGTTTATCCCAGGAATGCAAGGATTCTTCAATATACGGA
AATCAATCAACGTGATACACCATATTAACAGATTGAAGGAGAAAAACCAT
ATGATCATCTCGATAGATGCAGAGAAAAGCNTTTGACAANATTCAACGCC
CATTTATGATAAAAACCCTCCAGAAAGTAGGCATAGAGGGAACTTTCCTC
AACATAATAAAGGCCATATATGACAAACCCACAGCCAACATCATCCTCAA
TGGTGAAAAACTGAAACCATTTCCNCTAAGATCAGGAACAAGACAAGGTT
GCCCACTCTCACCACTATTATTCAACATNGTTTTGGAAGTCTTAGCCACA
GCAATCAGAGAAGAAAAAGAAATAAAAGGAATCCAAATTGGAAAAGAAGA
AGTAAAGCTGTCACTGTTTGCAGATGACATGATACTATACATAGAGAATC
CTAAAGATGCTACCAGAAAACTACTAGAGCTAATCAATGAATCTGGTAAA
GCAGCAGGATACAAAATTAATGCACAGAAATCTCTTGCATTCCTATACAC
TAATGACGAAAAATCTGAAAGTGAAATTAAGGAAACACTCCCATTTACCA
TTGCAACAAAAAGAATAAAATACCTAGGAATAAACCTACCTAAGGAGACA
AAAGACCTGTATGCAGAAAACTATAAGACACTGATGAAAGAAATTAAAGA
TGATACAAACAGATGGAGAGATATACCATGTTCTTGGATTGGAAGAATCA
ACATTGTGAAAATGACTGTACTACCCAAAGCAATCTACAGATTCAATGCA
ATCCCTATCAAACTACCANTGGCATTTTTCACAGAACTAGAACAAAAAAT
TTCACAATTTGTATGGAAACACAAAAGACCCCGAATAGCCAAAGCAATCT
TGAGAAAGAAAAACGGAGCTGGAGGAATCGGGCTCCCTGACTTCAGACTA
TACTACAAAGCTACAGTAATCAAGACAGTATGGTACTGGCACAAAAACAG
AAATATAGATCAATGGAACAGGATAGAAAGCCCAGAGATAAACCCATGCA
CATATGGTCACCTTATCTTTGACAAAGGAGGCAAGAATATACAATGGAGA
AAAGACAGCCTCTTCAATAAGTGGTGCTGGGAAAACTGGACAGCTACGTG
TAAAAGAATGAAATTAGAACACTCCCTAACACCATACACAAAAATAAACT
CAAAATGGATTAAAGACCTAAATGTAAGGCCAGACACTATCAAACTCTTA
GAGGAAAACATAGGCAGAACACTCTATGACATAAATCACAGCAAGATCCT
TTTTGACCCACCTCCTAGAGAAATGGAAATAAAAACAAAAATAAACAAAT
GGGACCTAATGAAACTTAAAAGCTTTTGCACAGCAAAGGAAACCATAAAC
AAGACGAAAAGACAACCCTCAGAATGGGAGAAAATATTTGCAAATGAAGC
AACTGACAAAGGATTAATCTCCAAAATTTACAAGCAGCTCATGCAGCTCA
ATANCAAAAAAACAAACAACCCAATCCAAAAATGGGCAGAAGACCTAAAT
AGACATTTCTCCAAAGAAGATATACAGATTGCCAACAAACACATGAAAGA
ATGCTCAACATCACTAATCATTAGAGAAATGCAAATCAAAACTACAATGA
GGTATCATCTCACACCGGTCAGAATGGCCATCATCAAAAAATCTACAAAC
AATAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACCCTCNTGCACTGTTG
GTGGGAATGTAAATTGATACAGCCACTATGGAGAACAGTATGGAGGTTCC
TTAAAAAACTAAAAATAGAACTACCATATGACCCAGCAATCCCACTACTG
GGCATATACCCTGAGAAAACCATAATTCAAAAAGAGTCATGTACCAAAAT
GTTCATTGCAGCTCTATTTACAATAGCCAGGACATGGAAGCAACCTAAGT
GTCCATCGACAGATGAATGGATAAAGAAGATGTGGCACATATATACAATG
GAATATTACTCAGCCATAAAAAGAAACGAAATTGAGCTATTTGTAGTGAG
GTGGATGGACCTAGAGTCTGTCATACAGAGTGAAGTAAGTCAGAAAGAGA
AAGACAAATACCGTATGCTAACACATATATGTGGAATCTAAAAAAAAGAA
AAAAATGTCATGAAGAACCTAGGGGCAAGACAGGAATAAAGACGCAGACG
TAGAGAACGGACTTGAGGATACGGGGAGGGGGAAGGGTAAGCTGGGACGA
AGTGAGAGAGTGGCATGGACATATACACACTACCAAACGTAAAATAGATA
GCTAGTGGGAAGCAGCCGCATAGCACAGGGAGATCNGCTCGGTGCTTTGT
GACNACCTAGAGGGGTGGGATAGGGAGGGTGGGAGGGAGACGCAAGAGGG
AGGAGATATGGGGATATATGTATATGTATAACTGATTCACTTTGCTGTAC
AGCAGAAACTAACACAACATTGTAAAGCAACTATACTCCAATAAAGATGT
TAAAAA
>rnd-4_family-747#DNA/hAT-Charlie ( Recon Family Size = 50, Final Multiple Alignment Size = 50 )
AGCAGCGGTTCTCAAAGTGTGGTCCGCGGACCCCTGGGGGTCCCCGAGAC
CCTTTCAGGGGNTCCGCAGGTCAAACTATTTTCATAATAACACTAAGACG
TTATTTGCCTTTTTCACTGTGTTGACATTTGCACTGATGGTGCAAAACCG
CTGGTGCCTTAGCATGAATCAAGGCAGTGGCACCAAACTTCTAGTAGTCA
TTGTATTCTTCACCGCCACGCACTCGCAGNATGNAAAAAAAGCCAGTTTC
ACTTAAGAATGTCCTTGATGAAGCAGTAAAAATTAATTAATTTTATTAAA
TCTCGACCCTTGAGTACACGTCTTTTTAATATTCTGTGTGACGAAATGGG
AAGTACACATAAAGCACTTCTGCTGCATACCGAAGTATGATGGTTGTCTC
AAGGAAAAGCACTTGTGTATTGAGTTGTGAGCTGAACTAGCCGCTTTTTT
ACGGAACACCATTTTTACTTGAAAGAACGACTGACAGACAAGCTATCAGA
CTTGGGTATTTGGCAGACATTTTCTCGAAAATGAACGAAGTGAGCCTGTC
ACTTCAAGGAAAACAACTGACAGTATTTGTTGCCAATGATAAAATTCGAG
CTTTCAAGCGAAAATTAGAATTTTGGAAAACTTGTATCCGCCACCGTGAG
CTTGACAGCTTCCCAATACTTAAAGACTTTTTCTGATGAGATCGGTGGTG
ATATTAACGAATGTGATTTTTGATATTGTATAATGAATGTGTCAACATTT
GGAAGATCTGCATAACTCAGTGAACCAATATTTTCCAAATGACCAATGCA
TGATGTTACAAAATCGTGCATGGGTAAAAGATCCATTCAAAGTGCAAGAC
AGACCAATGGATTTTAACGTAACAGAGTATAAAAGTTCATTGATATGGTT
TCAGATTCCACATTGCAACTAACCTTTAAGAAACTACCACTTGTCGAGTT
TTGGTGTAGTATCAAAGAAGAATATCCACAATTATCTGAAAAGGCTATTA
AAATACTCCTCCCTTTTCCAACTACATATCTGTGTGAGGCCGGATTTTCT
TCATATACTTCAACCAAAACAACATACACAACAGATTGAATGCAGAAGCA
GATATGAGAATCCAGCTGTCTTCTATTAAGCCAGACATTAAAGAGATTTG
CAAAAATGTAAAACAATGCCACTCTTCTCACTATTTTTTTGTTTTGGAAA
ATATAGTTATTTTTCATAAAAATGTATTTATGTTAACATGTAATGGGTTT
ATTATTGTTNAATGAATTAATAAATAAANATTTCTCAGTTTTAATTTCTA
ATATGGTAAATATCGATAGATATAACCCACATAAACAAAAGCTCTTTGGG
GTCCTCAATAATTTTTAAGAGTGTAAAGGGGTCCTGAGACCAAAANGTTT
GAGAA
>rnd-4_family-1299#DNA/hAT-Blackjack ( Recon Family Size = 49, Final Multiple Alignment Size = 49 )
GGGTTGCCAGATTTAGCAAATAAAAATACAGGACGCCCAGTTAAATTTGA
ATTTCAGATAAACAACGAATAATTTTTTAGTATAAGTATGTCCCATGCAA
TATTTGGGACATACTTATACTAAAAATTATTCGTTGTTTATCTGAAATTC
AAATTTAACTGGGCGTCCTGTATTTTATCTGGCAACCCTA
>rnd-4_family-115#LINE/L1 ( Recon Family Size = 53, Final Multiple Alignment Size = 49 )
AGGGCAAAATNAATCTATGGTGTTAAAGTCAGGATAGTGGTTACCTTTGG
GAGGGTAGTGACTGGAAGGGGCACGAGGGNGGCTTCTGGGGTGCTGGTAA
TGTTCTGTTTCTTGATCTGGGTGNTGGTTACATGGGTGTGTTCACTTTGT
GAAAATTCATCGAGCTGTACACTTACGATTTGTGTGCACTTTTCTGTGTA
CATCATTCAAAAGTTTACTTTAAAAAACATCATATACAAAAGTGACAAAA
ATGATGATAGCCTAGAAATAAACCTGATTAAAGAACTGTGCA
>rnd-4_family-74#DNA/hAT-Charlie ( Recon Family Size = 48, Final Multiple Alignment Size = 48 )
TGGCTACTAGAAAATTTTAAATTACATATGTGGCTCGCATTATATTTCTA
TTGGACAGCGCTGGT
>rnd-4_family-137#DNA/hAT-Blackjack ( Recon Family Size = 50, Final Multiple Alignment Size = 48 )
GACCATACGTCCCGGTTTGCCCGGGACAGTCCCGGTTTACGCCTGTTGTC
CCAGCGTAATTATTAATAGCGCCCCTTTCACTCTCAAAAGTGTCCCGGTT
TGGACGATAAATT
>rnd-4_family-517#DNA/hAT-Blackjack ( Recon Family Size = 44, Final Multiple Alignment Size = 42 )
GGTGACCAATCGTCCCGGTTTGCCCGGGACTTTCCCGGTTTTAGCACTGA
AAGTCCCGCGTCCCGGGAAACCCCTCAGTCCCGGGCAAACCGGGACGGTT
GGTCAC
>rnd-4_family-19#LTR/ERVL-MaLR ( Recon Family Size = 50, Final Multiple Alignment Size = 41 )
ATCTATTTCCTCTCCCCTTGATTCTGGACTGGCCATGTGACTTGCTTTGG
CCAATGGGACGTTAGCAGACATGACGCAAGCAGAGGCTTGAAAAGCGCTT
GTGCATTGGGNCTTGCCCTCTTGTGGCTCCCAGACCCTGAGACTCGGGAC
TGCCTGCCGGTCGACGAGAGACATGCGGTTGCCCCTGTTGCCCCAGCCAG
TCAGCCTCCAAATACCAGACATGTGAGTGAGGCCGTCCCGGATCANCCAG
CCCCCAGCTGACCCCCAGGTTGNCTAGCCGACCGCAGGCAAGTGAAGGAT
CCCAGCCNAGACCAGAAGAACTCCCTGCACAGACCCCAGAATCATGAGCT
AAATAAATGNTTGTTGTTTTAAGCCACTAAGTTTTGGGGTGGTTTGTTAC
GCAGCAAAAGCTAACTGAT
>rnd-4_family-65#DNA/hAT-Charlie ( Recon Family Size = 42, Final Multiple Alignment Size = 41 )
GGGTCGGCAAACTACGGCCCGCGGGCCAAATCCGGCCCGCTGCCTGTTTT
TGTACGGCCCGCGAGCTAAGAATGGTTTTTACATTTTTAAATGGTTGAAA
AAAATCAAAAGAAGAATAATATTTCGTGACACGTGAAAATTATATGAAAT
TCAA
>rnd-4_family-1417#DNA/hAT-Charlie ( Recon Family Size = 42, Final Multiple Alignment Size = 41 )
ATTCTCAAAGTGTGGTCCGGGGACCTTCAGGGTCCCCAGAGACCCTTTCA
GGGGGTCCGCGAGGTCAAAACTATTTTCATAATACTAAGACGTTATTTGC
CTTTTTCACTCTCATTCTCTCACGAGTGTACAGTGGAGTTTTCCAGAGGC
TACATGACGTGTGATATCGCAACAGACTGAATGCAGAAGCAGATATGAGA
ATCCAGCTGTCTTCTATTAAGCCAGACATTAAAGAGATTTGCAAAAATGT
AAAACAATGCCACTCTTCTCACTAAATTTTTTGTTTTGGAAAATATAGTT
ATTTTTCATAAAAAATGTTATTTATGTTAACATGTAATGGGTTTATTGTT
ATTTTAAATGAATTAATAAATNTTTAAAATTTTCTCAGTTTTAATTTCTA
ATATGGCAAATATCGATAGATATAACCCACATAAACAAAAGCTCTTTGGG
GTCCTCAATAATTTTTATAAAGGGGTCCTGAGACCAAAAAGT
>rnd-4_family-39#LINE/L1 ( Recon Family Size = 43, Final Multiple Alignment Size = 39 )
CTNCTGGNCAAGGTGGTAACAGCAGGGGNTGGATTTGCCCTCTTGTCCCT
AGCAACTGAAAACTANATAAAATAAAGGAAACAACAGTTTTCAGACACTG
GACATCAGGCANCGNAAGACAGCGATCCCTGAGAGANGAGAAACAAATGA
GGTGAGCCCTACGNTTGCCAGCTTCTTCCCGGAAGAGTTTCCGGGNCGAA
GCGNAGGGAGCAAGGTCCCAGCTGTCTCNNTGNGTTGAGGAGATAGAGTN
GGGAGTCTGAGGAGGCCAAGGCAGCTGGAGTTCGCAGGACAGAGAACTGC
AGAGGAGAGNGCTTCTCAGAGAGAGAGAGCTCCAAAGATCTGCAGAGGGT
TCCCCTCAAGTATTCAGCTGAGTACTGATTAGCACATGCACGTGAGGAAA
CTACCCAAGGCTGAGGAAAGAACACNCGAAAGGAGCAGAGGAAACAATTT
CCAAATAACGCGAAACTGGAATGCCTTGTATCCCTTTACCAAGCAGANTG
GAAGACCTCATAAANCATGGGGCATCGGGTNGANTACTTAGGAGGNTNTT
GCCTCGGTAGTGGAGGATATTTAGACTCAGACTGAACGNTGNTCTCAATC
CTGCCTGAAATANCGTTGAAAAGCAAGATCCCAGCAGGATCNAACTNCTT
CCGNGCAACTTGANTGCNTCCGAGGAANAAAGCTCAANAATATTTGATAC
GNANTACNGAAACGGCCAGCACCGACAAGTTAAAATTCACAGTNTGGCAT
CCAATCGAAAACTNCCAGGCGTGCAAAGAAGCAGGAAAACATAACNCACA
ATGAGAAAAAAATCAATCAACAGAAACAGACCCAGAAATAACAGANGNTA
GAATTAGTANACAAAGACATTANAACAGTTATTATAACTATATTCCATAT
GTTCAAGAAGTAGAGTAAAGTGAGCATGTTAAGTAGAAACGAGAAATTAA
AGAAATNAAACTTCTAGAGATGAAAAGTACATTCTGAAATGAAAAATACA
NTGGATGGGATTAACAGCAGATTAGACACTGCAGAAGAAAAGATTAGTGA
ACTTGAAGACATAGCAATAGAAACTATCCAAAATGAAACAGAGAGAAAAA
AAATTAATGAANAGAGTATCAGTGAGCTGTGGGACAACTTCAAGCGGCCT
AATATACGTGTAACTGGAGTCCCCGAAGGAGGAGAGGACAGAAAATATTT
GAAGAAATAATGGTTCCAAATTCGATGAAAACTATAAATCTANAATTAAA
AAGNCTCAACGAACNCCAAGCACAAGAAACATGAAGAAAACTACACCAAG
GTACATCATAATNAAATTGCTTAAAACCAGCGATAAGAGAAAATCTTAAA
AGCAGCCAGAGAAAAAAGACACGTTACGTACAGAGGAACAAAGATAAGAA
TGACAGCAGACTTCTCATCGGAAACAATGCAAGCCAGAAGACAGTGGAAC
GATATCTTTAAAGTACTGAAAGAAGAAACATATGTCAACCTAGAATTCTA
TACGCAGCGAAAATATCTCTTAAAAANAAAGGCGAAATAAAGACNTTTTC
AGACATANAAAAACTGAAAGAATTCATCACTAGCAGACCTGCACTACAAG
AAATATTAAAGGAAGTCCTTCAGGCAGAAGGAAAATGATACCAGNTGGAA
ATCTGGATC
>rnd-4_family-13#LINE/L1 ( Recon Family Size = 47, Final Multiple Alignment Size = 39 )
CTGCAATTGGTAAGCACAAATATGTTTAAATCCATGAGTTCATAATGATA
TTAAGAAAGCTGGGAAACCAACTCATTATTTTGAAAACTGTTAAAGGAAA
GAATCAAGCATTTATCCTGCCTTTCCTATANGAATTATACCTCCGAGTAG
CTGAGGGAAAGTTCCTCTTTATAGAAGNATTCCAGCAATAAATGAAGAAA
GAATGATAGAATTAGAATATCACCATTTTGCAACCCCTAATGAANTAATG
GATCTAGGCANTGANCATCAACGGCTGCCATCAAAAAGAGAGACAACCAC
GTTATGTGCCTCCTGATGGAAGNACACGNCACCACCTATGAAGTANTCTT
GCCAAAAAATAATAATGAACCTGAATCTGATCAAGCCTCTAGATCTAACT
ACCAATTTACAGGAAATACGGAGAATAGAACATGCTAAGACACCACAGGA
AAATTCTGCAGGACAAACGACCCGGNTTCTTCAACAAATAAATTANAAGA
GGGA
>rnd-4_family-80#LINE/L1 ( Recon Family Size = 76, Final Multiple Alignment Size = 37 )
AGANTGNCTCTCNATGATGGAATAAGCGTAACTGTATAACCTAATGATTT
NAAAAGTNANAGNGTGAAGACTTCCGGTTTCNGGTCCGACATGTAAAGAG
CTTGGAAGTCGTCACTCCGTCCTTACAACAAGNAAAAAGCCTGAACAAAC
TGAAAATCAACGACTCTTCTTGGATCCGTCAGAGAANTGAGGTCACAGGG
CAAACCGCCGCCCCCAAANCTGGAGAGACAGGAGATACAGAGAATCACAG
CTTACCAGGAGCAGAAGCCCAGAGAAACCGCCACTGGAGCCAGTACCGGT
AGGAANACTTAAACTGTAATTGACGAATTGCTGGAGGCTCAGTGTGGACT
AGTCTGAGAGTTAAAAACGCGGGGCCCAGTCTTGGGGGGCCCCACACTTT
CGTGGGTTTTACCTCCAGGAGCCCCACCAGGTTCTCACGGTGAANACCGG
AGAAAAATCCCCTCGTGCTTCCGGCAGGGGGAGGGGAAAAGTAACCATTT
TGAAATATGCCCAGAGCATTCTGTTCTTCTTAACAAGGCCTGCCCTCAAG
GGAAACTAGTTACCAAGACCAACCCGCTGGGTTTTACCAGAGCCTAACCG
ACCTGGGGGAAGGGAAATACCCAACTCCAGCCCCCTCTAGCCTTCCTGTC
TCACCTAAGGGGAGAGGAAACTGAGAAACACTTGTGAAGNTCACAGCCCA
GGGGCACAGGCCCACTAAAAGACTGAGACCTAATCACAGGACTATAGAAC
ACTTCCCCTCCCCCCACACCTTACCACCACACCAAGGGCTCCANTACAGC
AGTGGATTACAGCTGAAAGAACTGCAAGACTCAGACTCTATCTAAGGAAG
AGTNCTTAGGGAAACCCAAAGACAACAGAGGAGACAAAAACAAGGACACT
AGAGGAATTTGAAGCCTCTGGCACCTACAGCTACAGNAAACATTAAACAC
AGCCCAACTCCTAGCCAGATAAACATAAAATCTCACACTAAAGGCCTATT
TACNNCAGTTCCTTTTACCCGGTACATCATGTCCGGCTTTCAACAAAAAA
TTACAAGGCATACTAAAAGGCAAAAAACAGTTTGAAGAGACAGAGCAAGC
GTCAGAACCAAGACATGGCACGGATTTTGGAATTATCAGACGGGAATTTA
AAAAACTATGATTAATATGTTAAGGGTCTAATGGANAATAAATAGACAAC
ATACAAGAGCAGACGGA
>rnd-4_family-228#LINE/L1 ( Recon Family Size = 43, Final Multiple Alignment Size = 35 )
TGCCGGGGAATNCCAGGATGGAATGCAAACTGTAACAAATGANTTTAACT
GTATTACAAATGAATGANATAATCNCACTGAAGGGGGTGGGGGGAAGTAC
TGACCTAAGTAACTTTGAAATGAGTGGANATCTGTAAGACTAAAGACAAA
AGGAACTGTACATAAGCACTGTACTCTAGTTGATAAAGTCGTTTCCCNCG
GGGGTATGGGTTAACAATTCTGANACTACTNTACGTGTATACTGGAATTG
AGCAATAAGTAAATGGATGGTGGATGGTGGGAGCCAGGTTTCTCACTGTT
GGAGNGGGAGGTTACAGATAAGCAAGGGGAAGAGGCTAGAATGATCCATG
TGGTANTGGATTAGAGTTGGAGACATCAGTATGAACTCATGTTTAGCTTA
ATATATGATACAGATGGTACATACAGAAATANTTATAGATATGTGTATAT
ACACGGGTTAGTATACACACATATATTTCCTNGCTCTGTCCGCTGAGAGG
GCCTAGAAGCAATGACACCCCAGTAGCAACGAGCACACC
>rnd-4_family-2#LTR/ERVL-MaLR ( Recon Family Size = 40, Final Multiple Alignment Size = 31 )
GTATATAAAATAGNGTATGCTCAATGACTTCTGAGGCTAGGTCATGAAAG
CATACGGCTTCCGCCCGGCTCCTCTTTGTCTNGGGATGCTCGCTCTTGGA
ACCCGGCCACCGTGCTGTGAGGAAGTCCAAGCTACCCACACGGAGGAGCT
GAGGTCCCCAGCCGACAGCCAGCACCAACCGCCAGACATGTGAGAATGAG
CCTTCAGATGATTCCAGCCCCCAGCCTCCGAGCCTTCCAGCTGAGGCCCC
AGACATGTGGAGCAGAGACAAGCCGTCCCCGCCGTGCCCTGTCCGAATTC
CTGACCCACAGAATCATGAGCATAATAAATGG
>rnd-4_family-116#DNA/hAT-Charlie ( Recon Family Size = 32, Final Multiple Alignment Size = 30 )
AGCGCTGTCCAATAGAACTTTCTGCGATGATGGAAATGTTCTA
>rnd-4_family-31#LTR/ERVL ( Recon Family Size = 33, Final Multiple Alignment Size = 28 )
GGACGCTGTGATGCGCCGCCCAGATCCCCTTCAGGAAGGACNTGCTGCCC
CAGCTGCTAGGAGTGCTGCGGGCAGCCCTTTCAGNGACCGCCCTAGCTGC
GGAGAGCCTGTCANCCAAGGTCACGCCCCTTCCCAGGGCAGCCCACATCC
AGTGACTGATCGTGAGGGAGTATAAAGGCCCGGCATCTTGGCCCAACTCG
GGACANCTCTGAAGGGCCATCCCAGCTCCAGAGCTCCCCGCGGGGTTGGC
CGAGGCCTCGTTGGGCCTGCATCGCAGCCCGACGTTTCCCTCTGCCCAAT
CCTGCTTCCTTCCCCTCCTTTCCACAGGTGTTGATCCCGAGAGCACTCCC
TAATAAACATCCTGCCCTCTAATCTCCATCTCAGGTCTGCTCCACGGGGA
ACCCAGCCTGCA
>rnd-4_family-513#DNA/hAT-Charlie ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
GTCTATGGATAGAATTCAGGGGGTCCGTGAACTTGGACGAAAAAATTACA
CCTTTATTTTCACTAACCTCTAACTGAAATTTAGCATTTCCTTCAATTAC
GAATGTAGGCAACAAACCACAGTAGTGTTAGCAGTACCTGTGACTTTGTC
ACCAATAGAAACACAGATATTTTCATATCACATTACAGTTGTTGCAGATA
TCTCGAAATATCGTTTATGCTCATCACTACTTCGAAATTACGGTAGTTNT
TAGACCCGCCGCTAGATCTTGTTATTAATGCAATAAAGAAGCATCCATGT
ANTATATCACAAANTTTTTAANATTTTGATAACCGTATTTCAATATAATT
GGTTTCCTTTGTAATCCTATGTATTTATTTTATGCATTTAAAAACATTAT
TCTAAGAAGGGTCCGTAGGCTTCACCAGACTGCCAAAGGGGTCCATGGCG
CAAAAAAAAAAAACAAACGATCAAAAGACACTTGGGAAGGTCNAATGTAA
AGAATNATTAACTATAANAAGGAACTGGAA
>rnd-4_family-402#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 27 )
AGTCCATACTGATATAAATAAATGATTGAATAAATAAATGGAGGAGAACA
GACAAATCTCCCATGCAGAATTCCAAATAATTTATGTAGATACTCCGCCC
TNAAGGAGGTGGAGCATAACTCCCCGTCCTTAAGTGTGGGCTGCGCATAG
TGACTTCCTTCCAAAGAGTACAGTATGAAAAAGAGTAACTTTACAGTGGA
GAAACCTGACAAACACTATCTCAGCCAGGTGATCAAGGTCAACATCAACG
GCGATAAAGTCATGTTGACGTATGTACCCTTGATATGATGTGATGAAAAC
GGCACTTTAT
>rnd-4_family-365#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 27 )
TTGATATGCTCTCATAAAATCATGTCTCTTTCCTTCAGAGCACTTATCAG
TTTGTAATTATACATTCATTACTGTGGTTATTAGATTAATGTCTGTCTCT
CCCGCTAGACTGTAAGCTCCGTGAGGGCAGGGACCNTGTCTGTCTTGTTC
ACTGCTGTATCCCCAGNACCTAGCACAGTGCCTNGCACACAGTAGGTACT
CAATAAATATCTNTTGAACGAATGGACGTGAGTGAAGAAATGTCGANGAG
ATAGATA
>rnd-4_family-15#DNA/TcMar-Mariner ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
TTGGTTGAACCATATGAAATTGCCGATATTCGACCGTTTTTGACCTACAA
AACGGCAATTTCATATGGTTCAAC
>rnd-4_family-369#LINE/L2 ( Recon Family Size = 28, Final Multiple Alignment Size = 25 )
CTGCTCCTNTGCAGCCCTCTCAAGTGGTGNNTGTTTNTTCTCCCACACCC
TCATAGCNCNGGGCCCGCGTAGNGTGTAGCATTNCTTCTCGGTCCNCATN
GCCGCTTNTANACCATTCTCCCTCCCCTACCTNCAAACACTTATGGCTTT
GAGTCTTACGTCATCAGACTAAGTCGACCAGCACCAACCCTCCTTGTCGC
ATTCGTCCACCNTTTGCAATCACCTNCTACTGGCATCACGTCCCCTCATC
CCTNGAANNTTTTGGCTCTGGCTATNNTCCTTCCTAACGGCACTCCTGTC
ACAGTCCCTGATGATTTTTCTTCCAATCTCCTGGCACTGAACTCCTCTCC
TACAGTGAGTCTATCTTCCATTCTACTTTAGCCATTCACTCCCATGGTGA
TACAGAGACCTTGGCACTACCCATAAGTACAATCTCACCATAATTTCCAC
TTTGAAGACCCCTCTTTCTGGCATTGAACTACCTTTCCAACTCTCCTCCT
GTAGGTTCCCAAATCCAGCAATCCTTTGATTCCACCAGGACCTACAATTC
ATTGATCCTACAAGTTTTCCCCTTCCTTCCCCTTTTTAGGCAGCTTGATT
ACATGGTCCATTATTATACTGATTTTCATATACCATCAACTCCCTTGCTT
CTTACTTGATTTTTTGTACTTTCCTGGAAAAAACACCATCTGTTTAATTA
CATCCTTGGTCTTCTCCCCACATGCACCCACNCCCANACAGTTGTANATG
GCTGGAGAACAACCGTGNTGACTGATNTCACTTTAAATTTATGACCACAA
ACCTCAAGTGGGCTCTTAGAGCTGCCCGGCANTCCTACTACATTTCCCTA
GTCAATTCACTCTCTTGCTCTCCTAGACGATNACTCACACTTTCTCTCTC
CTCAAACCTCCACCTCCTCCCCNTTCACTCTCAGCCGATGACCTTGCTTC
TATTTCACTGAGAAATAGAAANCATCAGAGAAGAACTACCATCATCTACC
CACCAACCTCCGCCTGNCCCCGTGTACTCTGCCTTCCCTTCTGTTNCTGT
AGGATGTCTGAGCCAGTCCTCTATGGGATGCCATTCCCCTCTTGNCTATC
AAAAATACTCTCCCGCAATTGTCTCCTTCTCCTGCGTCATCNATTTTCTC
CTCTCCTAAACATTCCTNTCAGCGTCATAAACATGCTGAAGTCTCTCCCG
TNCTATTAAAAAAATCTCTGACCCCATATCCCTCTCCAGCTANCGCCTCC
GTTTCTCTACTTCTCTTCGACAGCGACACTCAAAAAGGTTGTCTACACTT
GCGTCACCCATTCCTCTCCTCCATTTTCTCTTGGACATCTTCAGTCAGGC
CTTCGTCTCCGCCCACTCCACCGAAACTGCTCTTGAAGGTCATCAGTGAC
CTCCATGTTGCTAAATCCAAGGACCGATTCTCAGNCCTCATCTTACTNGA
CCCCTCAGCAGCATTTGAAGTGTTGATCACTGCTCCTTCCTTGAAAGCTC
TGTCNCTTGGTTTCCGGGACACCGCGCTCTCTTGGTTTTCCTCTCACCTC
NCTGGTCTCCTTCCCAGTCTCCTTTCCTGGTTCCTCTGCCTCCCCTTGCC
TCTAAATGTTGGCGTGCCCCAGGGCTCTGTCCTCGGAATTCTCTTTTTAC
NGGCACTTACTCT
>rnd-4_family-151#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
AGAAAGAGAAAAGCAGCCCCTGACATCCGGGAACTGGCCTGGCGCTCACA
GCTAGGCCTTGGCTGTTGGAAGCTGGCCTGGCACTCACAGCTAGGCCGTG
TTGTTCTCCTGTTGGACATAAACAATCTCACAGAACACCAACGTCAGACA
AGGCCACTCTGTGACCGTGACGGAGTGAGACAAAANAAGACCACTCCGTA
ATCGTGTCTAAGCACAGACAAAAACAAGATCACTGTGCAANCCACAAAAT
ACCAAACATCCCCTCTCGGCTAANATGAGTGACTGCTTCTTTACCAATTA
CAGCTTTAGCCTCGGTCTTCCTTCTAGAGAAGATTTATTAAGATACCCAA
TCATAGAATTGCCCCTGCTTCCTGACAGCATCCAATCTCCCGAATCACCT
AATCAAAGCCCAAATCCTNTAATAAGTCCTTCCTAACACCCTCTTACTGA
GACGCCCCACGGTTCCCCATGGTGTGCGTTCTCCCTCACTGCAACGAGTA
ATAAACCCAACTTGTTCAACTACAGGTGTGTTCCTGGTGGTCTTTGGCTG
GAGG
>rnd-4_family-33#LTR/ERVL-MaLR ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
CATACTTCTCCGNCCCACTGATTGGCGCNTGGCCACGTGACTTGCTCTGG
CCAATGAAATGTGAGCGGAAGTGACGTGTGCCATCTCCGGGCAGAAGCTT
TAAGAGCCAGCGCGTGGTTCGTCACGTGTCTTTTCCTCTGCCATGAGACC
AGCAATGTTCCAGACGGNGGCCGCTCCGTCAGCCTGGGTCCCAGAGTGAA
GATACATGGAGCAGAGCCACAGTCAACCCGCGATGGACATGNAGCGTGAG
TGAGAAATAAACCTTTGTCGTTTAAGCCACTGAGATTTGGGGGTTACTTG
TTACCGCAGCATAACCTAGCCTATCCTGACTGATACA
>rnd-4_family-245#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
TTAGAAATAAGNAATGAANAACCATCTCCAGAAGCCTGTGGAAACAACTA
TTAGAAAATCTCCNAGAAAGTAAAACCTGAAAGCAANAAGAAANNAAAAA
TAAGAAGAAAGACGGATGAGGAAATGGANCANTCTAGGAANTCAATATCT
AAATAATAGGATCCAGAAAAGGAGAACNGAGAATAATGGGAGAATCATCA
AAGAAATCAGNAAATTTTCCCCAGAACTGAAGGACATGAGCTTCCAGNTT
GAAGAGGCCCACCGAGTGCCCAGCACAATGAATGAAAATAGACCCACGCG
AAGGNACATCATTGTGAAATTTCAGAACACTGGGGACGAAGAGAAGATCC
TAAAAGCTTCCAGAGAGAGTAGAAAAACAGGTCNCATGCAAAGGATCAGG
AATCAGAATGGCATCGGTTCTCAATAGCAACGCTGGAAGCTAGAAGCAAT
GAGCAATGCCTTCAAAATTCTGAGGGAAATNATTTCCAACCTAGAATTCT
NTACCCAGCCAAACTATCAATCAAGCGTGAGGGTAGAATAAAGATATTTT
CAGACGTACAAAGTCTCAAAATTTACCTCCCACGCACCCTTTCTCAGGAA
GCTANTNGAGAACGTGCTCCACCAAAACGAAGGAGTAAACCAAGAAAGAG
GAAGACGTAGGTGGGATCCCAAGCAAGGGGCCCAAGANAATTAAGGCCGA
GGGGAGACAAGAATGCGTGAAGCANGCTTAGAAAGCAGCACTTCTCGATC
GGCACAGGGTGACGAGGGCTCTACGAGAGCTGTCTCCGGAAAGNTAAAAA
TAAAATACCTGATTTGTTTTNTATTGAGAGGAGATTT
>rnd-4_family-1046#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
ACTCTCTCCTTGACCAAACTTTAGTCAGGCTCCTCTGAGCCCTCTTCTCG
ACTAGGCCTCGACCTTGGGCTTCCTGTCCGTCTTTGCGAGTCCAGTTTTA
GCAAGAATCCTGCTAAGTCAGTTTAGCGAGAATCCCCCACCCTCGATATC
TGATCACCCTCTATGATCGGATTCCTCATCCCCCACCCTCGATATCTGAT
CACCCTGGCCTGCCTTCAGCAAGAATCCTGTTAAGTCAGTTTAGCAAGAA
TCCCCCTACCCCTGATGTCTCCTCTTAGTAATTTTCCATCCACTGACCCC
CACCCTGCTCCTTGGCTATAAATCCCCACTTGTCCTTGCTGTATTCGGAG
TTGAAGCCCACCTCTCTCCCCTACTGCAAAAC
>rnd-4_family-17#LINE/L1 ( Recon Family Size = 46, Final Multiple Alignment Size = 24 )
TAGAAGTCAATTGCTTTCCTATATACCAATAATTAAGAAGTGGAATCTGA
AATTAAAAACACAATACGACATACATTATCACCCAAAAAACTGAAGCACT
TCAGCATGAATTTACCAAAATATGTAAAAGATTTATATGAAGAAAACTAC
AAAACTTTGATGAATGAAATTAAAGAAGAACTGAATAAATGAAGAGAGAT
TCCACATTCAAGGATAAGAACATGTCCTTGGGCTTCCCTGGTGGCGCAGT
GGTTGAGAATCTGCCTGCCAATGCGGGGGACGCTGGTTCGAGCCCTGGTC
TGTGAAGATCCCACATGCCACGGAGCAACTGGGCTCGTAAGCCACAACTA
CTGAGCCTGTGCGTCTGCAGCCTGTGCTCCACAACAAGAGAGGCTGTGAT
AGTGAGAGGCCCATGCACCGCGATGAAGAGTGGCTGCCGCTTGCCGCAAC
TAGAGAAAGCCCTCGCACAGAAACAAAGACCCAACACAGCCAAAAATAAA
TAATAAATTAATTAATTATTTTTTTTAAAAAAGGATAAGGACATGTCTGG
AAAGCTCAACATTGTTNAGATGTCAGTTCTTCCCAGCTATCTATAGATTC
AATGCAATCCCAATCAAAATCCCAGCAAATTATTTTGCGGATACAGAAAT
ATTCTAAAATTTATATGGAANAGCNAAGGGTCNAAAATAGCCAAGATAAT
TTCGAAGAAGTACAAAGTTGGGGAACTAACTTCCTAACCTCAAGACTTAC
TATANGGCTATAATAATCAAGATAGCGTGGTACCGNCGGAAAAAACAGAC
AACTAGATCAATGGAACAGAANNGAGAGCCCAGAAATAAACTCCCCATAA
GTAGAGTCAACTGATTCACTTCGCTGCACAGCAGAAACTAACGCAACATT
GTAAAGCAACTATACTTCAATAAATGGNACTTGAACTAANAAAANACCCA
CATGCAAGGAAGTGAACCTCGACACNCACNTCACACACTTCACATTCAAA
GTTAGCNCGAAGTGGANCATANACCTANACATAAGAGGCAAAACTATCAG
ACTCCTAGAAGACNNCAGAGGAGAAANTCTNNGTNACCCTGGGTCATGGC
AAAGATTCTTCCTAGATACGANACNAAAAGCANTATCCATGAAAGAGAAA
ATAAACCGGACTTCATTAAAATTAAAAATTCTTNTCTGTGAAATGCANTA
TTAAGAGAATTAAGAAGGCAAGCNCATGGTCCAAGAAAATATTTGCAAAA
TACATATCTAATAAAGGACTNATATCCAAAATACTNAAAGAACNCTTNCG
AACTCAACAATGAGAAGACAAAGACAATAAAAAACGACCCCCAAACCTTA
ACAGACACTTTACCAAAAACGACAAACAGATGGCAAATAAGCACATGAAA
GATGCTCAACGTNATTCGCATTAGGAAAATGCAAATTAAAGCCAAATGAA
ATACCACTACACACCTATCAGAACGGCTAAAATCCAAAANGNTGACAACA
CCAAGTGTTGGCGAGGATGCGGAGCAACTGGACTCTCGTACGTTGCTGGT
GGGAATGCAAAATGGTGCAACCACTTTGGAAGACAGTTTGGCAGTTTCTT
ACAAAATTAAACATACNCTTACCATATAACCCAGCAATCACGCTCCTAGG
TATTTACCCAAGAGAGATGAAAACNTATGTCCACACAAAAACCTGTACAC
GAATGTTTATAGCAGCTTTATTCGTAATAGCCAAAANTTGAAAGCAANCC
AAATGTCCATCAACAGATGAATGGATAAACAAAATGTGGTACATCCACAC
AATGGAATACTATNCAGCAATAAAAAGGAACGAGCTACCGNTACATGCAA
CAACACGGATGAATCTCNAANGCATTATGCTGAGTGAAAGAAGCCAGTCN
CAAAAGGTTACATACTGTATGATTCCACTTATACGACATTCTGGAAAAGG
CAAACTATAGAGACGGAAAGCAAATTAGTGGTTGCCGTTTTAGGGCTGAG

>rnd-4_family-633#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 23 )
TGGCAGATTCAACAAAAAGGAGTAAAATACTTTTTTGTCAAATACATACA
CTGAAGTAATTGGCAAACAGTAAAACTGTGCATGGGGGGCTTCCCTGGTG
GCGCAGTGGTTGAGAGTCCACCTGCCGATGCAGGGGACACGGGTTCGTGC
CCTGGTCCGGGAAGATCCCACGTGCCGCAGAACGGCTGGGCCCGTGAGCC
ATGGCCGCTGAGCCTGCGCGTCTGGAGCCTGTGCTCCGCAATGGGAGAGG
CCATAGCAGTGAGAGGCCCGCATACCGCAAAAAAAAAAAAAAAAACTGTG
CATGAACATATATTCTAAGCACAATCCTTGAAAGTAAAATAAATCTAAGT
CAAGAATAATGAAATCAAAAAACAAACAAAAACCGCACATACTGTATGTT
CACATAAANACGNGTATGAATGTTATAGCATTATTATTCACAAAAGCCAA
AAAGTGGAAAAAATCCAAATGTCCATCAACTGATGAATGGATGAACGAAA
TGCAGTATAATACATATNGTNTATCCATACGGTGGAATACTATTCAGCAA
TGAAAAATGAANNACTGATACAGACTACAACACGGATGAACCTCAAAAAC
ATTATGCTGAGCGAAAGAAGCCAGACACAAAAGAACACATACTGTATGAT
TCCATTTGTATGAAATTCCAGAANAGGCAAATCTATGGAGACGGAAAGTA
GANCAGTGGTTGCCTCTGGGGAGGGAGCGGGAGTGACTGCAAAGGGGCAC
GAGGTCTTTCTGGGGTGATGGAAATGTTCTANATCTTGATCGGGGTGGTG
GTTACACGACTNTGTAAATTTACTAAAANTCACTGAGCTGTACACTTAAG
ATCTGTGNATTTTACNATATGTAAATTATACCTCAATAAAGCTGTTTTAA
AAAT
>rnd-4_family-158#LTR/ERVL ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
GTGGCGGCCATGAGGTGCACCGCTCAGACCTTCAGAGGCCTGCTGCGGGG
AGCGTAATTGACTGACAGNCTCCGGCTGCTGCGCCTCCGGATCCACCACC
GCGTTCGCGCCGAGGCCACGTTTCCCCCGGGCTGCTCCCAGCCAATGACT
GAGCGCGGCGGGGGTACTAGGGCAGGCCCATTCCTGCNAGACGCGGGACT
CCTCTAATGGCNANCTTGGCTCGAGGACTCCCCATCGGCCTNGCCGAGAC
TTTCTTAGAACTGCGCTGTGGTCTGAGGCTCTTCCTACCCAATCCTTCCT
TTCCTCTCTCCTTTCACAGGTGTCAGACCTGCATCGCGGTCTGAAGGCTC
TCCCCGCCTACTCCTGCTCCCTTCCTTTATCTTTCACGGGCGTTCCCCTC
AATAAATCTCTTGCACGTCTAATCCCGTCTTGGCGTCTGCTTCTCGGA
>rnd-4_family-217#Satellite ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
TGTGAGGGCGCGGGTTAGTGTTAGCGTACGGGTTAGGATTAGGGGACGGG
TGAGGGTCAGGCTTCGGGGAAGGGTTAGGGTTAGGGTTCGGGCTAGGGTT
AGGGTTAGGGGACGGGGACGGTTTAGGGTCCAGGTGAGGGTACGACAACG
CTTTAGGGGGAGCGTGCGTGTGAGGGCGCGGGTTAGTGTTAGCGTACGGG
TTAGGATTAGGGGACGGGTGAGGGTCAGGCTTCGGGGAAGGGTTAGGGTT
AGGGTTCGGGCTAGGGTTAGGGTTAGGGGACGGGGACGGTTTAGGGTCCA
GGTGAGGGTACGACAACGCTTTAGGGGGAGCGTACGTGTGAGGGCGCGGG
TTAGTGTTAGCGTACGGGTTAGGATTAGGGGACGGGTGAGGGTCAGGCTT
CGGGGAAGGGTTAGGGTTAGGGTTCGGGCTAGGGTTAGGGTTAGGGGACG
GGGACGGTTTAGGGTACAGGTGAGGGTACGACAACGGTTTAGGGTGAGCG
TACGTGTNAGGGCGCGGGTTAGTGTTAGCGTACGGGTTAGGATTAGGGGA
CGGGTTAGGGTNAGGCTTCGGG
>rnd-4_family-67#LINE/L1 ( Recon Family Size = 29, Final Multiple Alignment Size = 22 )
AGAGAAGAGCTAACACCNATCCTTCTCAAACTCTTCCAAAAAATTGCAGA
GGAAGGAACACTCCCAAACTCATTTTATGAGGCCAGCATNACCCTGATAC
CAAAACCAGACAAAGATACTACAAGAAAAGAAAATTACAGACCAATATCA
CTGAATATAGACGCAAAAATCCTCAACAAAATACTAGCAAACNGAATCCA
ACAACACATTAAAAGGATCATACACCATGATCAAGTGGGATTTATTCCAG
GGATGCAAGGATNNTTCAACATACGAAAATCAATCAATGTGATATACCAC
ATTAACAAANTGAAGAANAAAANCATATGATCGTCTCAATAGATGCAGAA
AAAGCATTTGACAAAATTCAACACCTATTTATGATAAAAACTCTCNANAA
AGTGGGCATAGAGGAAACTACCTCAACNTAATAAAGGGCATATATGACAA
ACCCACAGCCAACATCATACTCAATGGTGAAAAACTGAAAGCTTTTCCTC
TAAGATCAGGAACAAGACAAGGATGCTCACTCTCACCACTTNTATTCAAC
ATAGTATTGGAAGTCCTAGCCACGGCAATCAGANAAGAAAAAGAAATAAA
AGGAATCCAAATCGGAAAAGAAGAAGTAAAACTGTCACTGTTTGCAGACG
ACATGATACTATACATAGAAAATCCTAAAGATTCCACCAGAAAACTATTA
GAACTAATAAATGAATTTAGCAANGTTGCAGGATACAAAATCAATATACA
AAAATCNNTTGCATTCCTATACACTAGCAAAAAAAGATCGGAAAGNGAAA
TTAAGAAAACAATCCCATTNACAATTGCAACAAAAAGAATAAAATACCTA
GGAATAAACCTANCCAAGGAGGTAGAAGACCTGTACTGTTGGGACTTCCC
TGGTGGCGCGGTGGTTAAGAGTCCGCCTGCCGATGCAGGGGACACGGGTT
CGATCCCCGGTCCGGGAAGATCCCACATGCCGCGGAGCAGCTGGGCCCAC
GCGCCACACTACTGAGCCTACACGGGCCCGTGAGCCACGACCGCTGAGCC
TGTGCGCCCGGAGCCCGTGCTCCGCAGCAGGAGAGGCCACAACAGTGAGA
GAGCCCGCGCACNGCAACAAGGAGACGAAAGACCTGTACGCAGAAAACTA
TAAGACACTGCTGAAAGAAATTAAAGANGAGACAAATAAATGGAAAGATA
TTCCGTACTCATGGATTGGAAGANTTAATATCGTTAAGATGTCAATACTA
CCCAAANCAATNTATAGATTCAATGCAACTCCTATCAAAATCCCAACGGC
GTTTNTTACAGNACTAGAACAAANAATTCTAAAATNTATATGGAAGCGCA
AAGGACCCAGGAAAGCCAAGGCANTCCTGAGGAAGAANAACGNAGCTGGA
GGAATCATGCTCCCCGATTTCAAGCTATATTACAAAGCTACAGTAATCAA
AACAGTGTGGTACTGGCATAAAGACAGACANATAGATCAATGNAATAGAA
CAGAAAGCCCAGAAATAAACCCATGTATATACGATCAANTTATCTCGACA
AGGGAGNCAAGAATATACAATGGGGAAAGGACAGCCTCTTCAATAANTGG
TGTTGGGAAAACTGGACAGCCACATGNAAAAGAATGAAATTGGAACACTA
CCTTANACCATACACAAAATTATACTCAAAATGGATTAAAGACCTAAATG
TAAGCCTGAAACTATAAAACTCTTAGAAGAAAACATAGGAGAAAACTTTT
TGACATNAATCCGGCAATAATTTTTTTGATNCGATCCNAGAGCAAAGGCA
ACGAAAACAAAAATAAACNAATGGGACTNTATCAAANTTAAAAGCTTCTG
CGCAGCAAAGGACACTATNAACGAGATGAAAAGGTGACCCACAATGGGAG
AAAATATTTGCAAATCANATATTCGACAACGGATTATATCCAGANTATAT
AAANAACTCCTACAACTCAATAGNAAAAAACAGACAACCCAATAAAAAAT
GGGCAGAGGATCTGAACAGACATTTCTCTAAAAAGACATACAGATGGCCA
ATAAGCACATGAAAAGATGCTCAACATCACTAGTTATCAGGGAAATGCGA
ATCAAAACCACAATGAGATACCACTTCACACCAGTTAGAATGGNTATCAT
NAAAAAGACAAAATAACAAGTGTTGGCGAGAANGTGGAGAAANTGGAACC
CTCGTGCGCTGCTGGCGGGAGCGTAAATTGGTGCAGCCACTNTGGAAAAC
AGTACGGCGGTTCCTGCTAAAAAATTAAANATGAGAATTACCGTATGACC
CAGCAATTCCACTCCTGGGTATATANCCAGAGAACGAAAGCATAACTCAA
AAACTATACATGCACCCCAATGTTCATNGCAGCACTATTTACAATAGCCA
AGACGTGGAAACAACCCAAATGTCCATCAACGAGAACGGATAAANAAAAT
GTGGTACATATATACAATGGAATATTATTCAGCCATGAAAATGAATGAAG
TTCTGACACTTGCAACGACANGNATGAACCTCGAAAACATTATGTTAAGT
GAAATAAGTCAGNCANAGAAAGACAAATATTGTATGATTNTACTTACATG
TGGAACCTAGAAAAATGGTACAGATGAACCGGTTTCAGGGCAGAAAATGA
GACGCGGATATAGAGAACAAACGTATGTACATCAAGCGGGGAAAGCGGCG
GGGGTGGTGGTGGTGGTGNTGGGATGAATCGGGAGATTGGGATTGACATG
TATACACTGATGTGTATAAAATNGATAACTAATAAGAACCCGCNGTATAA
AAAATANTTAAGGGCTTCCCTGGTGGTGCAGTGGTTAAGAGTCCATCTGC
CGATGCAGGGGACACGGGTTCGATCCCTGGTCTGGGAAGATCCCACATGC
CGCAGAGCGGCTGCGCCCGTGCGCCACGGCCACTGAGCCCGCACGCCACA
ACTGCTGAAGCCTGTGCGCCTGGAGCCCGTGCTCTGCAACGGGAGAGGCC
ACAANAGTGAGAGNCCTACGTACCACAAAAAAAAAAAAAAAAAAAAGAAG
AAAAAAGAAAAAAAAATTAAAATTAAATTCAAAAAAACATTAAATTTTTT
TTAAAAAAGTCCATGTATGTAGTCTTTCTTTATGCCCCAATGATTTTCAG
TGGTCTTGTAATTATT
>rnd-4_family-272#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
AATAATAAGAAATATGTATATTTGGTCTTTGTCCCCGGTTCCTGGCACAG
AGCTCCTAAAACCCTTGGAATTTCCCGAGTGATAGGAGCGTCTTTTGTTA
TTCATAACGAGCCCCTTTCAACCACACCTGAGTTTATGCTAATGAGGTGA
CAGA
>rnd-4_family-35#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
GTGTGACAGTCGTTAGTGCTGCTCANCAAATATTTCCAGCTCTCTGCCTT
CTGGGCACATGGTAGGATTGCACTTCCTGGCCCCCTTGTGGTTGAGTGGG
GTCATTCTGGCCAATGAGNCGTGAGCGGAAGTGACGCGTGCCACTTCCGG
GCGGAGCATTTGATTGCCGGTGTGAGACCCTCCANAGCGTNCTTCCCTCT
GCCACAGCGACCGGCAAGTATTCCAGATAGCGGCTGCTCCATCAGCCTGG
GTCGCAATGAAGACTGCGGAGCGGAGCCCCCAGCTGACCCGCAATGGACA
TGTAGCGTGAGCGAGAAATAAACCTTTGTTGTTAAGCCACTGAGANTTTG
GAGTTGTTTGTTACTGCAGCANAACCTAGCCTATCCTGACTGATC
>rnd-4_family-225#Unknown ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
AAAGTTCGCAACTTGAAGGTTCGTACGTAGGGGACTTAC
>rnd-4_family-490#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
TGTGGTAGGCAGAATTCTAAGATGGCCCCCAAGATTCCTGCCCCCTGGTG
TACATACCTTGCATAATTCCCCCCTTGAAGTGTGGGCAGGACCTGTGAAT
ATGATGGATNNTCACTCCCGTGATTAGGTTACGTTATATGGCAAAGGTGA
AGGGTTTTGCAGATGTAATTAAGGTCCCTAATCAGTTGACTTTGAGTTAA
TCAAAAGGGAGATTATCCTGGGTGGGCCTGACCTAATCAGGTGAGCCCTT
TAAAAGAGGGTCTAGAGGTCAGAGAAATGCTCCTCTGGCCTTGAAGAAGC
AANATACACGCTGTGAGNCGGCCTATGTGGCANGGAACTTGAGAGGAGCC
TCTAGGAGCTGAGGGCAGTCCCCGGNTGACATC
>rnd-4_family-152#SINE/MIR ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
ATAAAACTCAATGAAGGTGGACACCATGACTTGGTCACCCCGGGGAGGCA
GCATGGTNNAGTGGGGAGAGCACGNGCAACAGACCCGAGTTCAAATCCTG
CCTCCACCTGAGCTATCTGCATGGCTTCGGCAAATTNCTTAACCTCTCTG
AGCCTCAGTTTCCTCATCTGTAAAATGGGAATGATAATATCTACCTCCCA
GAGCTGTTGTGATGATTGAATGAGATATTCCCAATAAGACTCCTAAGTAC
NTAATAGGCGCCTGGGAAACANCGGNTNNTTCCCCCT
>rnd-4_family-328#SINE/MIR ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
CACCACTTACTAGCTGTGTGACCTTGGGCAAGTTACTTAACCTCTCTGNG
CCTCAGNTTCTTCATCTATAAAATGGGGATAATAGTATTACTACCTCGTA
GGGTTNTTGTGAGGATTAAATGANATTGTATGTATAGTGCTTAGAACAGT
GCCTGGCACACGGNAAGTGCTAATCTGTGTTAGCTCT
>rnd-4_family-385#DNA/hAT-Charlie ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
AAATAAGTTTGGGAAACGCTGGGTAACAGAAAGTTAAACAGATTCTTTAC
TGCAGGACTTCTCAGAGCCTTTAATATGCTAATGTGCATTGTGAATCTCC
AAGAGAGGGATATAGTATGCAGCGTTTCCCAAACTTATCTGACCATGGAA
ACGCTTTTCTACGGACCATCTCNTGGATCAGTGTTCCACGGAACACACTT
TGGGAAATCGCCTTAGAGGAACTTCATNTCTNTCNTC
>rnd-4_family-304#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
TTATGGACTGAATGTTTGTGTCCCCCCAAAATTCATATGTTGAAGCCCTA
ACCCCAATGTGACTGTATTTGGAGATGGGGCCTTTGAGGAGGTAATTAAG
GTTAAATGAGGTCATGAGGGTGGGGCCCTAATCCGATANGACTGGTGTCC
TTATAAGAAAGAGACACGGGAGACGGACAGAGGGAAGAGGCCATGTGAGG
ACACAGCGAGAAGGCGGCCGTCTACGAGCCAGGAAGAGAGGCCTCGGNAG
AAACCGGCCCTGCCGGCACCTTGATCTTGGACTTCCAGCCTCCAGAACCG
TGAGAAAATAAATTTCTGTTGTTTAAGCCACCCAGTCTGTGGTATTTTGT
TATGGCAGCCCGAGCAGACCA
>rnd-4_family-340#DNA/TcMar-Tigger ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GATCCTCATTATTCGCGGATTCCGTATTTGCGAATTCGCCTACTCGCTAA
AATTTATTTGTAACCCCAAAATCAATACTCGCGGCGCTTTCGCGGTCATT
CGCGGACATGCACAGAGCGGCGAAAANTTTGAGTCGCCCGACGCGCACGT
TCCCAGCTGAGGTCGAACAGGCGACGCCTGCCTTCTTGTTTCAGCTCTCA
TACTGTAAACAAGTGTCCTTTTCGCGGTCTATTTAGTGCCACATTGT
>rnd-4_family-251#Unknown ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
CGCCTCCTGGAAGCTGCAGCACGCCTCCGCTTCTGCACGGCAAATCAGGG
CCTTNCTTCCAGGCATGNGTTCNTGCTGGGTGTGCCGGTAGCGACACNGC
GTGNTAAGATGCTGACTTTCTCCTCGAGCAGAGTGACTTCAGGTACGAGG
GCGGGCCTCGCAGTGTTCCAAGCACGGTGTTCTCTCATGGCAGCTCACAC
AAGGCCCGTGACAGAGTCTTCCTGGGCACTTCACACTCAACAGCCAGGTT
GTCCCGAGGGCGTGCGAGGGCTCTGGAAACGNAGCGCTCCTCAAGGAGCG
CGCAGTGCGTTTCCCTGCGCTCGGCACGCACAGAGGGGCTCCGAAGGGCN
ACGGGCCTGGATGTTGCTCAGCCGGCCCGCGGGTGCCTGGGGGTACTCAG
TGNCCCTGNNGGGAAAAGGGTGCACACCCGGGGGGCCTAGGAGTCCCCGA
ANGCGTGCTTCCGTTAAAATAAAGCACAGAGCGACTGAGAACTCATGGAA
ACTGCTGCACGCCTCCCCTTCTGCACGGCTACTCAGGGCCTAAACTGGAG
GCGAGTTCTCACGTCGAGGTTCCCTTTCGCTCTAGAGCCTGTCATGCGGA
CCG
>rnd-4_family-428#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
CTGCCTTCGAGCTGGGACATCGGTTTTTTTTCCTGCCTTCGGACTCGAAC
TGAAACATCGGCTCTTCCTGGGTCTCNAGCCTGCTGGCC
>rnd-4_family-950#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
AAAAAAAAGACAACAGGCCCAAAATGGAGTCACTTGTGCTAAGCCCCACG
TCACCAAACCGAGACTTAATACCTAACCTAATTGCAGTTTCAGCCTCTCC
CAGGAATGGAATCTTAAACCAGTCAGTCNGGAATTNCCTGATCAGCACTA
GTGAGGTAATCTGCCTGACAGACCCCTNCCGTCCCCCAAAGGAAGGTGAC
CTTGCCTGAAACAATCCACTCT
>rnd-4_family-590#DNA/TcMar-Tigger ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GTGACCAGAGGCTCGCAGGAACCTAACCCTGTATTTCCCCTAGGAGCAAT
GGTTCAGTATTCGCTAATTCAGTGTTCGCGGCGACTTTATAGAACATAAC
TACCGCGAATAACGAGAATCGACTG
>rnd-4_family-123#DNA/hAT-Tip100 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
GCTGGAGCCGGCTCGTACCGGCTCGCGAGAGCTGATTGTTAAATTTCAGG
AATTTTGCGAGCCAGTTAAACACAGCCATTGTTAAAAATTAAATTATATA
AACTTACAATTAAATAAATTATATTAAAAACAAAGGTAATAAATACTCAA
AACTCGTCNCTTCCTAATTATTTTACTATTATCTACGTTCTTGAGGTTAT
TTACGTCTATTGTATGTGTGGTGGAAATNCTATGTAATGGCTCCTCTGCA
CATCTCTTCCCAACTCCGCGTTCAGTGACATCACGTTGGTAGCTTGAAAT
CGGCCATGGTGGGAGTATTTACACCATGGAAATCGGCAAACGCTACAAAT
CAGGGCTTTCCCCTGGAGAGCCGGTTGTTAAACATTTACCAGGATA
>rnd-4_family-353#LTR/ERVL ( Recon Family Size = 25, Final Multiple Alignment Size = 20 )
AGGGNCCAGGGGACANTCCTCTCACCGCGGCTNTGAGAANTANATTTGTG
AGGGCCACCCCCCTANCCCNACTCCCCACATCCTTGAGAANNCTCTGGTG
GTTGNTCCTTTCTGCAGGCCAGANGTNANAGTGGCAGATACTNCCGTGGC
CGAACTGGNNNCCCTGGATNCNGTGGGAGTGATNGGANCNCGGGGTTGGC
CAGGGNCCAGCGGTGGTGGGAGCATGTGACCACCGAGGCAAAGCGGGCGT
GGTNACCGTGANGGANGGCGGAGCCANAGCAGCAATCANAGNGATCAGTC
GAATAGTCTGACCGACANAGNCCNNNGGCACTGGCTAATTAATCGCATGG
CGTCCCTAACGTGAGATAGACAGGNAGCCCACTAAGTTCTTACTTGATNT
GTATGANCGGAAANACTCTAGGTCAGNGAACANANGTCTGACTTGAATNC
CAANAATAGAGACAGCCCTCAGCCAATTTCCAGANTTGAGCCAGTTCGCA
GACCCAGAGCCCCTTGAATGAAGGGGAGGTCGAGTCCCCTCGAGGAAGGA
CCCTGCNATACCGNCAAAAGTGTATACCGTAACTCTTCCCCAGCCTTCCC
CAAAGGGANCTNCGGCCATTTACCAGGTAACTGTACTTNGGGANAGGGAA
ATACCCAGACCTTTTGGGGACTATTAGATACTGGCTCTGAACTGACACTA
ATNCCTGGAGACCAAAATGCCACCGTGGCCCACCAATCAGAGCTTAACGG
GTGTCAGGCTTAACTCGGGTTCATCCTCAAGTGGGCCCAGTGATNCCCTA
GACCCATCCTGTGGTTATTTTCCCAGTTCCTGAATGTATAATCGGAATAG
ACATACTTAGTAACTGGCGGAATCCCCACATTGGTTCCCTGACCCGTGGA
GTGAGGGCTATTATGGTAGGAAAGGCCAAGTGGAAGCCNCTGGAACTTCT
CTCCCTNCCAAGATAGTAAATCAAAAGCAATACCGCATTCCTGGAGGAAT
TGCAGAGATTAGTGCCACCATCNAGGACTCGAAAGATGGTGATTTCTACC
ACATCCCCGTTCAACTCGCCTATTTGGTCTTGGAGAATGACAGTGGATTA
CCGTAAACTTAACCANGTGGTGACTCCGATTGCAGCTGCTGTNCCAGATG
TAGTTTCATTGCTNGAGCAAATCAACACANCCCCTGGCACCTGGTATGCA
GCTATTGATCTGGCAAACGCGTTCTCTCTAACTTGTCAGTAAGGAGNATC
AGAAGCAGTTTGCTTTCACCTGGCGAGGNCAGCAATACACTTCACTGTCC
TACTTCAGGGCTNTGTCAACTCTCCAGTCCCTGTTATCATGTAGTCNTCA
GGNACCTTGATCGAATTTCCCTTCCACAAGATATCATACTCATTACTTAG
CGGTCGACATCATGCTGATTGGACTTGGTTGGTAAGAAGTAGCAAGAAGT
GGTCAGAGGTAGGAAGTACATCCGACAAAAANTCACGGATGCAGTGGTGT
GGGGCNTGTTGAAATATCCCTCCAGCGTAAAGGAAACAGNTTGCCTCTGG
CCCCTCCTACAACCGAAAAGAGACACAATGCCTAGTGG
>rnd-4_family-327#DNA/TcMar-Tigger ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TAAAAATGATGTCGTTTTCCAAAGATAGGTCCACAATCTCTCTGCAATTC
CGAAATCCAAAAAGCTCTGAAAAACCAAAATTTTTTTCATAAGTTTGGTT
CAAAACTTATTTGGCGGCAAAACCTGACCTGAACTGACATGAGGCTATTT
ATAGTCTTTATTTACCCACTTGGTGTGAATATTCGTACGTTTTGCTGCAG
AAATATTAATGTGTTTGACTACGGTGCTGCCCCAGATCCCTGCTGGGAGT
NATATAATATATGGTATNTGCACCATACCCTAAAATCCGAAAATTCTGAA
TTCTGAAATACATCTGGCCCCAAGATTTTCAGATAAGGGATTGTGGA
>rnd-4_family-818#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
AAAACANGCAAAACTAAACAATATATTGTTTAGGGATACATATGTGGCAA
AAATAAAAAAACGCAAGGGAATGATNAACACAAAATTCAGGATAGTAGTT
ACCTCTGTGGGGAGGAGGAGGAAGTGATTAGGGAGGGGCTCTAAGATACT
GGTAATGTTCTATTTCTTAAGCTGGGTGGTGGGTACANGATGTTCATTTT
ATTATTCTTTATTGTATATA
>rnd-4_family-68#LTR/ERVL ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
CATGCCTTTTCATTCTGATGCTTTGACATCTGGGGCCTTGCTGACCCTGG
AGGGACTGCCCCTCCCAGGGCTAGCCAATTCCTAGAGANAGCAAAGCCCC
CTCCGGCGCGCCTTTCATATGCAAACCAACCANTCCAGAGCCCACACTCC
CCCACCCCCCCTGCTATCACCCCAGGGCCAGGTACCAGACAACTAGGGAC
AGCCCCTATGCCCAGAGCCCGCCGAAATTATTCAAACTAGCCAATCCTAA
ACCTGCTTACCCTGCCTCGCCCATTCCTCCCACGGAAACCACAATAAAGG
CTCTGCCCACGTTTCCCCTCGCTCCCTCTGCCTCCTGACCGACCCGGTGC
TTCCCCGCGTGGCCCTGCATGGCGTGGCTGCCCCTCCTCTNGGGANCTGT
GAGTAACAAACTATCTTTCCTATGGCAGTCTCCTCCTGACCTGTTGGCCT
CACACATACCTGAATAATAATAAAACCTACATTTTAAAAC
>rnd-4_family-280#LTR/ERVL-MaLR ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
CTACATTTCCCAGCCNCCCTTGCATCCAGGCGTGGCCATGTGACTGGNTT
CTCCCAATAGAATGCGAATGGAAGTGATGCGCGNCATTTCCAGGCCTGGC
ACCTTAAAAAGCANGTGTGTCTCCTCCACTCTCTCTCTCCCGTNCACCGG
CTAANCGCAGAGGACTNTGAGATCANAGGGATGGCGGAGCCACAAGGTGG
AAGCAGCCTGGATCCCTGAGTCACCNCGTGGAGGAGAGCCTAACGAGACA
CGNACTGCCACGGACTGTGACGTGAGCAAATAANACATGTTTATTGTGTT
AAGCCACTGAGATTTGGGGGTTGGTTTGTTATAGCAGCTAACGTTAANTN
AACTANCACACTACCNTACTTC
>rnd-4_family-125#DNA/hAT-Charlie ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
GGCTCAGCTGCCAACTAAAAAACAAGGGATGTGCCAGATCAGAGACCTTA
AACTGGCAACCTATGGGATGGCAGTGCATTTAACTGGCATTTTAAAAAAA
TGAATTTATTGGCTGCTAAGTTATAAACACCAGGAGATTTCACATAAAAA
TCTGGATTTCCGGCTTCTCTTGAAAAAATCGGAAGATCTGGCAGCACTGG
GCCCGCATTCCCGCACGGCAACAGTCGGCTGGAGCTGAGNGGGGCTGCCC
CTTTAGACGGGCCACGCGCTCTCCAGTTTGCCACAGTCCCCACCACTCCC
TATCGTCCTCCATACCCCCGGCCTACTTCGTCGTTNNCGTTACCTGCCTG
GCCCCTGNAGGCATCCGA
>rnd-4_family-111#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
TGGGGCCTGGTCGCCAGAAAGACCAGCCCCGTGATTAGAGGGTAGGAACT
TTCAGCCCCGCCCCNTCCATCTGGGGAGGGGCCGAAGCTGAGTTCAATCA
CCAATGGCCAATGACTTAATTAATCATGCCTNCGTGATNGANTCTCCATA
AAANCCCTAAACAACGGAATTCGGAGAGCTTCCGGGTTGGTGAACACATG
GAGGTGCTGGGAGGGTGGCGCGCCCGGAGAGGGCATGGAAGCTCCGTGCC
CCCCCCCANACCTCGCCCTGTGCATCTCTTCCATCTGGCTGTTCCTGAGT
TNTATCCTTTATAATAAACTGGTAAACGGTAAGCGCTTTCCCGAGTTCTG
TGAGCCGTTCTAGTAAATTACCGAACCTGAGAAGGGGGTTGTGGGAACCC
CTGATCTGCAGCCGGTAGTCAACCAAGTACGGGTGCCGGCGACCTGGACT
TGCGGCTGGCGTCTGAAGCGGGGTCAGTCTTGTGGGACTGAGCCCTTAAC
CCGTGGGGTCTGNGCTAACTCCGGGCAGGGAGCGTCAGAACTGAATTAAA
TTGCGGGACACTCAGTTGCCGTCCACTGAGAATTGGAGAATTGCTTGGTG
TGGAAAAACCCACACATTTGGTGTCAGAAGTGTTGTGAGTAGAAAAACAG
TGTTTTCTTT
>rnd-4_family-764#DNA/TcMar-Mariner ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
TCAGTCTTGTTATTTTATAGTCACACCCTATTTCTGACCCAAAACGGTAT
TACCCAGCTTGATCACCCGCCTTATTCACCANACTTGGCTCCGAATGGCT
TTTGNCTGTTTCCAAAAATCAAATCCACCCTCAAAGGACGAAGATTTGCC
ACCACTGAGGANATTCAAAATAGTATGACGAAGGTTCTAAAGACAATTCC
AAAAATGCTTTGAGCAATGGCAGCATTGTTGGAATAATGTATAGCTTCCC
AAGTGACTNCTTTGAAGGAGACAACACTCATTTGGATGTATAAGTTCTGG
TATGTTT
>rnd-4_family-133#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
TACAATGNGTTGAACTATATCAAANAACTAAAACTGTGAATCAATAATGA
TTTAAAAAAAAAAGACTGCATTGGTCACATTGGAGGTTGNTAGGGCACCA
ACTAATTCTCTGAAAACTGATAAAAACGAAATAAGTATCCCGCCTTTCCT
GCATAAACTATCTTTCAGGGNAACCAANCAGTTGACGANCGAAGGTTCTT
NTTTTNTAGAATNNTTACAGCTAANAAACGCAGAGAGAAANCACTGNTGA
AATTAGAGNACCNCCATTCTGCAACTCNTANTGAAATANNGANCCAGATG
GCAATATTCATCAGTGGNTGCCAAGNCCNCTGGGTGCGAGGCTGATGGGG
GACTTCTTACAAATGGATGGATCAGGCTGACAACACCTGAACCCACTGAT
NAATCTTAACATCACGAAAGGGAAAACCAGAGATGCGCCCCTCCTGATGC
GACGCAATAGGAAGNACGCAACACCACCTATGAAATATTCTTACCAAAAA
ATCTGAATCTAATCNAGCCTCTAGATCTAATTACCAGTTTACAGGAAACA
AGGTAGAGGAAAAGCACAACAGGATGAAANCAGCAAATCCAGAATGTGGG
AAATTCTACAGGACAAATGACCCAGTTTCTTCAACAAATAAATTGCAAAG
GGAAAAAAGAAGGAGG
>rnd-4_family-851#LTR/ERVL ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
CCCCAGCTGCTGAGTGTTGGCTGCTAACGGCTCACAGCTGCTCCCTTCTC
CAGAGAGTTGCCCTCGGCGGGAGCCACCTCCCGCCGGCCCGACACACACC
CTCCCCCACCTGCAGCCAGAGNCAAACCGGCGTAGGAAAAGGCNGCCCCT
TGCCTCAAGGTGGGGCGACTCTGCGGTGCAGTTCGTGCTCCAGAGCTCCC
CGTGGGATCAGGCTGAGCCGAGCTCCAGCCCGGACCACATCCTCGCTTAG
CTCCTTCCCCTGCCCCGTCCTGCTTCCTCACTTCCCTTCTCCTGAGAGCA
CTCCCTCAATAAATCACGTGCATAAGACCCCTGTCTCAGGCTCTGCTTCN
AGGGAACCCGACCTAA
>rnd-4_family-146#DNA/hAT-Tip100 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
CAAAGGCAGGTTTACTAAAAAGAACTTAAGCTTCAGGGCCCCTCATTTGC
ACGGGCCCCTTCCAAGGCCCTGNACCTAATTTTGTATTTGTAATTTTGCA
TTCTTTTTCTTAAAGAGGNCCCCCAAATTGTATAAGCTTCAGGGCCCCAC
AAAACCTGGATCCGCCC
>rnd-4_family-81#DNA/TcMar-Tigger ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TAGTCGGCCCTCCGTATCCGCGGGTTCTGCATCCGCGGATTCAACCAACC
GCGGATCGAAAATATTTAAAAAA
>rnd-4_family-540#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AGGAATGTGCGCCGTGATCCACTTGGGCGCCTCTTGGTACTCCCTTGCCC
AATTGTGACCGTGAATGGACAAGTGCAGCAACCCCGACCTGAGAATGTTA
CGGGGCTCAGACCCCTCAGGGATGAGGGTCTGGGTCGCGCCAGATAAACC
ACTGAGACCAGCAGAGGCGGTGGCTGAGGGCGAGGGGAATCTAGAATGGA
TAGTGGAGGAGGAGACGATGAGNATCAGTTGCAGCCCGAGACCAACTGCA
GCGGGGCTGTAGCTCGTCCCACTAACNTCCCTCTNCTAAGTTTCCCCTNA
GAAGAGGTCCANGGAACGCTGTCCCCAACATGTATGGAGAAGTGGATCCG
AGTAGTACAAGGGGTGGACTGTGGCAGCCGTGGAGGTGGCCACCGATCTC
CTCTTCAAGAAAACTTTCTGTTCAGCTGTNAGAATGCAGTGATCTGACAG
CCTCCAGCTGCAGCNCCTTCAGGGTCTGCCATCGGCTNCAGTGAGGCCNT
ACTNTCCCCGGGCAGTCCNCAGCCAGTGACTGAGCACGAGCTGGAATACC
AGGCCCGGCCATTTCCGCTCGTCTAACTGGCNATCTTTCTCCCAGCTCCC
CGTTGGGCCGGCTGAGGCTTTGTCGGATCTGCACCGCGGTCTNAGGCTCT
CCCTGCCCAATCCTGCTTCCTTTCACTTTATCTTCNACAGGTGTTACCNC
CCAGTAAACCTCTTGCACTCCNAACTTCGTCTCAGCATCTGCTTCCCGGA
AGACCCAAACCAACACACC
>rnd-4_family-239#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 16 )
CATGCCCTACAAGAAATACTAAAGGAANTCCTTCAGGCTGAAAGAAAGTG
ACCTCAGACAGCAACTCGAATCCACAAAAAAAATAAAGAGCGCCGGTAAA
GGTAATACATAGGTAAATATAAAACAGTATAAATTCATATTTCTTCTCCT
TTCTTCTCTNAACTGATTTAAAAAGCAATTGCATAAAACAATANNTATAT
AATTGTATTGTTGGCCTATAACATATAGAAATGTAATATATTTGACAATA
ACAGCACAAAGGGAGGTGGGAGCAAAGCTGTATTGGAGTAAGGAAATGAC
ACCAGATGGTAACTCAAATCCACAGGAAACAAATGAAGAGAACCAGAAAT
ATGATAAATAGAGTTAATATAACGAACNCTATAAATATATACTTGCTCTC
CTTTCTTCTCTTAGCTTCTTTAAAANACATAACACTATATAAAGTAATAA
TTATAACAACGTATTGTTGGGTTTGTAACATNTATAGACGTAATATGTAT
AACAATAATAGCACAAAAAGGGGGAAGAGGTAATAGAGNTATACAGA
>rnd-4_family-331#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
CATGCATTCTCAACGGGGGCGATATCGCCCCCAAGGGGGCGAAAATTGGT
TCTTGGAGGGGGAAAAAAATCTTAGCTNTTATAAAGCGCAGGTATACATA
CAGTACATAAACAGATATACAGTATCTGTGGTATTAAAATTTCATGGAGG
GGGAGGGAACGATTAGGGAAAAAATGTCTAAAAAAGNCTCCTTAGGGGGG
CGATAATGAAAAAAAGGTTGAGAAACAC
>rnd-4_family-313#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ATGTCTGGAATNCAGGAGATCCCTCGGGGCGCCTCTTAGTACTNCCATGC
CNTGTGATNAAAGTCAATGGAAAACTATAACAACCCAATNCAGGCAGGAC
CGCTAATGGCCCAGACACCCTTCAGGAATGAAGGTTTGGGTCACCCCACC
AGGTAAGGAACCACGACTAGCTGAGGTGCTTGCTGAGGGCAAAGGGAATA
CGGAATGGGTAGTGGAAGAAGGNATTTATAAATANCAGCTATGGCCACGT
GACCAGTTGCAGAAACGAGGACTATAACAGCTATGAGTATTTCTTCCTTA
TCTCGTTATAAATATGTTTGTGTATGTGTGTATGCATATTTTTATCTGTT
TTCTTCCCTCTCTTNTCNCCTTATCGTNTAACATAGATATATTAATAGTT
AACTTTACGTCNCAGTATTTAAGTTATAGGATATCAGGGAGAAGAGTGAA
CATCACTCAAGGACTTTGCATCCTCTTTTGGGGAAGGGNTTAGCGCGTTT
TCGGTTGTATGNAGGATAGTTGTATCATGTTAGGCGGAAGCATGACTTTG
CTGTTGTCTTTATTTGGAGGTTAAGTATGGTTTAAGGAGGTGTGTATGAG
CGTCANATTGACAAGGGAT
>rnd-5_family-94#SINE/MIR ( Recon Family Size = 189, Final Multiple Alignment Size = 126 )
GGTTTGAATCGTTGACTCCATATATCAGCTGTGTGACCTTGGGCAAGTCA
TTTAAACCTCTCTGNGCCTCAGTTTCCTCATCTGTAAAATGGGAATAATA
GTACCTACCTCATAGAGCTGTTGTGAGGATNAAATATGCTAAGTGAAGTA
CTTAGAACAGCGCCTGGCACATAGTAAGCGCTCAATAAATGTTAGCTATT
ACTATTATTATTTTGTTATTTTTCTCTTTGCCCTCTATCCTGGGATCTCG
TNCCCC
>rnd-5_family-97#LINE/L1 ( Recon Family Size = 133, Final Multiple Alignment Size = 117 )
AGATCTCCAAGATAATTATTAAGTGAAAAAAAAAGCAAGGTGCAGAACAG
TGTGTATAGTATGCTACCNTTTGTGTGAGAGAATAAGGATACATACATTT
ATGTTTGTATATGCATAGANTATCTCTGGAAGGATACACAAGAAACTAGT
AACAGTGGTTGCCTCCGGGAGGGAAACTGGGGAGGGGGAGTAAGGGTGGA
AGACATCTTTTCACTGTATATNCTTTTTGTACCTTTTGAATTTTGNACCA
TGTGAATGTATTACCTATTCAAAAAATTAATTTTTTTAAGTCANNAATAT
TATAAACGCGACCAATCNAAGTGGAAGAATAGAANTGAAAAATGATAAAT
TAAGGACAG
>rnd-5_family-189#DNA/hAT-Charlie ( Recon Family Size = 108, Final Multiple Alignment Size = 105 )
TTCAGTGTTTTTCAAACTGCGGGTCGCGACCCATTAGTGGGTCGTGAAAT
CAATTTAGTGGGTCGCGACCAGCATTTAAAAAAATGAAAAAGTAGAATAG
AAAATATCAGAGTGCATCGCACATACATAGTAAGTAAGTATTGTTTCGTG
AAACTTTTGTTTCAGATTTGTGTATGTATATGTGTGTACTGGGTCGCGAT
GTAAAATGTATTTCTTACTGTGGGTCGCGGTCAAAAAAGTTTGA
>rnd-5_family-278#LTR/ERVL ( Recon Family Size = 114, Final Multiple Alignment Size = 104 )
TGGGAGACAATTCTCCATGGGTCTCTCGCGTTTCTTGCACGTCTTGCGAG
CAGAGGCACTGACTGCCTTTGTTCCGGACTATCTTTTCAAGGATGTTTGT
ATAGCGAACAGCCTTGGAAGATAGAGATAGTGTCTCCCTCCGGAGCAAAG
GGCAGGTTTGCTTACTGTCCAGTATAATAAAAATGTCTCCCTCCAGAGCG
GGTTTGCTTACTGTCCAGTATAATAAAGATAATGTCTCCCTCCGGAGCAA
AGGGCAGGCNTGCTTACNGCCCATTATAAAAGATTTGGGTTCCTAAGCTC
AGGGTTCCTCNNCTGTGACGCAACCCACTGCGTGTGCAGGCGTCACCTGG
CCCTCTTCGCGTCGCCCCGTGGGANTTGGGGCNCGGGGAACCGGCGCAAA
ACCTGATACTGGTACTGCTATTGCCGTGAGTAATAAAGTCCTTTGTCTCT
GACCCAGGAGTCTCGTGTCTTCTGCCAGCATCCATGAAACTGTGGCAGGC
TAACTTGTTAGCTTGCAAGTAGGGTAAAATCTCAGACCCTTCACAGTTT
>rnd-5_family-51#LTR/ERV1 ( Recon Family Size = 97, Final Multiple Alignment Size = 95 )
CCACCAGTTATACAGAGGAAAACCCTATCAGGGCACTTGCTCCAGTGGTA
AACAATTCTGAAGTTGGTCAGAGGTGGGGAATCGTCTCCCATGCAGCCAG
CAGCCCCCCACGCAAGGAGCGTCCTCATTGCAAAGCTGGGGNACCGTGCC
GAGGCATCTGTGAGTAAACGTGAGCTGAGCCCCAGGCCAGCTGCTGCTGA
ACTGTTCCCACCCGTCCCAGGTAAAACACCTGAATATGTACAAGGACTTG
AAAGCCTAGAGGAAGGGCCGTGGAGCCACACGAGCGACAGCACGCCGGCC
GACTTGGTGCCTGCAGGCCAGCCAGGATGGTCCTGGCCCCGGGCGCTCTT
CTGGAAGATTTCCATTTCCCTGCCTGAGATACCCCTCCTGTCCCGGCCCC
CACTGCTTTTTTCCTTCCTCACCTCTGCCCGGGGAGAAATTCCAGCGGCA
GGTATGGGTGACACATCCTCTTCTTTAGCAGGTGGCAGCCTGGCAACTGC
TGCAGAAAGTCCAGCAGAGCCCCACTCACACCGGGCCACCCACAAAGCCG
TGGCCCCTCACTCCCTCCCACCAGCCCAGCCCCGANACTGCTGACGGGGC
AGAGAANATGGCGTCAGGCACGGCTGCAGGGGCTCTTGCTGCCTGGAGCG
GTGTTTATATTGATCTCAACCCAGGCACACCTGGGGAGGGCTGGCCGGCA
CGGTCAGGCTGCCCAGGTCAGCCAATCATCACCCCTCAGGGGCTCACAGT
TGCAGAAAATGGACCTTGCTGAACCGGCCAGGTCCAAGGAACAGGTGTGG
GCTCCTGAGAGTCAGGATAGACAAGGGGCTGCAGCTCTGGCTTGTTTTCT
AATCATTTTATCTGGCCCATGAGTGGGAGACAACTTCAAGAAGACCCTCT
CCTAATGAGAGGAACCCAGGAGTCAGGGAGAGGAGGGGTGGTGGGTGGAG
ACAGAGGCCTGGTGCCCCGGCTGCAGTGGAAGTCTCTGGAAGACCAGGTG
GAGGGAGGCCGCACGGAGTGATGCCCAGGGTCACAGACCTGTCGGAGCTG
CTGTTTGTTAGTTCAAGTCCTGCTCTGAGGTGCTCTGTGTCAGCTCTGAG
CGACAGGTGAGCTGGGGGTGCTCTGCAATGAGGGCTATGTGCACGGTTCC
TGTGTGCCCAGCCCTGCCAGGGTACCTGCAAGGGNAGCTCTGTATCCTGG
GAGGGGCCTGACCACGAGAGCCCCGTGGGCTGCCGGTGACCTGCCCAGGT
GAGCTCCGTATCCTGGGAGNGGCNTGACCACGAGAGCCCCGTNGGCTGCG
AGGGGGGGGACCTGNNNAGGTGAGCTCCATATCCTGGGANNGGCCTGACC
ACGAGAGCCCCGTGGGCTGCTGGGGACCTGGTAAAGGACGTCAGGACAGT
CAGTGAAGCCACCGAGGATATACATCCAGTAGTTCCTAATTCCTACACCC
TGCTGGTCATTCTACCATCCACCAGGACATGGTATTCTGTATTAGACTTC
AATGATGCCTTCTTCTGTATTCCATTAGTCCCAGAGTCACAAGAAATTTT
GGCTTGTGAGTGGCAGGACTCAACATACAACNAAAACAATACTNCCGGGC
CGTCCNGCCCCAAGGGTTCAAAAATTCCCACACCATCTTTGGGGAAACGT
TAGCTAAAGACCTAAAAGTTCTACCTCTGGAAAAGGAAACCCTCCTTCAA
TATGCAGACGACATTCTGATCGCCAGCCCTACTAAGGAGGCCTCTGAACT
ACCAAGCCAATAAAGGATAGAAGTTGTCCAAGAAAAAGCTCAAATATCAC
AGACTGCGGTGACCTGCCTGGGCTTCATTCTCACAGAAGGTCGGAGAAGC
CCATCCCAGGAAAGGGAAGAAACCATTTTCAGCCTTACCCCTTCTAAAAC
TAGAAGACAGCTTAGGGGTTCCTGGGGAGGCCGGGGTTTGCTGCNTCTGG
ATCCCTAACTACAGTCTACTAGCTGGGCCTCTATATGAAACACTGAAAGG
AAAAGATGATGATCCTTTCGAATAGAATCCAGAAGCGGCCTTTCAAGAAT
GGAAAGAGCAGTCAATTCAGACCCTTGCCCTGGAACTCCCTAATTTAGCT
AAACCCTTTGACCTTTACATTCCCGGTGAAAGGTGAATCGCCATTGGAGA
ATTAGTGCAAAAACTGGGACCACTTGAAATGGAACAACGCAAGAATGCCC
TCCAGGTAGGATAAACTACGGTCACCAAGGGCTTGGCCCACCGCCACATC
CGGCCAAGATACTGGCGGTATCTAAAAACCTGGAAATCAGCAGCCCAAAA
GGCCACCTCCCTCCTAAGGGAAAAGGACCCCACGTGGTGATCCTAACCAC
CAACCATGCCCTGAAGTTGCAGGGTTCGCTCCGTGGGCACGCCGACCTCG
AGTGAGGAGGCCCTCCAACTCCAACATCCAGAGAGATAACCGGGGGCAAC
GGGNCNCCATGACGACTCGTGTGANCATCACTTGACCTGGAGTTTCTCTC
AGAAAACAACAAGAGTGTGCCCCAAAAGAGTAGACTACTGCTTGCAGGAC
TTACTGCACCCAGAGGGGAGCTAATAATCTTGGCGGGGGAACCGTATATC
ACGCTGTCACCATAGAAAAGCCTACAGACACCGCGGTGACGGTGGCCAAT
AAGACCGGCTGGACTCCTGTCTACTTCAAAAGGCCGTTGACTCAGTGGCC
ATCATGGTCCTTGATCACCACCGACCCTGGACTGTCTGGGAGTTGAGCGG
GCAGGGCTCTGACACCTGGTGCTGTTTGTACGTTAATTCAGGGGCCTAAT
TGAAGAAAGCGCAGACTACTGGTCAGAGCATCTAGGCTGGCAGAAACNGT
CAGCCTAAGGTGGCCGAACAAATGTGGGGCGGGGTGAAACCGGCCCCCAC
AGCGTCTCTGCGCATCTCTTTCCTGGACCCTTAAAGGTCATTAGAATCTA
TAACACTTCCAATGCTGGCGCTCAGGCGGACGAGCAGTGAGGCAGGAGGC
CTGGGGACAATCAACCTCACCCGGAGGCTGCTGGGGAGAAGTTCTGCCCC
TCCCCCCCGGGTATGAGGACTCCCAACTCAGCACGAAGCAGTTACAGAAG
AGGGGTCTGCACCCTCAGCGCCCCAAGAATGAGGAACGGGACAAAAGGCA
GAGGAGGGGTTTGTCGCCGGCAAAGCCCATNAAAAATTCCCGGGAGATAA
AAATAGAATCTGGGCAATAAAATAAAGTCTAACCTTTTTTTCCTCTGTGC
TTTGTCTAGCTTCACGTGCTCCTAGGGTTCCGCGCGCAGAGGTCCCACAC
CCGGCACTTCAGACCCGATTTCCTAGTGCGGAATGGCTGGGCCGACACCT
CAGCTCCCGGGGCCCCGTGCAGACTCCGCGACATAGAGCCTGAGCTGCAG
CCAACCCGCCCCTCGAGAGCTCCGCCCCTCCCTCCCGCTGACTCTGACGG
GATCTCTACACAGCAGCCCAGCCCACAGCCCGCGGGGTAGTGCATGCTCT
CACCTCTCCGTTCTCTGATCAAAATATAAAGTTTCCTTTGCTTGTGAACC
AAACTCAGTCTCGATCTGTTGGCCCCAATGACACTGGGCAGGGGGACACT
TGTTGGGGTCCACTCTGGAGGATCAGTAACAGAAATTGAGACTATTGTAA
CCTCAATGAACAGATGTGTGAGCCAAACTGTAGTTAACATAGAGCAGTGT
ATAAGGCTCGGGTAAAATAAGATGTTTCTAACACTTCCATTTGATATTTC
CATCACTTTATATG
>rnd-5_family-465#DNA/TcMar-Tc2 ( Recon Family Size = 95, Final Multiple Alignment Size = 92 )
GTATTTCATCGATTCTAAGATGCACATTTTTTCACATTTTAACATCTCTG
AAATCGGGATGCATCTTACAATCGATGGCATGTCATAGTTTAATTGGCAG
CGTCTTTTCTTTCTTAGTGGTACATAAAATAATGGTGCATCTTACAATCG
ATGGCGTCTTAGATTCA
>rnd-5_family-16#SINE/MIR ( Recon Family Size = 108, Final Multiple Alignment Size = 85 )
GAGCATCAGGTCAAGAGCTCAGACTGTGAGCTGGACGCCCTGAGCTAAAA
TCCCAGCTCTGCCACTAACTAGCTGTGTGACCTTGGACAAGCTACTTAAC
CTCTCTGGGCCTCAGTTTCCTCATCTGTAAAAAGGGAAAAACAACAGTAC
CTATCTCTACGGGCTCTTATGAAGTTTCAGTTAATGAACTGAAATNTGTC
AAGTGCTTAGCACAGTGCTGGCACGTAGTGAGATCTATATAAGTGTT
>rnd-5_family-52#LTR/ERV1 ( Recon Family Size = 81, Final Multiple Alignment Size = 71 )
ATAAATTGTGAAAGACTTTGAAATGGGCAAAAAAGANTACTGGGTGTCCT
GTCTAGCGCACTCTTCCGGGTTATCTCTACCTTTCATTGTCTTTGAGCTA
TTTTACAACTCTGTAAGTTGTAGANAACTGATAGCAATGCAAATGATTCT
TGTCCATAGANATGCAAATGATTTCTGTCCGGTGGAGATGCAATTGATTA
TTGCCCTATCGATATAAACCAGTTTTGCATCTATTTGCAAATTCATTTCA
GCATTCCTGATTGCCTAAACATGTATGTTTCTCGAATTCTCCTTTGAACC
GGTTNTAACATCTTNCTGGTTCCCTCATTAATGAGTTAAATAAAATCTTT
GACACGTGTTCATTTTATATTTGTATGAGAGTCATGATTTTACCTTTTTG
AAAAATTATCTTTTAAC
>rnd-5_family-407#DNA/hAT-Charlie ( Recon Family Size = 70, Final Multiple Alignment Size = 67 )
GATGGCAAATAGGTTTCATCTCGCGTGCCAACTCTGATCGATTGGTAGTG
GCTGCCTGGAGCGCTGTGTTGAGAAGGATTCTGAGGCCGCGTCCGGGCTC
AGCGGGAAAGAGTGCCGCGATCGATTAGCGATGTCTGCCGTGGGCANGGA
AGAGGGTGACAGCAGTGATGCCNTATGTTTCCATCC
>rnd-5_family-3#LINE/L1 ( Recon Family Size = 78, Final Multiple Alignment Size = 65 )
CCACATGCCGCGGAGCGGCTGGGCCCGTGAGCCACGGCCGCTGAGCCTGC
GCGTCCGGAGCCCGTGCTCCGCAACGGGAGAGGCCACAACAGTGAGAGGC
CCGCGCACCGAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAGGAAGGGAAA
AGCAACAATTAACATACAAGGGAATCCCCATAAAGNTAACAGCTGCCTTT
CAGCAAAAACNCNGNAAGCCAAAAGGGAGTNGTACGGCATNTCTACAAAT
CGATTAGAAAGGGANAAACNTACAACCAAGATTACTCTACCCAGCAAGGA
TCTCATTCAGATTTGCAAGGGAAATTAAAACCTTTACAGACAAGCAAAAG
CTAAGAGAATTCAGCACCACCAAACCAGCTCTGCAACAAATGCTAAAGGA
ACTTCTCTAGGCAGGAAACACAAGAGAAGGAAAAGACCTACAANANCAAA
CCCNAAACAATTAAGAAAACGGTAANAGGAANATACATATNAATAATTAC
CTTGAATGTAAATGGATTAAATGCTCCAACCAAAAGACATAGANCGGCTG
ACGGANACAAAAACAAGACCCAATATATGTTGTNTACAAGAGACCTACTT
CGGACGTAGGGACACATAAAGACTGAAAATGAAGGGATGGTANAANATAT
TCCACGCAAATGGAAATCGAAAGAAAGCTGGAGTAGCAATTCTCATATCA
AGNCAAAATANAACTTAAAATAAAGACTATTACAAGAGACAAAGAAGGAC
ACTACATAACGATCAAGGGATCAATCCAAGAAGAAGATACAACAATNGTA
AATATTTATNCACCCGACATAGGAGCACCTCNATACATAAGGCAAATGCT
AACAGCCATGAAANGGGAAATCGANAGTAACACAATNATANTAGGGGACN
TTAACACCCCGCTTTCANCAATGGACAGATCANCCAGAACGAAAATAAAT
AAGGAAACACAAGCTTTAAATGATACACTAAACAAGATGGACTTAATTGG
TATTTATAGGACATTCCATNCNAAANCANCAGANTACACTTTCTTCCCAA
GTGCTCATGGAACATTCTCCAGGATAGATCATATNTTGGGTCACAGNTCA
CCTTGAGTCACCTTGGTAAATTTAAGAAAATTGAANTCGTATCANGTACC
TTTCCCGACCACAACGCTATGAGACTNGGTATCGATTANAGGAAAAAANC
TGTAAAAAATACAAACACATGGAAGCTAAAAAATACACTACTTAATAACC
AANAGATCANTGAAGAAATCAAAAGGGAAATCAAAAAATACCTAGAAACG
AATGACAATGAAAACACGACGACCCAAAACCTATGGGATGCAGCGAAAGC
AGTTCTAAGAGGGAAGTTTATAGCAATACAATCCTACCACAAGAAACATC
TCAAAGAAACAACCTAACCTTACACCTAAAGCAATTAGAGAAGGAAGAAC
AAAAAAAACCCAAGTTAGCAGAAGGAAAGAAATCATAAAGATCGGAAATG
AATGAAAAAGAAATGAAGGAAACGATAGCAAAGATGAATAAAACTAAAAN
CTGGTTCTTTGAGAAGATAAACAAAATTGATAAACCATTAGCCAGACTCA
TCAAGAAAAAAAGGGAGAAGACTCAAATCAATAGAATTAGAAATGAAAAA
GAGAAGTAACAACTGACACTGCAGAAATACAAAGGATCATGAGAGATTAC
TACAAGCAACTNTATGCCAATAAAATGGACAACNTGGAAGAAATGGACAA
ATTCTTAGAAAAGCACAANCTTCCGAGACTGACCAGGAAGAAATAGAAAA
TATAAACAGANCAATCACAAGCACTGAAATTCAAACTGTGATTAAAAATC
TTCCAACAAACAAAAGCCCAGGACCAGATGGCTTCACAGGTGAATTCTAT
CAAACATTTAGAGAAGAGNTAACACCTATCCTTCTCAAACTCTTCCAAAA
TATAGAAAGGGAGGAACACTCCCAAACTCATTCTACGAGGCCACCATCAC
CCTGATACCAAAACCAGACAAAGATGTCACAAAGAAAGAAAACTACAGGC
CAATATCACTNATGAACATAGATGCAAAAATCCTCAACAAAATACTAGCA
AACAGAATCCAACAGCACATTAAAAGGATTATATACCATGACCAAGTGGG
ATTTATCCCAGGAATGCAAGGATTCCTCAATATACGNAAATCAATCAATG
TGATACACCACATTAACAAATTGAAGGAGAAAAACCATATGATCATCTCG
ATAGATGCAGAAAAAGCTTTCGACAAAATTCAACACCCATTCATGATAAA
AACCCTCCGGAAANTAGGNATAGAGGAAACTTACCTCAACGTGATAAAGG
CCATNTACGAAAAACCCACAGCCAACGTCATTCTCAATGGTGAAAAACTG
GAAGCATTTCCACTAAGATCAGGAACAAGACAAGGNTGCCCACTCTCACC
GCTNCTATTCAACACNGTNTTGGAAGTCCTAGCCANAGCAATNAGAGAAG
AAAAAGAAATAAAAGGCATCCGAATCGGAAAAGAAGAAGTAAAACTGTCA
CTATTCGCAGATGACATGATACTGTACATAGAAAATCCTAAAGATGCTAC
CAGATAACTATTAGAGCTAATCAATGAATTCGGTAAAGTAGCAGGATACA
AANTCAATGCACAGAAATCTNTTGCGTTCCTATACACTAGCGATGAAAAA
TCTGAAAGAGAAATTAAGGAAACANTNCCATTTACCATNGCATCAAAAAG
AATAAAATACCTAGGAATAAACCTANCTAAGGAGGCAAAAGACCTGTATG
CNGAAAACTATAAGACACTGATGAAAGAAATTAAAGACGATACAAACAGA
TGGAGAGATATACCATGTTCTTGGATNGGAAGANTCAACATCGTNAAAAT
GNCTATACTACCCAAAGCAATCTNCGGATTCAATGCAATCCCTATCAAAN
TACCAATGGCATTTTTCACAGAACTAGAACAAAAAATTTCAAAATTTGTA
CGGAAACACAAAAGACCCCGAATAGCCAAAGCAATCTTGAGAAAGAAAAA
CGGTGGTGGAGGAGTCAGGCTCCTGACTTCAGACTATACTACAAAGCTAC
AGTAATCAAGACAGTGTGGTACTGGCGCAGGAACAGANATATGGATCGNT
GGAACAGAATAGAAAGCCCAGAGATAAACCCACGCACATATGGTCACCTT
ATCTTTGATAAAGGAGGCAAGAATATACAATGGAAAAAAAGACAGCCTCT
TCAATAAGTGGTGCTGGGAANACTGGACAGCTACATGGAAAAGAATGAAA
TTAGAACACTCCCTAACACCATACACAAAAATAAACTCAAAATGGATTAA
AGACCTAAATGTAAGGCCAGACACTATCAAACTCTTAGAGGAAAACATAG
GCAGAACACTNTATGACATAAATCACAGCAAGATCCTTTTTGACCCACCT
CCTAGGGAAATGGAAATAAAAACAAAAATAAACAAATGGGACCTAATGAA
ACTTAAAAGCTTTTGCACAGCAAAGGAAACCATAAACAAGACGAAAAGAC
AACCCTCAGAATGGGAGAAAATATTTGCAAATGAAGCAACTGACAAAGGA
TTAATCTCCAAAATATACAAGCAGCTCATGCAGCTCAATATCAAAAAACA
AACAACCCAATCCAAAAATGGGCAGAAGACCTAAATAGACATTTCTCCAA
AGAAGATATACAGATTGCCGACAAACACATGAAAGGATGCTCAACATCAC
TAATCATTAGAGAAATGCAAATCAGCACTACAATGAGGTATCACCTCNCA
CCGGTCAGAANGGCCATCATCAAAAAATCTACAAACAATAAATGCTGGAG
AGGGTGTGGAGAAAAGGGAACCCTCTTGCACTGTTGGTGGGAATGTAAAT
TGATACAGCCACTATGGAGAACAGTATGGAGGTTCCTTAAAAAACTAAAA
ATAGAACTACCATACGACCCAGCAATCCCACTACTGGGCATATACCCTGA
GAAAACCATAATTCAAAAAGAGNCATGTACCACAATGTTCATTGCAGCNC
TATTTACAATAGCCAGGACATGGAAGCAACCTAAGTGTCCATCGACAGAT
GAATGGATAAAGAAGATGTGGCACATATATACAATGGAATATTACTCAGC
CATAAAAAGAAACGAAATTGAGTTATTTGTAGTGAGGTGGATGGACCTAG
AGNCTGTCATACAGAGTGAAGTAAGTCAGAAAGAGAAAAACAAATACCGT
ATGCTAACACATATATATGGAATCTAAAAAAAAAAATGGTNCTGANGAAC
CTAGGGGCAGGACAGGAATAAAGACGCAGACGTAGAGAACGGACTTGAGG
ACACGGGGAGGGGGAAGGGTAAGCTGGGACGAAGTGAGAGAGTGGCATGG
ACATATATACACTACCAAATGTAAAATAGATAGCTAGTGGGAAGCAGCCG
CATAGCACAGGGAGATCAGCTCGGTGCTTTGTGACCACCTAGAGGGGTGG
GATAGGGAGGGTGGGAGGGAGACGCAAGAGGGAGGAGATATGGGGATATA
TGTATACGTATAGCTGATTCACTTTGTTATAAAGCAGAAACTAACACANC
ATTGTAAAGCAATTATACTCCAATAAAGATGTTTAAAAAAAAAAAGA
>rnd-5_family-627#LINE/L1 ( Recon Family Size = 77, Final Multiple Alignment Size = 65 )
TATANACCAAAATGTTAACAGTGGTTATCTCTGGGTGGTGGGATTACGAG
TGATTTTTATTTTCTTCTTGATTCTTTTCCGNATTTTCTACAATGAACAT
GTATTACTTTTTATAAGATCAAAATGAA
>rnd-5_family-184#LINE/L1 ( Recon Family Size = 65, Final Multiple Alignment Size = 63 )
TTTTCCGCTTCCGGTATGGCGGAGTAGCTCCTATCGGACTAACTCTCCCG
CAGATAACAATTATAAACTCTGGACAAAATATAAAAACAACTACCTGAAG
GCACTGGAGAGCGACCAAAAGCAGGCAGANNCTGGAGGGGAGTCGACACT
TGGAAGAAGGGAACGGCACTGGGTGAGTTTCNCGTTTTTACGGCTTTTNC
CCTGAGGGCAGTCCCCAGTCTGCACCAGATGGGGAGGCTAGAACTCCGAT
AGAAAACCTGCAGTCTTACTGGCTGAAGAATCAGAGGACAGAGTTCGGGG
CAACCACAGCNGCTGGAAAGTGAGGAGGAAATCCCGGAAAGGAGAGAGCC
GGAAAGAGAGAGCCCCAAATTCTGTGTATAAACTCCGCCCAAATCTCTGG
CTGACCCCTGAACCACATGCGTGCGGCAGACTCAAGCAGCCCAGTGAAGC
TTAAAAGAACTGAACTGAGATTTGAGCTGCTGCCCACCGCAGGAGAGAGT
TTGCAGTTTGAGTCCAGCCAAGTTAANTGCCTGCTAAAACAAAAAATCAA
CACTCTTCGGAGGAATATAACAGAATCCAGTCTCTACAACA
>rnd-5_family-168#LINE/L1 ( Recon Family Size = 60, Final Multiple Alignment Size = 59 )
CCATGCAGCAGGCCTAGAGAGCAACCAGTCCAGACTGGAGCAGGAGGACA
GAGGGCTCCGGGAGGNATCTCCGAGAAGAAAATGGAACTGATAGATTACT
TGATATGTTTGACAGTATTGAGAAGAATTTGTAGNTCTGTGGAAGAGTTT
GGAAATAATTAGCGATAGTTACATAGAAAACTAAGCAAACAAAGAAAAGG
CAATTATTAACTCAGGGAAAAAAATGTACAAGAAAGGAAANGTAATCATA
GTATACTACATGGCTCAGCTGTGAATAATATTTACATAGTCATAATAATG
TAAACACTGAATATTGATTTAACCAAAAATTATGATATAACTATATTGGG
AGGATGGGGAGAGGGACAGTACGGGTGGGGTGTAAGAGAGCTAAATCCTC
ATCTTCCATAACAGGAAGTCAATAGATAATGTCTAAAATTGANAAATCAA
GAAATAGCAGTATAAGCATGTTATTTAGAAATATGGAGGTAAATACCAGA
AGAAACAGCTAAGAGTTGAAAGTGGTTGCCTCTGGGGAGCGGATGGGCAT
AGGGAGGAGTGGACCAGTGCTATTTTTCATTATAAGCCTTGTAGNACTAT
TTGACTTTTTAAAACTATGTACATGTATTACTTTGATAAAAAA
>rnd-5_family-75#LINE/L1 ( Recon Family Size = 70, Final Multiple Alignment Size = 58 )
CAAAGGAATGAAGAGCACCGGAAATGGTAAATATGGGTAAAATATAAAAT
ACTTTTCTTNAAAAATCTCTTTAAAAGANNAAAAATAATAACAATGTATT
GTGGGGTTTATAACATATGTAGAAGTAAATGTATGACAACAATAGCACAA
AGGACGGGAGAGGAAAAATGGAAGTATACTGTTGTAAGGTTCTTACACTA
TACGTGAAGTGGTATAATATTATTTGAAGTAGACTGTGATAAGTTAAAGA
TGCATACTGTAAACCCTAGAGCAACCACTAAAATAAAACAAAACAAAAAG
CCAAAGAG
>rnd-5_family-1207#LINE/L1 ( Recon Family Size = 59, Final Multiple Alignment Size = 56 )
GGCAAGGTGAGGGGGGTGGGGTGGGGGGGNTTCGTACGTAAAGGGGCAGC
ACGAGGGAGTTCTGTAGTGATGGAACNGTTCTGTATCTTGACTGTGGTGG
TGGNTACACGAACCTACACATGTGATAAAATTGCATAGAACTAAATACAC
ACACACGCACACACACAAATGAGTGCATGTAAAACTGGNGAAATCTGAAT
AAGGTCNGTGGATTGTACCCA
>rnd-5_family-745#LTR/ERVL ( Recon Family Size = 61, Final Multiple Alignment Size = 56 )
ACTGCTGCTGCCCCACCCGTATCCTTGGCGCCCTACCACTTCAGTGCGCG
CTGGCCAACTTCCAACTGCCAGCACCTGCANCTCTTTGCCTGAGGGCTTT
CTCTGGAGACTGAGGGGGCTGGGGCAGAAGTGCGGGAATTAACGTCCCCC
GGAGCAGCCCTCAACCAATGACTGACGGGAGTTGGTGTATAAATACCCCA
GCTCCCTCGCCCCTCGGGTGGGATAACTCTGAGGCGTGTGTTCTACACCG
TCTCCCAGAGNTCCCCAGCGGGATTAAGCTCCAGTTGCCCACAGTGGTAG
CTGGCTTGATAACACAC
>rnd-5_family-777#DNA/hAT-Tip100 ( Recon Family Size = 62, Final Multiple Alignment Size = 55 )
TTCAATTTCCTCTACTCCAAGTGCTCNCACTTGACAAGGGCCGCCGCGTA
CGGTTGTGCAGGTTGTGCACTGCACAAGGGCGCCTGGCCAAGGGGGCGAG
TGGGGGCTGAAATCCAGCCCGCGCTCCGCTCGCCAAGCCAGCACCCTGGC
GTGGGGCTGCGTCTGCCCGGAGGAAGGGGCACCTTTTTTCTAATTCGCAC
AAAGGCACCGTATGGGCTAGTGGCA
>rnd-5_family-1556#LTR/ERV1 ( Recon Family Size = 60, Final Multiple Alignment Size = 55 )
CAAGACGGCCTTAACGTTCCCCTCAGCTTGACTAAACTTTAGACAGGCTT
CTTCCTGACTCTAGGCCCCTGACCTCCCTTTTCTTAGAGCATTTACTTTA
GAAAACTTGTAATTGTAAATTCTTTCTCTGCCCCTTTGAGATGTAAATCT
TCTCCNAGCCTCTTGCCAGTTTTACAACCCAGGAATGTCTTTCTCAAGGA
CCCTGGGAGCCATCCCTTTGAAATGTAATCATCAAGGAAGATAGNGCCCC
TATCTCCCAGTCTCTGTGGGAGGGTAGGAGCCTAACTTCGGTAAGCGCCA
ATTAGCAAACACAGATGGCCTAATCACATTGACCAACCTCCCCCCTAACG
TCCTCCAGTACTTTTCCACTAGCTCACCCCAGCGCTTAAAAACCCTCCCG
CCTTTTGTTTCAGCGGAGTTGAGTTCAGTCTCTCTCCCCTATTGCAATAG
TCTTGAATAAAGTCTTCCTTGCCTGTTTAACTCTGTCCGGTGCAATTTTT
CTTTGAC
>rnd-5_family-1262#LTR/ERVL ( Recon Family Size = 60, Final Multiple Alignment Size = 55 )
CAGCCCTGCTCTAGGCACCATGAGGANCACGGTCGATGAGAAATCATGGG
CCTCGCACTGTGCCAGTTATTAAGCTACCGTCTCTCAGCTCCAAACCCAC
CCTTCTATGCTCTGCTTTGTGATGCTGGGGCTGGGACTCTGCAAACCGCA
TTTCTGCTTTGCCAGCTGGCTCCCTGTTAGGCTCTGCCAATAGGGGCGCT
AGAGGGAGACTGNAAGGCTGGAGGAGAAGGGACTTCTTCCGCTGTTTCCC
GTGGCTTCCTGCTTACTCTGTTCCTGTCAGCATCGCCCCAGCAGCGCCTC
TTCACCCCGGCAGCGGCGGTTCCTTCCNGTAGCAGCAGCTGANTCCAGTT
TGCAGTTTTCCCAACACTCGCAGAACCAGCCTCATCGCGCCCCCTCAGAG
GCACCAGCACCAGCCGGCAGGCGCCCCCTCCTCAGAGGTCTGGGTCCAGC
CCCACCGNGTCTCAGCTCGGAGACACCAGCACCAGCCGAGCAGCGCCTCC
CCTCAGAGGTCTGAGTCTCAGCTCCGGGGCCCTCCTCCAAGCTTCTAAGT
TCTAATAATTCCAACCCTTCCCTTTGTTCCCCCAGCCCTAGGGGTGGTAG
CTGCTTCCTGCAGTTGCTACCTCCGCGNTACCTCAGTGTCCTCTTTACTC
TTTCAGTTACCCGTTAACAACTTTATACCTAGTTAAATTTTCTTATATTA
AATTCTCTCTGTTAAAATAACTGGTGTGGTTTCTGTCTCCTGACTGGACC
CTGACCAAACGCCGTACT
>rnd-5_family-457#LINE/L1 ( Recon Family Size = 59, Final Multiple Alignment Size = 53 )
AGGTGACTGACAGCAAAATNTAAAAGTTGTAGTAATTNATGTTATGTTTT
AGTATGGAATGTCATAGNTCAGAACCCAGCTGCAAAAGANCNGGTCATAG
TNANAAAGCATGCGTAATGTTATTACAATTGANAATAGTAGAAAAATTAG
AGTATTTAAAAAACAAGTAGAGGACTTCCGCTTCCGGGAAGATGGAGTAG
ATACTTTTCCCTATTCCTCCCGCTAAGTACAACTAAAAACCCTGGACGTT
ATATATAAAACAAACATAAGAAGACTCTGAAAGGTGGAGAGAAGAAGGCA
GACCGGCTAGGGACCTCGGGACCCGAGGAACGACACGGTGGTGAGTTCCC
TGGGTTTTCTTTTTGCCTCATATATCCCAGACTTGGAGCTGAAGAAGCCG
GCAACCCGGAAACGCCAACGGGCGCAGACAAAAAAGCCCCAACAAAAGCC
TGCTCTCTCTAGCCAAAGGACCAGGAAAGGGGCAGCCTAGCAAGACAAAA
ACTTTTAGACAATAACCGCTCCTACTCCAGCCAAACACCACAGAAAAAAC
TGTGGCCCCACCCCCACCCACGCCAGCAAAGGCCGAGTGGGGAGCCTAGA
CTTCCACCCTCGCCAGGCTGTAACGAGGTCCCCCATCCCCCCTGCTAGGT
GGTGTCAGAGGCCAAGTGGGGAGCCGGGACTTTCATCCCCGCCGGGCGGT
AACGAGGCCCCCACCCCCGCGGTGTCAGTGGAGACACGTGGGGAGCCTGG
ACTTCCATCCCACCCGGCAGTAAGAGGCGCTCCTTCCCACTTCCCTTTCC
GCTGGGGTGGTGTCAGAGGAGGCCTAGTGGAGAGTCAGGACTTTCACCAC
CGCGCAGCAATGACACCCTCTCCCCGTGGTGTCAGTGGAGGCCACGTGGG
GAGCAGTAACGAGGCACTCCTNCCCCTCCCAGCCAGGGNGGTATCAGTGG
AGGCCTAGTGGGGAGCCAGAACTCCCACCCCTGCTNAGGG
>rnd-5_family-239#LINE/L1 ( Recon Family Size = 63, Final Multiple Alignment Size = 52 )
AGAAAAATCAAAGATGGCACACTTGAANACATGCATTTANTTCCGCTCCC
TCCCGAAACCCCACTAGATGACAGTAAAGGAATTTTTTTAAAGGCATAAA
TCCACAAGGACAAGGAGAAGAAACAACAAAATTTTGGAAGCTGGAAAGCA
TAGATGANTTAGAAAGACCTAGAAAGCTGAAACCTAACAGCGGAGNAAGC
AGAGAAGCAACCCGATTTACNCCGAGAACCTCAGAAAGGCTCAAATTGGC
AGCACCAGGTACCTCTGAAGGTGAGGCGGAAAATAGGAGGATTGGTTGAA
AGTCTGTTTAAGAGACATCCAGATCCCCTCCCCCACTGCAGCCAGGCGAC
TGCCCCTCTCCTGGCAGAAGACTGGAGGCTTATTCTCTGGAGAAGGTGAA
NCGGAGGGNCTCTGAATTGGGGACGGGGCTGGGGGAAGATACTGAAAAGA
GGGATTAAGTGAANATCTGCACATCGAATGGTGAGACTCCCTAGCCTCCT
TCCCACACTCGGCTCCCAGAACGCTGGCAGCCAGGCCTCTAGGCAGGAGA
CTGGAGGATCCTTTCTGGGGTAACAGGAATAGAAAAGACTANAGATACTG
ACATTTGGGGTTCCCCAACGAAACGGCCCGCCAGATCACCCTACAGTGAA
GCCCACAGTCGACAAGCCCCACCCACGCACAGAGCTTCCAATCAGCTTTT
CAGTGCCTCACTCTTAAATATGAACAGACAGCCAAGGATCACCAGACATT
TGAGGAAAGCCTCTGNGAAAGAGAGACCAAATACAAAAACCAAAGACAGA
AAAGGAACTCGGAGGAAACAGACGATGCAGCAAGAAGAAAACTTCAAAAA
AANTACTAATATTTTCAGGAAAGAGAAGATATTGCATCCATGAAACAAGA
ACAGGATGCTATAAAAAGAGCTCTTGGAAATTAAAAATATGATAGCAAAA
ATAAAAACTCAGTAGAAGGANTGGAAGATAA
>rnd-5_family-649#LINE/L1 ( Recon Family Size = 65, Final Multiple Alignment Size = 52 )
TCCAGTAATGGTGGATTAGGTAATTCAGACCAACCTCCTGCCGAGGACAA
CTAGAAAAGACAGAAAAAACAATGTTTTCAAAGGAAATCTGAAGGCATCG
GAGAGCTAACAAGGCAGCGAGGANTTGAGGGCAAGACGGAGAAAAGAGAA
GCAGAGAGGTGAGCCCGACATTCGGGTGCCGCTTTTCCTCTTGAGCGTNT
GCAGATAAGAAAGTGGCGGCTGAGAAGCTGAGCAGAGCTTCCGGCGGTCT
CACGAGGGGCAAAAGCTGGAGTTCAGGCCTGCCAAGGAGGAGAGGCCTCG
GAAACACCCAGCTTTCGGCTGGGATCCCCGAAACCCTAGGAGTAAGGGCG
AACCGGAAGTAGACCAGCCCTCACAAAGACTGAAGCCCAGCTTCGAATCA
TCTCAATCCCTGATTGGATTAAGGTGATCTGATTCCACCTGACCTGCCTG
CCAGAAGAAATAAATCCTCTCTGGAGGAAGATAACATCATCCAGAGCCTC
AAATTATTTCTACAATTTTTATATACAATGTCCGGCACNCAATCAAAAAT
TACCCAGAANANCAAATGANCGANAACCAAGAGAAAATCAGACAATAGGA
AANAGACCCACAGGAGATCCAGATATTGGAGTTATCAGACACGGACTTTA
AAATAACTATGNTTAATATGTTCAAGAAAATAAAAGGCAAGATTGAAAAT

>rnd-5_family-252#LINE/L1 ( Recon Family Size = 52, Final Multiple Alignment Size = 50 )
GACCCCAGGACCCAGCCCCACCCACCAGCGGGCAGNCGCTAGCCCCGGGA
CCCCCTGGGCCCTGGCNTCGCCCACCAGCGAGCCGCTCTAGCCCCGGGAC
CCAGCCCCACCCACCAGCGGGCCGGCACCAGCCCCGGGACGCGCTGGCCC
CGGCCCCACCCACCAGGGGGCNGACACCAGCCCCGGGACACCNCGGGCCC
CGCAGCCTGCCGCCCGGGACCCGGCCCNACCCACCAGCGGGCCGGCACCA
GCCCCGGGACACCCAGCTGGCCAGGACCCGGCCCCGCCCACCAGTGGGCC
GGCACCAGCTCCGGGACCCCCAGGGCCCCGCAGCCAGAGACCCTAGGACC
CGGCTCCGCCCACCAGCGGGCCGGCACCAGCCCCAGGACCCCCTGGGCCC
TGGCCCACCCACCAGCGGGCCGACACCAGCTCCGGGACCCCCNGGCCCCG
CAGCCAGGACCCTAGGACCCGGCTCTGCCCACCAGTGGGCNGGCACCAGC
CCCAGGACCCGGCCCCACCCACCAGCGGGCCGGCACCAGCCCCGGGACCA
CCTGGGCCCCGGCCCCGCCCACCAGCAGGCCAACACCAGCTTCGGGACAC
CCCGGACCCCNCAGCCAGCCGCGCCGGGACCCGGCCCCGCCCACCAGCGG
GCCGACACCAGCTCCGGGACACCCCGGGCCCCGCAGCCAGCCGCGCCGGG
ANCCGGCCCCGCCCGCCAGCGGGCCGACACCAGCTCCGGGACCCCGGCCC
CACAGCCANCCACCCCGGGACCCGGCTCCGCCCACCAGTGGGCCGGCACT
AGCCCCGGGACCCCCGGGGCTCCGCAGCCAGCCGCCTCATGACCCGGCCC
CGCCCACCAGCGGCCGGCAGCCTCCGCACAAGGCAGGGCCTGGCAGCCAA
CCGGACCGGGGGCCAGCCACGCCTACCAGACCGCCCACAGTAGTCAGCCC
ACC
>rnd-5_family-659#LTR/ERV1 ( Recon Family Size = 53, Final Multiple Alignment Size = 50 )
ACAGGAGAAGCTCTGAAAACCGAGTAGAAGTTACCCTTTTGTAAGAGACA
TTTACATTTATAAGGGAAATCTCCATTTGTAAGGGTGTCTCCCTCTTGTA
CCAGGAAGAGGAGGATGACTAAATCTCTAGAAACTCTTATCAATGGAGAA
GGCANTGACTTAAATCTGCATAACAACCTTACCCTTGTTTACTGTGCTTT
TCCTGGTAACCTCCCATAACTGGCTCCCCCNCCCCCAACATCTTCTTTTG
TCTTTAGCTGAAGATGGTATTTAAGGTGGTGGCTTGGGCCATTTCGGGGA
GTTACTCAGTTTTCCTGGGTATCTCCCATGTATACAGGAGGTATACATGT
TATTAAACTTCTGTTTGTTTTTCTCCTGTTAATCTGTCTTATTACGGCCA
AGAACCTAGAAGGGTAGAGGGAAAATTATTTTTCCTCCCCT
>rnd-5_family-2977#LTR/ERVL ( Recon Family Size = 49, Final Multiple Alignment Size = 49 )
AGGAAAGAGTTAACATAGCAAGGCCTGAGACTGCTATCCTTAAAAGCCTG
CTTGCAAGGTTGGCCCTTGGCTGGCATCTGGGAACTTGGATTTCGGGAGG
GTTCCCACCATTCCCTGATAAGAGTCACTGTGCCTAAACTGTGCAAACAA
TGTGGTTTATGCTGAACACCTGCTTTCCTTCTGGGAGTCTGGAATTTTGG
TACGTGCTAGGCAGAGGGTGCCTACGTGACCAGCCCCCAATAAAAACCCT
GGGCACTGAGTCTCTAACGAGCTTCCCTGGTAGACAACACTTCACACGTG
TTGTCACAACTCGTTGCTGGAGGAATTAAGCGCGTCCTGTGTGACTCCAC
TGGGAGAGGACTCTNGGAAGCTTGCGCCTGGTTTCCTCCGGACTTCGCCC
CATGCGCCTTTTCCCTTTGCTGATTTTGCTTTGTATCCTTTCGCTGTAAT
AAATCTTAGCCGTGAGTACGACTATATGCTGAGTCCTGTGAGTCCTCCTA
GCGAATCACCGAACCTGGGGGTGGT
>rnd-5_family-299#Unknown ( Recon Family Size = 60, Final Multiple Alignment Size = 49 )
GCGGTGCCCTAGTCGGAGCTGCNCTCAGAGTAACCCTCGNCTTCGCGTTC
CATCCAGGACCTCCTGACCGAAGTCACCGTGCCTCCCAGAGGACGGCGGC
TTGGGTTCTTACTGCANTTTAAGTCCTGTTCCTTCTGTGGCACTGCAGGC
AGCCCCAGGCCCAGAGGAGCAGCTCCGGCGTTCCTCGGTTGAGACAGTTC
GCCGGATGCGGGACTCCCTACTTCGATAAGTTGATTCAGGGAAGGAAACG
CAGGGTAACCGGTGTCTCTTNGGACTCGTTAGAAACCACAGGGATGTACG
CTGAGTGTGCCCATGGAAACGGGGGCCTGCTGGAACTAGCCCTGCTTTCC
CATTTTGAGGGCTGCATTCATGCCTGCCTTGAAGCTACCTGACATTCCCG
GCTCCCGACAGGCCAGTGAGCCCTGGAAGAATGCTTC
>rnd-5_family-1428#LINE/L1 ( Recon Family Size = 52, Final Multiple Alignment Size = 47 )
TGCCCTGGGGAGTGAGCGGTTCGAGCCACATATTGGGCGCCCCAGCCCTG
GGGTCCGACACNGGGAAGACGAGCCCCCTTGGCTGGTTGGAGGACCAGTG
GGACTAACAGGAGGGCTGTGAGAAGCCTAGACTCCGCTCGTGAGGAGCGC
GCGCGCTGCTTGCTCCCGAAGCAGGGCGGAGAGGGCAGATTGAAACTGCC
CGGGNCNCTGGCCGGTTTCCCGCGACCGCCCCGGCGCGCGCCCCAGCCCG
AGCCGAGCGANCGCTCCGGCCCCGCTCGCTCCACGNCGCAGCTCCGCACT
GGGGCGAGGGCTGCCACGGCCGGGGAGAGNGCTCGGCCGTGGGACGCAGA
GGCGGCCCGGACCCGGNGCNGCGTCTGAGCGGGGCGGNGGCGGCCATTGC
CGGCGCTTACGCAGGCAGCGCATCAGAAGCAGCGGCCCATCTCTGACTGG
GGCCGGACCGCCACAGCCTGCGCCCCGACACACGCCAAGTGCCCCGCCTG
CCCTGCGGCGCAGCTCCNCACTAGGGCAGGGGTGCCAGTGGCTGAGGGGA
GTGNTCGGCTGTGAGGGACGAAGGAGGCTCGGACCCGAAGCNGCATCTGA
GCAGGGCGGGGGCAGCCATTGCTGGCGCTTGCACAGGCGGCGCATCGGAA
GCAGCCCGCGTCTCATCACAGGCCGAGAGCCCGCACAGGCCCCTCTTGCT
CCAGCACTGCTCCCCTCTGGGGCGAGGGTGCCGGTGCTGGGAGAGGGAGA
GCACACACTTAAAGGGAACGGAGCCAGCTCGGACCCGACCCTCAGGGCTT
CTGCTCCAGCAACTTGGGACCCGACCCCGCCCCCGATAGGGCGGTGACGG
CCACTGAGCAGAGGGGAAGCCCCGNCTCACACCTGGCTCNGGCTCTAGCC
CCTCCATCTCCAGCCCCACCTCCTACCAAGGTGATAGCTGCCAGCACACC
CTGAGGAAAGACGTGACTCGCGTTCACGTCAAATCCAGCTCTCCCACCAA
AGNCACTGGGCACAC
>rnd-5_family-268#LTR/ERVL ( Recon Family Size = 49, Final Multiple Alignment Size = 45 )
CAGCATCCGTTCCACCTTCATTTCAGCGTGCCTTCCTGTNCTGCAGAGGC
TGGAAAGCTAAAAACTACGTTTCCCAGACTCCCTTGCAGCTAGGGTTCTG
GATACGAATTAGGTTCCACCAATNAGACGCACCTGCGTGAGATTTGGAAG
GCGGAAGTGAGGCGGAGGCTCTCTGTCCCTTTGGCTGTTTCTGCTAGCAA
GCGCGGTCGTGNAGACGTTGAGTTTTTCTGCAGCAGCGTTCCGGTGTCCG
GTCACCAGCCTCGTGGGTGTCGAGAGGCAGTTGCGGCGATNGCGGTCTGA
NCTGGCATGTTCCTGGAGTCAGCAGCTNTGGCGGCGGCTCCTGATTCCCC
GCCTTTCTGACTGAGGCAGAGGCAGCAGCTCCCCTGGTGGGCCAGTTCTG
NGGTGTTTTCGGGTCCTCTGGAGGCCCAGCCTAGAGCCTGCCTCTCAGCC
CTTCCAATGATTCTGTAAGCACCTAATTCCCTGTATNAACATCTTTCTGC
TTAAAATAGCTAGAGTGGNTTCTGTTNTCTGCAACTGAACCCTGACTGAA
ACAAGGAAGATGAGGAAGAAAANAAAGAG
>rnd-5_family-128#LTR/ERVL ( Recon Family Size = 47, Final Multiple Alignment Size = 44 )
TCAGAGGTAGTTGGTACCTGGAAGTCTTATATTTCTGGGTGGCTAGTTTC
CTGCNCCCGCTCGCCCCCTGTGACAGTCATTTGCCTGTTTGCTCTCAGAT
CCATTCCCTGCCCTTCCCCTGCTCTCTGTCCCCAAGCTCCCTTGCCANCT
GGCTTCTGCATGGGTTCGGCCAATGGGAGGCACTGGCGGGAGACTGAGGG
ATAGGGAGAAGGGAGAAGCCAGGGTATTTCTCCCCCTCTCTCCTTNCTTC
CGGTGTCATCTAGAGCAGCCTGCGTCTCCTCCGTGGCTCCAGCTCCCGCC
GGGCAGNCTCGCCGTGGTTCCAGCTCTCTCCGGGCGACCCTGGCTCCGGG
CTCTGGTAGCACCACCTCCTCCCTTTGTCCCTCCAGCCCTAGGGGTGGTA
GCGGCTTCCTGCTGTTGCTAATCTCTGGGTTGCCTCACCGTCCCTTGTTT
GGCTTCTCAGCTCTTCCATCACCTGTGTAACCAATCCCCTGCATTAAATT
CCCTCTGTTTGAAATACCTAGAGTGGTTTCTGTTTTCCTGGTGGACCCTG
ACTGATAAACTTACTCACTCAAAATTAA
>rnd-5_family-1698#LINE/L1 ( Recon Family Size = 61, Final Multiple Alignment Size = 44 )
AAGGGAGATGGTGGAAGTGGCAGCANAGCTTTTGAATCTCCCCGAATTCT
CCCATANAAACAGACAGAGCAACTAGATAGCAAAACNAAAAACCCATTGG
ACAACATTTACAACAAAACTAGGTGACAAGGTATCCCCACAACCCCAAAA
TACAAGCGGATGGGAACAAACCACCAACAGCCACAAGACTCAGTGGCATC
AGCGTCTGTGCGGGAGGAAGCAGAGGGAAGCAACGGTATACCAGACGGAC
CTGAGAACAGGAGAACCCCNAAACAGCCAANAGGTATTCACTGGAAAGCA
GAGCGGGCCAATTTGAGAACAGCAGCTGAAACTGGAAGGGGTTTTGCCCG
NTCCAATAGCAGGTAGGTAAGGTCCGTAGAAGATTTAGCAGTCTGGCCCT
ATGAACTCTTAAAACCGACCAGCCAGGGCTCCCTTCCAGGACAGGGCCCC
ACACTGAGGAGAAACTNCTGGGAGCGGAATCAAAACTGAGCAGGACAGGG
GCAANAGAGAAAAAGAAAAGGTCCAGACAAAAGTGGGGGAGGGGAACAGA
AGCCAGGAAATCTCAGAAAGCAAGCTGCCATNTTTTNAACACTACGCGAA
ANCAACAGAAGAGGAGATCGNGAAGCTAGAAAACCAAGCTGCCTCCTAAA
AGTTCAGGAAAAGAAAACTTCACAAAAATGAGCAACAGAAAAGGACCGAG
GTCAAATCCCATACAAAGTTANTATAAGGAAAAAGAGAATAAGGAGCAGA
ATAACATCCCTACAGACAATGAAAGCACGCCAGAAAACAGATCAAAACAA
GCCTATTTCAAAACGAGCTAAAAGACATTAAGAAAATGATATAAGNCATG
AAAGAACAACATAAATCAGAATTAGAAAAACTCAGAAATGAGGCGACAGA
ACTCAGGAAAGAATTAGAAATAAAAGAAAAATCATTTAGAAATGAAGACT
GAACTAGAAGGAACACAAGAGCAAATAAACACAACAGATAATGCCTTAAG
AGAAATAGAAGGTGAAAAAAGGAAAATTTTAAAAATTAAAAAGAAANAAG
AGATNAAAAGGATTCGAGAGAAAGTGACAAATATTGGAAGACAGGCAAAA
AGATCCAACGTACGGATAATAGGAGTCCCTGAAGAGAAAACCAAAGCAAG
GGAACAGAACAAATACTAAAAACTATAATTCAAGAAAACTTTCCTGAAAT
AAAAAAGGTTTGAAACTACATATTGAAAGAGCATACCCGAGAATATCAAC
CCAGAACGACCAACACCAAGACATATTCTAGTAAAATTACTGGACTTTAA
AGAAAAAATCCTTTGGGCATCTAGGCAAAAANAAAAACAAGTGACTTATA
AGGGAAAGAAAATCAGATTATCATCAGACT
>rnd-5_family-1087#LINE/L1 ( Recon Family Size = 48, Final Multiple Alignment Size = 44 )
GAGATGACTTCCGGCATGANAGCGTGAGGAGCTCCGCGGACCCGCTCCCC
AGTGAAACTGGTGAAAATTATAAAAAAAACAACCATTTAAAGTCTCTGGA
AATNGTCCTAAGGGCATACAGCAAATGAAGAAATATTTATTCAAGAAAAT
CTACTAAANCTCGGTAAGAACAGTGAGAGTCTGTGGTATTTGAGCCACGA
CCTACTCCCTCCCTCCCCTCCCCTCCAGCTCAGCGTGACGGAAGCTCCAT
CCGGGCGAGTGCGGCCAAGAACACGGGGCTCCTTTTCCCCCAGCTCCCAG
TCNAGGGCTACGGTNTCTCCCCGGGAGGGGCAGGCCGCCAGCATTTCTCA
TCAGAAGCTCTATTCTAGGCAAGAACAGCCACTCGTAGGGCGGAAGCTCT
ACCCCAGGCGCGGCAGGCCGAGAATACTGGGGCCCAGTCACCCTCGCCCC
AGCTCGCTCGTAGGGCGGAGGTTCCACGCCAGGAGAGGCAAGCCGAGAAG
ACCAGAGGCTACCGCCCCCGCCCAGCACCCTGCTCGTAAAGCGGGGGTGT
CACTCCGAGAGAAGGGGCCACTGTCCCACCCCAGCTCCGGAGCCCAGATT
GAGAGGCAGGCCGTAAGAACAGAGCTCCGAAGCTCTCCCAAGGGAACTGA
CTTTATTTGGAACAGAGTGTGGGGAAGTTCAAGCCTAAGGGCGCTCTCAA
AACAGTGGAGATTTTGGTGGTAAGCAATTAAGAGGAGGCTGGTAGCTCCA
TAAGAGCAACAAGCTAAACCGTAGGCCAGCTAGAGTTTACAGAGAGAACC
AGGGAAAGAGACAGCTAAGAAGAGCCCTCCTGGGGTCGGAACAAACCTCA
AANACTGGCCTCAAAAACTACCCCTGCAAAGGGGCCCGAATTTAATTGGA
TCAGACTGTGGAGCAATTTATGCCCCAGGGCATTGTCAAAAACAATAGAG
CAATCAGCCAGCAATTAGTGGAGNCTAACAGCTGGGTGTGATACCAACAG
AGGCAGCAGCTTAACAGAGCTCAGGGAAAAAGAGTCAAAGAGAGCCCTGC
TAAAACCACTGTCATCCCAGGGTGACTGCGCATGCCCAAGGCTGCGCCCT
CTGAGGAGTAACGTCAGAGGCTGCA
>rnd-5_family-173#DNA/hAT-Charlie ( Recon Family Size = 46, Final Multiple Alignment Size = 43 )
AGTGCTACTCAAAGTGTGGTCCGTGGACCGGTGCCGGTCTGCGAACTGTT
TGTTACCGGTCCGCGAGAGATAAGTACAGAATGAGAGTAAGCGTTTAGAA
ACTTTTATAGCAATTTGACAGAGTAATTTTATGTCTGTTGAATCTAATNT
AAAAAATNGGGCTTATTTTGTATGTCTTTCAAATTTCATTTTCTAGTAAT
TCATTTTTATTGTATTTTACAAAAGTATCGGTCCGCGACGGATTGGAAAT
GAAAACAACAAAACACAAGAAAACTGGTCCTTCACCACAGATAGTTTGAG
AAGCACTG
>rnd-5_family-307#LTR/ERVL-MaLR ( Recon Family Size = 57, Final Multiple Alignment Size = 42 )
TTTTGATACCTGGAAGTGGGGTGCTGCCGTAACAAATACCTAAAAATGTG
GNAGTGGCTTTGGAACTGGGCAGTGGGCAGAGGNTGGAAGAATTTGAGGA
GCATGNTAGAAAAAGCCTAGATTGCCTTGAANAGACTGTTGTTAGTAGAA
ATATGGATGTTAAAGGCTNTGCTGGTGAGGGCTCAGAAGGAAAGAGGAGC
ATNGTAGAGAAAGCCTAAATATCTTAGAGAATACCTAAATCATCATGAAC
AGACTGTTAGTAGAAATATGGACGTTAAAGGCGCTGCTGGTGAGGGCTCA
GAAGGAAATGAGGAACATGTTATTGGAAACTGGAGGAAAGGGGATCCTTG
TTACATAGTGGCAGAAAGTTTAGCNGAATTGTNNCCTGCAGTTACGTGGA
AAGCAGAACNTGTAAGTGATGAACTTGGNTATTTAGCTGAGGAGATTTCC
AAGCAAAGTGTTGAAGGTGCNGCCTGGTTTCTTCTTGCTGCTTATAGTAA
AATGTGAGAGGAGAGAGATAAACTGAGGAAAGAACTGTTAAACAAAAAGG
AACCAGGACTTGATGATTTNGAAAATTCTCAGCCTATCCAGATNGCAAAA
GATGCTAAAATTNAGAAAGATGCTCTAGAGAAAAAGCCAAGGGTGTGACT
GTANAACCTTTTGTTAAGACCTCAGAAAGATCAAAAGGTCAGAGTATTCA
GTCANACAAAAGGCTCTCTNAAGAGATTAAGGGTGTGNCTCAAGATCCCC
TCAGCCATCTCAGCAGAAGCCAAAAATAGAGAAGGGATTATCTCGGAAAG
ATCTGTGGGTGTGGCTTGTCTAATGGAGTGAACATCCGTGATACATNCAT
GAGACCCACAAAGTTCTTGAGAATNTTATATCAGCAGAAACACCGCCAGC
TTGGACTGAAAGGGACAGAGAGAGTATAAATGAAAGAAGGCTGTCGGACC
CCCAAAATTCTACAGGCAGGAAGCAGGCTGAGAAAACTACTCAGCTGCAA
ATACATGCAGCTACCTTTCATGAAAAAGGAAGGATGACTCAGAGGGTAGA
ACCAAGAGCCCAGAGGGTAGAGCCGAGGCCCAGAGGGCAGAGCCGAGAGC
CACAGAGAATTATTCCCAGGCCTTGAAACCTAATGGAGTTAGCATGGATT
TCAGAATTGCTNTGGACCGGTGACTCCTTTNTCCTTCATNTTTTCTCCCT
TTTTGAATGGGAATGTCTATAGCTGTTATCCTATGCCTGTCCCACCATTG
TATGTTGGGAGCANATACAAAAAAAAAAAAAAAAGACACAGGTCCGCAGA
TGGAGAGGAATTNTGCCTCAGGATGGATCATACCCAGAGTCTCATCCGCA
CCTGGTTTAGATGATGAGATTCGGGACTTCTGAGCTGATGAATTGAGATT
TTGGACTGAGCTGCTGTAGGAGTTGAGACTTTTGGGGNCGTTGGGATGGG
GTGAATGTATTTTGCATGTGGGANGGACGTGAATCTTTGGGGGCCAGAGG
GCA
>rnd-5_family-647#LTR/ERV1 ( Recon Family Size = 48, Final Multiple Alignment Size = 42 )
GAAATAAAATTCATATTTTATGGCAAGACAAGAAAAATTTAAACATAAAA
TTTTCTCTGCCCTTTGGCCTCCTCTCTCCCTTTANTGTGCANTGTGCATC
TGCATTACGCATTAACCAGACCTCCTCAANGGCGGGAATACCTGCTCAAC
CATAAAGAGCAACNTTCTCCTGGCGCCAGCAAGGCAACTCCTTAAAGATA
ACATTCCTTCTTAATCTTGTAAGGGGTCACATGATGCTTTTAGATCTGGA
TTGTGTAAACTGTCAATAATACGTCATTTGATGTACAGCCCTTTGTCTCA
AAAAAACTTATATAACTGTGCCTTGACTTCTAACGGGCGGAACAGTTCTC
AGAGCTTTCTGAGANNCTGTCTCCCGGGTTATAATCCTCAAGTTTGGCTC
GAATAAAATTTTCCATTTCTTTCTTAGATTGACTGGTTAATTTTTCA
>rnd-5_family-96#LINE/L1 ( Recon Family Size = 55, Final Multiple Alignment Size = 41 )
ATTTTGTGTAAGAAAGAAGGGANAATAAGAATATACATATNTGCTTATAT
TTTGCAAAAAGAAACACTGGAAGGATAAACCAGAAACTAATGAAAATGGT
TACCTATAGAGGAAGGGGAAACGGGTNGGGAGGGCGTGAGACTTCTCTGA
ATACCTTTTATATAGTTTTGACTTTTGAACCATGTAAATGTTTTACATAT
TCAAAAAAATCAACAAATTTTAAAAAAAACCCTAAATGAATACAAACGGA
AACAAATGAACCTAACTGTATATCAAATTGGTAACATAACCACACAGAGA
AAATAATTCAAGTGACTTTTGAACACAGTACTCTGACTGTACATCCTTAG
TGGGATATATTCTAAGGACAAAAAGAACTGCAAAGAAATCTTAAACTTCA
CTTAGTAGTTTTATTGTTAGTAATGGTATT
>rnd-5_family-679#snRNA ( Recon Family Size = 40, Final Multiple Alignment Size = 40 )
TGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATACAGAGAAGAT
TAGCATGGCCCCTGCGCAAGGATGACACGCAAATTCGTGAAGCGTTCCAT

>rnd-5_family-841#LTR/ERVL ( Recon Family Size = 41, Final Multiple Alignment Size = 38 )
TGTGCAGTAAAGGATTAACCTTGCCCAAAGAGAGGTCTGGCTCTTTGCCC
TCGGCTCCTGGGAGGTAACCTCTAAGCCCTTGGAATGTCCTGCCTGATAG
GAGTGTCTTTGTTTACCCTGGGGGCCTTGGGCCACGCCGGATAGTCTATG
CTAACAATGTGATTTATGGTGGGGGCCTTGGGCCACGCGGTATCAGCTGA
CCTCCGGAGGGGCTGGAGACTAAGGTCAGCCACGCGGGCGGTCAGCCGTG
CCTACGTGACCGAGCCCCAATAAAAACTCTGGACACCAAGGCTCGGGTGA
GCTTCCCTGGTTGGCAATACTCCGTGCGTGTTGTCACACATCGTTGCCGG
GAGAAGTAAGCGCTGTCCACGACTCCACGGGGAGAGGACGACTGGAAGCT
CGCTGCCTGTAACCGTGAGTATAACAGCTTTCTGAGTTCTGTGAGTCCTT
CTAGCGAATTATTGAACCTGAGGGTGGTCTTGGGGACCTCCTGAACC
>rnd-5_family-1180#LTR/ERVL ( Recon Family Size = 39, Final Multiple Alignment Size = 38 )
CCTTTTTGCCTGCTCTGTGANAATGGAGCTGGGCCCTTTAAATATCCTTC
GCCTGGCACGATGTTAAGCTTTGTCAGTAGAGGGCGCTGGAGGGACACTG
CAGGAGGAAGGGGTTTTTCTTCCTGGTTCCGGTGTGCTCTCTCAGCAGGT
TCCTGCGGCACGTGGCCTCCCATGCCCGGCTCCTGCGGAGGCGGCTTCTC
CAGCGTCGGGCTCCTGCAGCGCACAGCGGCCGGCAGCTTCCCCNGGANCT
CCCGTCGGGCGATTCNGTGGCGGAGTGCCTCCGGCGAGACACCTCCCCGT
GAACGTTTCTTGGTACCTGAGACGGCATTTCCGGCAACCTCCAGAGGGCA
GATTTCCAGCAAGTCCTGCCGGCGTGACAGCACCNCAGCGACTTCTCTGC
CATCCAGTGGGCCATAGCCACGCCCTCTCCAACGAGGTCTGGATCTCAGC
CCTGGGGNAAGGGGGACTCTTCCTTGGGCGCTCTATCTCAGCCCTAGGGG
TAGTGGCTGCTCCTTATATCTGCTATTCCTGTATTCTTTAGAGTTCTCTT
TACCTCTTANTAGCCAATCCCTCGTTACTCCAATCCCCTGTTATAGTTAA
TAATTCTTTATATTAAACTTTCCCTGTTCAAATTACTGTGTGGTTTCTGT
CTCCTGACTGGACCCAG
>rnd-5_family-846#LINE/L1 ( Recon Family Size = 38, Final Multiple Alignment Size = 38 )
GGCCACAACTAGAAACATGAAAATTATGAAAGGGAAAAGCTCACCGGTAA
AGGCAAACATACAGTAAAGGTAGTAAATCAACCACGTACAAAGCTAGTAG
GAAGGTTAAAGACAAAAGTAGTAAAATCATCTATATCCACAATAAGTAGT
TAAGGGATACACAAAACA
>rnd-5_family-472#LTR/ERV1 ( Recon Family Size = 39, Final Multiple Alignment Size = 38 )
AAAGACTCAGGAAGAANCTTTGACCTTCCCCCTAACTGCCTAAAGAATTT
AGATAGAGGGCCTGTTCCNGGAANAGAGCTATCACCAGAGATANCTGCAA
AGAATATGGGCTAGGTGTGGCGGGGAAACTCGGCAGGGCCTGGAGATCAG
AGTCCNCTCTGTGTCCCATTGTCTCTGCATGGCCCAGCAAACATTTGTTT
ACCAAACATTTGCTTTTCCATCTCCATGTGAATTGCCTTCCTCCCCTTTG
AAGTCCCAAACCACTACCCCCAACATCCTCTTTTGTCTTTAGCTGAAGAT
GGTATTTAAGGTGAGGGTTTCGGCCATTTTGGCGAGTTACTCAGTTTTCC
TGGGTCTCTCCCATGTATACATGTTATTAAACTTTGTTTGATTTTTCTCC
TGTTAATCTGTCTCATGTCAATTTAATTCTTAGACCAGCCAGAAGAACCT
AGAAGGGTAGAGGAAAATTTCTTCCTCC
>rnd-5_family-253#DNA/hAT-Tip100 ( Recon Family Size = 41, Final Multiple Alignment Size = 37 )
CCAAGAGGGGCCCCTGCCCTGGCCCCGCTCTGGCCTCCTCTGGCCGCGCC
TTCCCCACGGCAAGGAGTCCGCAGGGCCAAGGGCGTGCTCACTCTTCTAG
ACCACTCCATGGGTACCCGGGACCCTGGAATTCCCTGCCCAAACGGCCCC
GAGCCCGCTTCCAGGCCTCTTCCCCGGGTCCGTCCTCCTGAGGGCGGACT
GCGCCGCCGGTGTGCGCACCCTGGGCCCGAGGGGTGGCCGGGGCAGCTGT
TTGTGGGGGTGTGTGGACGGAGCTTGGACGTGCAGGCTGGGGTGTCCACA
GTGCGTGCAAGGCCCCCCTCGCGGTGTGGGACGGAGCCGGGGGTGGGAAG
AGAAGGGGGGGGGCGGTGGGGCTGGGGGCCCTCCTACTGCCACATCGGCA
TGGAACTCCGAGGAGTCCGAGAATTCTAAATTNAANCTGGCCTTCCAGGT
CGTTATGAAGGTATATTTGTCAAGGTAGGAGGATAGAACATATTTTATTT
AACAGTTTGTTAGCTTGATTTATAACTTTTAAATATTTAGACATATGGTA
TGTGGGCCTCCGTTTGTACTCTTGCCCCGGGCCCCGCGAATGTTAGGGTA
GGCCTGCCCACATCCTCTAGNCCCAGTAGGAGCCGCAGGNCACACTGGCA
TGT
>rnd-5_family-73#DNA/hAT-Charlie ( Recon Family Size = 40, Final Multiple Alignment Size = 37 )
GCTACTCAAAGTGTGGTCTGNGGACCCGCAGCACTCATCCCCTGAGAAAT
GCAGACTCTCAGGCCCCGCCCCAGACCTACTGAATCAGAATCTGCATTTT
AACAAGATCCCCAGGTGATTCGCGTGCACGTTAAAGTTTGAGAAGCACTG
CT
>rnd-5_family-1198#DNA/hAT-Tip100 ( Recon Family Size = 37, Final Multiple Alignment Size = 37 )
TTGAACTTGTGTTTTGTAAGTGAAGTCCGATGGGACAATGGAGCATGCGC
GTGAGCAGAGGAGATGTGCGCCGCCGTTCCTTGCCGCCCCGTTCGCATAN
AGCGTTCGCGATGCCCATGAGCACAGAATTCCGGTGGACCCACGATGCGT
GGAGTTCAGCGAGACTCAAAGCGAGTGCAAGGTAAGCGTGTTACATCTAC
GACTGAGTAAGCGGGGGCGCTGACAGCCCCGAGAGGCCACGCTTTCCGTT
CGAACCAGAACTTGCTTCGAACGCAGAAAGAAGGCAAGGCGTTCTAAGAA
ACACGAACGACCAAGGAACCCTATCATATCCTTTCTTACTCGTGTTACTT
CCCTGTATTAGCCAACCACTTACGCTGAAAATGATGACATAGAAGGAAAG
GGAAAGATAGGGCAACCCATAGTTCCTTTTCCTTTCAGTCCTTCCTTACT
CATCAGTAAGCCGAAGGTAGAGAGTGTTGGTAGAATGTGCGCGTGTCAAG
AAGTGAAATAAAAACAGTTGAGTTCGTTTGTGCAGCGTTTCCACTGTTCT
GGTAAGAACGAAATACATACGCATGTACGAGCTACGAAATACGAATTGTG
TAATTTCAGTGATTCCGCATACGAGTTAAATGCTCTTATATTTTAAACTG
GCATTGCACAATATAAAGATGAACGGTAAAATTCATGCTAATAATTTAAA
ATAAATTTTTTTACTTAGAACGACATCAAATAAAAAACACCATGACAAGT
CGAGAGAGACCGCGGAAGAAAGGAAAAAGCTTTATATTTTAGTACCTTTA
ATGGCACTTTTTTCCTGCTTTTTGAACAAGGGGCCCCGCATTTTCATTTT
GCACTGGGCCCCGCAAATTATGTAGCC
>rnd-5_family-247#LINE/L1 ( Recon Family Size = 40, Final Multiple Alignment Size = 37 )
ATTCTTAATTGATCTAACAGATAACAGTTTGTTCAAAATAATAGCAACAA
TGTATTCGATTATGTATGCTTATGTATATGTATATATGTATGCGTGATGT
ATAGCTTATATATAAGTGAAATGAATGACAGCAATGTTATAAGGGACGGG
AGGGAGGAATTGGGAATATTTTGTTATTATAAGGTACCTGCACTACNCGT
GAAGTAGTATAGTGTTATTTGAAAGTGGACTTGGATTAGTTGTAAATGTA
TATTGCAAACTCTAGGGCAACCACTAAATAAAGAAGTATAATTGATATGC
TAAGAGAGGAG
>rnd-5_family-294#LTR/ERVK ( Recon Family Size = 44, Final Multiple Alignment Size = 36 )
TCCATCCATCTACCCGTCCGCCCATCCATCCGTCCATCCACCCATCCACC
CGTCCATCCACCCATCCATCCATCTGTCCACCCATCCATCCACCCATCCA
TTCATCCGTCCATCTATCCACCCGTCCATCCATCTATCCTTATCCACCCG
TCCATCCATCCACCCATCCATCCATCCATCCACCCGTCCATCCATCCATC
CATCCATCCGTCCATCCATCCATCCATCCATCCATCCGTCCATCCATCCA
TCCACTCATCCATTCA
>rnd-5_family-978#LTR/ERVL ( Recon Family Size = 39, Final Multiple Alignment Size = 35 )
TGGTGGCTTTGTANTGTGTCAACTTGGCTAGGCTGAACTACATTTCCCAG
AATTCCCTTCCCTGTATGTCCGGTTAGGGTGGGCCACAAGAGANATTCTT
GCGNGAGATTTGGAGGGCGGAAGTGAAGCAGCGGCCATTTTGTAGCTCAC
GCACGTTGTCGCTGATCTGCTGGCTCACCTCGCTGGCGTGGGGCAGCAGC
TGGGCCCGCAGCTNCTCCACCTTCCCCCGGACCCTCCAGCTTCTCCGACT
CCTGGGCCAGGTGCGTGTGTTTTAGCTCCGTGATGAAGGGCNCCAGCTTC
TGCAGGACACCTGCATCACGTCACCGAGGTCGGAGGCGAGGAGAACTGAC
ACGGGTTCCAGTCCGTCCTCGTGGGTTCCAGCTCGTCCTTGCGNGTTCCA
GTCTCCTCTAATTCTGCCCTGTGGACTTCAGGCTCCAGCACCAGACGCAA
AGACAACAGCCTTACANAGACTGCTTAACCAGCTCCCACAATTGCGTAAG
GTCAAATCCCTGTAACAAATCCCTTATTCTGTATAACTCNTAGTGGTTCT
GCTTCTCTGATCGAACC
>rnd-5_family-351#DNA/TcMar-Tigger ( Recon Family Size = 39, Final Multiple Alignment Size = 35 )
CTGTAGAAACTCTCTTAACCGACCTCCACTTAACCAAATCAGACAAGGTA
CTCCTTCCCTCTGTAAAACATACCAGATGCCCACGGCACACTGAACGCTC
ACAGGTTCAGGCTACTCTCTAGTANGCTCTGCGCTTCCCACCAGTTGTGA
TGTACCAAGAGTCAGCTGTGTTTGTTCCCAAACCTGTTTATGCCAGTTGT
ACTTGTNATTGTAATATGCAAATATTATATGTGTTATTTACANAAATATT
ATGTAAANTGATGAAAGATTCGATGGAGACGAGTCGCTATAAAAATTGCT
GTCGAATTAGGTGTGGGCGAGACAATATAAAAGATTGGGGGAAAAGCAAA
AATCTAGAACAATTGCTTCGCAAGTGTCTTTAAGTTCTCGTTCCACTTTA
AAGAAACCGAAACTGGAAATCGTAGACGATGCATTATGGGTGGTTTATGC
AAGAAAGACGGCCGGAACTCCAATCAGCGGACCCATACTCAAAGAAAAGG
CCTTGGCCCTACATCAAAAGATTGGCAAATGAATGTACATTTATATGTTT
TAAGTTAAAATAAAATGTTTAAGNTATGTATGTATCATTTTTTATGATTC
CCTACTTTAACTGACTTTTTCGATTAACCGACCAGCTACCGGTCCCGATC
GCGTCGGATAAGAGTAGAACTGTAACGTTTATTCTT
>rnd-5_family-1121#LTR/ERVL ( Recon Family Size = 42, Final Multiple Alignment Size = 34 )
TGTTTCCTTGGNTCGACCCCGGAGGTCGCCTGCAGACAGTTCACCGCACG
CGCCAATGGCTTCCTGCGTCTCTGCCTGAGGGCNTTCTCTGGCCACTGCC
ACCCGCTCGGNCCAGGTGCTGCCNGGGAATTAACGCCCCCAGAGCAACCC
TCAACCAATGAGAAACCGGAATTGGTGGATAAATACCCATGTTACAATTC
TGAGGCGCGTTCCGCACGGTCTCTCAGAGGGTCCCCAGCGGACTGAGCCC
CAGTTGCCCACAGTGGTTAACCNGCTCATTAACGCACCTTTGTTGGCTTT
CCTCCTCCCTGTTCATTCCCCACTCTCNTACCGTGCTTCCTGGGATCACC
TCCCAAATAAACTACCTGCACCCAAATCCTTGTCTCAGGCTCTGCTTTCG
GGGGAACNCAAACTAAGACACTCAAGGAGAAAATGTGGGCANCCAGGTAA
GTGTGTTACATTGAGAAAAAGTGTTTTCTNACA
>rnd-5_family-369#LINE/L1 ( Recon Family Size = 38, Final Multiple Alignment Size = 33 )
CGTATAAAGATATAATTTTGTGACAATACAACATAAGACGGGACGGAACT
GTATAGGAGCAAGTTTTTGTATGTTATTGAAATTAAGTTGGTATTAATTC
GAACTAGATTGTTATAANTTAAGATGTTAATTGTAATCCCCAGGGCAACC
ACTAAGAAAATAACTAAAAAAATATACAAAAGAAATTGACAAAGTAAATA
AGTACATAAGAAATATANAGAATTACATGAGAAAAGAATCAAAATGGTAC
ACTAGAAAATATCTATTTAACACAAAAGAAGGCAGTAATGGAGGAANTGA
GGAACAAAANATATAAGACATATAGAAAAATAGCANAATGGNAGAAGTCC
NTCCTTATCAGTAATTACATTAAATGTAAATGGATTAAGCTCTCCAGTNA
AGAGGCAGANATCGGCAGAGTGGATTAAAAAANATATGATTCAACTATAT
GCTGTCTCAGAGANAAACACTTCAGATCCNAAGGCACANACAGGTTGAAA
GCGNANGGATGGAAAAAAGNATATNCCATGNAAACTGTAACCAAAANAGA
GTACAGTGAGGCAGCTATACTAANACCAGGCGATACTGGACTCAAAGTCA
AAAATCGTTNCTAGAGGGGCTTCCCTGGTGGCGCAGTGGTTGAGAGTCCG
CCTGCCGACGATGCAGGGGACGCGGGTTCGTGCCCCGGTCCGGGAGGATC
CCACATGCCGCGGAGCGGCTGGGCCCGTGAGCCATGGCCGCTGGGCCTGC
ACGTCCGGAGNCTGTGCTCTGCAACGGGAGAGGCCACGACAGTGAGAGGC
CCGCGTAACGCAAAAAAAAAAAGTTNCTAGAGACAATGACATTCTATGNT
GATAAAAGGGTCNATCCGTCAAGAGNATGTAACAATTTCAAACATAGGCA
CACCNAGCAACAGTGCCCCGNAACGTATGAAGCAGACAATTTCAAACATA
GCGCACCTAACAACAGTGCCCCGAAATATATGAAGCAAAACTGACAGGAT
TGAAGGGAGAAATAGCTCNACAATAATAATTGGAGACTTCAATACCCCAC
TTTAAATAATGGATAAAACAACTAGACAGAAGATCAATAAGGAAACAGAG
GACTTGAACGCTACTNTAAACCAACCAGACCTAACAGACGTGTACAGAAC
ACTCCACACAACAGCGGAATACACGTTCTTCTCAGTGCATGTGGAACATT
CTCCAGGATGGATGTAGGGCCATAAAACAGGCCTCGATAAATTTAAAANA
TTGAAATCGTACCGAGTATCTTCTCTGACCACAATGAAATGAAACTAGAA
ATCAGTAACAGAAGGAAAACTGGGAAATTCAATANATGCGTGGAAATTAC
ACGCTTNNAAATAACCAATAGATCANAGAAGGAATCAAGGGGAATTAGAA
AATNCTTTGAACGGAGCANTGAAAATGCCGTGCNGCTGAGGTTTCCACCA
TGGGTGC
>rnd-5_family-947#LTR/ERV1 ( Recon Family Size = 34, Final Multiple Alignment Size = 33 )
AGAGACTGAATATACAAACGGACAATGGCCAGACCATATATGANAATAGA
ACTCTGACCCACAACCTGCAGCAACCAGCCCAGGAAACCAACCCANCCTC
TGCAGCAATCAGCCCAGGAAGCCAGCCTGCTGTAAGTCAGACTTGCAGGA
AGTCAGACCGCTATCTCCAGCAACCAGTCCAGGAAGCCAAACAACAACCT
CTGTAACAATCGGCCCAAAACGGCCAGGACTTGATCAATGACTGACAGCT
TCCCTAATTTTTTCCCTGCTTCCAACTTAGGACCAACCAGAGAAAGCCAA
TATGCNCCCCTAACCAATCACATAGGATGCCCCGCTTCTAGTTAGCCCGC
CTCCAGCTTCCCCATGCCAACAGCCTCCAATCAGGGCACACCTGAAGCCT
TCCCTTTTTCCACTATAAAGCTTTCCCACTCCTCTGCCTGCCTTTGAGTC
TCTGCCAAACGCAAGTGATGGTGGCTGACTCCCTTGCTATAGCAAGCTCT
GAATAAATAGCCTTTGCTTGTTCTCATTTGGGTGGTCTTCGTTTATTTC
>rnd-5_family-38#LINE/L2 ( Recon Family Size = 37, Final Multiple Alignment Size = 33 )
ACATCCATCCTNNCAGTTGCCTTGGCCGACATGNACCATCANCTCTTGNC
TGGATGACCCCACAGGNAAACTNTCCCAAACCATTTCTTCTGGCTGCCTG
CCTCACTCTCTCCAATCCATCCTCCACACTGCCGCAGGGTGATCTTTCTA
AAACGCAAATCGATCATGTCACTCCCCTGCTTAAAATCCTTCAGTGGCTC
CCCGTCGCCTNCAGAATAAAGTCCAAACTCCTTAGCGTGGCACACAAGGC
CCTCCGCGATCTGGCCCCTGCCTGTCTCTGCTTCCATCTCCTGCCATCCT
CCCCCACCTCCTCCAGCCTCCTGTNCTCACNCTCCCGTCTCACTGAGATC
ATGCCTCTGCCTCTACGCACATGTCGTTCCCTCTGCCTGGAGNGCCCTTC
CNTCCCCTCTCTCGGCTGAACTCTATCTAACCACTCACTCGGCTCTGCCG
TCANNTCCTCCAGGAAGNCTNTCCTNATTCCTACCT
>rnd-5_family-1320#LINE/L1 ( Recon Family Size = 34, Final Multiple Alignment Size = 32 )
ATATAAAACTCACTGGGGTAAAGGTAAATATATAGTCAAATTCAGAATAC
TCTAATATTGTAATATGGTGGTGCGTNANTCACTTAACTCTAGTATAAAG
GTTAAAGGANAAGAGTATTAAAAATAACTATAGCTACAATAATTTGTTAA
CGGATACACAATATAA
>rnd-5_family-78#LINE/L1 ( Recon Family Size = 34, Final Multiple Alignment Size = 32 )
GAGCATGGGGAGCTGTTCTGGCTGACGAGAAAGGCCTGGAGCTGAAAGTG
GGGCCAGAACACTGAGGGGCTCCCTCTGCCGAGCCAACCCCACCACAAGT
GCAGGGCGCTGCCAGCGGAGTCTGAGGCCTGTGCAGCACTGATGGTAACC
ATGGNGACAGAGCACCAGGNCAGCTCTGCCCCCGACCAGACTGACCGAAC
ATGCGTACACATGCACACAGGCACACACGCACNTGCATATACACATACAC
ACACACGTACATACACACACGTGTATGCACACATGCACACATACACATGC
ATGCACGTGCATACACACACACGCACACGCACGAACGCGCACGTGCACCC
ATGCACACACATACACGCGCACACACATGCACACACGTNCATGCACACAT
ACACACATGCACGCATCACGCGCGCGCACACATGCACGCGCACGTGTGCA
TNCACACGCGCGTACATGCGCACATGCACNCAANCGCACGTACACACGTA
ACACACATGCGCACAGNCACACGTCCACATACGTGCACGCACACATGCAC
GCGCATACTTTGCACACACNCACACGGACACGTTCACAACACACACATAC
ACACACACACACACTCACACACTAATGGCC
>rnd-5_family-129#DNA/hAT-Tip100 ( Recon Family Size = 32, Final Multiple Alignment Size = 32 )
GGGCCGGGACTAGGGTGAGGCGAGTGAGGCACTCGCCTCGGGCGCAAAAT
TTAAGGGGGCGCCAAAAAACTCAGTAATCAAGATAAATAATATTTTAATG
CAATATTTTAAAAATCAAAATTAATGCCAAAAAATCCATGATGAACAAAA
TATCAAAATTTTAAATAAAGACAGGATCAGTATTCTGATTTTTCCTTTTG
CCTCAGGCTTCAATATGGCTCGGCACGGCACTGTTACTGATCCTGTCTTT
ATTTAAAATTTTGATATTTTGTTCATCACGGATTTTTTGCATTAATTTTG

>rnd-5_family-111#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 31 )
TGTAAGCAGATAGGGTAGGGGGTCCCCGGAGAAAGAGAACCAGGCATGGC
TTTCTTGACATAAGAGAAGCCATTTTTGGCCTAAGCCATTTTGTGATCTA
AGCCTGGCCACAGTGCTTGCCCTTGAACAGGTCTCAATCAATGATCTTAA
GGGAACAAAAGAATGCAGGAACGAACGACTGTTACCAGGCAAGAGAAGTA
ACAACAGCAAAGATAAACATCAGTTGTAAAGACTCCCAGTTCCGTCTCAA
NGGTAAAGATTAGCCCGAAGCACTTTCTTGAGGTTCTGCAGGATCTAAGC
CCCCTGAGACTCAGCCACCAGATCGACTGGAACCTAAGGAATGATGATGT
TGACCTTTTCTGACCCTCGTGACTTCAATCAACTAAAGCTTGGACTCTGT
CGACCTTTGCCCCAATTCTATGCTGAATTCTCCTCTGCTCAAGCCCCTTC
ATGAATATGCATGTACCCTTAGCTTAAAACTTCCCCAATTTTGCTGTTCG
GGGAGACACTGCTTTGGGAAAGATCCCTGGTGTTCTCCTTACTTGCTGCA
AGTAATAAATCCTTCCTTCTCCCGATCTTTGGCTTGGTTGTGTCTTTTGG
CTCGACACCCACCAAGAGGCGAACCCAGTTTTCGGGTAACAG
>rnd-5_family-3462#DNA/TcMar-Tigger ( Recon Family Size = 32, Final Multiple Alignment Size = 31 )
TATCCCCCGCTTTTCGAAAGTTCGCTTTACGCCACTTCGCTTTTACGAAA
GACCTACGTTAGTACCTGTTTTCGCTAACCGAAAGAAATCCGAAGAGGAT
TTTCGCTTTTACGAAAAAAGGCGAAAAGCGAAAATAGCGTTCAGCGTTTG
TTTTGCAGCGAGCCGTTACAGAGGCAGCGCGCACCCCGAGCAGCGAGAGT
GGCACCGCCAAGCTCCTTCCCCGGGAACTACACTCAGCATCTCAGCATCA
AGCCGCCATAGCTTTGAACTGTGTCTGTGAGCATCTGTGCTTTATCTCGA
TTTATTTTGTGCATCCGTTAGCAAGATGTGTCCTAAGGTAATTGCTTCTT
CGCTTTACGCCATTTCGGCTTACGAAAGGTTTCACAGGAACGCTCTACTT
TCGGATAGCGGGGT
>rnd-5_family-255#LINE/L1 ( Recon Family Size = 38, Final Multiple Alignment Size = 31 )
AAATAACCAAGAGATCACCGAAGAAATCAAAAAGGAAATCGAAAAATACC
TAGAGACAAATGACAATGAAAACACGACGATCCAAAACCTATGGGACGCA
GCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCTGTACAAGTCTACNTCAA
GAAANAAGAAAAATCTCAAATAANNAATCTAANCTTACACCTAAAGGAAC
TAGAAAAAGAAGAACAAACAAAACCCAAAGTTAGTAGAAGGAAAGAAATC
ATAAAGATCAGAGCAGAAATAAATGAAATAGAAACAAAGAAAGCAATAGC
AAAGATCAATAAAACTAAAAGCTGGTTCTTTGAGAAGATAAANAAAATTG
ATAAACCATTAGCCAGACTCATCAANAAAAAAAGGGAGAGGACTCAAATC
AATAAAATCAGAAATTAAAAAGGAGAAGTTACAAACGACACCACAGAAAT
ACAAAGCATCCTAAGAGACTACTACAAGCAACNCTACGCCAATAAAATGG
ACAACCTGGAAGAAATGGACAAATTCCTAGAAAGGTACAANCTCCCAAGA
CTGAACCAGGAAGAAATAGAAAATATGAACAGACCAATCACAAGTAACGA
AATTGAAACTGTGATTAAAAAAAAATCTTCCAACAAACAAAAGTCCAGGA
CCAGATGGCTTCACAGGTGAATTCTATCAAACATTTAGAGAAGAGCTAAC
ACCCATCCTTCTCAAACTCTTCCAAAAAATTGCAGAGGGAGGAACACTCC
CAAACTCATTCTACGAGGCCACCATCACCCTGATACCAAAACCAGACAAA
GATATCACAAAAAAAGATAACTACAGGCCANCATCACCCTGATACGAANA
CAGACGCAAAGATGCCAACAAATAANAGAAAACTACAGGCCAATATCACT
GATGAACATAGATGCAAAAATCCTCAANAAAATACTAGCAAACGGAATCC
AACAGCACATTAAAAGGATCATACACCGTGATCAAGTGGGGTTTATCCCA
GGGATGCAAGGATTCTTCAATATACGCAAATCAATCAACGCGATACACCA
TATTAACAAATTGAAGGANAAAAACCATATGATCATCTCAATAGATGCAG
AAAAAGCTTTTGACAAAATTCAGCACTGATTTATGATAAAAAAAAACTCT
CCAGAAAGTAGGCATAGAGGGAACCTACCTCAACATAATAAAGGCCATAT
ATGACAAACCCACAGCCAACATCATTCTCAACGGTGAAAAACTGAAANCA
TTTCCTCTAAGATCAGGAACAAGACAAGGATGTCCACTCTCACCACTATT
ATTCAACATAGTTTTGGAAGTTNTAGCCACGGCAATCANAGAAGAAAAAG
AAATAAAAGGAATCCAAATCGGAAAGGAAGAAGTAAAACTGTCACTGTTC
GCAGATGACATGATACTATACATAGAGAATCCTAAAGATGCCACCAAAAA
ACTACTAGAGCTAATCAATGAATTCGGTAAAGTNGCAGGATACAAAATTA
ACGCACAGAAATCTCTTGCATTCCTATACACTAGCGACGAAAAATCTGAA
AGAGAAATTAAGGAAACACTCCCATTTACCANTGCANCAAAAAGAATAAA
ATACCTAGGAATAAACCTACCTAAGGAGACGAAAGACCTGTACGCAGAAA
ACTATAAGACACTGACGAAAGAAATTAAAGATGACACAGATGGAGAGATA
CACCATGTTCNTGGATTGGAAGAATCAACATTGTGAAAATGACTATACTA
CCCAAAGCAATCTACAGATTCAATGCAATCCCTATCAAANTACCAGTGGC
ATTTTTCACAGAACTAGAACAAAAAATTCCANAATTTGTATGGAAACACA
AAAGACCCCGAATAGCCAAAGCAATCTTGAGAAAGAAGAACGGAGCTGGA
GGAATCACGCTCCCTGACTTCAGACTATACTACAAAGCTACAGTAATCAA
GACAGTATGGTACTGGCACAAAAACAGAAATATAGATCAATGGAACAGGA
TAGAAAGCCCAGAGATAAACCCACGCACATATGGTCACTTGATTTTCGAC
AAAGGNGGCAAGAATATTCAATGGAGAAAAGACAGTCTCTTCAATAAGTG
GTGCTGGGAAAACTGGACAGCTACATGTAAAAGAATGAAATTAGAACACT
CCCTNACACCATACACAAAAATAAACTCAAAATGGATTAAAGACCTAAAT
GTAAGGCCGGANACTATAAAACTCTTAGAGGAAAACATAGGCAGAACACT
CTATGACATAAATCACAGCAAGATTTTTTNGACCCGCCTCCTAGAGCAAA
TGAAACAAAAGCAAAAATAAACAAATGGGACCCAATTAAACTTAAAAGCT
TTTGCACAGCAAAAGAAACCATNAANAAGACAAATAGACAACCNNCTGAA
TGGGAGAAAATATTGCAAATGANGCGATTGACAAAGGATTAATCTCCAAA
ATATACAAGCAGCTCATGCNGNTCAATATCAAAAAAACAANCAACCCATT
NAAAAATGGGCAGAAGACCTAAATAGACATTTCTCCAAAGAAGATATACA
GATNGCCAACAGACACATGAAAAGATGCTCGACATCACTAATCATCAGAG
AAATGCAAATCAAAACTACAATGAGATACCACCTNACACCGGTTAGAATG
GCCATCATCAAGAAACCTCAATGTTCACNGNAGCACCATTTACAATNGCC
AGGATGTGG
>rnd-5_family-477#DNA/TcMar-Tigger ( Recon Family Size = 30, Final Multiple Alignment Size = 30 )
AAGAGAGAGAGAGACCACATTCACATAACTTTTATTACAGTATATTGTTA
TAATTGTTCTATTTTATTATTAG
>rnd-5_family-2814#DNA/hAT-Tip100 ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
GGCCGACTTNTCCATTAGGCACAGCAGGCACAGTGCCTAGGGCCCACGGT
ACTTTTAGGGGCCCGCGAAAATGTTTTAATTTCTTTTAAAATCAGAAGAA
AAAAATGAATTTTAGGTCGAAGAAAATGTTATATAATATTAATATATTCG
TCTTTATACCAACGCAGTCGTAAAATATAATTTTTAATTTTTTTAATGGA
GGAAGGGGCCCACGAAGGCAAAAGTGCCTAGGGCCCACGAAAGTCATAAT
GCAG
>rnd-5_family-975#DNA/hAT-Tip100 ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
TTTATTGTTTTGTTGATTGTCTAGACTTAAGAAAGTGATGGAGAAAATGT
TAATAATGCAGATTAAACTTAAAAGTGTGTCGTGTCTGTAGCCGTTACAT
TGTGAATAGCACAAAAAATTGAGGAAATATTCTTCCAGTATTCGAAAACT
ATTATCCGATTCAGCAAAGAAGTCGCTCACGTCATTGACGAACGAGTGAA
GTTCCTAACATACGTCTTCGTTGTTTCACTTTCGTCTTACTCGTTAACGT
AAACGAAAATATCAACCAACATTCATGTCGGAACTACACTCGTTCGTCAG
CTGCAACCATAGGTTGGCTACGGATACAAGAGTTTGGCAAAAATCAACGA
AAGCATTCTGTGAGAATCAATTGGCTATATGGAATTTACAATAAGAGTAT
TGTATATTTTATTATTTGTAAATTGTGTGCTACACATCCTTTATATCAGT
AAAATTTATAATACTTATGTACGTATATATATGCATGCAATTTTTTTTTC
CGGAGAGCCGGCTGTTAAACATTTACCAGCA
>rnd-5_family-5288#LTR/ERV1 ( Recon Family Size = 35, Final Multiple Alignment Size = 30 )
GGGACAGAGTAAAGGGACAGAGTAGGTGATTAAATAGTTAGTTTAGAAAT
CCCACTAGGGGATTGTAGGTAGAGAAAAAANTATGGGAGACCNCTGTAAG
TTAATGATCACTCAAGAAAGCAGGCTTGCTTAACCACGAAACCAAGCAGG
CTTGCTTAGCAACAAAACCATGCAACAGAAGCACGAGACATGCCCCAAAA
CAATAAAACAATGGTGGAATGAGACCCGCATCCTGCCCAGTGAGNTCAGT
AAGTTAATGATCCCTAGGACATGCTCCTCTGCGCGCACNAAAAACAAAAA
TATAGGGAAAAGGTGACAAGATCATTATACTGAAACCTGAGATGATTTAC
CATATTTTAGTATATGTTACCGCCCTTTTGCTCATTTCNATAGCGCCATG
ACAGTCCCGGTTTGACCATGTAGGGACAAGAAAACTCCCCCGCCCGACGT
GGAGGAGGAGCTGATGATGGAAGCGTGACGTCTACTCAAGAATGAGGAAG
AAGGTGGTCTTCTCCCCCTCCCCACTTTTCCTTTGATTATAAAAATGTAG
CCCACTNAGTTCTCGGGGCGGCGCCCCCTCGCCTGCCCGCTTGTANCCCT
CACAAGCGTCC
>rnd-5_family-146#LTR/ERVL-MaLR ( Recon Family Size = 36, Final Multiple Alignment Size = 29 )
CATGAGCTTTTAAAAGCAGAGAGNTTTCTCCGGCTGGTGGCAGAGATTGG
AAGCAGAGTGGACCTGAAGACGGAGAGGGATGGATGGGGAATGCAGGCAT
CCCCTGGCTGACAGCCAGCAAGGAAACGGGACCTCAGTCCTACAGCCGCA
AGGAACTGAATTCTGCCAACAACCTGAATGAGCTTGGAAGCGGATTCTTC
CCCAGAGCCTCCACAAAGAATTCTGTGAGACCCTGAGCAGAGAACCC
>rnd-5_family-674#Unknown ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
AAGCGCATCTGTAGGCCTGAGCCGGGGCNTCNCCCCGGCAGTGGTGTGTG
TGTCTGCGTTCTGGGCCTGCTGTGCNTCTCCAGAGTGGGGCACTGTGAGT
CCCCTGNGCTCGTCTGGGCCGCGCGTGTGCGTGCNTGCGTGTGCACGCGT
GCGTGTGTGTCTGTGTGCGTGTGTGTGTGTGTCTGTGTGCGTGCACGTGT
GTGCGCGTGTGTCTGTGTGTCCGTGTGTGTGCACGTGTGTGCGTGTGTGT
GNATTCTCTGNGCGCGTGTGTGTGTGNACGTGCGCGCGTGCGTGTGTGTA
TGTGCGTGTGTCTGCGTGTGCGTGTGTGTCTGTGTGTGTGTATGTGTGTG
CACGTGTGTGCACATGTGCGTGTGCATGTGTGTGTGCGTCTGTGTGCGTG
TGTGTCTCCGTGCGTGTGTGTCTGTGTGTGTGCACGTGTGTGTGTGTGTG
GGTACGCCCGCGCGCGGGCACCACTGCTCGCCCCAGGTCTGTCCCTCGGT
CCNCGAGGCCACACCCAGGGTCACGCGGCCCCGAGAGTGCTTCGAGTCCA
GNNCTCCTGTCCCGGGACTCA
>rnd-5_family-471#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 29 )
TAATAAAAGANGNATGTATATACCTACATATGGATGNACGTGTAAAGAAT
ATTTNCTCAGGTATANAATATTCTCTANAAGAAACTGGTAACAGTGGTTG
CCTCCAGGGGGGGGAACTGGGTGGTGGGGATAAGGGTGAAAGGGAGACTT
ATTTTCACTGTATACCCTTTTGTACCTTTTGAATTTTGNACCATGTGCAT
GTATTACCTATTCAAAAAAATTTAAAAATTAAAGCTGAAATGTCAATTAC
AGAAAGAAAAAAAAACTTTCTGCAAGGAAGAAAGGCNGAAGAT
>rnd-5_family-7#LINE/L1 ( Recon Family Size = 33, Final Multiple Alignment Size = 29 )
AAAGAGGCGGCAGGCATCCAAACTAAAAACAGCCCTCGCGCCAAAAATAT
TAAACCCACACAAGCTACGCAGGGATGCTCCCACATATAAATAGCCCTCC
AAGACCACAGTAGATAACTGTTTCTCCTAAACTCACAGAGTAAGAGAAAT
ATAAGCAAAATGAAGAAGCAGAGGAACCACTCCCAGTTAAAAGACCAAGA
GAATTCCCCTGAAGGAACAAACAATGAAACAGACCTCTTCAGTCTAATAG
ACACCGAGTTCAAAAAGGAGGTAATGAAAATACTGAAGGAATTAAGAAAG
GCTATCGACAGAAATGCAGANTACTGTAAAAAGGAACTAGAAACTATAAA
GAGGAGCCAAGAAAAATTAGAAAACTCATTTGCCGAGATAAAAACTGAGC
TAAAGGCAATGAATAGCAGAATGAATAATGCAGAGNAACGAATAAGTGAT
CTGGAAGATACAATAATGGAAATCAACCAATCAGAACAGTAGAAAGAAAG
ACAAATGAAAAAAATGAAACCAATATAAGAGATATATGGGATAATATAAA
GTATGCCAATCTATGCATAATAGGGATCCCAGTAGGAGAAGAAAGAGAAA
AGGGGATCAAAAATGTATCTGAAGAAATTATGGCTGAAAACTCCCCAAAT
CAAAAGAAGGAAACAAATATCCAGGTACAGGAGGCACAAAGGGTCCAAAA
CAAGATGAACCCAAATAGACCTAAACTAAGACATATTATAATTAAAGTGG
CAAAAGTTAAAGAAAGAGGATTCTAAAGGCAGTAAGAGAAAAACAAAGAG
TTAATTACAAGGGACCCCCATTAGGCTACTGGCTGATTTCTCTACAGAAA
TGTTGCAGGCCAGAAGGGAGTGGTGAGATATATTCAAAGGCCTGAAAAGG
AAAAATATGCAACCTAGGATACTCTACACAGCGACATTATTATTTAGAAT
AGAAGGAGAGATAAAGAATTTCTCACACAAGCAAAAACTAAAAGAATACA
ACAATATTAAACCTATCCTAAAAGAAATATTGAAAGTTCTGCTCTAAATA
GAAAAGAAGCAAGCATCTATAGGAAAGAGAAAATCACAGTTGGAAAGTAA
ATCACTTAAATAAGCCAGTACACAGATTAAAAAAATCAAAACATTTTTGT
GAAAGCAATGATAACTACAATAAACAGCAAAAGGATAAATANGAAGATAT
AAANNGNGACATCAAAACATAAAACGTGGGGAGGAAAGTAAAAAAAAGTA
GTTTTTCCTGNTCTTTTAGANTGTGCCTGANCCTANATGACTACCAGTCT
AAAGCGGGTAGATACAGNNANGGGTTAACATACTTATAAACCCCACGGTA
ACCACAAATCAAAAACATAAAANAGATNCACAAAANCAAAATAAAGGAAC
ACAAGCATACCACANAGAAAATCATNAAACCACAATAGGAAAAANAAAAA
GAAGAAGAAAGGAACAAAGAAGAATTACAAAACAANTAATCAAAATGGCA
ATAAGTACGTATCTATCAATAATTACTTTAAACGTCAATGGACTAAATNC
TCCAATCAAAAGNCACAGAGTGGCNGANTGGATTAAAAAAAAACAAGCAA
ACAAAAAAACAAGANCCNACNATGTGCTGCCTACAAGAGACCCACTTCAG
NTGCAAAGGACACACNTANNCTNNAAGTGAGCGGATGGAAAAAGATATTC
CATGCAAGCGGAAACGANAAGAAAGCGGNGNTAGCNATANTTATATNAGA
CAAAATAGACTTTAAGACAAAGGCCACAATAAGGGGAAAAGAAGATCTTT
CTATAATGATAGAGGGACACCATACAAAGAAGAGGATATNACACTCATCG
NTACTTATGCACTCAATAGAGGAGCGCCTAAAATACATANAGCAAATGCT
AACANACNTNAAGGNAGGAACTGNCGGNAACACAATAATATAGGAAACTT
CAACACCCCATCTTCATCAATGGACAGATCATCCAGACGAAAATCAATAA
GGAATCATTGGGACCTAAACGACACGTAGANCAGTGGACTTAATCGACAT
TTACAGNACATTCCATCCAACAANAGCCAGAATACACATTCTTTCCAAGT
GCACATGGAACGTTCNCTAGGATTGACCACATATTAGGACGCAAAGCAAG
CCTCAACAAATTCAAGAGGATAGAAATTATNTCAAGCATCTTCTCTGACC
ACAAANGATGAAANTAGAAATCAACACAGGAAAAGAAATCGGAAAATTCA
CAAACGGTAACGTGGAGANTAAAGGACATGCTGCTGAANAAACCCAATNA
GTCAACAATGAAATCAACAGAGGAAATTNAANAACACCTTGAGGCAAATG
ANANTGGAAACACAATCATACCANAACCTACGGGATGCAGCAGAAGCAGT
TCTNGGAGGGAAGTTCATAGCGATGNANGCCCNCNTCAAGAANCAAGAAA
AANCTNAAATAAACAACCTAACCTNNNACNTNAAGGAATTCCAAAAAAAA
AAAAAAAAAGAACAAAAAGCCCAAAGTTAGCAGAAGGAAGGAAATAACAA
AGATCAGAGGAAATAAAAGAGANTAAAAGACAATAGAAAAGATCAATGAA
ACCGAGTTGTTCTTTGAAAGGGTAAAAANACCGACAAACTCTGGCCAGTC
ACCAAGAAAAAAAGAGAAAGACNCAAATAAATAAAATNAGAAATTAAAGA
GGAGACATGCCACAATTACCACAGAAATACAAAAAAGGGAATACGAGAAT
ACTATGAACAATTATATGCCAACAAATTGGATAACCTAGAAGAAATGGAC
AAATTCCTAGAAACATACAGCCTACCGAAACTGAATCAAGAAGAAATAGA
AAATCTNAACAGACCAATCACCNGTAAGTGANATNGAATCNGTAATCAAA
AAAAAAAAAAAAACGTCCCCGCNAACAAAAGTCCAGGACCGGATGGNNTC
ACTGGNGAATTCTACCANGCATGCAGGGAAGAATTTATACCAATCCTTCT
CAAANTCTTCCAAAAGACTAGAAGAGNAGGGAANACTCCCAAANTCATTC
TATGAGGCCGCCATCACCCTGACACCAAAGCCAGACAAAGACACTACNAG
NAAAGAAAGTTACAGGCCAATATCCTTGATGAACATAGATGCAAAGANCC
TNAANAAAANAGTAGCNAACCNAATCCAGCAACACATNAAAAGGATCATA
CACNATGACCAAGTNGGATTCACCCCAGGGNCACGAGGATGGTTCAACAT
NCGCAAATCAATCAACGTGGTACACCACATCAACAAAANAAANGACAAAA
GANACATGATCNTCTCAACAGATGCAGAAAAANCATTTGACAGGACTNAA
CATCCATTCATGATAAAAACTAATACTCAAAAATGTGGGTANAGANGGAA
CGCACCTCAACATAATAAGGGCTATNCATGACAAGCCCACAGCTACCANC
ATAGTCAGTGGTGAANAGCTGAAAGNCTTCCCNCTANGATATGCAGGGAC
AAGACAAGGATGCCCACNCTCGCCNCTTCTNTTCAATATAGTATTGGAAG
TCCTAGCCANAGCGATCAGAGAANAAATAAANAAATAAAAGACATATCCA
NATTAGTAAGAAGGAAGGGAAGAGGTAAAATTGTCATTATNTGCAAATGA
CATGATACTATATATAGAAAATCCTAAAGACTCCATCGAAAAACTATTAG
AACTNATAAANAAATTCAGCAAGGTNNCAGGATAAAGATAATATATAGAA
ACTNATTGCGTTTCTTTACACTAACAACGNANTANCAGAAAGGGAAANTA
AGAAAACAATCCCNCTTANAATNACATCAAAAAGAACNAANNACCCAGGA
ATAAACCTGACCAAGGAGGTGAAAGACNCGTACGCTGAAAACTACAAGAC
ACTGATGAAGGAAATTGAAGANGACNTAAATAAATGGAAAGATATCCCGT
GCTCATGGATTGGAAGAATTAATATTGTTAAATGTCATGAAATACTACCC
AAGGCAATCTACAGATTTAATGCAATCCCTATCAAAATATCCATGNCATT
TTTCACAGAANTAGAACAAACAATCCTAAAATTTATATGGNANCACAAAA
GACCCCGAATAGCCAAAGCAATCTTGAGAAANAAGAACGAAACAGGAGGC
ATCATNCTCCCGACTTCAGACTATATTACAAAGCTACAGCAATCAAAACA
GTATGGTACTGGCACAAAGANAGACATATAGACCAATGGAACAGAATNGA
GAGCCCAGAAATAAATCCACACGTCTATGGTCAATTAATCTTCGACAAAG
GAGNCAAGAATACANAATGGGGAAAGGACAGTCTCTTCGACAAGTGGTGC
TGGGAAAACTGGACAGCCGCATGCAAAAGAACGAAATTAGAACACGCCCT
CGCACCATACACAAAAATAAACTCGAAGTGGTATAATTAAAGACTTAAAA
TAAAGCATGACACCATAAAACTCCTAGAAGATAACATAGCCAAGACATTT
TCTTACATAAATTGCACCAATGTTTTCTTAGGTCAGTCTCCCAAGGCAAC
AGAAATAAAAGCAAAAATGAACAAATGGGGCCTCATCAAACTTACAAGGT
TTTGCACAGCAAAGGAAACCATAAACAACATGANAAGAAGCAACCTATAG
ACNAGGAGAAAATACTTNCAGANNATNTGACCAGCGAGGGNTTAATNTCC
ANAATATACNAANATGCTCNTACAANTCAATTANAAAGANACAANCAACG
CAATNACTAANTGGGCATGAAGNCCTGAGTAGGCANTTCTCCAACAGAAG
ACAAAATNCAGATGGCCAATAGGCATGTGAGNAGGTGCTCGAGCNTCGTT
GGTNANTAGACAAATGCAAGTCAAATCTACAATGTGTGTGTGCACCTTAC
CCCANATCAGTCAGAATCGNNATCNCTGGGAATGCCCANATATAACACAT
GCTGAAGAGGGTGTGGAGAAAAGGGAACCCTCCTACACTGTTGGTGAGAA
TGTAAATTGGTGCAGCCACTATGGAAAATAGTATGGAACTTCCTCAAAAA
CTAAAAATAGAGGGCTTCCCTGGTGGCGCAGTGGTTGAGAGTCTGCCTGC
CGATGCAGGGGACACGGGTTCGTGCCCCGGTCTGGGAAGATCCCACATGC
CATGGAGCGGCTGGGCCCGTGGACCACGGCCGCTGAGCCTGCACGTCCGG
AGACTGTGCTCTGCAACGGGAGAGGCTGTGACAGTGAGAGGCCCGTGTAC
AGCAAAAATAAAAATAAAAAAATAAAAATAGAGTTGCCATATGACTCATT
A
>rnd-5_family-948#LTR/ERV1 ( Recon Family Size = 29, Final Multiple Alignment Size = 29 )
GCAAGATAAAAATTAAAAATAAGAGGCTTAATTCTCCCTGTTGAAAATAA
GGGAAGAGACTTCCCTCTCCCTTTTTTAGAGCATTTACTTTAGAAAACTT
GAATTGTAAGTTCTTTCTCTGTCTCTTTGAAATGTATGTAAATTTTTAAA
AGCTAAATAAGCCTCTTGCCAGCTTTACGACCCAGGAATGTCTTTCTCAA
GGACCTGGGAGCCATCTCTTTGAAATGTAANCATCAAGGAAGATAGCGCC
CCTATCTCCCAGTTTCTGTGGGAGGATAGGAGCCTAACTTCGGCGGGCGC
CTCGCTCCAAGTTGCAAAACTACCTCCTGTCATAAAGATATGAGAAGTTT
ATTTTTCCTTTGGATAAAGCCAATTAGCTAACACAGATGGTCACCCCAAT
TACCAGGTGAATTTAGGATGAACTATGTGTGACAAACGGTGCTGTCAAGT
CCTCTTACTTGAGGACTAGTTATTGTTTATCTTGAGAACGTGTATGTAAT
GGGTGATCTGCTTGGCTATATAAAAGGGTGAGATTTCTTTCTGTCTTTGC
AGTCTCTTAGCGGATTGCCTGTGATGCGCATCACATTCTGGTTTAATGCT
TATTCAATAATAAAACTGTTTTCTTTCTCTTCTACCTTTGTGGAGAGGTT
TTCTGGGTTGGNAGGAGATTTTGTTTTTAATTATATTTC
>rnd-5_family-138#DNA/TcMar-Tigger ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
CAGTCCTTGCTTTGCACGGTTCCGATACGCACGAATTTCAGTTACCATGG
TTTAGTTAAATAACACCAGTCCTCCAACAACACGTTCAAATTTCAGTTAC
CACGGTATATTAACTGTGAGTAATTGCATAAAGTACAAACTTCACTGCTA
GCTCTTCAGTCCACAAATCACTACGTAAATAACAGATGCGCATCATGATC
AGTGACCAATCACGTCACTTCTTTTCAAAGTCTGTCGGTGATTGGTCACT
GTGCATCTGTTATTCAGTTCACGCACAGACAGCAAAGCGTGTAGTTGTGT
TGCCTCCTTGTCTCCCAGTGACAAACCCACGTGACATTTTACAAAAATGG
ATAATCGAAAGAGGGAATTGGCCAACAAAGATGAAAGTGCAGCAAAGAAA
AGTGATAACGCTGGAAATTCGAATCGAACGTAAATGGAGTTATAGAAGAA
ATAGCTGACCGTGGGAATGTTGACACTGCCGCCATTGGAGACTCTAGATA
TGCAGCCAGAGGAACTTAGTGAAGGCGAACATAATGGGAAATGGTTGTGA
CGAAAAGGATGAAGATGTCCCAGAGGAAGTGACGCCGGCAAAAANCTTCA
CATTAAAGGAACTCTCGGAGATATTTCACGACATTGAAAGTGCAAAGGAT
AAAATGTTGGAAGCTGATCCAAACTTAGAAAGGAGTATGACAATTCNCCA
AGGCATAGAAAAGATGCTCGCTCCGTATCGTAAGTTATATACAGAAGAAG
GCAAGCACTGTTCAAACTATCTCGGTAAGTTTTTACAAATAAAACACTTT
AATTCTCAATGTTTCTAATGTTTTAAATTACAGTGTACTAAATATTAGTT
TTACTATTTTTTCATTTCCCTATACATTTATAACCGACAGTAAGAGAGTT
TTTAATGTTTTGACAAAAATTTTTAAAGGTCACGGAACAATCGTAATTTT
TCCCATTGATTATTAAGATTGTCTGCACGGTCATTTTTACGGTCCCGCAC
TACTGTGCAAAGCAGTCTGCCTATATGTA
>rnd-5_family-3097#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
ATTAATTAAACAAGGAGGCCATTAGACTGAGGTGGCTCTAATGCCTTGGC
GGCCTACGTAAGCAAACCAAAACCTAAGCCTGTAAATGCCTCAAGGTTAC
GAAATCGAAACCTAAGGACAACCAATCACAAACAGCCAACTAGGCTTTCC
AAATAAGGCAGCCTTAAGCTATAGCCAATCAAATAATTTCCTTGCTTTGC
TTCCGCGTCTTCTCTGTAATAAGTCTCTCCCCTAGCTCCTGTNGGTGGAG
CGCTCCTAACCACTTCCGGTTTGGCGCTGCCCGATTCGAATCGATTTTTG
CTCAAATAAACTCTTAAAANTTTTAATATGCCTCAGTTTATCTTTTA
>rnd-5_family-442#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
TGTTAGGGGAACCACTGACCGAAACCGCCCGCCCTGGCCAGGCACGATAG
TAACCACTTGCATGAGTTATCTTACAACAGGAGGTCCTGGTAAGGAACGC
GGAACTAACAAGCTACCACCAACCGGAAGAATTCGGG
>rnd-5_family-2593#DNA/hAT-Charlie ( Recon Family Size = 32, Final Multiple Alignment Size = 28 )
ATCTACGGTTCCCAAACTGTGCGCCGAGGCGCCCCGGGGCGCCGCAGCGA
ACTCACAGGGCGCCGCGGGATATTTTAAATTTTCGAGGGAAACACAGCGA
ACTCAACATCTGTCGGACACCACGCGAACTACTAGCTCGAGGTAGTTCAC
AGTTTCAACATTAGATCGCGCTACATTCCTTTCATGACGTCATATCTTTG
CGAAGCTGGGTTTTCGGCGGTTGCTGTGATAAAAAGCAAGTACCGCGCGA
AATCAATGTGGAACGGGAAATGAGGGTGGCGGTGTCCAATCTGATTCCAA
GGTTTGAGAAGTTGTGCAGTGCCCAACAGGCGCACACATCCCATTAGTAA
GTAATTGTGGTTATTTAAGAATGAAATNAAAAAATTTTTTTTCAATTTAT
GCGTATTATTTTTTCAAACGGCTACTAAGTTGTTAGGACGTAAATACTTA
TTAAGTTGTTTGGACCTAACTACTTAATAAACGGAACTGTTAGGTATTTC
TTTTGGCCTAGGGGCACCGTGAAAAAATTACTGAGACACTAAGGGCGCCG
TGAACCGAGAAAGTTTGGGAAT
>rnd-5_family-24#LINE/L2 ( Recon Family Size = 33, Final Multiple Alignment Size = 28 )
TTTCCTGACCACACCACACTCCATTCTCTAACTGGCTTTATTTTCTTCGT
AGCACTTATCACNCTCTGAAATTACTTATTTATTTGTTTACTTGTTTATT
GTCTGTCTCCTCCACTAGANTGTAAGCTCCATGAGGGCAGGGAAGTGATG
TCTTCGTCACTGCTGCATCTCCATCACCTAGAATGCTGACCAGCACACAG
TAGGTGCTCATNAACCATTAGTAAGTGAACACATCA
>rnd-5_family-840#LINE/L2 ( Recon Family Size = 44, Final Multiple Alignment Size = 28 )
TCTCAGGATATTCCTNNTCCATATGCCCGTNGCGCTCCGTGGGTTCTNTC
AGACCCTTTNCTTATGTATTTTTCTCNTTGCCTGAACCCTCTTCCCTTCC
CTAAATCTNCTCTCCGTCTAACCAATTCCTATTCATTATTCAGGTCTCAG
TCNAAGCGTCACTTTCTCAGGAAGCCCTTTCCAGAGCCCCAGGCTAGCTN
AGGTTCCCCTGTTGTNTATACTCAGGGCACTTCCTCTATTTTAATAGTCT
AATAACATNTCGTTATTACATGCTTAATATCTCTCTTCCCCCACTAGACT
GTAAGCTCCNCGAGGGCAGGAATTACGTCTGTTTTACTCNTCTCTGTATT
TCTAACACCTAACACGTGCCTGGCACATAGTAGGTACTCAATANATGTTT
GTTGAATAGAATGAATGAAC
>rnd-5_family-4564#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
AATTAATAAACAGAAACCTCAATTAAATAGAGTTGGGAGACCAGAAGGGG
GAGCTCTCATG
>rnd-5_family-1055#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TTGACAATGTTGAATTTTACCTGAGCCCTGTGNTCCTGGAAAACAGCGAN
GTTNAAGAAATCCCCCCACCCTTTTGTGTTCCGGGAAACGGCTTACTGCA
AAGAACCACCCTTCCCCGTATGACTTGATAAGACTCACGGATGCCCCCCT
TGTTTACCTATGGCAAGGCCAGACACGGACCCTCCAAATTCCCATTCTTT
GCCTCATAAATGATTAGCTGAACTGTTTTGTCCCCACTGACCAATCGGAA
CAAAATGCTTGCTTGACCAAACTTTAGTCAGGCTTCTCTCCTCCCTNCAG
GCCCCTGAACTTTGGCCCGCCCTCAGCCTGAGCCAGCATACAGCCCCTCC
TTAACGGCTCCTCCTGAGAATAGGCTGACCNCAGGGNAAAACATTCTCTG
ATCNACTGTCCGGTCACGCCACTCTTTCTCATCCCACTTCCCCGCACCCG
GTTCTTTCTAGCCAGCCTCGCTTACTCCTCCCTATAAAGAAAAGCCCTTT
CTGCCTGACCTTTGAGACGCTTGCAGATCTTATGGTCAGAGCGTTCTCCC
TATTGCAATAGTCCCCCTCCCCCTATTGCAATAAATCTTTTCGAATAAAG
TCTCTCCTTACTAAGTCCGGATTTGTTTTTATTTGA
>rnd-5_family-2442#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TGAGGCAGGAGATAGATGGGCCCCAGGCTGAGCAGCTGGAGTTCGTCCCC
TGTGGACAGATACTCCGAGATAAAGATAATAGCAGGACGATGGAGGAGGC
TGGGCCCTGCCCAGATAAGAGATAAGAGACCACATATTCCTCATTCTCGA
AGTCAAGGAGACCTCCCCGACTACACATGCGCAGAAAGGCTCCTCGGAGG
TCAAAAAGGGAGGGGGCGCCACCCATAGTAGTGATGTCAACCTACCCATA
GGCCTCTTCGCTGGAATCCATCTTGGCTAAGAGATGCGCGCGCACACATA
CGGACTCAGAACCAGGCAAAGCAAGATGATTGGCCAAAGGAAACCCGGAA
GAAACGCCCCATATAAGTGATTCAAACTACCACGAGGGCGCGACTCTCTC
TCTGAGCCCGCCCGTGTGTCTATCCACACGTACTGTACTCTTTTTCCTCC
TAATAAAACACTTTACTTGTTTCACTACTTTCCGTCTTTGTGGGAATTCT
TTTCTGCAAAGCCGAAGGGCCAGGGCCTTGTCACTGGCCACTGGTCTAGT
GGCTAGGATTCGGCGCTCTCACCGCCGCGGCCCGACCTCGATCTCTGGCN
GGGAACCGAAATCCTGCTTCAAGCCGCTGCAGGCCGAGGCCACCCGACA
>rnd-5_family-1185#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 27 )
AGTGACGTCAGCAAGATGGCGGAATAGGAAGCCCCAGNCCTCGTTCCCCA
CGGAAACACCGANTTAACAACGATACATGGACCAAAATACCTTTGTGAGA
ACTCNAGAAACCAGTTAAGAAGTTGCAGCANCNCAGGCGAGCACAAAACC
GAGAANAGCCGCACCGAAANGGGTAGGAAANTTCGTTGCATTTGCTCACC
ATAGCCCCTCCCCTTCTAGCACAGNTCGGAGGAATCTCAACTCCTGGGGG
GGAAAGAGAAGAGTGGAACGTGCGTCCAACGTTCTGGCTTTTCAGGGGCT
GCCCGAGGGACTGGTTTCTGTCTCGCCTGACTCGGAGCGCTGACGGGAAC
AGGGTATACNTTGGATGCCGGGTGGGGCCGCTGAGAACGAAGGAAGCACN
GCGGTNCGTTACAGCACCAGGGAGACTGCAGTACCGCGGACAGACGCCAG
AGGGAGCAAGAGATTACGGGCTCCTGAGAACAGAGGCAAACCTCTCTAAC
TGGGAAATTACATGCGCAGGCCCAGAGAAGACGCATCCCCAGAAAAGGTT
TGAGAGGCCCCCAGAATCTCTAGCCAGGCTGATTGGTGAAGGTCTTCCCC
TGTACAAAGCCAGTCTACAAAGACTGGGAGAGGTGGCTGTTTTTTCAAAT
GTCCAAATCCCA
>rnd-5_family-660#LTR/ERV1 ( Recon Family Size = 28, Final Multiple Alignment Size = 26 )
TAACACTATTGCTCATAATAATCTATATCTTTGTGGGCATCAAAATAATT
GTAGCTTGCTCTGCCCGTATATGTAAGCGGGCAACTAAAACTGTCAGCAA
AGAGATGCTACAGACCCATGTCGACATCTTCCACTCTGAGAATACGGCGC
CCTATGTCAGCATGAAGAAGTTACAGAAGACGGACCTTCGCCCCTAATCC
CATAGAAATGGAATGATGTCTGACAGGGGGGANCTGTAAGCAGCTCTTTG
GCAGGAAACCGCCCTCNGCAGGAAGCCCCTTTTCTTGTCACTTTAGCAAA
GCTATATTGTCAACTAACTTTTAAACCAGGCACCCCCATGCTCTACTCAT
CTCCGGCCCAAGCACACCTTTCAAATCTTTTGATCACACAATACCTTGCC
TAACCTGTCGGTTCTTTCCGTAGATCAAAGAAGTAGAAATGAAGAATAAG
TAATTAACAGATGACCAGATCTCTTCCCTAGCTTCCCCTTCAGTAATCTC
GCGAACAAACCGCGTGAACAAGATAGCATCTAAAGGAAGATCACGAGGAG
TCGACGAGCCTGCACGCAGTGGGGGATGGCGANGAA
>rnd-5_family-1444#LTR/ERV1 ( Recon Family Size = 34, Final Multiple Alignment Size = 26 )
CAGTGGGTAATCATCAGTCAAATCCATTTNACCTGCCTTCACTGATCAAG
NTCGCTTTAANTGTTCTACAAAAGACTTGCATGTCCTCCAAGCNGCACGT
AGCCTAAACAGTAAGATGTTTGCCCAAGTTGTTTTCCAGGAACTTGGAGT
CAGCTGTGTCCAGTTCGAGCTGAGCCGGTTAAGACTGGTTGGGACCACCG
ACCCTNCAACTGGGCCTGCGCAGTGTCCGCTGAGTGACCTTTTGACGTCA
GAGGCCGAAAACTCCACCCTCAGATCACGCTAAGCGCCTCCATTTTTGAA
CGTGCAGAGGCCCGTAGCTTAGNTGCGCCTGCGCAGAACGACGATTACCG
CACCTTTTTCCAATCACCTTTCCCCACGCTCCCCACGCCTCGGACCGCCC
TGCTTCTTTATCCCATAAATACCCCGAGCCCCTCGCCTTCGGGGAGGCGG
ATCTGAGACTTGTTCTCCCGTCTCCTCGCTTGGCTGCCTCGTGAATAAAC
CCTCTCTCTGCTGCAAACCTCGGCGTTTTGGCTTGCTGCGCGTCGGGCAA
ACGAACCT
>rnd-5_family-1260#LTR/ERVL-MaLR ( Recon Family Size = 30, Final Multiple Alignment Size = 26 )
CCTGGCTGACNCAAAGTCGACCTGANATGCATGAGCCCTGCCGAGCTCAG
CCTGAAGCAGAACCGTCCAGCAGACCCACGGACGNGNAAGCAAGAATATG
CTTGTTGTTGTAAGCCACTGANTTGGTGGTTCGTTANGCAGCATTATTGC
GGCAATAGNTGANTAACGCAGAAATTGGTACCCGAAGTAGTGCTGCCATA
ACAAAAANCTAAAATATGTGACANTGGCTTCGGNGACTGGAGACAGGAAA
AACTAGAAAAATCAGCGAGGAAACTGCTATGGACTGGGAAAATGGCGATC
CATGTTATGTAGTGGCGAAACGNTTGGCAAAACTGTCGCTCGTGGTAACT
TGGAAGACAGAAAATACGCCTAACGAACTTGTGAAGATTAAGAGATGTCC
AGGGCAAAATGTTGNTAGTATNAGTTGGCTGCTNTCGGCTGTCTTTGGCA
AGGTATTACAAGAAAGAGATGAGCTCAGAAAAGAACTGGCCAGTTTGCAA
GCAGAATTTNGAGGGAATATGAAAANNCTAGGACTTGCTGGGTTGAAAAA
TAAAACAGTTTCTCNTTCCCAGCCTCNCCAGTGGTAAAGATTCTCAAAGT
AAAATTCGGCCTNANGACAAAGACCAAATCAAGGGTGTGGCTCTAAGACC
TTTTGTTAAAACANCTNTGAAAGAATTAAGATGGCGCCTANTAGATCCTC
TGANAAGAACCTANNTAGNTTAAAGGCATGGTCCCACGGANNCCTGACCC
CTAAGAAGCAACAAATAAGTCTCAAGAGGGGCACATCTCAAAAATAATCG
TGAATGTAGCTTTCACGNAATGGAGTGACNTTAAATCGATATCATAAGAA
GCCCANAATGTTTTTGAGGAAGTTGTATTGGATNAAGCGTCACCAACTCG
GACTGAAAGTGATTGAGGTGTAACAAAAAGACCTCTGGTCCCCAANTTTC
TTAGGAAGCAGGCTGAAAAAGCTGCTATAAGAGAGCCTATTCTCCAACGC
CCTCTTCAGATGTGGCCAAGGAGGATACGGAAAAGGAAGGACNTCCCGGA
GGGCGGAGCCAAGGAACAGTGGACTAGGGAGCCACTCCCAGAGAGCAGAA
CCAGGGCCTAATCAAGGAACAATCCTCACTCCCGGTAGGGGAGCCTATAC
ACTTTCCCAGCAGNATTTCAGAATTGCCATGGACCAGTGACTGCCGTGTG
TAGCTTCCCCTTTCTGAATNCGAGTATTTATTACGATTGTNCTGTCCCTA
TTTTACCACTGTATATGGGGGAGGGTGCGGAGGTGGNGGGANTCAGATAA
CGTGTCTTTTCGTTCANANGTCNCCAGAGCGAGAGGAGATGCATCTTACA
AACCACTAAACGGTTATAATGTAGACATTA
>rnd-5_family-497#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 26 )
GGTAAGATGGAGTAAGCACACTCCACCCTGTCTCTCCCACTGAATGCAGC
TATAAAACCTGGACAGAATGCACGGAGCAGCTATCTGAGGACTCTGAAAA
GTAATAGTAGCAGGCGGATTGGGAAGAAGACCAGAATTCGAAGTACCACC
GAACTAGCGGTGAGTTTCCCGTTTTTCCCTCCGGTATCCCCGGCCTGGAC
TCAAGGCAGCCCGAAACCCGGAAGTGGGCACCGGGGAGAAGAGAAAGACT
CCAAGAGAAGCCCTCTNGTTCTGGCTCGAGGGCCGGAAAAGGGAACTCTA
AGTCAGAGGGGGTGGAGGAAACCTCGTTTTCCTCTTCTCCGTTCTCTCGC
GCCCCAGCCCCCAGGCAATCCCAGGTGGTGGCAGTGGCGGCAGCACACAG
CGGCTGCGGGGGCCCAGGCACCTAAAACTCTGAGGGAGGGGAACCTTCCT
CTCTGACCGGAGGAGCTGTGGTCCCAAGAGNGTGGGGNGAATCCCGCTGC
TTTTTTCTCTGTCTTCCTGCCGCTTGGCCCCGGACGCGGGCACAGTCACG
GGAAGTGCGCAGCAGAGCAGGGTAACTAAAGCCCCAGCTTTCTGGCCGGA
GGACCGAAAAGCCCCAGGGAACCAGAAAGTGCGGAGAAGATCACAGAGAG
GTGCAAAGCAGCCCCTGAGGGCTCACCCCCAAGCTGCGCATGCGTGGANC
TGACCCTAAGCAGCACANCAAAGACTTTGAGAACTGAACTGCGGAAAAGA
ACCACCGCCCAAGTCCCAGACTGGCCACTGGGTGGCGCATACGCGGGACA
GATCCGAATAGCACTGCAAAGGCTTTGAAACTGAACTGACACTGGAACCA
CGACCCACAGAAGGCTGGGTGGGACTTGCGGCCTGAACCTAACCGGGTCA
ACTGCCTGCTAAAACAAAAATACAACATTCTCCGTAGGATTTAAACAANA
CTCAGAGTCTCACAATAATATTAACAATGTCCGGGATANAGCTAGCACTA
CTCAGCNTATT
>rnd-5_family-2657#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
AACAAATATTGAACTCCGGTTAATGATACGCATGCTGTTTATNAAGTGTA
CTGACGTCTGCAATTTACTTTGAAATGCATCAAAAAAAAGATGGATTGAT
GGATGGATAGAGGGATGGATGATGGATAGATATGTGATAAAGCAAGTATA
GTAAAATGTTAATGGTAGAATCTAGGTGGTGGGTATACGGGTGTTCACTT
GTAAAATTNTTTCAACTTTNCTGTATGTTTGAAAATTTTCATAATAAATG
TTAA
>rnd-5_family-102#LINE/L1 ( Recon Family Size = 29, Final Multiple Alignment Size = 25 )
AANGGAATATTNAAGAGAGTTTAGGCAGAAAGANANTGATCCCNGATGGA
AGCGCAGAAATGAAGGAATAAAGAGNAANGGAAAGGGTAAATACGTGGGT
AAATCTAAATGAATATTGACTATAAAACAATAATAATGTTTTATGGGGTT
TAAAAATATGTAGAATTAAAATACACGACAACAATAGCATANGANNCAGG
GAGAAATGGTAAGTTAAAGTGTTCCAAGGTCCTTGCATTGTCTGGGAAAT
GGTAAAAGTACTAATTTATGTTAGACTTAATAAGTCAAGGATGCATGTTG
TAATCTCTAGGGTAACCACTAAAAGAATAGTAAAANAATGTATAACTAAC
AAGTTAACAGAGGGAAAAAGAATGGAATGATAAAAAACTGACTAATCCAA
AAGAAGGCAAGAAAGGAGAGAAAAAGGAACATAGAANGGTAAAAATAGAA
AGAAATAGTAAGATGGTAGATTTAAACCAGTAATTACATTAAATGTAAAC
GGACTAAAT
>rnd-5_family-565#DNA/hAT-Charlie ( Recon Family Size = 33, Final Multiple Alignment Size = 25 )
CTACTTGCTCCTCTCCTTTTTAAACAGAGAGAGAGCAGGCCTCAGGCTCA
GTGCAAAGGCAGGCAACAATTAGCTGGAATTTAAATTGTTTCGTTTTAAT
ACTACATNTTTTTTGGGTTACCTTCTATTTATGGCAAGTGATACTGGTTT
TCCATTTACGGNAGTGATATAAAGTTTCCTTTTAAAATAAATTAAGTAAA
AAAGTGAGTTTGTAAAGAAAAATATTAAGTAAATATAGTAAAATGGTGTC
GGATGTGGCAAAAATCGTGAAGGTGGGATA
>rnd-5_family-236#DNA/TcMar-Tigger ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
GCCGTCACCGTGAATGGGGTTTGGAAGAANCTTTGCCCGCAGTTTGTTCA
TGATTTTCGTGGATTTGAGAAGGTGGATGAGGAGTCCAAAGAGGTCTTCA
GCAACTTAGTGACCCTCAGTGAGAAGCTGGAGCTAGATCTGCAAGAGGAC
GACTTCATTGAACTCCTTGCTGTGCAACACGAGGAGCTTACTAATGAAGA
CCTGATGGAATTGGAGGCCCAGAGAAAGGACGAAGAGAGACAAGAGGAAG
AAGAAGTAACTGAAGAACCGAAGAGATTCACGACGCAGGAAATGGCAAGG
GGATTTTCTTTATTTGAGGAGGCACTGTTAGTTTTTGAGGCACAGGACCC
GAACGTAGAACGGTACACGAAGGTTGCAGCAGCCGTTCAGAATGCAATCC
AGTGCTACCGTGTCATCTATGATGAGAAAAAAAGAGCTACTACCCAGA
>rnd-5_family-1537#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
ACGTACACGCGGGGGTTGGGCCAGGCCAGAGTCTGAGCTGCCTCCATAGC
TCCCACAGCGGGTCCAGGTGCACGACTACTGCAGTCCTGGGACCTGACTT
CAGTGGATCTGCGCCGGTGGCCTNGTGAAAACAATGCCTGAGAGACACCA
GGGCCAATTGCCGGCATACCCACGGTTAAGGCGGGGCCGAGAGCAGTGCC
AACAACAGTGTACTTTGTGAGCCCGCACAACGGGTGAAAGGCGACACAAC
AGAGCACACTCACAGGTGAACAGCTCCAGAGGAGGAATACTCAGTGGCTT
CTCTCCCAGCGGGAGTGCTCCAATCCCACCTACCTCACACCGCAGATCAG
AAACACAGCTAAGAAACAGATCTGGGGGCCTCTACTCCAACAACTAGGGA
GCAGACCCCGCCCCTGACAGGGCAGTGACAACCACAGAGCAAAGGGGAGG
CCCCGCTCAATATCCAGTGCAGGCTCTGGTCACCACAACACCAGTCACAC
CCCCTATCAAGGGGATAACGGCCAGCATACACTGAGGAAAGAGGCGGCAG
NCATCCATACTAAAAACAGCCCTCGCACCAAAAAATATTAAATAAAATAT
ATTAGACCCACGCAGGCTACACAGGGACGTTCCCACATAAAAATAGCCCT
CCA
>rnd-5_family-114#LTR/ERV1 ( Recon Family Size = 29, Final Multiple Alignment Size = 24 )
TATGTGTGTTATAGATGTGTGGTATTTTCTACCTCCGGATGGTATTGCCA
AAATTAATTTGTAAAAGAGCTCTATTTAATTGGCTTAAAAAAATAAGCGC
TATATAAATTAAATATTTAAACTCTCAGAAATATAGAAACTAACCCAAAT
GTTTTTCAAGTTCACGTGATCTGGGATAATCTTCGGTAAATAAAAGCTAG
TTTAAGTTTGTTGGTTTAATTAAAATAGGCATGTCTTTAGAGTTATCAAC
ATTAAATATAATACTTTTATTCTACCTGGGTTTACTAGAAATCAAATAAG
TTCATNTTATCTCCGTTATAAAGTTTGTCAGCAAGAAAAATAACTTGGTA
TGATAAAATTTTCATGAGTAATCTAAANATAANTATTAAAAGTGATTAAA
TAGANGTAAATGAGATAAGCGTTTNGGCGAACTCTTTAGGAATAACTATG
TTTTGCGGNATGTCCACTTAAATAGTNTCCCCAGATCTTTTTGGTAACTT
GAAACCTTAGAGTTTTGCTAAGTTAAATTAAGCGATGAATATTATTNACT
GTCTGGATCATTTCCATATAAATACTGGAACATTAATTGCTGAGCAGGCC
TAAGTTTACCTACTTTTGCTTCTTATTACGAGAAACTTGAGTTTATTAGT
ANACATGGTCTTATGCCACATTGGAAAATTTATGCTGCGAGGAAATGTAC
GCTTCTAGANGTTATGAAATGTATTCATAAATTTGCCAGTCTACAGAACG
CTGGTGTGANAGACCAGTTCACAATTGCTTGCTTCTTAGTTTTCGCTAGA
AATTAAGGTTTCTAANGGTTAAGAATTCTAATCAATATATGCGATTAAAA
CTACTAGAAANAATAAGGGTGAAAGGAAACAACTGTGTATGAAAAGTAGG
TAAGGAAAGTAAAATGACTGATTGTTCCAAAATGAGAAAGGGAAAAAAAA
AATAGGACAAAATTGTAGAAGGTTTGTGGAAAAGGAACCTTGGAAAAGAA
TTTTATGCGTGGTCAGGCTGGCTAAGATTGGAATGAATTTATTTAAGTTT
AAAAAATGAGTTTTAATATCAAAAGTACACTGGTACAAAACTAGAATTGG
TTTTCTCTGTTAAAAGGACAAAGTTTTATTGGACTNTTGGTCTGCTCTTG
ATAANAGATTGTGAAAGTTTTCTTTACCTTTTAAGTAATCTGCCTGGAAA
GCAAAGATTTTGTGTCTTACCAATAATTTACTGTGCTTCACGTTGTCTTT
ATCAGGTCTTTGATTACTTAAGAAAACCCAGTCTTCTCAATATTAAAAGA
GCTAAGTTTTGCTCACAACTGTGTAACCTTCTGTATTTGCCTTTGAAATC
TCTATTGTCACTTTGGTTAAATGGATATTTTTGACAAACTTCCCCCAAAA
TCAAATTCTAAATGAAGTCTTTTTGACCTCAAACTAACTTTGGGATTTTC
CAGAGGGCCCCTGGAANATCTCAAAGGATTTGTTCTCTCTCCTTATAAAA
AGAGAGATGTTAAACTAATTAGGCTTATTTGATATGTTAAATTACATGGG
AAGCATTGTCAAATAAGTGATAATAAGCCTTCTTTATATTGTATGGGTAN
ATGTTATTAATATAAGTGTTCCAGAAATTATATGAAATTCCTAAATNTNG
ATATGTCCTGGTAAATGTTATCAGTCATAATTCCAGTTATTATCTTAAAA
TGCTGTATGTCACAGAAATAANCAAATTTCTCGGCATCAATGAATTCTCA
TCAGATCTTTAACCGTGGGCATTTTAAAGTCTTTTGTAATTTACAGACAG
TTACTGTTTTACTCTGATGCTTTTGCAAAAGTGAGATTCACGGAAAGGAC
CNTACCAAGTACTCTTGACCACCGACACCGCTGCCGAATTACAAGGCGTT
AAAACTTGGGTGCGTATTTCGCAACTGAAGAAGGCTCCACCTGACATCTG
TCCTGTGCGAACACTGGAGACCTCAAATCAAATTGACTAGGAAGAGAAGT
AGCCGACGTCAGGTAGACTGCTTCCTCCCGAGACGNTNGATCAAGAATCC
ATTCTTTACGAANCATTAAAGGTCTTTATGCTTCTTTTGTTTCCTTTGCT
GTGCCCTGGCCTGGAAAGATAACGCCATTGTTCACATNTCCCAGGCCATT
GCNAAGGGGGGTAACCTCTCAAATGACTGCTGGATTTGCCATCNGAAACT
CCGACCTNTCCATAATGCTGGAGANCCCCT
>rnd-5_family-139#Unknown ( Recon Family Size = 27, Final Multiple Alignment Size = 24 )
GCATAATAAATGATGTATTCTCTGATATCGGAGTTCTGGTGTTTCTATTA
GTGTATGTGTGTGTATGCATGTGTGTGTATGTGTGTATATACACACACAC
ACACACACACAC
>rnd-5_family-761#LTR/ERVL ( Recon Family Size = 26, Final Multiple Alignment Size = 24 )
AGCATGCTTCCCACTGCCCTTCTNNGCTCTCCCCTGCATCGCAGGGGCTA
GAAGCCTGGAAACTACATTTCCCAGANTTCCCGCCANCAGGGTTCTGGTT
TAGANTCCGCCAATGAGAGGCACTCGCGCGAGATTTGGAAGGTGGAAGAG
AAGCCACCGTTATTGCTCTGGCGGCAGCCGGATGCAGGGTCTTCGGCAGA
CAGGGACTGAGGTTTTGCCAGCGGCTTCCGGGCGTCCTCCTGNAAATCAC
CTNCTTCGGCGCTGCAGGCAGCCGAGACATCAGTGGCGGTTCCCTGNGAT
TCCTGCGCTTCCTGATTTCCTGAACCTAGCGGCGCCTTCTCCGGCCTTTC
TTGCCTTCCAATGNTTTGTAANTCCCTGTATTAAATCCCTTCCTGCTTGA
AATACCTAGAGTAGTTTCTGTTTTCCTGACCA
>rnd-5_family-4921#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
ATAATAAACAGAAACCTCAATTAAATGGAGTCGGGAGGCCAGAAGGGGAG
CTCTCACA
>rnd-5_family-1552#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
ATTGTCATAAATCCCCTCCCCGGGAGTTTCATCAACCAGGGAAGATTGAC
TCTTATCACAGAAGAGACTAGAAGTCGACACCACACCCAGACAGACNTTG
TCACAAACTATCATATCTCCCATCTATTCTTCTAAGGGCCCATTCATCTT
TCCTAAAAGTCATTTGCTCTCCCCTAAGNGGCCTACATCCCCCTCCCCTT
CCCTATTAAGATGGTATNTAAGCCTGAATTCTAAGCCANCTCTGGGAGTT
ACTCATTTTTCCCTGGGTANCTCCCATGTATACATGAGGTATACATGTTA
ATAAACTTCTGTTTGTTTTTTCTCTTGTTAATCTGTCTTTTATTACAGGG
GTCTCAGCTAAGAACTCAGAAGGGTAGAGGGAAAATTATTTTTCCTCC
>rnd-5_family-562#SINE/MIR ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
GGCTTTCCNGGTACCAGTAAATGATGATGACAATAGCTTACAGTGTTGAA
CACGAACTCTGTGCTGTNTCACANGAATTATCTCATTTAATCCTTATAAT
AGCCGTAAGACTTGCTNTCTCCCAGTTTACAGATGAGGAAACAGAGGGTT
TAGTCTTAGTAGCTAACCTGCAGGCGGCAAAGGGAAGCGGAGAGAGCATT
GGACTCAGAGNCAAGAGACCGGGGTCCAAGTCCCACCTGAGTGACCTCAG
TTACTCATCCTCTCTGAGCCTCAGTTTTCTCATCTGTAAAATGGGGTGAG
AATACACACTTCCTGTTCTGAGGATNAATGAAATTCAAGGATGTGAAAAT
ANCTCTGGCTATCCAGAAGGGGCCCTGGNACGGAGCAGTGTTCTATCCAG
TGGGAGATCGTGGGG
>rnd-5_family-2018#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
CCTTTGTCTCTCCCCTTCAATCTACAACCAGTAAAACATCCATAACTCAA
CAAAGGTGCCTCTGCCCAACACACCAGGACGCCGGAGAATTCCACACATC
TGTACATCTAAAGGTGGGTGGACTGGAACACATAGAGGAGGCGGAACCGG
GGGAACAGCGGAGGCGGTGCCTGCGATCCCGGCCCCCCGGCCGCGGCAGC
TGAGCCCGCAGCCCCAGAGAACCCAGTAGCAGCAGGGGAGGCAGCGCACA
CGACTCCGGCCTCCCGGCCACAGCGGCGCCCGCGGCCACAGGTAACCGGG
CAGCAGTGGCAGCGGGGCCCGCGACCCCGTCCCTCCAGCCGCGGAGGCGC
CCGCGACTCCGGCCCCCCACCCCCCGCCCCAGCGGCGGCGCCCGCGAACC
TGACAACNCCAGACACGGCAGAGGCGCCCGCGACCCCGGCTCCCCTCCTC
CCCCCGCGGCGGCAGAGCCTGCGACTCAGGNGACCCCAGACGCGGCGGAG
GCGCCCGCCATCCCAGTGCCCCAGGTGGCGACGCCAGCGACAGCGGCAGC
AGCAAGGCACCAGCGACCCCGGAGGCACAAGCAGCGACAACGAGGGCACC
GGGCGACACCTCTGACAGAGGCGGTGGAGGGTGGAAAGTGCCGATTCTCA
AATATAACCAGAGGCAGCTCAGGTAAGAGAAACCAAAAACTTGTGCTATA
GCGCCACCTACTGGAAAACAAAAGAAAGGCCTCTAATTNCTAACCTGTTG
AATCGTTAGAATCAAGTAAAAAAAAAAAAAAGCTTTACCTAAAGAAAGGT
GTTCGCTACTTCAAATGCGCCGGCAGAGGAACAACTCATCAAGCACCATG
AAGAACCACGGTAACGCNGTATCACAAAAAGAAAATGACAATTCTCCAGA
AACCAAACTTAAAGTCACGGAATATTGTGATCTAACTGATAGAGAATTCA
AAATAGCTGTCATGAAGAAACTCAACGAGCTACAAGAAAACTCAGAAAGG
CAGTTCAGTGAGCTCAGGAATAAAATTAATGAACAGAAGGAATACTTTAC
CAAAGAGATTGAAACTCTAAAAATGAACCAAACAGAAATTCTGGANCTGA
AGAACTCAGTAAACGAGATGAAGAATGCATTAGAAAGCACTGGAAATAGA
GCAGACCATATGGAAGAGAGAATTAGCGAGCTCGAAGACAGAAATCTAGA
AATGATACAGGTAGAAGAGAAATAGNATTAAGAATTTTAAAAGAGGAAAT
TCTACGAGANCTATCTGACTCANTNAGGAAGGGCANCGTTAGGGCAATGG
GTATCCCAGNAGGGNAANAGANGGAGAAGGGAGNAGANGGNTTATTTAAA
GAAA
>rnd-5_family-579#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 23 )
CAAATGAAGAAATAAGACAANTATTAACTCCAGGGAAAACAAAAAGTTGT
GCAGGAAAGAAGAAAAGTAATCATAGNACACNATANGGNTCAGCTGTGAA
TAGTATACATAGTCATAACAATGTAAACACTGAATATTGATCTAACCAAA
ATTNCGATATAACTATATTGGAGATCGAGGATGAGAAGAGAGGGACAATG
AAGGGGGTAAGGTGAAANAANACTAAATCCTCATCTTCCGTAGCAGGAAG
TCAATAGATAATGCCTAAAACTGAAAAATCAAGAAGTAGCAATATAAGCA
TGTTATTTAGAGATACGGAGGTAAATTACNGCCCCAAAAGAATAAACCAC
TGGAGAGTTAGATTTAGTAGTCTTTG
>rnd-5_family-1110#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
CACTTGGCGGCCCGTCCCAGGGACTCGCCCGAGACCTGGGACGTGACCAT
CCTCTCGCGCCCCATTTTCCTGCA
>rnd-5_family-889#LINE/L2 ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
TGGGGCGGTGCANAGGCCAGATTATGAAGGNCTTGTGGGNCACGTTGAAA
AGTTTGGACTTTATCCTGAGGCAATGGGAAGCCACTGAAGGTTTTTTAAG
CAGGGGAGTGACATGATCAGATTTGTGTTTTAGAAAGATCNCTCTG
>rnd-5_family-391#Simple_repeat ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
ACTACTGCTACTACTACTGCTACTACTAGTAGTCCAGTGCATTGNAAATA
CTACTACTATTACTACTNCTCCTGCTGCTGCTACTACTNCCACTACTANT
ATCAATACTACTAGCCCNGTGCATGGCAAATCTACTACTACTACTGCTAT
TGCTGCTACTGCTACTACTACTACTGGCCCACTGCAGGGCAAATCTGCTG
CTACTACTACTGCTGCTGCCACTTCTACTGCTACTACTACTACTACTACT
ACTAGCCCANTGCATGGCAAATACTACTACTATTACCGCTACTGCTGCTA
CTNCTACTACTGCTGCTACTACTACTGCTGCTGCTACTTGTACTATTACT
AGCGCAGTGCATGGAATATACTACTATTACTACTNCTATGTGCTGCTGCT
ACTACTGCTACTACTACTGCTACTACTAGTAGTCCAGTGCATGGCAAATA
CCACTACTACTACTACTACTACTGCTGCTGCTACTNCTGCTACTACTACT
GCTACT
>rnd-5_family-11#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 22 )
ACACCAAAAACAATGGGAACTACAAACCTGCAGCCTGCGAAAAGGAGACC
CCAAACACAGTAAGTTAAGCAAAATGAGAAGACAGAGAAACACACAGCAG
ATGAAGGAGCAAGGTAAAAACCCACCAGACCNAACAAATGAAGAGGAAAT
AGGCAGTCTACCTGAAAAAGAATTCAGAGTAATGATAGTAAAGATGATCC
AAAATCTTGGAAATAGAATGGAGAAAATACAAGAAACGTTTAACAAGGAC
CTAGAAGAACTAAAGAGNAAACAAACAGTGATGAACAACACAATAAATGA
AATTAAAAATTCTCTAGAAGGGATCAATAGCAGAATAACTGAGGCAGAAG
AACGGATAAGTGACCTGGAAGATAAAATAGTGGAAATAACTACCGCAGAG
CAGAATAAAGAAAAAAGAATGAAAAGAANTGAGGACAGNCTCAGAGACCT
CTGGGACAACATTAAACGCACCAACATTCGAATTATAGGGGTCCCAGAAG
AAGAAGAGAAAAAGAAAGGNACTGAGAAAATATTTGAAGAGATTATAGTT
GAAAACTTCCCTAATATGGGAAAGGAAATAGTCAATCAAGTCCAGGAAGC
ACAGAGAGTCCCATACAGGATAAATCCAAGGAGAAACACGCCAAGACACA
TATTAATCAAACTATCAAAAATTAAANACAAAGAAAAAATATTAAAAGCA
GCAAGGGAAAAACAACAAATAACATACAAGGGAATCCCCATAAGGTTAAC
AGCTGATCTTTCAGCAGAAACTCTGCAAGCCAGAAGGGAGTGGCAGGACA
TATTTAAAGTGATGAAAGGGAAAAACCTACAACCAAGATTACTCTACCCA
GCAAGGATCTCATTCAGATTCGACGGAGAAATTAAAACCTTTACAGANAA
GCAAAAGCTAAGAGAATTCAGCACCACCAAACCAGCTTTACAACAAATGC
TAAAGGAACTTCTCTAGGCAGGAAACACAAGAGAAGGAAAAGACCTACAA
TAACAAANCCAAAACAATTAAGAAAATGGNAATAGGAACATACATATCGA
TAATTACCTTAAATGTAAATGGACTAAATGCTCCNACCAAAAGACACAGA
CTGGCTGAATGGATACAAAAACAAGACCCATATATATGCTGTCTACAAGA
GACCCACTTCAGACCTAGGNACACATACAGACTGAAAGTGAGGGGATGGA
AAAAGATATTCCATGCAAACGGAAACCAAAAGAAAGCTGGAGTAGCAATT
CTCATATCAGACAAAATAGACTTTAAAATAAAGACTATTACAAGAGACAA
AGAAGGACACTACATAATGATCAAGGGATCAATCCAAGAAGAAGATATAA
CAATTGTAAATATTTATGCACCCAACATAGGAGCACCTCAATACATAAGG
CAAATACTAACAGCCATAAAAGGGGAAATCGACAGTAACACANTAATAGT
AGGGGACTTTAACACCCCACTTTCACCAATGGACAGATCATCCAAAATGA
AAATAAATAAGGAAACACAAGCTTTAAATGATACATTAAACAAGATGGAC
TTAATTGATATTTATAGGACATTCCATCCAAAAACAACAGAATACACGTT
TTTCTCAAGTGCTCATGGAACATTCTCCAGGATAGATCATATCTTGGGTC
ACAAATCAAGCCTTGGTAAATTTAAGAAAATTGAAATCGTATCAAGTATC
TTTTCCGACCACAACGCCATGAGACTAGATATCAGTTACAGGAAAAAATC
TGTAAAAAATACAAACACGTGGAGGCTAAACAATACACTACTTAATAACC
AAGNGATCACTGAAGAAATCAAAGAGGAAATCAAAAAATACCTAGAAACA
AATGACAATGGAGACACGACGACCCAAAACCTATGGGATGCAGCAAAAGC
AGTTCTAAGAGGGAAGTTTATAGCAATACAATTCTACCTTANNAGACAGG
AAGCNCNTNGCAATAAACGACCTAACCTTGCACCTNAAGNAACTAGAGAA
AGAAGAACNNNAAATCCTGAAAGTTATGCANCAAGGAANTAGAANATAGA
ACNNAGNCCAGAGTTAGTAGANGAGAAAGAAATGACGGAGATGATAGNAA
ANNTCAATGAAACTAAGAGCTGGTTCNTTGAGAAGATAAACNAGACTGAC
AAACCNTTAGCCAGACTCACCAANAAAAAGAGGNAGAGGGCTCAAATCAG
AGAATCAAATGAAAAAGGNGGATTACAACTGACACTACAGAAATACAAAA
GATATGAGAGANTACTATAAATAACTNTACGCCAATAAANTGGACAATCT
AGAAGAAATGGACAAATTCTTAGAAANACACAACCTNCCAAGACTGAATC
AGGAAGATATAGAAAATCTGAANAGACTTACAAGTATGAAATTGAATCTG
TAATTAAAAACNTTCCAANAAATGAAAGTCCAGGACCAGATGGCTTCACC
GGCGAATTCTANCAAACATTTAAAGAAGANNTAACACCTATNCTCTCAAA
CTCTTCCAAAANATAGAAGAGGGAGGAACGCTCCCAANTTCNTTCTACGA
GGCCAACATNACCNTGATACCAAAACCAGACAAAGACGTCACAAAAAAGG
AAAATTACAGGCCAATATCACTGATGAACATAGATGCAAAAATCCTTAAA
ATATTANCAAACNAAATNAAACAGCACATTAAAAGGATCATACATCATGA
CCAAGTGNGGTTTATTCCAGGTATNCAAGGATTCTTCAACTTATACGCTT
AAAAATCAACACATTTCAACGTGAGACACCATATTAACAGANTNANGGAG
AAANNCCNTGCGATCNCNTCAATAGATGCGAGAGNAACNTCTCGACAAAA
CTCAACACCGNTTTATTATAAAAACCCCGCAGAAAGTAGGCATAGAGGGA
ATTTTTCTCAACATAATAAATGCCATAAATGACAAACGCACAGCAACATC
GTTCTCAATGGTGAAAAACTGAAANCATTTCCTCTAAGATCAGGAACGAG
ACAAGGNTGCCCACTCTCACCACTNTTATTCAACATAGTTTTGGAAGTTT
TAGCCACAGCAATCAGAGNAGAAAAGGAAATAAAAGGAATNTAAATCGGA
AAAGAAGTAGTAAAGCTTTCACTGTTTGCGATGACATGATANTATANANA
GAGAATCCTAAAGATGCTATCAGAAAACTACGGAGCTAATCAATGAATTT
GGNAAGCAGCAGGATACAAAATTAATGCGCAGAAATCTCTTGCATTCCTA
TACACTAAGGACGAAAAATCCGAAAATGAAATCAGGAAAACACTCCCATT
TACGACCGTAACAAAAAGAATAAAATATCTAGGAATAAACCTACCTAAGG
AGACAAAAGACCTGTATGCAGAAAACTATAAGACACCGATAAAAGAAATT
AAAGACGATACAAACAGATGGAGAAATATACCATGTTCTTGGATTGGAAG
AATCAACATTGTGAAAATGACTTACTACCCAAAGCGATCTATTGATTCGA
TGNAATCCCTATCAAACTACCATGGCATTTTTCACAGAACTAGAACGAAA
AATTTCACAATTTGTATGGAAACGAAAAAGACCCCAAATGCCAAAACAAT
CTTGAGAAGAAAAACGGAGCTGNAGGAATCAGGCTCCTNGACTTCAGACT
ATACTACAAAGCTACAGTAATCAAAACAGTATGGTACTGGCGCAAGAACA
GAAATATAGATCAAAGGAACGGGATAGAAAGCCCAGAGATAAACCCACGC
ACATATGGNCACCTTATCTTTGNTAAAGGAGGCAGGAATATACAGTGGAG
AAAGNACAGCCTCTTCAATAAGTGGTGCTGGGAAAACTGGACAGCTACAT
GTAAAAGTATGAAATTAGANCACTCCCTAACACCATACACAAAAATNAGC
TCAAAATGGATTAAAGACCTAAATNTAAGGCCAGANACTATNAAACCCCT
AGAGGAAAACATAGGCAGAGCACNCTATGNCACNAATCACAGCAAGATCC
TTTTTGACCCACCTCNTAGAGAAATGNAAGTAAAAACAGAAATAAACAAA
TGGGACCTAATGAAACTTNAAAGCTTTTGNANAGCANAGGAAACCATAAA
NAAGACNAAAAGGCNACCCTCAGAATGNGAGAAAANNATTTGCNAACGAA
GCAACTGACNAAGAATTAATCTCCAAAATNTACAAGCAGCTCATGCAGCT
CAATNNCAGAAAAANAAGCAACGCAATCCNAAAATGGNCGGAAGACCTAA
ATAGACATTTCTCCAAAGAANANATACAGACTGCCAACAAACACATGAAA
GGATGCTCAACATCACTAATCATTNGAGNAATGCAAATCAAAANCACAGT
GAGGTGTCACCTCACACCANTCAGAATGGCCATCNTCAAAAAATCTANAA
NCAATAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACNCTCTTGCACTGC
TGGTGGNAATGTGAATTGGTACAGCCACCGTGGNGAACAGTGTGGAGGTT
CCTTAAAAAACTANAAANAGAACTACCATATGACCCAGCAATCCCACTAC
TGGGCATATATCCTGAGAAAAGCGAAATTCAAAAAGAGNCATGTACGAAN
ATGTTCATTGCAGCTCTATTTNNAATAGCCNGGANATGGAANCAACCTAA
NTGCCCGNCANCCGATGAATGGATAAAGAAGATGTGGCACGTATATACAA
TGGAATATTACTCAGCCATACAAAGAAACGAAATTGAGCTATNTGTAGTG
AGGTGGATGGACNTAGANCCTGTCATACAGAGTGAAGTAAGTCAGAAAGA
GAAAGACAAATACGTATGCTAACACATATATATGGAATCTAAGAAAAAAG
TGTCATGAAGAACCTAGGGGCAAGACGGGAATAAAGACGCAGACCTACTA
GAGAATGGACTTGAGGATACGGGGAGGGGGAAGGGTAAGCTGNGACAAAG
TGAGAGAGTNGCATGNACATATATACACTACCAAACGTAAAGTAGATAGC
TAGCGGGAAGCAGCCGCATAGCACAGGGAGATCAGCTCGGTGCTTTGTGA
CCACCTAGAGGGGTGGGATAGGGAGGGTGGGAGGGAGGGAGACGCAAGAG
GGAAGAGATATGGGAACATATGTATATGTATAACTGATTCACTTTGTTAT
AAAGCAGAAACTAACACACCATTGTAAAGCAATTATACTCCAATAAAGAT
GTTAAAAAAAAAAGAANAGAGGGATAAAGGTTTAAAAAAAANATGCGGGC
GACTTCCCTGGTGGCGCAGTGNTTGAGAGTCCGCCTGCCGATGCAGGGGA
CACGGGTTCGATCCCCGGTCCGGGAAGATCCCACGTGCCGCGGAGCGGCC
GGGCCCGTGAACCACGGCCGCTGAGCCTGCGCGTCCGGAGCCTGTGCTCC
GCAACGGGAGAGGCCACGGCAGTGAGAGGCCCGCGTACCGCAAAAAGTGT
AGCCACTGCAATAATAAGTCTGTACGCTGCAACGAAGAGTAGCCCCCGCT
CGCCACAACTAGAGAAACCCTGCACACAACAACGAAGACCTAACACAGCC
AATAAATAAATAAATAAATAAAAGAAAATTTTAAAAAATAAAAAAATAAA
CACACTTGAAGAGGTTTCACTGAGGAG
>rnd-5_family-1467#DNA/TcMar-Tigger ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
GTTTACGATCNGGACCGCCCGTATNTATAAANCTGCTAACCCCCAAGCCT
TGAAGGGAAGGGATAAACACCAGCCGCCAGTCTTCTGATTGTACAAAAAG
GAGGCCTGGACAACGAGAACNCTTTTTCTGGATTGGTTCCATCGAGGCTT
TGTCCCTGAAGTCAGGAAGCACCTTNCCAGTAAGGGAATGCCTTTNAAGG
TCCTTTTGATATTGNACNACGNCCCTGGCCACCCAGAACCCCGTGGGTTC
AACACCGAAGGCGAGCTGTNTGAGTGGTCTACTTGCCCCCAAACACAACG
TCTCTAATTCAGCCTNCAGGNCGGGGGGCGGTCATAGAGNCCTTTAAGGC
TCATTACACACGGTACTCTACGGAAAGGATCGTCAACGCTATGGAAGAGA
ACCCCGACAGAGAACATCATGAATGTCTGGAAGGATTACGCCACTGAAGA
TGCCATCGTTGTTATAGAAAAAGCCGTGAAAGCCATCAAGCCCNAAACAA
TAAATTCCTGCTGGAGAAAACTGTGTCCAGATGTTGTGCGTGACTTCACG
GGATTTACGACAGAGCCAATCAAGGAAATCACGAAAGAGATTGTGGATAT
GGCAAAGAAAGGTGGGGGAGTGAAGGGTTTCAAGACANAGATCTTGGAGA
AATTCAAGAGCTAATAGACACCACACCGGAGGAATTAACAGAAGACGACT
TGATGGAGATGAGTGCTTCTGAACCAGTGCCAGACGATGAGGAAGAAGAC
GTAGAAGAAGCAGTGCCAGAAAACAAACTGACATTAGACAATCTGGCAGA
AGNGTTCTGATTATTCAAGACTGCTTTTGACTTCTTTTACGACATGGACC
CTTCTATGATACGGGCACTGAAACTAAAGCAAACGGTGGAAGAAGGATTG
GTACCGTATAGAAACATTTTTAGAGAAACGAAAAAGCAAAAAAAGTCAGA
CAGAAATTACGATGTATTTCCGTAAAGTTACACTGAGTGTGCCTGCCTCT
CCTGCCTCCCCTTCCACCTCCTCCACCNCTTCCACCTCTGCCACCCTGAG
ACAGCAAGACCAACCCCTCCTCTTCCTCCTCCTCCTCAGCCTACTCAACG
TGAAGACGNCGAGGATGAAGACCTTTATGACGATCCACTTCCACTTAATG
AATAGTAAATAATCATCATGCCGTACAGTTAATAAACTTATCTGTTGTGT
ATGTGTGTGTGTCTTCGTGTGAAAATCTAATAACTGTACGGCAAGAACCG
TATGAGACGTTTTTGTGTCATCATCATCATCGCCTAAGTNTTCGTCGTGT
AGAACATCGTGTGCAAGACTTGTATTGAAGTGGACAGCCTATCCTTACAT
AGGCATAAGGTGAGTGATATTTAATATAAAATTAATAATGTGTTAGTTTT
CTTACTGTTTTATAACTTTGCTTTCAAAGAATTACATTACCGTACAGTAT
GCCTCTCTCTCATAATTGGAGAAACTGCGTATCAGCCTATCATCACAGGT
AAGTGNTTTTTAAAAAAATGTAACAATGTTTCCAATACTGTATTATGAAT
ATGACTGTAATACTGTATGCCATAAAAATTTTATAATGATTCATTCATTA
GTGTATAGGCTAGGCTACCGTGAAGCAATCGTATCGATTACACTAGGCTA
CCGTAAAGCAATCATATTGCTGCTTCTTCGTTATCAATGCATGAATCGTT
ATACCTGTAAATAAATACGAATTTCTTTTTCACATTATCTTTTCATTTTT
GATGTCTAGTGTTAGTAATACGTATAACATCTACAGTGTTTTGTATCATA
TAAGACAATATTGATGTAGGTACTGACAGACGATTCATCTTGTAAACAGA
CGACGTAAACTTACGGTATCGATAAATACAGTACAGTACTGTAAATGTAT
TTTCTCTTCCTTATGATTTTCTTAATAACATTTTCTTTTCTCTAGCTTAC
TTTATTGTAAGAATACAGTATATAATACATATAACATACAAAATATGTGT
TAACCGTTTATGTTATCGGTAAGGCTTCTGGTCAACAGTAGGCTATTAGT
AGTTAAGTTT
>rnd-5_family-1106#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
AATGCAACATAGAAATCCTGCCTGAGTTTCCAGCCTGCTGTCCTGCAGAN
TTCGGACTCAAGACTGCAACATCAACTCTTNCCTGAATTTCCAGCCTGCC
GGCCTGCCCTGCAGATTTCGGACTTGCCAGCCTCCACAATCGCATGAGCC
AATTCCTTAAAATCGCCTCTCTNTCTCTGTTTCCCTCTCCTNTCTCTCTC
TCTTCACACTCACA
>rnd-5_family-319#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
TGACGATAGCAGAGTCCAACAGGAAGAAGAAAGACTCCTCTTCTTTCCTG
GCAAGGACTCAGCCAATGAAAAGCCATGGACTCTTTGTTTACTATAGCCC
TCCCAACTTCCTTTTCCTCTCTATAAAAGCGTTCTCCTTCCCTTGCCGTG
TGGGGACTTGCACGTGGCTCACCATGGTTGCAGACTCCAAATTGCAATTC
TCTGCTGATCCTGAAATAAACCCATCTTTGCTGGAGAAATATCTGGCAGT
CTATTTGTTTCAGGTCAACATTTTGGTGGCCCGTACGGGGACCAGAGAAG
ACTCCCGATGGCTCTGGGGCTGGTGAGCAAACAGGTGCGGTACCCACAAT
TGAGCCCATTGTCGCTCACTGCTTTTCTCGCCGACCCTGGAGTTTGAAGG
TACGTCTTTCTTCTGGATCCGAGCTCNCGCCCTCTTTGCATTTGAAGCTC
TCCAGGCTTTATTCGGGATCTTTTGGTTAAGGCCTGTCTGTATGCGAGTA
CTCTTTTNTACTTTGGTCTGATTTTGAGATCAGACTGTTTCAACTGAAAC
TGGCTAGCCTTTGGTCCATTTCCTTTGGAACAGGGGCTGCTTCTNCTGAA
GCTGGCTNAGCCTTTGGCCCATTCCTTTGGAAACGGGGCTNCTTTCTCTG
AAACGGTGCTGGGATTTTCAGCCTTTGGCCTGCTCCTCCGGGACCGAGCT
GTTCTCTGAAAACTGGCTGAAAAAGCCTTTGGCCTGGCTCCTCCGGACAA
GCTGTCTTTGAATTGGCTGGGTTGGCTTGCAAGCTGTTTGAATTGAGCCG
TTTGTGCTGTAGGCTGTTTAAGCTGTTTGAAAATTGTTCTTTNCTCTAGA
GGAAAANCCTNTAGGAAATGGGATCCCAGTTATCTAAGTATTTTGAGGGC
GTCCCCCCTACAGGGACTCCGGCCGATTTTATGTTTAAAAACCGCGGTCC
TTCCTCATGCACATTTCTAACTAAATGGACCGACCTGACCAAAGGCAATT
TAGAATATCAATGGCCATTATGGGGAACTTTTGAAATCCCCAAACTTAAT
TTCCTTAAAACCGAATTGGACTACAATAGCTCAAAAATTTCCAGAACTGA
GTGGAATGCCTATTTCGATTGGTATTTTGAGGCTTCCCAATGTTATCAGG
AGTCTAAAATTGCCTCTCTGCAAAACAAGATTTTAAGATTAACTGAGGCA
AAACAAACGATAAAGATAAAATGGCTCCTCGAAGCCTCAGGCTCTTCTTC
CTTGGCTTCTTTGTCTCAGGCTCCGCCTCCGGCGCCATCTTCTTCCTCTC
CCTCGGCTCCTTATGCCAGACTCTGCCTCCGGCACCATCTTCCTCCTTCC
CTTCTATGCCGCCTACGCCTCCACTATACTCTCAATTCCCCCATACTAAT
TCTCTCGCCAAACTTCCCCTTTTCTCTGAAACTCTCCCCACTCCTTTTCC
TCTGAACTTGTCAGAACCTGTCCCTTTAAAGTTAAGCCTTCTGAGGATCC
AGAGGCTAAACTCTTAATTTCTTATATTCCCTGGACTAAAGCTGAACTGC
GAGCCATAGTCAAAGATTTTCCCAAAGTAACCGAAGATCCTCACAGATTT
GCTGAGGAATTTAATATAGTCATTCAAACTTATCAACCTGGTTTCTCTGA
CTTATATCAGCTAGTTCATATGCTTGTCGGTGAAGGCCAGGCCCAGCATT
GGATGAAAACCGCTAATTGGGAAAGTCCTGAAAGGTCTCTAGAATTACAA
CCGGGAGACCAGCCCGCTAACTTATTATATGATCAGGCTCGGGCAATCGC
TAGGCGACTTCATCGAGCAATTCCTAGGGCTTTTCCAAAGCCTGCTGATT
GGAACAAAATTCAGGCTTGCACACAGAAATCTGACGAACCTGTTCATGAN
TATTACAATCGACTTCAGATTGTTTTTAAAGAAAATTCTGGTCTTCCTTC
AGATGTTGATTCCACCCGGGTAGCTTTTAACTCTATGTTTATTAATGGGC
TGAACCGGGACCTTTCCCTTCTAGTAAAAAGGACCAGGATGGAATGGGAA
ACTATGTCCACTCCAGATTTAGTTAATCTGGCAAACCAGCTCTCTCACAC
TCTAGATGAGTCACCTNAAAGGAAGACCGCCAAAATTCTTAATCTTCAAC
TCCAGCAAATGAAGGCTCCTAAACGAAACCAAAACCCTCCTAGTTTCTGC
TATTATTGCAAAGAGCCAGGACATTGGAAAAGAGATTGTTACAAATTTAA
GCGCTTTAGGCACCTTCAGCCCTCTAACCAGCCTTTCCAACGTCCTCCCA
ATTCTCAGTGACGGGGCTCTGAGGAACTACAGGGGCTCTTCCCAATCCTC
CCTCTTAATCGGCTTGGAGAAACATTTCTTCCAGATTGGGGATGAATCTC
TTCCAGTCCTNACTGACACCGGAGCCACACTCTCGGTGCTCAACCNCACT
ACTATAAAGCAGCCCCTGCCTCGGAGTACTAAAACAGTTCAAATAGTGGG
GATCTCTAATGAACCTCAAGAGGTTCCTGTCTCTGAACTTATTCCCTTTT
GTTTAGGCCCTTTGAGAGATACACACCCTTTTCTCCTTAGTTCCTCCGCC
CCTATCCGTTTATTAGGCTGAGACTTCTTAGAGAAGTATCATGCCAGAAT
TTCTTCCTCCCNAAAGGGGGGAATAATTCTAGAATTTGACAGTAGTCATC
AAAGTAACCGACCAGGTGAATTAAATGACCCTTTGACATCTTTTATTTGT
TCCGTCTCTGATGGTACTAGAGCNGATTCTGGAAACACTGATCATTTGTC
CCTATTGAATCAGCTACCACTTTCCTTATGGGCAAAATCTCCAACTGATG
TTGGCAAAATTCACAGCGCACCTCCCATCAAGATTCAAATAGATCCCTCA
AAACCTCTTCCCAGAATTAATCAATANCCTATAAGTAAAGAAGTCCTTCA
AGGCATAAAGCCCATAATAGAAGATTACAAGGCTCAAGGCCTCATTATCC
CTTGTACTAGCCCCTGTAACACTCCCATTTTACCGGTGAGAAAACCTAAG
GGCTGAGGGTNGAGGTTTGTCCAGGACCTCTGAGCAATAAACAACATTGT
TATCCCTCGACACCCTGTTGTTCCTAACCCTCATACGTTACTAACATCCA
TTCCCACCGGAAGCAAATTCTTTACTGTAATTGATTTATGCAGTGCATTC
TTTAGTATTCCAGTTGATGAAGCTAGCCAATACCTTTTTGCCTTCACTTG
GGAAGAAAAACAATTCACCTGGACAGTAATGCCTCAGGGTTNTACTGAGA
GTCCTTCTTATTTCTCGCAAATCCTGAAGGCTGATCTGGATGACATAAAG
TTCCCTAGAGGTTCTACTTTGTTGCAATATGTGGATGATTTGCTTCTTTG
CTCTCCTTCTCAAGCCTCCTCACAGGAAGACAGCATCCACTTGCTAAAGC
TTTTAGCCTTAAAGGGACATAAGGTCGCCAAAGAAAAATTGCAGTTTGCC
CAAACCCAGGTTNGATATTTAGGGCATCTGATATCAGAACAAGGGCTACA
CCTAGATCCAGATAGACTTCATGGTGTCCTAAGTTTCCCAAAACCCNAAA
CTAAGCGCCAACTGNAAGGTTTTCTTGGGCTAGTTGGTTACTGCCGAAAT
TGGATTCCAAATTTCTCTCTTATGGCCAAACCTCTGTATGTTTTACTCAA
CAATAACAACCCTGACCCAATTTTATGGGAAGAACCGGATGACGCATAGC
CTTCAAGGCCTTAAAGGAGAGTTTGATGAACCCACCTGCCCTTGGGCATC
CCAATTATCAGGTTCCTTTTTCCTTTTTGTATACGAAAAGGAAGGGAATG
CCCTTGGGGTACTCACCCCAAAACATGCAGGCCACCATTGACCCATAGGG
TATTATAGCCAGCAACTNGACCCTGTGGCATGGGGATACCCCCCTTGCCT
TAGAGCTGT
>rnd-5_family-1340#DNA/hAT-Charlie ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
AAAAACNGATACTCGATTCAGTTATTGGAAAACTTTTAAGTATGTTTGGA
ACAACTTGGGTATGTGAATCTACTTTTTCAACTGTAAATTTTATGAAATC
TAAATACAGATCAAGTATTTCT
>rnd-5_family-127#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
TGTGGTACATCATGTTAACAANGACTTAAAAACTCAANACAATACTATAT
TTTGTAGTAAAAGTATAAAAACATGGACTGGAAGGATACACACCAAATTC
ATGATAGTGGTTGCCTCTGGGGAGGGAGGGAGGAGAACTGGGGAAGGAAG
ACGGGCTTTCAACTTATCTGTAATGTTTTATCTTTTAAAAAAAAACTTGA
GCATGATGACAAAATGTTAACGTTTGTTAATTCTGGGTGGTAGGTACATG
GGTGTTTGTTATATTATTCTTTGTACTTTTCTGTANTTTTCAAATTAAAA
AATAAAA
>rnd-5_family-110#LTR/ERVL ( Recon Family Size = 26, Final Multiple Alignment Size = 22 )
TAGTGTAAGCCCTGACAGTTGGCTTTTCTTTTTTTGTAATGCAAGTGCCT
GACATTAAGCTTTGATTGCCGAGGCATCCACTTCAAAGAGGCATCCATCT
CGAATAAACACATTGCCAGCCACACGACTAGATAAGAGCCAGGCCGNCTC
TCCCTCTCCTTTGTTTTAGAGATCCTGGTTGATCTCGATAACTGACCATT
TGGGCCACTTGTTTTTTCTCTTCCTGCGCTTTAAATTCCCGCTCTTATGT
TTTAAATTCACCAATAAAGAGTGAGCCCGCGAAACCCTAGGCCCCCACCC
TCGACCCCAATAAAGGCAGAACCCCAGGCCCGTGCTCTCNCTCTCTCTCT
CTCCCCGCGACCTCGCTGTGTGGCCCCAGGGCGTGCCGTGTANCTTCCAG
GACCTGTGAGTAATAAACCTTTATTTTTTCAAAGTTCCCTGATGGTTGTT
GCTGAAGGGCGTCTTGCAATCATAATAAGAACCACAAGGGCCGGTCCAGC
CACAACACTGGCTATTGATAGGCTGAGACCGGCACAAAA
>rnd-5_family-1966#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
TTCAAAAAGAAGACCGGTTNCGGTCCAAGATGGCGACATAGGAAGNTCCT
GAGCTCNCCTCCTCCCACAGACGCACTGANTCTACAGCTACATACGGAGC
AATTCCCTCTGAGAGAAATCCAGAGGCTCGCTGAGCGACTCCTACACGTC
GGGCGAATGAGAAAAAGCCCACATCGAAGCGGGTAGGAGAGGCTGGGACA
CANTCTCGCCATAAACCCCACCCCCGGCTGCAGTANCACACAATCAGGAG
GGAACTCACGANCCCGGACTTCTCCCTGAGGAGCGAAGGGTTTGGACCCC
ACATCCGGCACCCCAGCTTTTAAGACCTGCACCTGAGAGATGAGCCCCCA
AGACATCTAGCTNTGAAAGCCAACGGGGCTTGCATCCACGAGACCCATAG
GACTATAGTAAACAGAAACGGTTCTTAAAGGGCTCGTGAGCGCTGGGACT
CATCCTCCCCAGGGCCCAGCACAGAGGCAGCCGATCGAAAGGCGCCCAGA
CTTTNCGTGAAAGAGGNTCGTTTGCTTATCTTAAAGCATCGGCCCGAGGG
GCAGGCATCTAATTTGAGCACACATCTAGGGGCCTGCTGGAATACTTCCG
GGGACAGAGGCTGGCAGNCGCCGTCTTTGTGCTCTCCCTCTGCCNCGCTC
CAGCACCAGGGGACACCACATCTCTCTTTTTTTCTTTTTCCGGCGGGTAC
CATCTTCATCTCCCCCTCTGCCTCGNTCCAGCCGGTGGGCACCATCTTCG
CGCTCTCCCTCTACCGCGCTCCAGAGCACCAGCATCTCCCGGAAAGGAGC
TTTTACNCACGTCTGGTANCCCGANTTTTACGGCTGCCGCCTAGGGGATG
CCCCTTGATCGCTGGCTCTGGAGGCCAGGGGGGCTTGTGCTCCTGGGTCC
CNCGGGACTATAACAATCGGAGAGACAGTTCTTGGNAGGCTACCACCCCG
GGGCACTGTGCAGACAGCAGACTGAAACACAGCCCCGAGTCTGTGAAAGA
GGCCTATTTGCTTGTCCANGAGCTNTGGCCTGAGGGGCAGGCTTCTGNTT
TGACACACATCTAGGGGCCTANNGNAGTGCTCCAGGGAATAAGGCCAGNG
GGACGGAATCTTTGCGCTCTCCCTCTGCCTCGCTCCAGCATCGCCAGTAT
CTCCCAGAAAGGAGCTTGTACACTCGTCTGGCGCCCCGGCTTTTGCGGCT
GCCACCCAGAGGACACCTCTAGATCGCCTGGCTCTGGTGGCCAGCGGGGC
TTGCGTTCGCGAGTCCCANAGGACTGTAANCAACGGAGAAAGAGTTCTTA
AACGGCTACCACCCCCAGGGCGCAGCAAGAGGCAACAGACCCAGGGCTCA
GTCTCTGTGAAAGAGGCCTATTTGCTNATCATAAAGCGTGCGGCCTAGGG
GCAGGCTTCTAATTAAACACACATTAAGGGCCGACTGTAATCCCTTCCGG
AGACCTCAGAGGGCAGGTGCCTATCTTTGCGCTCTCCCTCTGCTNCGCTC
CAGAGCGCCAGTATCTCCCGGAGGGGAGCTCTTACACGCGTCTGGTGCCC
CGGCAGTTTTCGTGGCTGCCGCCCAGGGGACGCCCCTTGACCGCCTGGCT
CTGGTGGCAGGGGGCTTGTGTCCCGGACTGTAACAATCGGAGANACAGTT
CTTGGCCGGCTACCACCCCCAGGGCACTGCACAGACAGCAGACTGAAACA
CACCCCCAGTCTTTCTGNGAAAGAGGCCTATTTGCTTGTCCTGGAGCTTC
GGCCTGAGGGGCAGGCTTCNGGTTTGGCACACATCTAGGGGCCTATGAAG
TGCTCTCAGGGGACAGAGGCCAGCGGATGCCATCTTTGCGCTCTCCCTCT
GCCTCGCTANGNCTCACCGGTATCTCCCAGAAAGGAGCTTATACACTCGN
CTGGNGCCCTGATTTTTGTGACTGCCGCCCAGGGGACACCTCTAGATTAC
CTGGCTCTGGCGGCCAGTGGGGCTTACGCTTGCGGTCCCACAGGACTGTA
TATATTTGCATACTTTAAAAGCTGCTGCCTGAGGGTCTGGCTTCCAATCA
GCCTGAATCTAGGTGCTGACTGAGATCCTCCCCTTTGGGACACTGACAGG
TCTTGGCACACCCTCAACTACTGGGAGCCACTNAAAATANAATAGGCTGC
TTGGACAATCACAAAGGTTTGAGAGACAACCAAGAGCTAGGGCAGGGTTG
AA
>rnd-5_family-3319#LTR/ERVL ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
CCCCTTGGGGTTTTGGATNCGTCGCCTCCCTGACATTGCTACCAGGTACA
CTCCTTTNGAAAAGCANCTATTANCTTGCTACTGGGCTCTTGTCGAAACT
GAACGTCTGACCCATGGAGGCCTTGTGACTCTCCGGCCTGATATTCCCAT
TTTGNGGTGGGTCAACTCGGACTCAACGACTAANAAGATGGGAAGGGCTC
CAAAAGCCTCGCTTGTCGAGTGGAAATGGTATATTNAAGAACGCAGCCGG
CTGGCCNNAGCAGAACCTCGGCTTTACGTGAAANAGTGGCAGCTATCCCT
CTGGGGAATGGGGCTCTCAGTTCACAGAGGTTCCCCTAAATGCCTGGGCC
TGGTTCACTGATGGTTCGGCTAAGCCGAAACTCGATGGTGTCCACTGGGC
TGCTGCAGCTGTTCAGCCTCAACGCCAGCTATGCAGAACCGAAAGTGGAA
ATGGTTACTCTGCTCGGTGGGCAGAACTCAAGGCCGTTCTCACGGCNCTG
GCCGATACTCCCCTTGATGAACCTTGTTATATNCTTACTGACTCTTGGAC
TGTCGCAATGGCTTAGCTGTTAGTCCGCCACTTGGAAAACTACGACTGGC
AGATTAGAGACATCCTCTTNGGGGCCGTGAACTGTGGAAACAAACCTGGC
TGCTGATCGAACCGTCNGGGCCACTCATGTAGACGCCCACGGTAAGGGCG
TGTTCTCTGATGAGACCANCTGGAATCAAGCTGCTGATCCAGTCTGCCCA
GATTGCCACCACCGCTGCCTGGATCCATCATCGTACCGGACATGGCAACG
CGNCCACCATAGACTGGGCACAAAGTAAAGGACTCCATGTTTCTGNTGCA
GAGGCTACCGCTGCATGNCAGACTTGTGACTCCTGCCAAAAGTTGACCCG
TTTGTCTCTGTGAGGGAAGCCACATTGCACGGGGCATTGCCCCCGCCCGC
TCCTGGCAGATTGACTACATCTTGGGGCTATTGGTGGTGCCTCACCGCTG
TTGACACTTNTTCAGGTTATGANGTTGCTGNTCCAGTCCGATCAGCCGAC
TCCAGCCACACCATTGTGGCCCTTGAAACTAATCTGTGTCATNTNTTCGG
CTTTCCGGACCANTTGCANTCTGACAATGGTGTACCTTTTATCACAAAAG
CCACTCAACAATGGGCCGATAGTCAAGGTATTTGATGGACCTCCCACGCT
CCCTACCATCCACAGGCATCTGGTATCGTTGAGCATTGGAACGGCCTCCT
CAAAAATCGATCTAAAAAGATTTCTGACTCTACTCCCTCATCACAGTTTG
GTTACTGAATGTGGCTGTCCCCAGAAAGGGATCGTCTCCTCTCGGCCGCT
TCCTGGGTAACGATCAGGACGAAAGGTAGTGGGGGGTTATATAGACCTAT
TTTGAAAATTCAGGATTCTATCCTGACCATTCCTGGGCATGATGCTCCTT
TCTTTCCCCNAACAGCAACCCCAGACCAGCCTGTTAGGTACACTCTCTGG
GTGGCAGCCCGGCCAAAAGGGGAGCAAGAGGATTCAAACTTAATTCTGGT
TCAGCCACCTGGATTCTCTTGTTGGATCGACATGGTCCTAGATCATAAGG
ATAATGACCACTTGGTTGAGTACACTACTTGCTAAATCCCCCTAAGTGGN
CCACGCGGGCCAAAGTGGGGAACATAATGGATCTCTGTAAGTTTTATAAA
AATGNCCTTGTCCCTCTTGCACTGACCCTTCTGGATGAAAGATCTGNGTG
NAAGCAGAGGATGATTGGGGAAAAGGTAAAGTTATAGCTACTAGAATGGG
ACATGCCAATTTTGTAGNGGTGGAGGGAGAGCAACATCCCTGCGCCTGGG
GAGGGAACACCTTAGGCGCTGGGAGGTAGGGAAGGAGGGACATTAATGAT
CTTTGTCTTTCAGAACCGCCCCTGGAGCCTTCCTCACGAAGGAAAACGCC
CTGGCGCGGCTCTCCCAAACTGTTACAAGCGCCTTAAATTTAACTGACTG
CTGGGTCTGCCATCCCCTGCCAGATGGCTCTGACCACGATTTGATCACCA
TTCTTAACCTTACCGAGAAGTCTATCAGAAACATCAGGAGATGGCCCCAA
CCCTGCACCTCCCACGCAAAACACCTGTCAACACCTTCGGATGTCNTCCC
CATCCCCATTCCCACAGTGTTNCTCAGTCATTCTCTGTTGGCGTGGACAA
ACAGCACAGGTTGGACTGACTGCTCTCAGGCAGTCTCCAAAAACTAGGAC
TAGACTCAATTATTCGAANTGAACTGGGAACCCTAAGGCTTACCAGCTGG
CCGGGAGGCCACATTGGAGGCACTGTCACCTGTGCCCCCCGACTGACATA
GGTCCCACTTGGGGGTCCCCAAAATTATAAACAACANTTTCTTTCCAGGG
GCACNATGTGCGCCCGGGACTGTACATTTGTGTAGAAGCCAGGCATTAGC
TTGNCTTCCTCCTGAAAACACGGTGACTTNNACCTTAGGGGTGNTCATAA
GAGACCTTCAAGTGTTTT
>rnd-5_family-3070#LTR/ERV1 ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
TAAAACCGAGTTCCCTTACCGAGTTTATGATTAACCTCTCTATCCAAAAC
TTTATTCCCTTTCTTGTCCCCTCTGACCTCAATCCTGTGCTAACTGAACA
CTAATCAACCAGAGTCAGATGACTAAAATTGCTGTTGTCGATAACATCGT
TAATGTACTAAAATTGCTACTATAGATATCATCATTAACGTACAAACTCA
GGTTGTTTCTCCAGGGCAAGATGAGCTAACAGACCCCCGAGCCATGGACC
ACCTGGCCAGAGAATCATAAACCAGAGACATCCTGACTCCCGAAACTATG
ATTAGAAATGTCACAGAAACGTCACCAGACGATGATTAATCCCAGCCTCT
TTGTTCTTCCCCTTTAAAANANCCCTAACTCAAAGACCAAGTNGGAGTGG
ATCTGAGACTTGTCTCCCACTCCCTTGCTGGGCGCCNTGCAANNAAACCC
TTACTTTGCTGCCAACACCTGCTGTCAGGNTTTGGCTTTCTGTGCCGCGG
GCACATGAGCCCTTGTTGGT
>rnd-5_family-2125#DNA/hAT-Charlie ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
CCTTTCTCAACCGGGGTTCCGTGAGAGAATTAAGCCCTAATGCCCTAAGG
CATCCATTGTATGTAATGAATTAACTTCTCTCCTGTGCATCTAGAATGGT
TTACCATCCTTGGGAGAAAATAGTCACTCAAATCATTTTCTGTAGGGCTT
AGTTCTCTCGNGGAACCCCGGTTGAGAAAGGCTGGTCTAGATATTTTCCT
GAGATGGCTGCTTATTATCGGCTAAAATGTGTNCTANACGNGAAGAAGTG
NATTCGAGCTCANTTTGTTTTTCAAT
>rnd-5_family-444#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
AAGAACATCACATTGATCCANTATATTGATGCANCATGCTGATCGGNCCG
GATGAGCAAGAAGTGGCAAGTACGCTGGAGGCCTTGGTAAGACATATGAC
TCCAGAGGGTGGGAGATAAACCCTACGAAGATTCAGGGGCCTGCCACATC
AGTGAAATTTTTAGGGGTCCAGTGGTCTGAGGCATGCTGGGANATCCCCT
CCAAAGTAAAGACAAATTATTGCATCTTGCACCTCCTACCACNAAGAAGG
AAGTNCAATGCCTGGTGGGTCATATCTGGAGCATATTTAAAAATTGACAA
GACTGTTCTNANCCATTATGCNGAGTGANNTGGAAGGCTGCNAGNTTTGA
GTGGGGCACAGAGNAGGAAAGGNCTTTGTAGCAGGTCTAGATTCCCANGC
TTCGGTGNAAGCAGGCCTGACACTTANGCCTGTATCACCTTTNATCTGAC
CCTATGGTGCTAAGCNTANCTGTGATGGGGAAAAGATGC
>rnd-5_family-1758#LINE/L2 ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
CATCCACTCAGAGTTATCCATCTCCACTGCCGCTACCTCGGNTTAGTCCA
AGCCACCATATCTCGCTTGNATTACTGAGCCTCCTGGTCTCCCTGCTTCT
TGTTCCCANGATTCCATTGCCTCTCGGCAGCCAGTGATATTTTAAACGTA
AATCGGATCACGTCGCTCCCCTGCTTAAAAACCTTCCAGGGCTTCCCATT
GCCTTTAGGATAAAATCCCAACTCTCGACATGGCCTACAGGCCCTTTATG
ACCTGGCCTCTGCCTCTCTCTCTCTAGCCTCGTCTCTCGCCACTTCCTAC
CGCTCACGCCACTCCGGCCACACTGGCTGACTGTCACGTTTCCAGGCCAT
TGCACACGCCGTCTCCTGGCTCACTGCTACTGGCCTTTAGGTCCCAGCTT
ACATGCCANTCCCCCCAGNAAGNCTTACCTCATCTGGACCCTCCTGAGTA
AC
>rnd-5_family-1104#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
GGCCTAAAATTAAGGCCCAATATTATGTGCTGCCTTGACATCTGGTGAAA
CCGGGAGGGCCTCGAATGGCCTAACCGCGAGTTCCCCTCCCCACTCTGCT
CCCGTGGATAAGGTCCCCTAGCCAAGCAACCCTCCTTATCNAGGGGACCA
GGCGCAGTTCCTGCTTATCCCCGAGTAGCGGGTTTCAGTTCCCTGCCAGC
CCGCGGAATTATTCAAACAAGCCAATCACATCCTCCCNCGGGAACCAGGG
GTCACCTCACCCTCTTGATACTACAAAGCCTGCCTCCCACAGCCCCTGGT
TGTTCACTCTGCTCCCGAGTGCAACCCCTATGTGGCCCTGCGTGGCGTGC
GGTGTCCTCCTCCCCCGGGCTGTGAGTATATGTGACTAATAAACTGCTGT
CGATCTCATCTGTCCAGTGTCGGGTGTCGTGCGTTCGGCCATCCCCATAA
CCCTAGGGCGGGAATCCCTCCCTCACCAATGGGGTGAATAGGAGGCGATT

>rnd-5_family-124#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
GGAAGAAATTTTCACATATTGAGGTATGGGGAAGTCATTCTGGCTTATAC
ATGAGTTAACTTGAATTTTATGCTAACTAAAACAGCCTGTTTGTGGCCTA
TCAAACATACATTGTACATCTGCTTTAATCATTAAAGAAAAGGGCGCATT
GACCAGAAGTAAAGAATGTCCANGTTAAAAATAAAGATTAAATGCCTCCC
TTCCTGGGATGCCAATGCTGGTNCTCCTTCGATGATAAGACTCCCTTCCC
AGGCGCCAAGGCCATACTGACTCGCTGTGTACGTGCTGATCTGTTTTTTT
GAAACCTTGAAGGAATGTATCCCTGACTTGTTTGATGTTCTTTGTTCTGA
CAAGATATAAAACTGTGCTGAAAACCATGCTTCTCCGGAGCAGTTCCTCA
GAGTTATCTGAGAGGCTGTCTTCCGGGCTATAGTCCTCAGTTTGGCTCAA
ATAAAACTCTTTTCTATTCCTATTATAGATTGTTTATTGATTATTTTCGT
CGAC
>rnd-5_family-2351#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TAAGCAGAGAGATGGAAATTCTAAGAAAGAATCAAAAGGAAATGCTAGAA
ATCAAAAACACTGTAACAGAAATGAAGAATGCCTTTGATGGGCTCATCAG
TAGACTGGACACGGCCGAGGAAAGAATCATGAGCTTGAAGATATGTCAAT
AGAAACTTCCAAAACTAAAAAGCAAAGAGAAAAAAGACTGAAATAAACAN
AANAAAATATCCAAGAACTGTGGGACAACTACAATAAGGTGTAACATACG
CGTAATGGGAATANCAGAGAGAAAGNAAGAAAGAAAGGAAAGAAG
>rnd-5_family-342#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
TGGAGATCCTCCCAATGTGAAACACTTGAAATATGAAAATATAGCAAANA
TCTTTTTTAAATGCATAGCTGAGCTTACAAGAAAGTAAGGGAAATCTCCA
GNGCCAGAAATGAAGAGGGAACTGAAAACCAGAGTAGNAACCGTGAGTCG
ATGCTGTAGCTGCCCTGNGAGTTTGNTAGTCCCAGGGGCTTGGGTNTNNA
AGNCCACGCGAGGGCTAGGAGATAAGACCTAGAGTCCATNCAAGGCGAAG
AGTTGGANTGCAGACTTCCCCTTTCCTACANAAAGCCAGAANCCCTAAGG
GCAGGCACCCTCAGTGAAAGGAAACTGGGAGAAAACAAATCCACCCGTCA
GCACAGGANGACGATAAGGAAGCTTANCTTCTGAANCTGAGCTCTGGATN
GAAAAGAAGTCTCCTCTGAGAATTCATGANCACAGGCCTGCCTTCACGTG
GGTTTGGGGTTCGAATTTACACTACCTGCGTGATNTAGAAAAATTAGTAT
AGAAAGTGNTCCAGGCCTACGACCCTGGTGTGCCTGGCAGAAACAAAAAA
AAAATTTCTCTGTANGGACACAATCCTTACTCAAGCCGGGATTCCCACAG
ATAAANACCCANCGGAAGTGAGCTCACAATCCAGAATTACAAAGCACACA
AGGAAACAANNCACCATGAAAAGTCAGCAAGNCAGCAAATAGCAGAATT
>rnd-5_family-341#LINE/L1 ( Recon Family Size = 25, Final Multiple Alignment Size = 20 )
CTGGCTATGACGGAGTAGCTTGTANCAGACCAACTCCCGCTGAGAACAAC
TAGAAAAGCCGGATAAAATTATTTTAAAAACCTGTTTGAAGGCACCGGAG
AGCTACCAAGGCAGCCAGGACTTGAGGGGCCAAGATCTCGGGAGAAGGGA
AACAGAAGTGAGGCCAGCCATCATGCTACTTTTCCCCTTAAGGCATTTNC
CAATTCTTGGTGCGCAGGAGCGGCTGAGAAGCCAAGCAGAAAGCTGTTGC
TTAGAGCTTTCGCCAGTTTCACTGGGCTAGGANATTCCGAAGAGAAGGGA
ANCGCAGAGAAGTGAGCTCAACATTCNGCAATTTTTCCCTCTAAGCGTTT
CTAATTCNTAAGATGCACGGGAGGAGGCCAAGCAGAAGATAGCAGCTAAG
NGGCTANAAAGCNAAGCAGAGCTTCCCAGTCTCATGATGCTGGAGGAATA
AAAAACTAGACTTCAGGGCANAGAGGCCCAGGTAAACANCCCATGCTTTC
AGTTNGGACCCCCGAAAGGACCGCACCCTAGGGATAAAGGCTANAAATAC
TGNAACCCAGCCTCAAATCAGCTCAGTCCCTGATTAAAGTGATCTGCCNT
ACTCTAGCTGCCTGTCAGAAGANAAGGCGANTCTCTCTGAAGGAAGATAC

>rnd-5_family-1480#LINE/CR1 ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
CAGTAATGAATNACAGGCTGATANNNTANAGTGCGTTGTAAAGTGAACGA
TNTAGGTAAGGTCTAGAGCCTTGNATTCTGGGCTCTGCCNCCACTGATGG
TCCCCGGGAAGAAGTCACCTTCATTTTCTGGGCCTCAGTTTCCTCACCTG
TAAAATGAGGGAGTTGGACTAGATGGTCTCTAAGGTCCCTTCCAGCTCTA
ANANTCA
>rnd-5_family-677#LTR/ERVL ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
AAGCACAGGGCTTGCAGGCCTGCGGGGTGCAGCCCAACA
>rnd-5_family-748#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 20 )
AGTTGAATTTTGTTTTTTAACAGATTTGGTGGCAGTGGCGGGATCCGAAG
GAAACTTCTGACGGCTTCGGGGACAACGAGAAACACAGGCACTGGTACCC
GTAAACCTTTGAGTTCTCTGTCTCGCCGTTTTCGAGGGCTGTGGGTAAGT
TCCTCTCGGTTCTGAGTTCCGCTCTCTTTGCATTGAGCTCCTGATCNAAT
TGGCTTTTCAGTNCAGGACGGGTCAGCTTGAGTCGGCAGATGGTTCTACC
AGAGCCCAATCCTNAGCCCTTGGTTAGNCCACAGCCCCAGTCCAGGGCTT
AGTGGGTCAGCTTGAGCCGGCAGACGGTTCCACCAGGAACCCAAGTCCCT
AGCCCTTGGTTAGTCCAGACCAGTCCCNATTCATTAGAGTCTGTTTAGTC
CGTAGTTCCNCGTTGGGAACNGCTGGTGGTGCNCACCTAGCGCCTCCTNC
TGGCCAGTCCATGCAGTAACATNTCTTTGGTTACTGCTGNTATGTTAGTG
TGCACATGNGGTAANGGCTATTGCTNATGGGAATCTCGGAAGNCAAAANT
CGCAAAATTNGTGGGCATGGATCGAGCACTTAAAAGNTGNNAGNGCGCTC
ACCAGCCACCTAACTCNAAAGACTCCCGTGTTAGGTAAGCTGGTCGCGGA
ACAGGTTAGATTGACACTAGGTCACCTGCCAACCNCAAGANAATTTCCGC
GCAACGAGGTACGCTGTAAAACACCACACAATCCCCAACCCAGAGNCACA
TCCCTCTTAGGTATTAACTTTGGCTCCGAGAGACCCAAGNCTTAGCTAAA
AAAATTGGGATCCCTAAGTTCCGAAGANCTGAGNATACCACCTCTGCACA
CCTGCTGATTTTATGTCTAAGAACTGTGGTCCCGGAAGCTATAAATATCT
TGACAANAATGGCAAAACCTTACTAAAGACAACCTAGAATTACAATGGCC
ATTATGGGGAACGTTCCANTTAGACAAGATCGTTTAATAAGGTACNTTAA
AANAAGGGTCCCCAAATCAAACAAACAGAATGGGATACCTATCTTAATTG
GCATGCAGAAGCTCCAAAATTCCAAANTAGCTTTACTAAAAGATTCGTTN
TAAAAGGCTAATGAAAATTAAAGACACAAGAGGTACCTAAAACAAAAGAC
TATAGGAGGNACACAGCTCCTACTGCTCCCCTCTACCCCCCTTTACTTGA
GTANTCATTCTACTATNTTCTGTCTGAATTGTCTTTCCGCTCTGAAGAGA
CTACACGACTAAACAAGTCCGCCAAGTTAGTGGCCTTACAGACACCCCCA
TATCTACCCTCAAGGAAGNTCCCCGTATGGACCCCTCCCAGNGTTGACGG
GACTCCGAGGGNTTTTCCGGTAAACTGCTACGTTATTCCCTTAAACAGCC
AAGGGAAACTAAAATTNAAATTAATGGAAAAACCTTGNCAAATACTGGTA
AATACTGAGCCTNCAGATGGGATCCTGGGAAACTGGCAGAAGCCGGCAAG
AGTGAGAATTCTTACCAGAGTCAGCTCTCCCGAATCTCTGTCTGTANTGC
CCAGTCGAGAGAGGAAAATAAAATTTCACGTTGTCCCTTCCTTTCCAAAT
CCAGACCCATCGGTTATTGATCCTTTCTCTCCCAGGGACAGCCGTTACCT
TCTTGTTTGTCTCGTTTTGCGTCCTGAGAACTTGGCTTGTCAGGTTGGGG
ACCCTAAGATATGACCGGACAGAAATGTGGGTTACACCCCATTTGCGGCT
AAATATGGCTGGACAGAAATGTGGGTTGNACCNCATTTGCAGCTTGGGTC
CTACCAATTACNGCCAGCCCTCAGGGGAATTGTCTTTNTTTTTTTTTCTT
TCTTTCTCTCTTTGGCTATCTTTGGGAGTGGCTCCGGATCTTGGGAGGGT
AGTANCTTCTGCACCCTCTTTGGGGACNCCTCTTGNGTCCANGGGGTTGT
TCAATACTGCCAGNATTTTTTATTTCATTTTATTTACTTATGTTTGTTGC
NTGTGTCAGCTGAAANCTGACAAGATATTTGAAAGCATCTTTTTTTTTTT
TTTTAAAGTAGCTCTGTGATCAGAAGTTGGCCAAACTGGAAGCTGATATT
CAGAGCCTGATAGGAAGTTTTTGGGGGAGGCCTTCTCCCCTAAGCTAAAT
GAAACTNTGTACCCAGGGGGAGAGAAATAAAATAACAAAAACTGTTCTGA
NGCCNTTGTGGANGGGTTTACTAAAACATTCCGAANANANACAGCTCTAA
ATCCAGAACATAAATTTTCGTTTCCATCTTAGTTGGAAATCTTCTCCCCT
AANNTAAAAAAGNAAATTGAAGATAACGTAGTTGAATGGGTANGTCAGCC
CCTCGNTATCATTNAGGTNGCCACCCAATTCTTTGAGAAATTAAAAACAA
AACTGTCCTTGTCTTACAAATCTTTACAAGACCAGAAATGCGGCTCTAGA
AACAATTCAAAGCCCGCCNATCCTTTTACCANTCCCCAAACCTTCCCTAT
TTATCTCAAGAGGCTTGTAAGTATTGTAAAAATTCTGGCTTAGGAAACAA
AAGTCNTCCTNGGAGGAACTCGCATTCTTTCCCTGTGCCTTTGAGATGTA
AATGTTCTACCTGGTCTTCTCCAGGAACCCTTATCTNNGCCATCTCTTTG
AAATGCAAACTTCAGAGAGGTAATTCTTACGAAGGAAAAAAAGGGGGTAG
GGAGTTATTCGGAACTTAGGCAAATGAAAAATCTTAAGTGTCTTCTCCAC
AAATATTAGTAAAAAGCTTTAGCCATCTGAGCAGGTAACCTTAACTTATT
CCATCTGCCAGAAACACAATTTNGATCCAACTTATTTTTATAACTAGTGA
GTTTTGTATTATTGTACCCGATTCATGGCTAAAATTTGGGGTTAGAAANT
CTAAGGTCTCTGTGTGCATCCGTATGTTTAGTGTGTCTATATA
>rnd-5_family-1310#LINE/L2 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
CTCCCATGGTTCTTGTCCTCCACCCTACCTCAGCCANCACCCAGGTNATA
CCCTAGACCTTGTCATTACCAATANCTATACCCCCTCTGTAATCTCAATT
TCAAGCATCCCATCCTCCTGACACCACCTCCCGTCTTTCCAGCTCACTCC
CTCTAAAACCCTGACTCCATCAATTCCGGATCTACCAGGACTCCAATCCA
CTGATCCTACCACCTTTTCACTGTCCCTCCTCTCCTCTCATGTCCTCACT
TCCCTCCTTACCCAGCTTAAATTCCGTGGTCCATCATTATAATCACTCCC
CTGCACACACCCTCAACTCCCTTGCCCCTCTCTCGCTNCGTCGCACTCGC
CTGGCAAAACCACACCCTGGTTAAATCCAACTCTGCACTTGCACCCACAC
AGTTGGCAGAAGCTGGAGAAANACACACAGCCATGCTGACTGGTCTCANT
TTAATGTCACGCACCCTCCTCCAAGGGACCCTTTGCACTGTCTCAGACCA
TGTTTCCCAGNTCTGTCGCTCTCCCATGGTCCAGACCNCTNCTTACCTTC
TCCTCTCTCCTCGATCCCCAGGCTCCTCCCCCACGCTCCCNCAGCGTTAC
CTCGCTTCCTACTTCACTGAGAAGATGGAAGTGATCAAAAGAGAACTCCC
GCAGACNCCNAANACCTCCNCCACCCAATCCACTGGTCTTGCCTCAGTTC
TGCCCTNCCTCCTGCTACCGTGGATGAACCCCATTTGCTCCTNTCTGTGT
CCCACTCGTACGCCGGATCTCCCGTCCCTCACCTACTCCAGGGCATCGCT
CCGGCCCGTCTATTTCCCCCTCCCCACTGGTTCATTCCAATC
>rnd-5_family-155#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
GTTAATTTTACGTGTCAACTTGACTGGGCCATAGGTGCCCAGNTATTTGG
TCAAACATTATTCTGGGTGTGTTTGTGAGGGTGTTTTCGGATGAGATTAA
CATTTGAATCAGTAGACTGAGTAAAGCAGATTGCCCCCACCCCAATGTGG
GTGGGCCTCATCCAATCGGTTGAAGGCCTGAATAGAACAAAAAGGCTGAC
CCTCCTCTGAATAAGAGGGAATTCTTCTCTGCCTGACTGCCTTCGAGCTG
GAACACTGGGTCTTCTCCNGCCTTTGGACTCGAACTNAAATATCGGCTCT
TCCTGGGTTCAGACTGGAACTACACCATCGGCTCTCCTGGTTCTCAGGCC
TTCGGACTCGGACTGGAACTGCACCATCGGCTTTCCTGGGTCTCCAGCCT
GCCGGCNACCCTGCAGATTTTGGACTTGCCAGCCTCCATAATCGCGTGAG
CCAATTGGTTCTGTTTCTCTGGAGAACCCTGACTACGATACAGATAGAAT
TATATAACCCTATTNGTCCTNTT
>rnd-5_family-158#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 20 )
TAANCCAANCGGATNTGCACTCTTATGCCAAGGTCAGGGCTCCGACCGGG
AAGGAGTGGGACCCTGGGACNTGGGATGGGGACATCTGGGTCGATGCACT
CGAAAATCTTGACTCCACGAATTCCCTGAACCCTCTGGGCCCGCAGAAGT
GGCCCACTCCTCCCTGTTAAAGGCTAGCTTTCCCCCTCTCTTGAAGGAAA
TCAGAGGCCTCTNCCTCGNAAGGCAACGCGTGTCCCTCTCAGGATCTACC
CCTACTCCCCTCCTGGCCACCAGACCAATAACTAGATTAAGTCAACATAA
CCNAGCCGGGGAAGTGCTGGGCCTNCTAAGGGAGGAAAGGGATTATACNC
CGAAGGAACTGCAGGACCTAGCCAACATGTACCCAGGAGCCGGAGAGGAT
ATACATGGAACTGGATCCTGAGGGTGCTNGATCAAGGGGGAGGNAATATA
AAGNTGGATAAGGGAGAGTTTATCGACATGGGAGCACTCTCCCGNGATAC
AGGATTTAACACCCTGGCAAGGACCCAGGAGATGGTGCTAACACGCTGCT
AGGATGGCTCTTGGAAGCTTGGAAAAAGCGATGGCCCACGCTAAGTGAAG
TAGAAATGCCAGAACTGCCGTGGNAGACGGTGGAAGAAGGGATTAAAAGG
CTCAGAGAAGTGGGCATGCCGAATAGACTATGTAACTAGACCCGCCAGAT
GATTATGTTCCACGGAAAGGACCCGAGGACACNCCATTTACCAAGGCNAT
AAGGAATGCGCTGGTGAGAGGCCACCAGCATCACTGAAAAGNTCAGTGAT
GGCTGTCCTCTGTAGGCCAGGGCTGACGGTAGGAGAA
>rnd-5_family-1587#DNA/hAT-Tip100 ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
CCCAATGAAGCTTAAGCTTCTGGCCCCTCCCTTCTAAGGCCCTGGGAGGG
ACCTAGCAATGTGTTCACGTGGTCATATGTTTTTGTAAAATTTGCAAAGT
AAGATATTTTAACCGCAATCGGTTAAGACCACTGTCTCTTTCCACTCCGA
CTTCCCCTCCGTCACACTTCCCCTCGTGTCGGGTGGCGTTGGATTTGGGA
TCCGGCTAAGGGGAAGTTGAGTTGGGGATACATTAGTTTGGGTTTAGTGG
GATACTTTATGCGATTCGCAGTCACTTCCGCGTAGTTNAGTTATTGCTAG
CCGTCCCGGAGTAGGAATGGCTTCCAGGAATATCCCCACTGTGCCGACTC
ACCCAGCGTNGTAGACACAGAAGCTGGTGCAGGGCTCAGGTCGTGATGTG
ACCGTGTCCTATGGCCCCCGGNANCAGAAGTATGNGGGTAGTGGAGGAGA
AACAAGGTTTGAAATGTACGGAGCCAGAAGCTAGTCTGTGGAAAATTCTT
CCAGTCATCAGAANTGTAAAANTGTAAGCGGNAGATTCATTTCTCATTGA
TCCCTAGTCAAAATGGAAGTTCTCTCCTGTCAGGAATATACTCGAAAAAT
GCAGNTAATACAATTANAAACGCGCCATACGTTTTTCTTTTTTTTGAATA
TAAATAGAATTTATCAGAATTCCTGTGTTTGTAGGGCACAACACTATAGC
AGTCCAAACAGCAAGTATGTTGTGNGAAGCCGCATGTTTTATGCATCCCA
ACATATTGGATCGCGTCTTAGCGTATCTGACGCATCTTGTCCTGANGAAA
GTCTGGTGGTTCCAGACGAAACGGCACGCAAAATTGCCACCGACACAGNA
AAATAGCCTGAAGAAACCACGGTGACAAAACTCCTACATATGTTCATCAA
TAAGTCAGTGTATGTAGCA
>rnd-5_family-510#LINE/L2 ( Recon Family Size = 29, Final Multiple Alignment Size = 20 )
GGCCTGGATTATTGCAACCGCCTCTCCTGGCCTTGTCTCTGCTTCCTCTT
NTCCCTCCTTCTCAGAGCTTACAGAATGATCTTTTNAAACNACTGATCTG
ATCATGCCATCTCCCATGCTTTAAATCCTCCAATGGCTCCCCAGTGCCCT
CAGGATAAAGTCCAGCTCCTTAACATGNCGTACAAGGACCTTCTTGGTCC
CATCTCCTCGTTCAGCTTCACTCTNTCCCTTCCCANCCTCGCACCCTATG
CTCCAGCC
>rnd-5_family-3252#DNA/TcMar-Tigger ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
GTCAGTTCTGCTATAACGCTTGTTTTGAAAACGCGAATTTGTTCCAACGC
GATTGATATATTAGGGAACAATTTGAGCATAACGTGAATTTCGCATTTGC
TTATGCGCGATTTCATCTGCGAGAAACACTAGGTGAACGCAGAAAACTGC
ACCCAGCTGAACCGAGCCACGTAGGAATACACAAAATGCACACACGCACA
CACCTCAAACATCTACCAGCTACCTCAGTTCATGAGCCACACCCGTCCAC
ATCTGGTGTTANAACTTTCCGTCCGATTTCAGATAACCCTCCTTCCACCA
CTTCACAATAACTCACAAGCTGCAACCCTTCCGACACCCACCTCCACAAG
CAAACTTCAGGTCTTTTTCAAGGTAAAGTGCCATATTTATTGTAGTATTT
ATGTATTTCTTAACCATTTAACATGTGTAAAACTATGCTACCGTTTTTGG
TTTCCTGTTCTTTTTTAATGTGTCACTGATGAAGTTTTTGAGTGTTGTGC
CCCAACCCCATTTTTCCCATAAGCCCTGTGGTTTTTATTGCGCGATTTTG
CATAGCGCAGTGATTTTTAGGAATGCATATGTCACGTTATAGCAGAACTG
ACTGT
>rnd-5_family-2900#LTR/ERVL-MaLR ( Recon Family Size = 24, Final Multiple Alignment Size = 20 )
AGCAGATTGTATTTTCCAAAGATGGCTNAACANTATCTCCCATCCCACGT
GCTCTTCTNNAATGTGACCTCGACACTCCTCCCATCGAGAGGTGGGGTCT
NTGTTCCCTCTCTTGAATCCGCGCTGGTTTGTGACTGCTTCAACAATAGG
CAGCGGATGTGGGCTACGTGACTTCCGAGGCTAGGTCAGAAAAGGCGATG
CAGCTTCCACCCTGCTTGGCGAACTACCTCTGCTGGAGCCCTGAGCCGCC
ATGTAAGAAGTCCGACTACCCTGAGGCCGCCATGCTGTGAGGAAGCCCAN
ACTAGCCCGTAGAGAGACCACGTGGAGAGCTAGGCTACAGTGAGAGAGAG
AGATGCCCGGCCAGCACCCAGCTCTTCNGCCCTCCTTACTCTTCCAGTTC
CAACCACTATATTTGACATCGCAACTAAATGAGAACCCAAGCTTGCCCAG
CCGANCCCTTTCTGAATTCTTGATNCANANAAACNGCAAGAGATAATAAA
ATGTTATTTAAANCATCTGAGTTTTGGGATGATTCATTCTAAT
>rnd-5_family-3193#DNA/TcMar-Tigger ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TCCGTCCCGCCCGGACGTGAATCATCCCTTTGTCCAGCGTATCCACGCTG
TATATGCTACCCGCCCGTTAGTCACTTAGTAGCCGTCTGGGTTATCAGAT
CGACTGTCGCGGTATCGCAG
>rnd-5_family-734#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
GGCATCTCTGTAGGTTTTGTCTGCNCGGCATCCATCTCCCCTNTTCTGGT
AACAGCACCTNNTTNTCATTTGGGACCCCCATTGGAATCAGACTTGGTGG
GACTGTCAATCAAGGTGCCCCACCCTCCCCTGGCCAAGGGGTGGGCATGT
GACCCAAGCTAGGCCAGTCAGAGTCTCTCCCTGGAATTTGAATCTTGAGC
GGAGNGACACAGAGACTGAAAACNGNTGGCGCTGACGCATTCAGCCGGAC
CNCCTGGAAGAGACTGCCGNTTGGTTCCTGCTCTCCNAAGGCATCAGACT
CAGGTCCTGTCTTGTCAGAGGTCTGGTTCTTCAAGTTTTCCNTTNATTCG
TGAACACTCACTTCCTTCCAAGAGGTTTCTTTTGTGCTTGCATTGGTCAA
AACCAGGTTCTGTCGCT
>rnd-5_family-466#LINE/L2 ( Recon Family Size = 23, Final Multiple Alignment Size = 19 )
CTCCCTCATCTCCCGCCCACATCTAATCAATCACCAGGTCTGCTGATTCT
ACTTCCTAAATATCTCTNGAATCTGTCCACTTTTTCTAGCCCGATNACCA
TNANCCCAAACCATGTGTCTGTCATCTGCACTACTGCAATAGCCTCCTAA
CTGGTTTCCCTGACTCCCGTCTTGCCCCTCTTCCAATCCATTCTCCACAT
TGCNGCCAGAATGATGAAAAACTAAATCTGCTCAGTGGCTCTTCTGTTGG
CTTCAGCATAGTCCAAACTCCTTANCATGGCCTACAAGGCCCTTCGTGAT
CCGGCCCCTGCCTACCTCTC
>rnd-5_family-3258#LTR/ERVL ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
AGTCTGACTCCATTTTTTGATGTTTGCTGACAGCTTTCAAGCCCCACCCC
CCCTCTTCCCCTTCTGCCCCACATCTGGGCAAGCTGATAAGAAAGCCCGG
GTGCTCCCTCCTTTGCGCCAGTGCAGCCTCTCTCTGCAAACTCTGGCCCC
ACCCCTAACCACNATAAAAACCCCAAGCCAGTCTCTTTCCTGCTCTCTCA
AGCCATTTCGGACCNGCTTGGGTGCTACCCTGCTCTCCCCAGAAAGCCTC
ATTATGTGAGTAATAAATCTTTTCATACCCTCTTGGGCGTGTGTGTGCGT
CATCAGTCTTGACATCCGAACCAAATTTTGGGTGGGGGTCTATCCCGCCT
CTGTAGGATGACCACAACA
>rnd-5_family-1108#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 19 )
TTGCTGGTTCTTTAATGTTTTATTTTCCAGATTTAAGGAACTTTTTCTCT
TTTCTCTTAAGCTATCACTTACAGCAATTTGGTAGACTATGCTTTTGTAA
ACAGAAATGAAACATTTACTTTTTCTCCCTACCTGATCCCTCCAGAATTC
AAAACTCTTATTNAGTATTCTTATTTTCATGGCAATATAGTTATTTGCAT
AAGTTCAATAAGAATCTGTTCTCCTTGTAACAGGACACAATTGGAAACAC
TGGTTNTATTACCAAGGCTTTGACTGGAATGTCATATTTGAGGATGATGC
ATAAAATCAGATATGACCAGACAGNTTTAAGGAACTAAGGTTGACTTTAC
GGAGCCAATAAAGCCCCTTGGAAAAACTGGCCTGGTATCTTGCTTACAGG
GTTCCCAGCCTTACAGACGAGTAAGGAAGGTCACTTCCTGGCAGGCCCAG
GAACCTCAGGATATTTTGGGGACCTCAAGAAGAGAGGAATTCACCCAAAT
CTATAGGTATTGCAGGNAAATCTGATGGCGAGTTCTTGGCTTGGCTTCCT
AGCCTCGAGAGGCTTTTAAAAGTCCAATCTGAGATTCCTTATGAAAAGTT
CCAGCAAAGCAGACTTNAAAAGAGCCTATGTGGTCAATCGCTATTCTTGC
TGCACTTATGTAAATAATCAGGCCAAGTTTAATGAGACTAGACTTATTTT
GCAAACAAATTAGTCTTACTTTGACTATCTTTGGTAGAAATGGGGGTGAT
TTAGAGAGAAAAATTATGTTTCAGTAAGAAATTANAATCTACCCTTGTGG
GTCTGTTCATTGTCTTTGAGCTATTTTTACCTCTTTGTAAACTGAATCCC
GCTCNTTTTGTGNATTTTGTCAGTAATTAACGTTTCCGATTTTTCTCTCA
CCCTCCCGACTTGGCGTCACTGAGAACTAAAACCTGGCTGCCCAGAGTCC
NTGCTAACTGTCTGAAAAATAACCATGACTGTGAGACACTGATGTATATG
CCAGCAGCAGAGANATTGTCAAACTGCAAANCAGGAAAATCCATCGGATT
GNAACTGCCGGCCCCATTCCATCGCTAAGACGCTTCGAGCCCAACATCTA
GAAATCTCGCTGGCTGCCCTCTGGACTCAAAAATTGGGTTAACAGTTTGT
TCTAACCATTAACCTTTNTTTCTCTTTTNTTTCCATAGAAATGTCCCTNA
TTAAATGCCTGATTGCTCACATNATATAGAGGCCTAACTTAGGTGGNCGC
CCTACTCCCANCTGCACACCGCTTCCTGAAATGAGACACAACTGTTTCAC
CNGGGCAGACCTACTCCCNNGNNTGAGAGACTGATTCGGTAAGATATGGG
GCAAT
>rnd-5_family-4764#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
TTTTTGCCGGGTTCGAGTCCCCGCCTAGGCGTGGGTTCAAGTCCCAGTCT
GGGTTTGGCCGGGTTCGAGTCCCGGCCCGTGGGTTCGAGTCCCAATCTGA
GGTGCGCGGTTT
>rnd-5_family-174#LINE/L2 ( Recon Family Size = 27, Final Multiple Alignment Size = 19 )
CTGCTCCTCAGCCATGCCGCTGCCAACCTTCCCCTCCTGCCTTTGCACAC
GCTGTTCCTCTGCCTGGAATGCCCTCCCTCCACCCACTNCTCACCTGNCT
AACTCCTANTCATCCTTNAGGTTTCAGCTCAAATGTCACTTCCTCCAGGA
AGCCTTCCCTGACCCCATGAGGTGCTTTTACAGCCCCCAAACTTCCCCAT
TCATCAACATGCCACGTAGTTGTGCACTTGTCTCTCTGTCCACCGAATGT
TAAGNTACAGGAATGGAGTCCGTGTCCTGATCCTTGAGTCTGGAACTTAG
CGGTACTAGAAATACTTGTGAATAAATAAATGAATGAATGAA
>rnd-5_family-998#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
AGGGAAAGCTCTTTTTTACCGAAGGCTGACAGTAAGGGATGACAAAATTA
GAAATTCACCATTCTTCAATGCCAATAAAATGGTCCAGGATAATCATTAA
TGGATGCTAAAACTATTAGGAGAAAGGTTAGTCTCAGAGACACAATTTTC
ATCCTTTGATAACNGCAAAGAGAAAGACGTACCTTTACAGAGANTTNTCT
GGTAGCAACCACTTTAGCCAGACTATAGTTTANCATTACTAATAGTGGAC
ATTACGTATCTCTAGTGACGACGCAGTATGAANTATCCAACATCATATGA
AGCATTCTTATCAANATGTTATACTAAGTCTAATTAGGCCTTTAGATGCA
CTCTAACTTCGGGGAAATGAGGGATAGAGGAACAAGTGTTTCTTTGAGGA
AANNACATTACACAAGTCCAGAACAATCTTCAGAACAANTCNAGAATGTG
AGATNNCTGGCNTGNACATCTTCAAAAAGTTAACGTTTNAGGGGGAAAAC
AAGTGGAGAGTCGTTCTGATGAAAGAGAGNAACAGAGACAACTATACAAC
GTAATGTGATGAATCTTGGTCGATTCTTANCTGGAGAGAAAACAACTATA
AAAAGGCATTTTGAGAAAATTGGGGAAATTTGAACACCGACTGNNTATTA
GATNATATTAAGGAATTACTGTTAATTTTNTTAGGTGTGATAATGGTATT
GTGGTTACGTNGGNAAATGTCCTTACTNTTAGGAGATGCATACTGAATAT
TTAGANGTGAAATGNCATGATGNCTGGAATTTGCTTTNAAATANTCCAGC
AAAAGGAAGGAAAGATGATAGATGAAGCAAATATGGCAAAATGTTGATAA
CTGTTGAANCTGGGTG
>rnd-5_family-1148#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
TTCACACAGCTTACTGTCTACATTAACATGACTTTACTATTCCATCTCTT
CATCAGCATGACTTTACTATTCCAGGAAACTCTTGCCCAGGAAGACAAAA
GTTGCAAATAACTTTATTGTTCGTTTCAGGAACTTCCCAAAAGACCATCA
ACTCTTCAATAAAGATCAGCATGACAATTTACNCCCTAAGACTCTTTGAA
ACCTTTGCCCAAAACTCCTCGCCTTGCTGTGTCCACCAATCCTAAACTAT
TATATCATGATCCTTACCCAATCCTAATCAAGCCCCTGATTGAAACACNC
CTTAAACCAGACTCCGAATCTCNATAAATACCCCGACTTTGCCCTTCCTC
CTCCGAGACGCTACCAAAACTCTGTCAAGGTAGTGTTCTCCCTTACCGCG
GTAAGCAATAAACTCAGCTTTGTCTTACCAACAGGTTGTTTTGGTGACAT
TTCGGGGAGCCCT
>rnd-5_family-842#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
ACTGNGTAAAATACGGATAAATNTTGTTTATAGGAAANGTGGTCCAGAAT
AATTGGGTANNAGGAGTGACGTCAGCANCACGGCGGCATAAGACGTCCCT
CATTNTNTCCCCCCCACAACAACAANAATTCGGCATCCATCCACGGACAA
AGGTGCCTTTGTGGGAGCTGTGGGATCCAGCACCATACGCCAAGGGACCC
GGGAGGAGTCTCGCCCACCTGCGCGTCGGGTAATAGGCGNACAGACCTCG
GTCCCGGCTGTGGACCCTGCAGTGGCCCGTGAACCGGCTCCAGCCTCTCG
GCCGCGGTCCAGGAGCCCCTGGAGAACGCTGNCTTAGACAATCACCCACG
GACGAGAGAGCCTTTGTGGAAGTCCAGGTTTCCAGAGGAGAAGTTCCAGC
ACACCGCTGGAGCAAAAAAATACGAGTTTGGACGCATTGGAGNGGGTAAG
AGGAACAGCTTGACTTTACCCGCATCACCCCTCCCCCAAGGCGGCACAGC
TTAGGGCCAAGAGAGACCTTCTTGGCCTGTGATTTCTCCCGTGGGGGAAG
GGAGAGCGTGTGAGTGAGCGCCCGGCTTCCCCAGCTGTGCGGGACGCTGC
CGAAGAGGCTCATTTCTCTCTCGCNCCATCCAGAGTACTGAATTGNGNAC
TCATGACTGGGGGNGGGAAGAGGCNGGGAGAGGGCAGATAGGANTCTCGG
AGGGCATTAAAGGGACGCGGNTCCTGCTGACTGCNTCGGGACTCCATCAG
GAAGCCCGCCCACGAGCCGCTGGGAATGCCTCACCCGCGGATCTCCCCAN
CGGGCCGTGGGCACCCCCAGCGCCCCGCGTGCCTCACCCACACCCCCCGC
CCACTCTGCGGCCGGCTCCCTGTGCGTGCTCCCGACGGCAGCGAGAGCAA
GCTTTGGCGGATGGCTAGTGAGCACGCGCAGAAAGCCGGCCNGAATCTGT
GGACCAGGGAGACCACAAACTTGAGCTTTAGCGCCACCTTCGGGAAAACA
AAAGAGAGGCTGTCAGCAGCCGGCCTGGTGCNTTGCAGGANCGAGAGAAG
GCATANAAGCTTAAGAATTCTGCCACAAGAGGGAGCAAGAAGCGTGGAGC
AGGTGTACCCATAGAAGGTCTGAGAAAGCCTCAGAATCTCTAGCAGGGCC
GACGGAAGGTATTTCTCTNCTGAAGGCAGTTAGTAAAGACTGGAGGAGGT
GACTGCTACTTCAAATGCGAAGACAGCAATACAAAACTCCAAGGAACATG
AAAAATCAAGGAAACATGACACCACCGAAGGATCACAGTAATCTTCCAGT
AACCGANCCCAAAGACATGGAGATCTNCGATTTACCCAATAAAGAATTCA
GAATAGCTGTTT
>rnd-5_family-1045#LINE/L2 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
TTTTCTCTCTCTCANTNGACAAACACAGTTTACTGTTGTGTCCCACTCAT
GTGCCAGGGGTAGTGAGATACAAAGACCCTCAAGAGCTCACAGCCANGCG
AGGGATACAGATAAGTAATTAATACTTATAATAACCGTATAAGGNGATAA
GNAATGAAGNACATTCTGTGGGAGCNCAAAGGAGACGAGGGATCAACTCT
CTTNGGAGGGGAGCTGGGGAAGGCTTCCCGGAGGAGGTGACATTTGAGCT
GGGTCTTGAAGGATGAATAGGAGTTTGCCAGGCAAAGAGGTTAGGGGAGA
GGNTTTCGGGCAGAGGGAACAGCATAAGTAAAAGGCATAGGGCACAGAGA
TTCAAAGTGGCTGGAGCAATAGAGTATGTGNAATGNGAGNGCCC
>rnd-5_family-549#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
AAAAAGAGTGAACTCAGAAAANCTTCCTACCCTCCCCTTATTCCTAATCA
CTNGAGACGACTCTAGACTCTTATCGGCCCAGAGACGGCACCAGAGGAAT
CTACATAACAAACCTTACTAAACAACCCTTATCTTCCATTAGTTCCCCCC
CATATATTTACCTTCCCACAGTTTGTCGCCCCTAGAAGCCCAAANCCCTT
TTCCTTTGTCTTGTCACTTCTCTANAAATTTATTGTTCTTTGTTAAGATG
CTATATAAGCCCGAGTTCTAACCACCCCTTTGAGTTACTCGTCACTGAGT
TTCTCCCGTGTGTACGCGCGATGCACGCGTTAATAAACTTCTGTGTTTTT
CTCTTGTTAATCTGTCTTTTGTCAGTTTAATTTCAGGGCCCCAGCCAGAA
GAACCTAAGAGGGTAGAGGAAAAGTATTTTTCCTCCCCTA
>rnd-5_family-365#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
TTAACAAAAATAAAAAAATCANAATACTAGAAGAAAGCATGGGAGTTTTT
TTAATAATTAGAGTGGGGAAGGCCTTTCTAAGCANGACACAAAACCCAGA
AGCCATAAAGGAAAAGATTGATAGATTTGACTACATAAAANTTTANAAAT
TNCGTATAGCAAAAAACATCATAAACAAAGTCAAAAGACGAAAAGGCAAA
CTAGGGGGAAATATTTGCAACACGTATGACAGACAAAGGTTANTTCCTTA
ATATACAAAGAGCTCTTACAAATCAATATGAAAAGAAAAACACTTCGATA
AAAGAAACAGGCAGTTCACAGAAAAGGCAA
>rnd-5_family-99#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 18 )
CCTAAGANGAAAGTCTGGAAGGATATACACCAAAGTGTTAACAGTGGTTA
TCTCTGGGTGGTAGGAACGNAGTGTTTTTNTTTTCTTATNTCTGCTAATT
AGTATTTATCTTCCACAAAACATATATATTACTTTCGTAATG
>rnd-5_family-27#Unknown ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AATGTGACACATACTTCAAGAAAACCATTTGAAGAGGTAAGCGCTACTCA
CAGCTTGAAAAAAAGAGGACATGCCTGAAAGTTCAATTTCAAGGGATTAT
GAGACGCATGCAAATCCAACCTCAA
>rnd-5_family-2894#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
CTTCGTTCCCCTCACATNCAGCCNGCACATCTCACGTGCTTCACGCCGAG
CGCTCCTCATTATTCCCTGAACACNCCATGNACTTTCACACCNCTGTGCT
TCTGCTCACGCTGTTNCCTCTGCCTGGAATGCCCCTTCCCCTCTTTCCAG
CCTGGAAAACTCCTATTCATCCTTCAAAACCCAGTTCAATGTCACCTCTT
CCGTGAAGCATTCCCGCTCCCNTCCTGGACAGACTGACTTATTCCCTCCC
TCTG
>rnd-5_family-2398#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
GTATCTGCTCATTTGTACAAAAGAAATACAGGAAGGATAAACCAGAAACT
AATGAGATTGGTTACCTACAGGAGGNGGTGGGAACGGGGTGGAAAGGATA
AGGGATATAGGGAGAAGAGTGACACTTCTCTGAGTATATCTTTTTGTATA
GTTCTGACTTTTAGAACCATGTTAATGTTTCACATATCCAATCAATTATT
CAATCAATTAATTAAATCAGAAGACGGGAGAAACCCTAAATTNGAATATC
TTACAAACATAAGCCTTATATACTTTAAATCA
>rnd-5_family-1329#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 18 )
TGTTGGCAACGTCTTTGNGTCCTCCTGGNGCCCCACCTCACATCNTCTCG
GCCCACTATGTACAGCCATTGCTGCAGCGACCGGCTNCGCGCAGGTGTAA
CCTGACAGCCTTGCCTCAGCTGCGCCTCACACGTCTTCCTTTCTGCCCCA
GGCTTCTGGTGCGCCGGTAAACCCGGAAGCGCNAGGGAGTTAACGCTCCC
TGGGGCAACCCTTGACCAATGGGAGACGGGAGCCGGTGGATAAATGCTCC
CCCTTCCTCTCTCGGGCGGACGGTTCTGAGGTGTGTTCTACGCGGTTCCT
CAGAAGCTCCCAGAGGATTGAGCCCCAGTTGCCCGCGGCGGTGGCCGGCT
CGATAACGCATCCCTGTATTGGCTTTCCTCCTTCCCC
>rnd-5_family-1319#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 18 )
TAAAAAGTGAGGAAACTAGAGAGGATTCTGGGAAGATGGCAGAGTAGGAA
GCACCAGGAATCTGTCTCCCCACCTAGACAACAACTGCACTGGCAGAATC
TGTCTGATGTAACTATTTTGGAACTCTGGAGTCTGCTGAAGGCTTGCAAC
TTCCAGGGGAAGGCTTGGATGGTAAATTGCGTTAATTTTGGTCAATTTCA
GCTCTTAGCACAGTAGCAGCTACCATCCCCCACCCTCAGCCNCGTGGCAG
GCAGCCGTGCACGCGTTCCTGGAGCAGCTTGCACACAGCTTGCGGGAGCC
AGGGTGGGCAAAAAGGACCCTGTCCTCCAAATATCGGGGATCTGTGCTCT
GATCGCTGATTGCTGCTTCTGATCGCGGAGGTGCAGACAAAGAGGCGGGC
AGCCATTGTTGTTGCACCTCCCCCATTGTTGCAAGCACCCCTCCCCCCGA
GCTGAAGTGACTTCCAGGGGATTTAAAGGGCCAGCGCCCTTTTCTCCCCT
TCATTTTTCTCTTTTTCCCCTTTTGGGAGCCAGACATTAAAGACTAGGAC
ATTCAAAAGCAACCGCATATACGGGGAAAATTAGAAAGT
>rnd-5_family-1939#DNA/hAT-Blackjack ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
TTTTATGTACCCAGTTTGCCNAGNATGGTCTCCATTTTAGCCTATTGTCC
GGCATTCCGTCTGGTTTAGCGTTTGCCCCGGATTTTTCATTTTTAAAGTA
TTATTATTAATAGTTGCATTAAAAATAAGCTAAGATGGGTTTAGGTNGAC
CTCCACTTTGTGTCTAGCNTCGGCTNTGGTCCCGTCGAGCAGTATGTGAG
ACATGTATAGTGAACAGAGTTCTTANCTTAAGGCGTGGTCAAATCACATG
TCTTTTTAAACANAACNAATAGACATCTCTCTTTCAAGGAGANCATGCAG
GGTACTCGNTGATAAAGNAAATGTGTTCAGGNACAAGCGGTNAGGGGCGG
CTANNTCCTTCCGGTCTCGAATGGTGGTGGGAGAAATATTCGATCTGCCG
CCCTGCCGGCCACTTGGTTTGCTAGCCAGTCGTGACGTGGCCTTGTCAGG
GCTTCAGGCCTGAGAGATGCNCGAAGCCGCCAGGTCGCCAGTCGGTGGGA
TCANTGGAAATAGGGAAATTATAGGCTAGNTNTACGTGAAATATGTACGA
GATAGAAGCTGAAGTCCTCACAGATCGCGGAGAGTAGTCTGAATGTCTTC
GCCATAGTGGTTTTGTCACTTATTNTATGGTGTAAATCTACAGCNACTAT
TTTATTGTTTGGCGATACTTTTTTTTTTTTTTTGGTAATAAACCCTTTTG
ACAGCAATGAGCTCAAAAGGAAGTAANAGTGCNCGCTTAATGAAAATTTA
AGTACTGAATTTCCGTTCTCAAGAAAGTTGATGATGAACGTGTAACTTGC
ACAAAATGTTTGTCGACATTTACCATCCACCGTGGGGGCTGTNATGATAT
CACTGACCACATGAAAACNAGAAGACACAAATCTGCTGAAGAAGCATCAG
CATCTACAAGAGAATTAGTAATTTAAGAAGACTGTGCCCGAAGATATTTN
AAGCATGCAGCTCAGAAGGTGCGTTTACGTATCACTCTGTGAAGCGTGAC
TTTTCATTTAGATCAAATGACTATTTTTCTAAATTAATTTCGCTCGTTTT
TTGATTCCAAGTTTTCTTGTGCACAGTACGAAAAGTGAATTGATAGCTGT
TAACGTGTTGGCTCGTTNGCAGAAGAANTTCGCAAGCAGTTAAACGATGN
CAGTTTTATATCAGTGTATCA
>rnd-5_family-917#LINE/L2 ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
AGATGGCTNAGAATNTTGGAATCGCTGTATCCTAAACATNCTTCCATGTC
ANTCTGGAAACTGTCTCCNGGTGGTTCTCCTACACGGCCATCAGAGGAAC
GTTCCGGAAGGTCATTCCTCTGCTTAAAANCCTTCANTGGCTCCCCGTCG
CCTTCAGGATAAAGCCCAAACTCCTCAGCCTGGCATNCGAGGTCCTTCGC
GATCTGGNCCCTTTTNCAGCCTCATCCGTCATCACATCCCTTAGCCACAC
CGAACCATCTG
>rnd-5_family-494#LTR/ERVL ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AGGGCCAGTTTCAGATTTCACCCGGGAAGCTCCCGAGGTTGCGAACCA
>rnd-5_family-603#LTR/ERVL ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
ATANAAATGAGCCAAAGATTGGCCCCTATGTTGTTTATTTCTTCACAGCA
GGCTGAGACCGTTAGCTCAAAGCCCGCCGGCGCCAAACTCAAATTTTTAC
ACATCCAATTGTTTTAAATATAGCCCAAATAAGCANATTTTTAGCCATTT
AGAGCCTGCCTGCTTTGCATACCCCGCGAAACTGCACCCAACATCTGCTA
GCCATACAGATAAGATAAACCCCGTGGCTATAAAAGACCCCAAGCCGCTG
CTGCCCTTTGGAGCTCTCTGACCCAGAGACTCCCCACCGTGCTGCTGAGC
GACATCACCTAGACACAAAGCCCCCTCTCCGATCCCCCTCTCCCCTGGGA
GTTCCCTTGCCCTCCTCCCCTTCTGGGTGGTGGCCCCTGCCGTAGCCTCT
GGAGGGTCTCGTGCTGTGAGGGACTTCCCCTCNCGTGCAACCTGTCAAAG
CGCCGCCCAAATAAAGCTCGTTGTGTGCTACTGCCACCTCGTGGTCATAT
CTTTTTCCTTGATCAGCCCCGAAATC
>rnd-5_family-3343#DNA/hAT-Tip100 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TGGCTCATGGGGCACAGTGATGGCTGGGTCTCTAACCCTCTGGACCTGGG
CCGGGACTAGGGTGAGGCGAGCGAGGCACCCGGGGTGCAAAATTTAAGGA
GGCNCTCACTCTCAGGGTCGTGCAGGTGCAGGGTCGGACCCGAGAGTGAG
CGCCTCCTTAAATTTTGCGCCCTAGGCGCTCGCTTGCCTCACCCTAGTCC
CGGCC
>rnd-5_family-699#DNA/TcMar-Tc2 ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
CACATATAATCCCAGATANAGGGCAAGGATGTTTCTTTTTTGAAAAAANA
NAGTCGCCGTATATTCGAGTCCTTACAAAGTCTCTCATATTATAGGACAT
TTCANTTTATTTTGAACAAAAGTACCGTTTGGGGAAGACACGTTAGCCTG
AAACAACCTCAAGTCAATNCTAGTTTTGGATGTTTATAGAGGTCACCTGA
CGGAATNTTTAAAAATAAAGTAAAANAAACTTAACACAGATTTAGTAATT
ATTCCTGGGGGTATAACCTCACAATTGCTAGATGTTGTAGACATTAAAGA
TATTAAAATAAAAGCGATACANTAAGTGGTTATGTATGGAATGAATTTCT
ACTAGCTGTCCTAATGNTACGCGAATGGTAGGTAGCTTGTGGCTTGGGAT
AAAATTTCCAGTGATNACGATACATGGATTCAAAAAGTGCTGTGCTCAAA
CAACTTGAGACGATGTGCTCTGGAAAACTGTTTAGATGACTCAAAAAGTA
GCTCGGTGATGACGAAGACACTAATGTCGAAGATGCATGTGAAGAGTTTG
AATAAANTTGTTTCATGAAATGAGAGGGAAAAAAGCAATATTTCTAAATT
AATATATTTTANATGTGATTTTAAATGTATNTNTAAATATACTAAATTAA
TAAATTAAACGTAAGTAGATATTTGACTATTTCATCTACATCCACCGAAA
TTTATATATTCAAGT
>rnd-5_family-976#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
GGGAGGGGAAGANTTAAAGCAGCTGGCCTGCGATCNATTCACNTCCTTTA
CCGGGAAGGGGNTGGGAGAGAAGGCAGGTGACCCAGTCTAATCTCCTTGT
NAACAATGATAGACCTCTTGGTAAACAGACTAATGATATTTGCTAGCGGG
AGAGTCCTTATCTACGGAATGCTCTTAGCAGGATGTCCTGCTGCTAGGAT
TGCTTATGGTAAACAAACCCGGAATCTATGGATTTATGAGGNATGGCTCC
CTGGAGAATGTCACGTAAGCTACGTAACTATCNGGGTATAAAATGGAGAT
GTTTCATGACCTAAATGCTCCTGCTGTGAGGTGATACCTAAANCCTCACT
TAGAGACCTCATTTACTCTGGGCCAGAGAGTACGTGTCTGATGCGGNAAG
GAAGGACCTGGGAGCCATGGAGAGTCCCGGATCTCTCCTGCTTCGCCTGT
GCCTCNTGATTGCTNTATCCTTGAAATTATTAGTAAAGCTTGATACTGGG
TAAGATCTCTGATTCNTGTGAGTCTGATTTGACAATNCGATCCTTTGTGT
TANCTCACAAATAAAAGATGANNCTATCAAAAATAATTACAATCTTAGAA
TAACAATAGTATTAATACTATTACTTTAGTAGAATAAGTGAAT
>rnd-5_family-1392#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AGTCACCAAGATGGCGACATAGGTCGTTCCTGACTTCGCTCCCCCTCACA
AGAAGAACAACTAACAACTATTCATGGACAAGACACCACTGAGAAAATCC
TAGAACACGGGGTGAGGCTGAAGCACCCCCCTGCACCACAGAGACCAAGA
CAGACCGCATTAGAAGGGTAAGAGGAGCGGCTACATGCTGACCACATTGC
CCCTCCCCCAGGCCGGCGCAGCACCACGCCGAGAGGTCTCCCCTGAGCCT
ACGGTTCCTCCAGTGGGAAAAGAGANCCCAGGGTGGACATCCAGCTCCCC
CAGCATTGTGGGTCGCTTCNTGGGAGCCCCCACTCTGGTCTCGTCCCACA
GGGATTGCGGGGGAATCTGCGGGGCTCGACCACTGGGAATCTGATCGTGA
CGGAGAAGGGGGGAGGGGCTTGCAACAACCAGCACTTGGATCTTGGCAGA
CCAAGTTCCTACCTGCAGCGCCCAGGTAGTAGTCCCAACCAGCGGCTTTG
CTCATCTGCAGAGCCAAGCGGTGGCGCAGTCTGACCAGGGAACTCGGCGG
GGTGCAGGTCTGCCTGATTCGGGTCCTCAAACGAGGAGCTTTGCCGGCCC
TGGAGCCTGGTCTGCCCCCGCCCAGGCAGGGGAGCTGAGTCATAGCCCCA
CCTACTGCTGAGCGTAGCTCCCAGCCCCATCTGACCAGAAGGGCTGGCGA
GAACACCTGGAAGCTGCGTAGCCCAGCAGCGCTCNAGCCGAGAGNCGGGC
GGGCAGAGCTGATCACCCGCAGAGCAAAGCCAGTGGCGCTCAGCCAGAGG
ACTCGGCGGGCGGGGCTGATCAGCCCACGAAGCAAAGCCAGTGCCGGGCN
TGGAGGGTTCCCTTGCTACGCCCGGGCAGGGGAGCTAATTCATAGCCCNA
CCTGCTGAGGATAGCTCCNGGACCCTCANNACCAGAGAGCCTGATCCGGA
GTANCCGAGAGCCTTGGAGCCGGTCCTCCCGCTCCGCCCAGGCAGGGGAG
CTGATTCATAGCCCCACCCGCTGCTGAGTGTANCTCCCAGCCCCGCCTGA
CCAGAAAGNCTGGCCAGAACACCTGGAAGCTGTATAGCCCAGCGACGCTC
GAGCGGAGAGTCCGGCAGGCGGAGCCGACCGTCTGCAGAGCAAAGCCAGT
GGCCCCGTTCGGCCAGGGAACTTGGGGCGTGGGTCGGCTTGAGTCAAGAC
CACAAACAAAGAGCCTTACCGGCCTTGGAGCTGCTTCTCCNGCTGCCCAG
GCAGGGAAACTAATTCGTAGCCCCGCCCATTGCTGAATACAGCCTTCAGC
CTGCCCGACCAGGGAACCTAACCAGAGCACACGGGAAGCTGCGTAGCCCA
TCCAACAGCCCTGCNTACAGTGGCACTTGAACAGAGAGCACAGCCCGTGG
CTTCCCCGTCTGCAGAGCAAAACCAGTGGCCTCGTCTGACCAGGGAATTC
GGTGCACAGTCTTGCCTGATTTGGGTCCCCAAACAATGAGCCGTATAGGC
CCTGGGTGCTGTCCTGCTGCCCCGCCAGGGCAGGGAAGCTAATTCATAGC
CCCACCTACTGCTGAATATAGTACCCAGTCCTGACCATCTAGNAAGCCTG
ACCAGAGAACCCAGACAACCGCGGAGCCCATCCTACAGCCTCACTTGGNC
AGGGAACCAAGCCAGCAGTCCTATCCAACTGTTCTCAGCCAGTGGCACCC
CCACCCAACCTCAGAGCTCGGACAGTGGCCTCGCCCCAAAATAGACCCTG
ATAGCAGGCCCCACCTGCCCAAGGACATTACCAGCAGACATATCCAGAAA
CCCAAACTGAGCTGACTGGTGAAGAACTGTCTCTGCCAAAGCGAACCTGT
AAAGTCTGGAAGAGGAGACNACTTACTCAAATGCACAGATACCAACGTAA
GGAATCAAGGATCACAAAAAATCAGGTAAACACGACACCNTCAAAGGGAA
CTAATAAANCTCCAATAACCGNCCTAAAGAAATGGAGATCTTGACTTCAA
GAATTCAGAATAACTCTGTTCTTAGAGAAGTTTAGTGAACTACAGAAACA
TAGGCAGGCAAATGAAATCAGGGNAACAGNGCGTGAACAAAATGAAAATA
TATCAACAAAGAAACGNAAACNATAANAAAANAACTAAACAACAATTAAC
CCTAGAGCTGAAGAATACAATGANCGAACTGAAGAATTCAATAGAGAGCT
TCAACAGCAGACTCGATCANGCAGAAGAAAGAATTAGTAAACTNGAAGAC
GGGTCATTTGAAATCATTCAGTCAGAGGAGCAAAAANAA
>rnd-5_family-818#LTR/ERVL-MaLR ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAATGTGANAGACACTATTAAGTGCCTACCCAGCTNCCATTCTTTTCCTC
TTTGCTGGCAGAGCCCCGATTTTGTCTAGATACCTCCCCCTCCCTACAGG
ACTCCGGGTGAATCTGATTGGTNTAAGTCCATGATGGTAATCCCATTCCC
CTTGCCAGTGATTGGTCCAAGAATGGGCATGTGACCCAGTTCTGGCCAAT
GAGTTATGAGGGGAAGTCTGCTGGGGGACTTAAGGGAAAAGNTTCTTCAC
TCCNAANAAAGANNCCCAAGAGAGAGATCCTTTCTCTTCTAGAACGTTGT
CATGTCTGGATGTGGCNCCTGGAACTGCAGCCGTCCTNTTGCGAGCTGAG
GGGAGCTAATCCAACACTGAAGAGGGCGGATTGGAAAGAT
>rnd-5_family-852#LTR/ERVL-MaLR ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
GACCACCCNGTNTCCGCTTGGGAAATCACCCTTCTTTCACTCTCAGTCCA
TGTGGTTCGAGAGAACTGGCTTTCCGACCCTCCCTCCTAGCCACATGATT
GGTTCNAGGATGGGCACGTGACCCAGGCCCGGCCAATCAGAGTACCGCAC
TCCCTGGCCACAGTGATTGGTTCAAGGATGGGCACGTGACCCAGGCCTGG
CCAGTCAGAGTACTCTGACTCCCTGGCTACAGTGACTGGTTCAGGAATGG
TCCTATGACCCAAGCNAGGCCAATCAGTGATCCCCGAGCTTCGGCTGGAG
CTATCAGGNAAGAGGCTCTCTTTTGACTGTGATCCTTAGCTCTATAGATA
ATTTAAGATAAGAATGACCATCTTTACCTCCACTAAACTTTCTTGAAAAT
GAAGACGACACAGAAGAAAGTGGAG
>rnd-5_family-1514#DNA/hAT-Tip100 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
TGGCAGGGCCGCCGTGTACAGCTGCACAGGCTGTGCACTGCACAACTCCA
GGGGNCGCCANTCACACCGCGGTCTGTGTAATGGCGCCCCCTGGAGTTGT
GCAGTGCACGGCCCGCGCGGCTGAATCGGTGGGCC
>rnd-5_family-1216#LINE/L1 ( Recon Family Size = 46, Final Multiple Alignment Size = 16 )
TGTGGAGTAGGAGACCCCAGCCTCCGTTCCCCGACAAAGATCAACAATTG
GACAGCTATCCACGAACAAAAACAGCTCTGGGAGAGCTCCGGAGTCCACT
TAAGAAACTTCAGCAACACAGTGGAACAAAAAACCTGAGAATAACCACAC
AANAAGGGAAGGAAGACAGCTTCATTTTGTCTGCATCATCCCATCCCCCA
AGCCAGCGCTGCTCAGCGCCAAGANGGAACTCCCCAGCTAGAAAGAGTTT
CCCTCACCGGGAAAGGAAGAGCGGGGTGAGCGACCAGCTTCCCCAGCCTT
TCGGGGCACCACGTAAAGGACCCGCTTCGGTTTCACCCCACCCAGAGACC
GGCAAAGCTGAGATGTATAGAGNTGGCTAGGAACAAGGAAGAAAAGCAGG
GGCTACCAGTANCAGCCACGCAGCGGGAGCGACCGCGGTTCNCAGTGACC
TGCTCCGCAGACGACCCCGGAACATTTCGCCACTGAAGAAGCCAANGGCC
AGCACAGCCGCTGCGGACCCCCTGCAGATTTCACCAGCTTTTGCCCCACG
GGTATTCGCATTTGCTGACGCCAGCCGCCTGAGTCCCTCCCCGCTTTCTC
CCCTCCTTGCCCCCGCTGGAGCCCGGGANCCACACCGGCAGCCATCCGAG
GCCTCTGCGGCTGCGTGAGTGCAAGACGCCAGCCTGGACTCCNCAAGCCG
ACCCCCACCGCCGTGCNCACCGCTCGCGGCTAGCCCCTCCAGCTGCGCAC
CTGCACGCCGCCGGCCCGACTCTTGTCACCAACCTCCACTGCCGTGTGCA
CGCCCGGGNNGAGACCGTGCAGCCACAGGNAGCGCGCCGGCAGCCAGGGC
CCGCGTAGCTGCTTGTGGGCCCGGATCCGGCCCTGTCTCCTGTCACTGGC
CTGCACCACTGNGCTCACCTGCAGCTAGCCCCNCCAGCTGTGCACCTGCA
CGCCCCTGGCCCGACCCCCGTCACTGGCCTCCACTGCCGTGCGCACCCGT
GGCGAGACCGTGCAGCCACAGGAGCGCACGNCGACAGCCAGGGCCCCTGC
AGCTGTGCCCCGGTCGGCCCTGGCCCTTGCCGCTGGCCCTGGCCCACTCT
GTGTCTGCAACTGCCCCTGCCACTACACGGGCACCTGCAGCCGGCCCCCG
CAGCCGAGCGCGTGCACGCCACTGGCTCTGGCCACCACCGCCGCCTGCCC
TGGTCCCTAGCTGCTGGACCTGGAGGCGCCGCTGAGGACCCCANCAGCCC
TTGCAGCCACTGCGGACCCCCCGCAGCNCTCGCCAAGGACCACGCAGTTG
TCGATGNCGTGGACCCCAGTGGCCTGAGCCAATGAGACACCACGCCCCCC
GGACCAGGAGCCGCCACACGCCCCCGCACTTGGCACCCTGCACCACTAGA
CTCGGGACCACAGAATGCTCCAGCATGCCCCCACTCGCAGGTGAAAGTCT
TTCCTTACCAAAGTCAGTCCATAAAGTCTGGAAGAGGTGACTGCTTCTTC
AAATGCACAGACACCTACGCAAGGNTACAGGGATCATGAAGAATCAGGGA
AATATGACACNACCAAAGGAACANAACAAACTTNCAGTAACTGACCCCAA
AGAAATGGAGATCCACGAATTGCCTGACAAAGAATTCAAAATAATTGTTC
TAAAGATGCTCAGAGAGCTGCAAGAGAACATGNATGAACAATTTAGTGAG
ATCAGGAAAATAATACAAGAACAAAATAAGAAGTTCAACGAAGAGATAGA
AAACAT
>rnd-5_family-1289#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AAGACATTGAATCCATNAGACAAAANCAGGGNGCTATNAAGAAGATTTTT
AAANANCCAGANNAAAAAGAAGAGCTCTTAGAAANNAAAANTGTGACTGC
TGAAANATCAAGAGTATTCAGCAGGAGGGTCAGGAANATCTCCTAGAACA
GTAGAGAAAAAGGAAAAGAAATGAAANATATGGGGGAAANAATTGAGAAG
ANAGANAGAGGGGGTCAGTCCGAGTGGTCCACCACCTAAATAATGGGAAT
TCCAGAAAGAGAGAGAAAGAGGTGGAGGGGAGAAAAAACCGAAGAGATAA
ATTTCCCTGAGCTGAAGAAANACNTGANTTTTCAGATTGAAAGGGCCGCC
AAGTACCAGGATAGATTAAAAACANACTCACACCTAGANATANTCTCATG
AAATTTCAGAACTCAGGAAGCAAAAAGATCCTACAAAAACAGAGAGGGAG
GAGGAGTCATTTTCAAAGGTAATGGATTCACAATAGCTTCTGACTTGTCA
AAAGTAACATCTAAAGCTAATAGAGAATGCCTTAAAAATTCTAATGGCAT
GATTTCGAACNCAGAAATTGATATCNAGGCAAACTANCAGTCAAGNGTGA
CGANAANANGAAGNCATTTCNGACATNCAAGNTCTCANAAGTTTNCCCAG
CACACACACCCTTTCTNGGGAAGCTATCGGAGGACGCGTCTNACCAAAAT
AAGGAGAGAGCCAAGAAAGAGGAAGACGTGGTACAGAAATAAAANAGAGG
TGAAGAACCCCCAAGATNACGGTGAGGAGAATCCAGGATGACAGCTGTAC
ANCANGCTGCAGAGGACNACCAGTCCGACNGNAGTCAGAAAGCTCCAGNA
GGAATTTCTTAATAAAATGATGGAATACCCGAAGTATCTGAATATCTTGA
GAGGAGATTTAGANAACTGGTAGAGAGTTTGAGGNTGAATTAGTGATAAG
NACGTAGAAAACTAAGCGAACANGAAANAAGATAGTTATTAATTCCGGGA
AAACAAAGCGNTGTAGAGGAAAGGAAAAGTAATCATANTATACTACATGG
CTCAGCNGTGAATAGCGTTTACATAGTCATNATAATGTAAACGCTAAATA
TTGATCTAACCAAAGTTATTATATTATTATACTGGGNAGTGAGAAGATAG
TGTATGAGGTGCAGAGGTGGGCAGGTAAGTGAGGACGGCTANATCCTCAT
CTTCATGGGGGGAAGTCAATAGATAATGCCTAAAACAGAAAATAATNTAC
GAANTAAATCACAAGCGTNTTACTTTGNTAAATACCAAAAAAAGAGTANC
TAGAGATTTGAAAGTGGTTGCCTC
>rnd-5_family-1465#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CTAGCAGNAACCTTCTGCAAAAAATATGTGCTTGATTGCATGTACTCCCC
CTTCACCAAAATCACATATAT
>rnd-5_family-343#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
TTNTCTCTGAACCAGTNNCTTCCAGATGCCCGTCTGCAGATNGAGTGCTG
GTNTATGATGNNATTTTCATTGGTCCGTGGCGAAATGAGAAAGAAAAATG
AGAACNANAGTGAGTTTTTCATNAAGCTAAGTTTATTCAATTTAAAGGAC
TGTCCTTTATCCTGAGGCAATGTCCTTCCTTTTGNTGTTAAAATGTCCTT
TCTTTTATGAAATGATNGTGANAGTAGATGGCATTTTCTTTTAATNNTCT
CACTTGGCAAT
>rnd-5_family-163#LINE/L2 ( Recon Family Size = 25, Final Multiple Alignment Size = 16 )
CCCCTGTATCTAATTCGTCACCTAGCCTGGCTAATTCTACCTCTCGAAGT
ATCGTTNATTCTTCTTCTNTGTCTCCAACCGCTGCCCTAGTTCAGGNCTT
CATCATCTCTGGCCTATGGCCGCACCTCCTAACTGGTCTCCCACTTTCTT
CCCTCCAATCCATCTTCCACACTGCTGCCAAGTGATCTTTCTAAAATGCA
AATCTGATCATGTCACTCTTCCTCCTGAAACCTTTTAAGAGCAGGTCTCT
AGTCCCNAGGGCAAAAGTNCAACCTCAAACGCCTACAGAGGTCGTCNAGG
AGAATGACT
>rnd-5_family-1878#LTR/ERVL-MaLR ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AGAGAACANCTGTCACCCCTTTGGGCCANNCAGCACCTGCACCCCTTTCC
TATGTTTGAGGANTTCCCTGNTTGNTGAGGCAGAGCCTGCCTCCCATACA
GAAGNTGAAAATGCAACAGATNCNCGTTNTCCCAGCCTCTCTCGAGCTAG
GGCGCGGNCACGTGACCTCAGTCTCCACCCCTAGACCGTGACGCGAGGAA
GCNCAGAGCAGTGCAGGCTGCCTACCCTGNNGTGGGTGGTGGCNGCTAAT
GGTGGCAGCTAGCCACCATCGTTTCCAGAGGCTCCGGTGGTGGCAGTTCT
GGAAGCGGCTCCAGNGCCGGTGGNGGCAGCGGCACAAGTATAGCACCAGT
TNGCGGCAGCAGCAGTGGGGCTTCCCGGGGCCAGCTCGGTATGACTTGGG
GCATTGTCCCTGGCTGCTCTGCCCTTGGTTCTCTGACCCTNCAGGAGATT
CTNTGAGCTGCCCAATGTCCTTTNAATAAATCCCTTTTCTGCTTAAATTA
GCAGAGTTGGCTTCTGNTGCTTGCAA
>rnd-5_family-890#DNA/hAT-Tip100 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CAGGGCCGGCTTCATGGGCGTGTGACCTGTGCAGTCGCACAGGGCCCCGC
GCTTAGAAGGGCCCCGCGCTTGGTTTAATGCTCTGCTGTCGCCGTCTTGA
AACTCGATAANTTTTGAACAAGGGGCCCCGCATTTTCATTTTGCACTGGG
CCCCACAAATTATGT
>rnd-5_family-26#LTR/ERVL ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
ATCAACTTGGTTAAGCTGGGNACTACATTTCCCAGAATTCCCTTCCTTAT
GGTTCCNGGTTAGAGTTGGCCGAAAGAGGAACTTGNATGAATTTGGAAGG
TAGAAGNGAAGNAGTAGATCATGGTCAGACGCAGAACNCGGCGGGTCCCA
GCTCGTTCTCCGCTCTNCGTCCAGCTCNTCTTCCCGACTGCCGCCCTGCT
GACCAACAGCGGCCCCAGGCCCACCATGCTTGGCTGCGGACCCACAGAGG
CGGTAGCTNCNCAGAGGCAACAGCTTTCCATAGACTTCCCACGAGCTCCC
CCTTCGTGGCCCCACTNCGGCGNCTGGATGCTTGGCTTCTCAGATTTCCC
TGCAAGCTCCGACTGTCCACCCGCGCCAGTGCTTCAGGNGGACTGATTAG
TGACTTTTTCTCTGATCCTCCGACTCCCCTTCCAGACTTCGCTTCCCCAG
CTCCTCCCACANTTGTGTAAGGTCTGATTCCTATAATAAATCCCTTATTC
CATAATACTCATAGTGGCTCTGCTTCCCTGACTGA
>rnd-5_family-697#LINE/L2 ( Recon Family Size = 26, Final Multiple Alignment Size = 16 )
TGGTCCCTGNTCNCCTCACCANCCTCACTCATCCTCCTCCACGTACACCT
TTCTTCCCCTTGTGCCAAAAACTTTAGCTGTCCTTGTCTTTTCTCATTGC
CCCTTCTCACCTCTGAGCCTTCGCACATGCTNTTCCCTCTGCCTGGAACA
TCTTTCCCACNCTTCCCCTGGATTAGCCAACTCGTCCTTCAGGTCTCAGC
NTAGATGTCACTTCCTCGGGGAAGCCTTCCCTGAGCCCCCTCATTTAAAT
A
>rnd-5_family-1507#SINE/tRNA ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
CATTCATTCATTTACTCATTCATCACCAACACACGTATACTGAGCACCTA
CTGTGTGCCAGGCGCTGGGCTAGGCCCCGGGGCATAGCAGNGGACAAAGT
CCCTGCCCTTNNGGAACTNACATTCAAGTGNAGTAGACAATAGCAGGTAA
ATAAATAAATAAGACATTCTGAATAGCGCTAAAAAGAAAATAAAACAGGG
ACTTCCCTGGTGGTCCAGTGGGTAAGACTGTGCCCTCCCAATGCAGGGGG
CCTGGGTTTGATCCCTGGTCGGGGAGCTAGATCCNGCACGCATGCCANAA
CCAAGAGTCCGCATGCCGCAACTGAAGATCCTGCATGCCGCAACTAAGAC
CTGGCACAGCCTAAATAAATAAATAAATAATAAGTAAATAATTTTAAAAA
ACAGGGAAATGGAAGAGAGAGCAGCCACAGGTGTATGTGAGTGTGAAAAA
TGTATAGCAAGAGAGGG
>rnd-5_family-1166#LTR/ERVL-MaLR ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
TTTTTGATTTATATTATAGAAGTATAGTTGATTTACAATGTTATGTAGTT
TCCCCTTTCTTTATAAAGGAACTGCCGTATTTTAGCTGGGCACATCCGCC
CAGCTAGAAAANATATTTCCCAGTCTCCCTTGCAACTAGGTGNGGCCATG
TGACTAAGTTCTAGCCAANGGGATGTGAGCGGAAGTGATGCGTGCCACTT
CCGGGTCTCGCCCTTAAAAGNATTGGGCTTGCNCTCCCCTTNCTCTTCCC
CTTCTCGCTGGCTGGGAGATGGTGANACNAGAGCAGCCGCCTNGGACCCA
GAGATGGAAGAGCCACGTCGAGGGTGGGCAGAGCCGCCCTNCCAGCCCTG
GACCACCTACCTCTTACCTGTAAGAGAGAGAAACTANCTTGTTTGAGCCA
CTGTATTTTGGTA
>rnd-5_family-1560#LTR/ERVL ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
TGAGAGTTTAGCTAAGCTACTCCATGGTATTGCTGCCTCGGCATCCGTTT
TGTTTGGCCAAGCGGCCTGCAGGGGCCTTAAACTGACACTAGCCCCTCGT
GCAAGCGCATGCCCTAGATAACAGCCCGCAGAGTCACAAGCAAATGTAAG
TTCCTGATATGACTTCCCCAACAGCCCTTGTGATCAACAGTCTCCCCGCC
TCCCAGGGCCTTCCCCTTGTGCGCCCTTAGATAAGACCCCCGCGGAGCTT
ACCAAAACCCCGCTCTTTTGGTTTGAATTGACCAATCCGGCCTTAGCCCG
GGAACCCCAAAGCACTCCACCCGCGGACCCTAATAAAGGCATGCGCCCCA
GGTCCTGCCTCTCTGCCTGCACCCTGCCTTGACCTCCCCGCGTGGCCCCT
CGAGGTGTGCCGCGCTTCCTCCAGGACCTGTGAGTAATAAACTTCTCTAT
TTCAATTTCTCTTGTGGTCTNTTGTTGAACCGCGGCTCACCGTCCGGCAC
CCTGTGCTCTACTTAACAAATGTTAATTTAACAAA
>rnd-5_family-780#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TCAGNATGGCAGACCAGGTACCCTGAACAAAATTTCTGTAAAAAAACAAC
NTAAAATGNTTNGCAAACTAGCAAGAAAGTAAAAAATACTCAAGTCAGAA
ACCAAGGAATNCAGAGAGGTAAGCNGAGAACCAAAGCTGGCTTTCACCTT
GAGGCATATTGTCACCAGGTGAACTTGAGCTTCGGTNTTCATAAGNTCAG
GAGGTAAGGGGACGGAAGACAAANTCCAGGNCCGCCCAAGGTGGGGNGTC
TAATAAATCCCTCTACTCAAACTGGGACCCACAAGAGNTAAGACGACCTC
GGTNAAAGGGTGAACCAGAAGTCANTCCACTCCCCCAGGAGGCTGCAAGG
AAAATTGCCCGTCTTNAACCTTGGCGCTGGGCGAGGAAGGGGAANATANT
CCCTGAGAATTCTGAACCACAAGCTAGCCCTCATGTAGTTTCAGCCCGAA
TTCACACTACCTGGGTGGTCCGAAAAACTACAAGCCATTTAGATTAAAGT
GGTCCTAGGCTAGTAATGCCNCCAGGTAGCCTGAAGAAAGAAAAGCAAAT
CCTCTCTGGAGGACNCACCTTCATCTCAGGCCTCAAAGAATTCTCACAGA
NAAAATTCCAAGAAANATGAGTACGCAGTNAAAAATCCA
>rnd-5_family-243#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 15 )
AGGGGAGAAAAGNCAAACTATGGGCAATGGGNAAGAAGAGACGAGAAAAT
AAGGAGATCGTACTGGCAATGTTCACTGCAGCANTATTTACAATAGCCAA
GACGTGGAAGCAACCTAAGTGTCCATCAACAGATGAATGGATAAAGAAGA
TGTGGCACATATATACAATGGAATATTACTCGGCCATAAAAAGAAATGAA
ATNNNGCCATTTGCAGCGACGTGGATGGACCTAGAGANCGTCATACNGAG
TGAAGTAAGTCAGAAAGAGAAAGACAAATACCGTATGNTANCACTTATAT
ATGGAATCTAAAAAAAGAAAAAACGGTTCTGATGAACGTAGGGGCAGGAC
AGGAATAAAGACACAGATATAGAGAATGGACTTGAGGACGCGGGGAGGGG
GAAGGGTAAGCTGGGACGAAGTGAGAGAGTGGCATTGACATATATACACT
ACCAAATGTAAAATAGATAGCTAGTGGGAAGCAGCCGCATAGCACAGGGA
GATCAGCTCGGTGCTTTGTGACCACCTAGAGGGGTGGGATAGGGAGGGTG
GGAGGGAGACGCAAGAGGGAGGAGATATGGGGACATATGTATATGTATAA
CTGATTCACTTTGTTATACAGCAGAAACTAACACACCATTGTAAAGCAAT
TATACTCCAATAAAGATGTTTAAAAAAAGAAAAAGAAAATAAANAAATCA
GCACAAGAAATCCAATGTCCAACCAATTGGAGCGCCATTCA
>rnd-5_family-946#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TTAAAGGGACAAGCAGCCAAACCTCCGTCATGGTNCAAAGGGATATTTCC
CCAAATGATAACTAGGAAAACTGGCTAGAGAAGCCCACAGTTGGCCTCAG
AAAAAGAAAAACAAGATTGTTAATTCAACAATTGNTGGTTTGATAAAAAG
AGAAAGCTCTGGTTTGGACCAAATAACAACCCAGTTCTACCGGAGACTCT
AAAATTCCCACTCCTCACCACTGNACATGCATTAAGCCACTGGTCTACTG
ACAAAACGATAGCCTTCATGAATCAATATTGGTGGGAAAACATTAACAAG
GCCGCAGAAAAAGCGCCTACCTCACTTGTCCCACTTGTCCAAAGTACAAC
CCAGGGAAGCCTGTTCGTACTGCTCCCGGACATTTTAAACTGCCTAATGG
ACCATCTGCAAGGTCTGGCAAATGGATTTCATACAACTTCGGATTAATGT
CTTATCTGCAAGGTCTGGCAAATGGATTTCATACAACTTCCTCCATCTCA
TGGATATAAATATGTTTTAGTCATGGTCTGTATGTTTTCACACTGGACTG
AAGCCTTCCCTTGCAGACAGGCTACTGCCTCTTCTGTGGCTAAAGTCTTT
TTGGAAAANATTATCCCTACCTGGGGAACTCCTCTCGAACTTCATAGTGA
TCGAGGNACCCATTTTACTGGCCAGGTGCTTCGACAAGTCTGTGNTGTTT
GGCTGTTTTACAACAGTTTCACTGCGCTTATCACCCTCAATCTTCTGGTT
TAGTCGAACACGCTAATGGCATTATTAAGACTCAATTGGCAAAATTTGTA
GAGGCCCTCCAAATACCTTGGCCAAAAGCATTGCCGTTGGTCCTTCTAAA
TCTCAGATCCACCCCTTTTGGAACTCATAAACTCTCACCCTTTGAGATAG
TCACAGGACGCCCGATGCACTTGGCTCCTGCTTCTTTTGACCCACAACTG
ATAAAAGGAGAGATACTCCAATATTGCAAAGGCCTAATTGCTTCTATTAA
AAATAACCATGTTTCAGTAGAGCAATCTTTTCACAGTGCGCCCTCGGGAG
ACGAAGACCTTAAGCATCACACCTTGCAACCTGGAGATTTCGTCNACTGG
AAAAGACACCTCCGGAAGAACTCTCTTCAACCTCGCTGGAAAGGCCCCTA
TCAGGTACTGCTAACCAACCCTTNTGCTGCCAAACTCCAAGGAATAGACT
CTTGGATTCACGTGACACACCTAAAGAAAGCACCGAACCCTGACTGGACC
TGCACATCATCTGGTGACCTGAAAGTAAAGATTTCCCGGAATTGAAGCAG
ACGACATCTGATGAGACAGCTTTCCCAAGATATCCGGACCAGGCCTGTTG
GAAGTTTGTCGCCAAACCTTTGATGATGACATAACGCTTCAGATGATCTC
CAATGTTTATGATCTTGGTAACATATGGACTTTAGATAAAAAGTGCCTGA
GAGTTCTCCCTCCTACCCCTCCTTNTTACTCGAATGTGACCTTAATAGGT
TTCCAGTCTGTGCACTTTCCCTCCGACGTGAGACAATACACCCAGGAAAG
GTCCTTCCTGACATTGAGGGACAAAAAGCCGCTGAAACTAGAAAACCTGA
CTCTTGATCAGCAATGCTTTCAGAGAAAGATCTTGATCAAAAGGGGGAAA
TGTAAA
>rnd-5_family-151#LTR/ERVL-MaLR ( Recon Family Size = 22, Final Multiple Alignment Size = 15 )
CATTTCTNTCTCTGGGGGAAGTCAGCCGCCATGNAAGAAGTCTGACTACC
CTGAGACCGCCATGCTGTGAGGAAGCCCAAGCTAGCCGCGTGGAGAGGCC
GTGGAAGGGAGAGAGATATTGAAGAAGCCCCAGCTGTNCCAGCCACTGAG
CCCAGGCGCCAGACATGTGAGTGAACGAGCCATCTTGGACATTTCAGTCC
CAGCACATGCAACTGGAGAAGAACCAAGGAGCCCATTTGACAGCCAGAAC
NGNCGNCCCAGACAGA
>rnd-5_family-1627#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGAGGCAGGAGATAGATGGGCCCCGGGCTGGACAGCTGGAGTTTGTCCCC
TGTGGACAGATACTCCAAGATGAAGACAATAGCAGGTGGGAGGAGAAGCT
GAGCCCTGCCCAGGTAAAGAGATAGAGACCACACATTCCTCATTCTCGAG
GTCAAGGAGACCTTCCCGACTACACGTGCGCAGAAAGGCTCCTTGGGGGT
CAAAAGGGAGGGGGCGCCACCCCATAGTAGGTGACGTCGACCTACCCATA
GGCCTCTNCGCTGGGATCCATCTTGGCTAAGAGATGCGCGCGCGCACACA
TGGGAGGGCCCTGAGACAAACCAAATACGGACCAGAACCAGGCAAAGCAA
GATGATTGGCCAAAGGAAACCCGGAAGAAATGCCCCATATAAGTGATTCA
AACTACCACGAGGGCGCCGACTCTTTCTCTGAGCCCGCCCGTGTGTCTAT
CCGCACGTACTCTTCTTCCTCCTAATAAACACTTTACTTGTTTCACTACT
TTCCGTCTCTTTGTGGAAATTCATTTCTACAAAGCNGACGGGCCAGGGCC
TTGTCACTGGCCA
>rnd-5_family-1655#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
ACAGGGGAACGGCTCCGCCACGGCGCCCTGGCGACCTTGCACGTNTCCAC
ATAGGCCACGTAGGCAAGGCTTGACCGCAGTCTGATCTGAGTCTTGGCAG
AATGCCCCGTGATTCCTTCGAACACGAGAGGACGGGCGGCTTGTGAGGAG
CTGCCGCGAGGCCGTCTCTCCCCTATCCTNTGGGAGGCTGCCACGAGGCG
GTTTCTCATCGCCTCCCTAGTTTCTAGTTCGGCACGAGGCTTTCTGCCTC
GCTCCCACTTAGGGTAGAGCTGCAGGCTTCATCGTAAGCTATAGGACTCC
TCAGCGGCAGAGTGTCCCACTACTCGTGCCGTNTGTCATCTGGCCCCTTC
GNTTCGGTGTCGTCCGTGGNACAAGGGGCACGGGGAGCTGGCACCACANT
GGCTTGCTTTCGCTGTCTGTGTAAGTAATAAACTGTCTGAATCNAAAAGG
GGTCGTTGTTTCTTTACCGGCCAAA
>rnd-5_family-3019#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CTGTCCAATAGAACTTTCTGCGATGATGGAAATGTTCTANAGCTGTGCTG
TCCAATACGGTAGCCACTAGCCACGTGTGGCTATTAGCCCTTGAAATGTG
GCCAGTGCGACTGAGGAANTGAATTTTTAATTAATTTCACTAAAATTGAC
ATTTAAATAGCCACACGTGGCTGGTGGCTACTGTGGAA
>rnd-5_family-79#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GGCTTCTGCTTGGGATGTAGAAAGCTGGAAAGAGCATCGCTCCCACCCTC
ACAACAAAAAACGCCGGATAATCTACAAANTCATAACTTTTCTTGAACCC
ATNAGAGAGCTGAGGTCGCAGGGCAAACAACTAGCCCGAAATCTAAGGAA
ANACAGGTGCCTNCAGGGAGAGACGGGACGTGAGCGCTTGTTCACCTGGG
TCAGATGCAGGCGGACATGAAGGAGAATTCAGCTAAANTNTTTAACGAAT
TGNTGAAGGCCGAGTGTGGGCGCAGACACTGTGAGAGTATAGAAGCCCTC
GGACCGCAGACACAGGGGAGTTCGCACTCNCTCNCAGGCTCTTCTCCATA
GACTCCAATCCAGTGCTCAGAAAAAGATTGGGCAGGCGGGAGNCCAGAGA
AGCGTCCCCTCGTGGTGCAGGCCTGGGGGAGGAGAGGTNGCNACCGCGGG
AAAGGCGCGAAGCCCCACCCGGANTCTCCTCTCCCATCTTTGGAACAAAA
GCCTTAAGTTGCTGGGGGAAGGCAGCAAACCCTGTCTTCCCCAGGGCACT
GGTGAAGACCCACTGCAGCTGGGGGAAGAGAANAGAAAACAAAACAATNT
CCCCTTTGCGAGAGGAGCAGAGACGTCGGGCCCAGANCCGCAGCCGGGAG
AAGGGCAGGATCACTGAGGAACCCANCCCCGAGACCCAGGGACAGTGCCT
GCCTAAGACTGAGGCTNAANCAGAAAACAGAGAACGTCCCCACCTNCCCC
CACCACAGGCTAAGAATCATCAAGTAACGAGTAATANGAACACCGCTGGG
AGAGGGGCAAGAGCGTGGAGAGAGACCCTCTCTGAGGCACGGCACAAAGG
GAAGGCCTAAANCTNAGNGTGGAATGGGACATTGAGAAAAANCCTCCAGC
AANNCAGCNCCCAACTTAAGCACAGGGTAATGCTAGAGGAATTNGAAGCA
TGTGGTACACTGAGGGTAACCATAGCAACAACGAATTTNAAANCCAGNTC
AACTCCTGACTAGATTAACTCAANCCCCCGAACCAAAGTCGTAGCGGAAA
GAAGCATGCCCATTTCCAGGCATTCAAATTGATTTACNTCAGTCTCNNNT
GTCCTACAC
>rnd-5_family-518#LINE/L2 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CCTGGAGAAAGTGGCAAGGGTTANGTAAGCCACAAGGATCATGTCGTTCC
TCTGCTCAAAATCTTCAGTGGCTCCCCGCTGCCCACAGGATAAAGTCCAA
ACTCCTTAGTNTGGCATTCAAGGCCCTTCACAGCCTGACCCTAACTCCCA
CTGCCTTNTCCGTTGCCCTCCANCCNTTGGTAGTGGTTCTAGTTCCANCT
GCCCAGCACCTTCCAACGGACTTGTCCTGNCGGGCTATGGTGACTGGATG
AGAGGTGGGATCCTGCTCTTCTTGATAGCTCTTCT
>rnd-5_family-1355#DNA/TcMar-Tigger ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
ATACTTTTGGNCTCATGAGGCCCCTAAACGCAAGCCAACTACTTCATCTG
GTGCTCAACCGAAGAAACAGCNATCTGTTCCAACGCTGGAGGAAACTGGC
TGAGCTGGCTTACTGAGAGGTGCTAGGTCTAGATACTGTCCCTATGTGCA
TTCTAAGNGATTTTCAAGGGTGATTTTGACTATACNCGATTTTCACT
>rnd-5_family-652#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
CAGACTGCCTAGGAGGCTTTAGACTTCAACGACGCGGCAGAAAAGCCCCA
AGAAAAGCCTGCTCCCCTAGCCAAAGGACCGGAAAAGGGCGGCCTAACAG
AACAGAAAACCTTTTTGGCAATACCCGCCCTACTCCAGCCAAACACCAAN
GGGAANNCTGCCCCCCACCTCTCCCCCTACCCAGTGGTTTCAGCGGGGCC
GAGCGGGGAGCCGATTTCCATCCACACCCGCCGCGCAGGGTNAGAGCGAC
GGTACTGCATTCCTCCCCGCCCGGTGGTGTCAGCAGGACCGAGCGGGGAG
CCGGTCTTCCATCCCCCGCCCGNCGGAAGCAGGCAGTGCTCCGATTCCCC
CGCCGGGGTAGTGTCGGCCTAACGGGGAGCTNAGTCTNTCCCCTGNCCAA
GGGAAGCAAGGCGCTCCGATTCCCCCGCCAGGGTAGCGTCAGTGGGGTCC
AGTGGGGAGCTGAGCCTCCACCTCCACCCAGCAGGAGCAAGACTTAACGA
AGTGGTGAGGTGGGACTAATGGCATTCTCTGTGCCCACCACCACCATCCT
TGTCCCTGATGTCGNTGGGGCCGGCAGGGAGCTGACTTCCANCCCCATCC
GGCATCAACAAGGGGAATGAAGTGGTGGAGGTGGTACTAGTCTGCACTCT
CTTCTCCCCTNCCGGNGTCAGTGGGGACCGACGGGGAGCTGAACTTCCAC
CCCCACCGGAGGCAACGAGCAACGCGAGTTAGTGCTCCACTTTCACTGGG
AAGGTGTCAGTAGGGTCGAGGGGGAGCTGAACTTCCANTCCANCCGTCTG
CAGTGAGGCGGTGTGAGTCANCCCACTTCTGCTNGGGTGGTGNCAGTAGG
GCCCAGCGGGAAGCTGAACATNTACCCCCACCCAGCCCTGCATGCTACAC
CCCAAAAGGGTGACTNCCT
>rnd-5_family-898#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 15 )
AGCAAGTGATGAGGTGATCATTATCATGGACTTCTCAGCGCTCATTCGAC
TCCGAGATAATTAACAAAGCCAACGGGCAGTCCCATTCCCCTTGCCAGTG
ATTGGTTTAGGAACGGGCATGTGACGCAGTTCTGGCCAATGAGATGNGAA
GGAAAGTCCGTNTGAGGCTTCTGGGAAAGGTTTCCCATCCCAAAAAAGGG
AGATAAAAGTTCNACTTTCTCTGAATTGTTGTGTCTGGATATGA
>rnd-5_family-795#Unknown ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
TGAGGATACCTGTATGAGCTCAGGTATGAAGCTGGGCGACCCTGGCCAAA
CCTTATTCCCCTCCGTGGTAGACGAGACAGTGGCGGGTCCTGAGCTGCCT
GAAGCACACTCCTCGCGCGCACCTTCTCTTTGCTGCCGGAAGGCCTCACA
TGAGAAGTCTGAGTTGACTCGTGACAGAAGAAGTCTGAGTGTACTCGTGT
GAGGCCTGCTGCTCTCAGGTCCTTGCTGGGAGCTTCAGCAGGAGCGCTCT
GGAGCTCGCCGGCAGAAGAATTGTGAGTCCCCCCGCCCCACCCCGGCCTC
AAGCAAAAGTCCAGATTTCCCCCGTTAGNAACACCTCGGAGTGCCANAGG
AGCGGAGGGGCATGCGTTAACGGAATGCTTCAACAGTGCTTGGGATTTCT
TTCACGAGACACTGTGCAC
>rnd-5_family-837#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
GTTNCCCATAAGCCTCACTTCAGGATGCCTGGCCCCCCACCTGTTCCTTA
AAAAGNTGGGTCACCCTCACNGCTCCTCCAGGTCTTTGCACCCTCACATT
CCCTGTTTCCAGCGAACTCCTACNCATCCTTCAAGGCCCAGCTCAGACGT
CACCTCCTCCAGGAAGCCTTCCCTGACCACCCCAGCTGGGTCTGGCGCCT
CCTCTGGGCTCCCACATCNCCTGTCCTGACCCAACACCAGAGCTNGCCAC
ACACGTGCCTTTTTGTAAATGCCTCTTG
>rnd-5_family-377#SINE/MIR ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
TCAAAGGAGATAATGTCTGTAAATTGCTCAGCACAGTTCCTGGCACAGAG
TAACTCTCGATAAATACTANTTCTCTGCTGCTCCAACTGTGTGTGTGTGC
GTGCGCACGCACGCACACACACGCGCACACACACCCTGTAATACTAACCC
TACAATACCAGACCCATAAG
>rnd-6_family-25#LINE/L1 ( Recon Family Size = 442, Final Multiple Alignment Size = 259 )
TAAGACCCAGCTCCACCCAACGGCCAGCAAGCTCCAGTGCTGGACGCCCC
ATGCCAAACAACTAGCAAGACAGGAACACAACCCCACCCATTAGCAGAGA
GGCTGCCTAAAATCNTACTAAGTCCACAGACACCCCAAAACACACCACCG
GACGCGGCCCTGCCCACCAGAAAGACAAGATCCAGCCCCACCCACCAGAA
CACAGGCACCAGTCCCCTCCACCAGGAAGCCTACACAACCCACTGAACCA
ACCTTANCCACCGGGGGCAGACACCAGAAGCAACGGGAACTACGAACCTG
CAGCCTGCGAAAAGGAGACCCCAAACACAGNAAGNTAAGCAAAATGAGAA
GACAGAGAAACACGCAGCAGATGAAGGAGCAAGGTAAAAACCCANCAGAC
CAAACAAATGAAGAGGAAATAGGCAGTCTACCTGAAAAAGAATTCAGAGT
AATGATAGTAAAGATGATCCAAAATCTTGGAAANAGAATGGAGAAAATGC
AAGAAACGTTTAACAAGGACCTAGAAGAACTAAAGAGCAAACAAACAACG
ATGAACAACACAATAAATGAAATTAAAAATACTCTAGAAGGAATCAATAG
CAGAATAACTGAGGCAGAAGAACGGATAAGTGACCTGGAAGATAAAATAG
TGGAAATAACTGCCGCGGAGCAGAATAAAGAAAAAAGAATGAAAAGAANT
GAGGACAGTCTCAGAGACCTCTGGGACAACATTAAACGCACCAACATTCG
AATTATAGGGGTCCCAGAAGAAGAGAAAAAGAAAGGGNCCGAGAAAATAT
TTGAAGAGATTATAGTTGAAAACTTCCCTAACATGGGAAAGGAAATAGTC
AATCAAGTCCAGGAAGCGCAGAGAGTCCCATACAGGATAAATCCAAGGAG
AAACACGCCAAGACACATATTAATCAAACTGTCAAAAATTAAATACAAAG
AAAAAATATTAAAAGCAGCAAGGGAAAAGCGACAAATAACATACAAGGGA
ATCCCCATAAGGTTAACAGCTGATCTTTCAGCAGAAACTCTGCAAGCCAG
AAGGGAGTGGCAGGACATATTTAAAGTGATGAAAGGGAAAAACCTACAAC
CAAGATTACTCTACCCAGCAAGGATCTCATTCAGATTCGATGGAGAAATT
AAAANCTTTACAGACAAGCAAAAGCTAAGAGAATTCAGCACCACCAAACC
AGCTTTACAACAAATGCTAAAGGAACTTCTCTAGGCGGGAAACACAAGAG
AAGGAAAAGACCTACAANAACAAACCCAAAACAATTAAGAAAATGGTAAT
AGGAACATACATATCGATAATTACCTTAAATGTAAATGGATTAAATGCTC
CAACCAAAAGACACAGACTGGCTGAATGGATACAAAAACAAGACCCATAT
ATATGCTGTCTACAAGAGACCCACTTCAGACCTAGGGACACATACAGACT
GAAAGTGAGGGGATGGAAAAAGATATTCCATGCAAATGGAAATCAAAAGA
AAGCTGGAGTAGCAATTCTCATATCAGACAAAATAGACTTTAAAATAAAG
ACTATTACAAGAGACAAAGAAGGACACTACATAATGATCAAGGGATCAAT
CCAAGAAGAAGATATAACAATTGTAAATATTTATGCACCCAACATAGGAG
CACCTCAATACATAAGGCAAATGCTAACAGCCATAAAAGGGGAAATCGAC
AGTAACACAATCATAGTAGGGGACTTTAACACCCCACTTTCACCAATGGA
CAGATCATCCAAAATGAAAATAAATAAGGAAACACAAGCTTTAAATGACA
CATTAAACAAGATGGACTTAATTGATATTTATAGGACATTCCATCCAAAA
ACAACAGAATACACTTTCTTCTCAAGTGCTCATGGAACATTCTCCAGGAT
AGAAGATCATATCTTGGGTCACAAATCAAGCCTCGGTAAATTTAAGAAAA
TTGAAATCGTATCAAGTATCTTTTCCGACCACAACGCTATGAGACTAGAT
ATCAATTACAGGAAAAAAACTGTAAAAAACACAAACACATGGAGGCTAAA
CAATACGCTACTAAATAACCAAGAGATCACTGAAGAAATCAAAGAGGAAA
TCAAAAAATACCTAGAAACAAATGACAATGAAAACACGACGACCCAAAAC
CTATGGGATGCAGCAAAAGCAGTTCTAAGAGGGAAGTTTATAGCAATACA
ATCCTACCTCAAGAAACAAGAAANATCTCAAATAAACAACCTAACCTTAC
ACCTAAAGCAATTAGAGAAAGAAGAACAAAAAAACCCCCCCAAAGTTAGC
AGAAGGAAAGAAATCATAAAGATCAGATCAGAAATGAAGGAAACAATAGC
AAAGATCAATAAAACTAAAAGCTGGTTCTTTGAGAAGATAAAATTGATAA
ACCATTAGCCAGACTCATCAAGAAAAAAAGGGAGAAGACTCAAAATCAAT
AGAATTAGAAATGAAAAAGGAGAAGTAACAACNGACACCGCAGAAATACA
AAGGATCATGAGAGATTACTACAAGCAACTCTATGCCAATAAAATGGACA
ACCTGGAAGAAATGGACAAATTCTTAGAAAAGCACAACCTNCCAAGACTG
AACCAGGAAGAAATAGAAAATATGAACAGACCAATCACAAGCACTGAAAT
TGAAACTGTGATTAAAAATCTTCCAACAAACAAAAGCCCAGGACCAGATG
GCTTCACAGGCGAATTCTATCAAACATTTAGAGAAGAGNTAACACCTATC
CTTCTCAAACTCTTCCAAAATATAGCAGAGGGAGGAACACTCCCAAACTC
ATTCTACGAGGCCACCATCACCCTGATACCAAAACCAGACGAAGATGTCA
CAAAAAAAGAAAACTACAGGCCAATATCACTGATGAACATAGATGCAAAA
ATCCTCAACAAAATACTAGCAAACAGAATCCAACAGCACATTAAAAGGAT
CATACACCATGATCAAGTGGGGTTTATCCCAGGAATGCAAGGATTCTTCA
ATATATGCAAATCAATCAATGTGATANACCATATTAACAAATTGAAGGAG
AAAAACCATATGATCATCTCAATAGATGCAGAAAAAGCNTTTGACAAAAT
TCAACACCCATTTATGATAAAAACCCTCCAGAAAGTAGGCATAGAGGGAA
CTTTCCTCAACATAATAAAGGCCATATATGACAAACCCACAGCCAACATC
GTNCTCAATGGTGAAAAACTGAAAGCATTTCCNCTAAGATCAGGAACAAG
ACAAGGNTGCCCACTCTCACCACTATTATTCAACATNGTTTTGGAAGTTT
TAGCCACAGCAATCAGAGAAGAAAAAGAAATAAAAGGAATCCAAATCGGA
AAAGAAGAAGTAAAACTGTCACTGTTTGCAGATGACATGATNCTATACAT
AGAGAATCCTAAAGATGCTACCAGAAAACTACTAGAGCTAATCAATGAAT
TTGGTAAAGTAGCAGGATACAAAATTAATGCACAGAAATCTCTGGCATTC
CTATACACTAATGATGAAAAATCTGAAAGNGAAATTAAGGAAACACTCCC
ATTTACCATTGCAACAAAAAGAATAAAATACCTAGGAATAAACCTACCTA
AGGAGACAAAAGACCTGTATGCAGAAAACTATAAGACACTGATGAAAGAA
ATTAAAGATGATACAAATAGATGGAGAGATATACCATGTTCTTGGATTGG
AAGAATCAACATTGTGAAAATGACTATACTACCCAAAGCAATCTACAGAT
TCAATGCAATCCCTATCAAACTACCAATGGCATTTTTCACAGAACTAGAA
CAAAAAATTTCACAATTTGTATGGAAACACAAAAGACCCCGAATAGCCAA
AGCAATCTTGAGGAAAGAAAAACGGAGCTGGAGGAATCAGGCTCCCTGAC
TTCAGACTATACTACAAAGCTACAGTAATCAAGACAGTATGGTACTGGCA
CAAAAACAGAAATATAGATCAATGGAACAGGATAGAAAGCCCAGAGATAA
ACCCACGCACATATGGTCACCTTATCTTTGATAAAGGAGGCAAGAATATA
CAATGGAGAAAAGACAGCCTCTTCAATAAGTGGTGCTGGGAAAACTGGAC
AGCTACATGTAAAAGAATGAAATTAGAACACTCCCTAACACCATACACAA
AAATAAACTCNAAATGGATTAAAGACCTAAATGTAAGGCCAGACACTATA
AAACTCTTAGAGGAAAACATAGGCAGAACACTCTATGACATAAATCACAG
CAAGATCCTTTTTGACCCACCTCCTAGAGAAATGGAAACAAAAATAAACA
AATGGGACCTAATGAAACTTAAAAGCTTTTGCACAGCAAAGGAAACCATA
AACAAGACGAAAAGACAACCCTCAGAATGGGAGAAAATATTTGCAAATGA
AGCAACTGACAAAGGATTAATCTCCAAAATNTACAAGCAGCTCATGCAGC
TCAATAACAAAAAAACAAACAACCCAATCCAAAAATGGGCAGAAGACCTA
AATAGACATTTCTCCAAAGAAGATATACAGATNGCCAACAAACACATGAA
AGGATGCTCAACATCACTAATCATTAGAGAAATGCAAATCAAAACTACAA
TGAGGTATCACCTCACACCAGTCAGAATGGCCATCATCAAAAAATCTACA
AACAATAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACCCTCTTGCACTG
TTGGTGGGAATGTAAATTGGTACAGCCACTATGGAGAACAGTATGGAGGT
TCCTTAAAAAACTAAAAATAGAACTACCATATGACCCAGCAATCCCACTN
CTGGGCATATACCCTGAGAAAACCATAATTCAAAGAGTCATGTACCACAA
TGTTCATTGCAGCNCTATTTACAATAGCCAGGANATGGAAGCAACCTAAG
TGTCCATCGACGGATGAATGGATAAAGAAGATGTGGCACATATATACAAT
GGAATATTACTCAGCCATAAAAAGAAACGAAATTGAGCTATTTGTAGCGA
GGTGGATGGACCTAGAGNCTGTCATACAGAGTGAAGTAAGTCAGAAAGAG
AAAGACAAATACCGTATGCTAACGCATATATATGGAATCTAAAAAAAAAA
AGGTNCTGATGAACCTAGNGGCAAGACAGGAATAAAGACGCAGACGTAGA
GAACGGACTTGAGGACACGGGGAGGGGGAAGGGTAAGCTGGGACGAAGTG
AGAGAGTGGCATNGACATATATACACTACCAAATGTAAAATAGATAGCTA
GTGGGAAGCAGCCGCATAGCACAGGGAGATCAGCTCGGTGCTTTGTGACC
ACCTAGAGGGGTGGGATAGGGAGGGTGGGAGGGAGACGCAAGAGGGAGGA
GATATGGGGATATATGTATACGTATAGCTGATTCACTTTGCTGTACAGCA
GAAACTAACACAACATTGTAAAGCAACTATACTCCAATAAAGATGTTAAA
GGGCTTCCCTGGTGGCGCAGTGGTTGAGAGTCCGCCTGCCGATGCAGGGG
ACACGGGTTCGTGCCCCGGTCCGGGAAGATCCCACATGCCGCGGAGCGGC
TGGGCCCGTGAGCCATGGCCGCTGAGCCTGCGCGTCCGGAGCCTGTGCTC
CGCAACGGGAGAGGCCACAACAGTGAGAGGCCCGCGTACCGCAAAAAAAA
AAAAAAAAAAAAAAAACCACAATGAGATACCACTTCACACCCACCAGGAT
GGCTAAAAGAAAGCAGACAGCAACAAATGCTGGCGAGGATGCGGAAGAAC
GGGAACCCTCACGCACTGCTGGTGGGAGCGTAAACTGGTACACCACTCTG
GAAAACAGTCTGGCAGTTCCTTAAAAACTAAAGATAGAACTACCATATGA
CCCAGCAATTCCACTCCTTGGGCATATACCCCGAGAGAAACGATATGTTC
AACAAAAGACTAATGCACAAATGTTCATAGCAACNTTATTCANAATAGCC
AAAATGGAAGCGACCCAAATGTCCATCAACGGATGAACGGNTAAATAAAN
TGTGGTACATTCGTACGATGGAATATTACTCAGCAATAAAAAGGAACGAA
ATACGGATACCTGCAATAACACGGATGAACCTCGAGACATTATGCTACGT
GAAAAGAAGCCAGTCACAAAAGGTGTATGTGATTCCACTTANATGAAAGC
CCGGAGTAGNCAGATCTACAGANACGGAAAGGGTAGTNTGGTTGCCAGAG
ACTGGAGNAGGGGGGAGGTGGGAATGGCGGCTAATGGGTACAGGGTTTCT
TTGCGAGATGACGAACACNTTCTACAATTGACTGCGGTGATGGTTGCACA
ACTCTGTGAATAATACTNAAAACTACTAGTTGTACGCTTCGAAATGGGTG
AATTATATGGTATATGAATTATTTCTCAAAAAAAGTTGGTTTTAAAAACA
AGCCTAGAGTCAA
>rnd-6_family-587#DNA/hAT-Charlie ( Recon Family Size = 185, Final Multiple Alignment Size = 170 )
AAGTTCTTAACCTGGGGTCCATGGATGGGCTTCAGGTCCGTGAACCCCCT
GAAATTGATTAAAAAAATGCCGACGTGTATGTGCATTTTTCTGGGGAGAG
GTCCATAGCTTTCATCAGATTCTCAAAGGGGTCCGTGACTCCCAAAAGGT
TAAGAACCACCATTAAG
>rnd-6_family-68#DNA/hAT-Tip100 ( Recon Family Size = 134, Final Multiple Alignment Size = 125 )
TCAATTTGGAAAGACGTTTTNGAACGTTTCAACAAAACAAGTGAGAAACT
ANANTCCTGATTTGGACATAAAGGATANCTTTTTTGATCATCTTAAATTT
ATTTANTAAAGAACTAAGAGAAAATTCAGATAAAATTAGAATACAAAACA
AAAGCGANAAGATGAGCGATGAAATCAATAGANATTATTCTGACATCGAG
GAAATCGTAACAAGACNTTTCAGATCATACCAAAAGCTAGTAATTCATTA
AGAGGAAGAGATAAATTTCGAATAGAAGTAATGATTGTTTGATAATCCAA
TTAATGAAGAGGAGGTGAATCATATGAACACATTGGAAAANATTTAAATT
TCTTGCTGATTTGACACGAAATACTGACATGACGAAGATAACATAAAACT
CATACCTCTACTAGGACATCGGCGACAAACTGGTTAATGAGTGTCGTCAA
TTCAAAGAGTATTTAAGATTAGTCACTGCACAAGAAAACTTGAAATGCCC
TGAAATCTTACAGCTCATATATGAAAGAAACTTGATAGAGGTTTTCCCAA
ATTTGACAACAATCCTAAAATTTACATTTATATGTTACCAATAAGCTGGA
AAAAGAAACTTTTCTAAACTATCAATAATAAAAAACAAATTTCGATCAAC
CATGCTAGAGGAAAGACTGAATTATCTTTCTATTCTCTCTATAGAAAATG
ATATTACAAAATCATTGTCATATGAAGAGGCGATCAAAGAGTATGCAGCC
AAAAAAATGTGGAGAAANAATTATAGAGGTGTGTCAGGCAGTTAATTAAT
AAAAATATTAGTTATTCTGGATTTTGTGATGTTTGTGGTATTTGTCAGCT
TTTAAAATTTGTAATTTGTTGTGATTCTTTTCTCATTCTAAATAAATATT
CAC
>rnd-6_family-451#LTR/ERVL ( Recon Family Size = 134, Final Multiple Alignment Size = 124 )
ACTTGGTACCAGGAGTGGTCCNAGGAAGCAGACNCTAAGATGGGATTTTG
GAGCTGGATCACTCGCCGGCCGGCTGGCAATGAGGACCCCATCACTGGTG
GTAGGTGGAGCACTGATAGCCCTGGCACGCGGTNGCAGTGCAATTGTTAA
AACTTTCACCGGTGGTGAACTGGGATGGGATACCGGTGGAAGGGAATGCA
CTGCTGGGTGCAATATNTCAGGCGTTTGAGAGGTCATATAGTAATTATAA
GGACTATGGAATTGGNTGGCTGTTGCTAAGCTCNATTGATGCNCTGGAGA
AAGANAATGANAGGCTGAGGGCGATTAATCACCAATTNAAGGCNAAGTGT
GAAAGCCAGAGGGCCCTTGGCAGCGTNTAAAGAGACTCTCATCTCCTGCA
GCCGGAGGGCAGAAAAANCAGATGACCCAGGACTTAATTCTCAATTTAAG
AGTAGCAGAGCTCCAGAGAAGGCTGAATTCTCAACTCT
>rnd-6_family-854#DNA/hAT-Charlie ( Recon Family Size = 150, Final Multiple Alignment Size = 123 )
TTCAAAGTGTGGTCCNCGGACCACCTGCATCAGAATCACCTGGGATGCTT
GTTAAAAATGCAGATTCCTGGGCCCCCGCTCCTATCAGAATCNGAATCGT
TCCTGGTAGGGCCCGGGAATCTGCATTTTNAACAAGCCCCCTTGATTCCT
GTGCACCCCGAAGTCTGATAACTGATGG
>rnd-6_family-97#DNA/hAT-Charlie ( Recon Family Size = 126, Final Multiple Alignment Size = 115 )
AGCGGCCATATCTCAAAGAGGAAAGGGCAGTGCCACCCGGGGGCANTTTG
GAAATTTGTGGGGGCGTTTTTGGTTGTCACAATGGCTGGGGGCGCTACTG
GCATTTAGTGGATGGGAGCAGGACAGTCCCGCACAACGAAGAATTGTCCC
GCGTCCCGCACGACTTTCGAATGTCCCGCCGGACATTCATGTAGGTGAAA
AACCTGTTTATAATTATCTGAGCCTAGAACCTAACTCCATTTTACATATA
AACACAAAGTATTTTTTGCACGGTTTTAATATACACTGAATTTTCCAGGA
ATGCAACTACCGTGTAATCGAGGGAAGATTGTACTTTGTTTTGTTCGGAA
CTTTACCAAGAGTTGTTCACCATTTCGGAAAATCACGTCACCGACGGCAA
CTGTGCTCGTGGTATTTGAGTCGCCAATACAACACACCTGTATCAGTCTG
CATTTGTAGCTGTCGCATTCACGGTGATTCTACGTACAGGCGCAAGCGCC
CGAGCATTTCACATATTGAAATACATATTATTTTATTATAAATTACTTTT
ATTTCTCCTTTATATTACAGTTAGGGCATTATATTGATTTTTTTTAAAAT
TATGTGTGTAGGTAGGTTATATTATCTATGAATTTCATTTCAGGATAGTA
AAGGGGGCGTTACAAAGATNTATTGTTNTATAAAAGAAACGCCAT
>rnd-6_family-270#LINE/L1 ( Recon Family Size = 135, Final Multiple Alignment Size = 112 )
TGCCAGAAGAAAATGGAGTAACATATTTAAGATACTCAAGGAAAGAAAAT
GTGAGCCAAGGATTTTATATCCAGCNAAACTGACTTTCAAGTATAAAGGG
CACACAGAGTTATCAACATGCAAGAACTCAGGGAATATTGTTCCCATGAG
CCCTTCCTGAGGAATCTACTAGAGAATGAGCTTCAGACAACCAAAATGAC
TAGAGAGACATCGACATAAGGACTGGTGGTGAGCATTAAATATATAGTTA
CNTGTAGAACTAAGACTAAATGAGGATTAAAAGGGAGAGAGTATAGTACG
TAATGGCTATATGCTTAGTCTAACAATATATTTTAAATGAAAGAAATGGG
GAGAACATATGCAAAATTTTAAACTGTTTTCAGTAATCATATTATTGGTG
GTAGTATTAGTATTGTTATTCTGAGACTGTTGTGTGTGTAATGTGGGATA
AAGCAAATGAGTAATTATGGGATATTCTAATTCTATCATCCCCTGTGTCC
TTGAGAACCAGGATTCTCGGTGTGGAAGAAAGGAGATACAGATGTAATAC
GANAGAGGTTAAAGTAAAAACTCCGTAGTCCTGAATTTGAATTGGAAGTA
TCAGTATGAACTCATGAGGTATTTTATCTTATAAATATTATATNTATCTA
TACTATNTCCTAGCTCTGTCCACTGAAAGGCCTAGAAACAATGACCAGCC

>rnd-6_family-71#LTR/ERVL ( Recon Family Size = 141, Final Multiple Alignment Size = 112 )
GCCTCTCTCTGCATCCCTCACTCATCCTTCCCNGGGAAGGAGGAGTGACT
TTACCTGACTGGTGAGTTTGGAAGAATGGCGTGGGCATGCTCAGCTCAGC
TCCTTCCTTTGTCTTCTTTGGGAGTNAGCCTGCCCGCGAGGAGCACGCGT
TCTGTGCTCCTCCATGTGCTACAAGTTTTACAGGGGCAGGCCCCGTAAGG
GGAGGCCTGCGGTTTTTCCAGCNCTGCCTGTGACTGGGTGGTAAGTCTAT
TCTGGGNTCAGTATTAGNAAGCCCACTTGGCTNCANATNTAAGCCACATC
CTCCAATTCAGCTTTATCAGTAATAAAGNTGATATTTTGATCTCCATCTG
TTNGTTTTCTGTGTCCTATTTCTCAATTGGTTCAGAACTCGGGCGGGGAA
GAGGGGTGTTATTTATTGGGTCCCCTAACGCCCCCACAC
>rnd-6_family-1265#DNA/hAT-Charlie ( Recon Family Size = 139, Final Multiple Alignment Size = 109 )
GGGTGCCAGCGAGAGCTCTTGCTCTACACCGCTGGTTTTCAAACTGTGCT
CCNCGGAGCCCTGGGGAGCCACCGGAGTGATCTGGGGGCAAACGGAGAGC
CCAGCCAGTGGGANTCCATGGGCCTCACCCCCGCTTCAACCAGAGCAGCT
CCGCTTTTATCTGTTTTATATATTGGGCTTCCGCGTAAGATTTCGTTTGA
AAGAAAGGNTTCACTGCTAAGAAAGAAAAAATCAC
>rnd-6_family-605#LTR/DIRS ( Recon Family Size = 155, Final Multiple Alignment Size = 102 )
GCAGTCGGNTGCCAGGNGTNTACTTCCAGCCGGAGAAAGAGGGAAAAGGA
CAGCTTTCCCAGGGACAATTCCGGACCCTTGGGACCATCCAGAATCACCA
AAGCCTAAACTTTGCACGGCCTGGGGAACGCTCTTCCGCACGTCCAGCAA
TCCCCACGTCAAAACCTTTCTCGGCAGAGGCAGGCACTCTCTCCCTTGTA
CTAGATAGCTCGGCAGAGCCTTCCGAGAAACATGCTGCGTCATTCAGCTT
GAACGTGGGACGCGGAGGGGAGAGTACGCTTTCTCCCCGTTTGGAGGCGC
CTTGCGCTCGGCTTCAAAGCTGCCTGAACAGCACTAGCGGCCCGACGTCT
CTGCACGGCAGGATTGTCGTTGCGGGCCGAGGCTGCGTGTTCTCCCAAAG
CGAAAACCGTGCTGGCAATCCCTTTCTAGGAACTCCTCCCACGGCACCCC
ANGTTCAGCTCCGGCCGAACGAAAGGTGACCTCAGGCCTCAAGGTAAGTT
CCAGTGTTTCACGTCGGGGGAGTTGGGTGTGCAGGGGTTTCCATGAGGCC
ATACTCCACCACGGAGTGCCTTAACTCTGCGACGCTCCTGGGGGCACACA
GGATAGGAGCTCGTTCGCCAATTTCGCAGGATGACTTCTCTCCGTGCCGG
AACGGCGGCTCCTGGCTTCTGAGGAACCTTAGCCTAAACAGGCCCCTGGA
GAAAGCTCTTCACATTCAGAGCAAGGGCAACGTACTGCTCTCTGGCTTGC
CTGGGTTGAGTGCCCCAGTCGTCAAAGAGCCTCGCGAAGGCAGTGCTGCG
CG
>rnd-6_family-422#SINE/MIR ( Recon Family Size = 114, Final Multiple Alignment Size = 98 )
AACAAAATTGACAGTTCTTTGGGCAGCTGGGAAGTGGCCTTGGAGTCAGA
CANACCTGGGTTCAGTCCCGGCTCTGCCACTTACNAGCCATGTGACCTTG
GGCAGGTGACTTCACCTCTCTGAGCCTCAGTTTCCTTATCTGTNAAATGG
GGATAATACTGTTACTTGTTTCACAGGGACGGATGGANTGAGGATGACTG
AGATGGGTAGGCCCAGCACNNCGCCTGGCACAGAGTAGGCNCTCATGAAT
GGCAGNTCTTGNTATAGCTGCTGCTTTTANGGCNAGAGGAGGGAGTCCCG
CCCCAAGANTCCCACGCAGCCTGGCTCGGGGCCACCCTGGGNCACTCCCT
TCCTCAAACTGTCCTCCGGCACTGGCA
>rnd-6_family-439#Unknown ( Recon Family Size = 98, Final Multiple Alignment Size = 97 )
TGGAGAATAAAACCACCTCCGAGTGATTAAAACTTAGACCNGCTAGTCAA
AATGCNTTATCACCTGTTGTTCCAAAACNCTGATCAACGGAACAAGTTNT
ACTAGGGATAACAGCGTAATCGTATTCTGGAGTTCATATCGGCAATATGG
TTTATGACCTCGATGCTGGATCAGGACATTTCAATGGTATAACTGCTATT
AANNGTCCGTTTGTTCAACGATTAAAGTCCCACGTGATCTGAGTTCAGAC
TGGAGTCATCCTGGTTGGTTTCTGTCTATTACAGATTTCTCCCAGTACGA
AAGGACAAGAGAAATANGGCCTACTTTACAAAACGCCTTCAAACTAAATG
ATGATACAATCTACAATTCAATNAATTAGCGCAAATCTACNTGCCCAAGA
ACAGGGTTTGTTGCGGTGGCAGAGCCCGGCAATTGCGTAAAACTTAAACT
TTTATACCCAGAGGTTCAAATCCTCTCCCCAACAAAATGTTTATAATTAA
CATTCTAACACTCATTCTCCCTATTCTNTTAGCCGTAGCATTCCTAACAT
TAGTAGAACGAAAAATCCTAGGCTACATACAATTCCGAAAAGGACCAAAC
ATCGTAGGCCCATATGGCCTACTACAACCCTTCGCCGATGCAATCAAACT
ATTCACTAAAGAACCCCTACGACCAGCCACATCTTCCACCACCATATNTA
TNATCGCACCCGTACTTGCCCTAACCTTAGCTCTCACAATATGAACTCCC
CTACCCATACCATACCCACTNATCAACATAAACNTAGGCATATTATTCAT
ACTAGCCATATCAAGCCTAGCCGTCTATTCCATCCTNTGATCCGGATGAG
CTTCACATTCAAAATACGCACTCATTGGAGCCCTACGGGCAGTAGCACAA
ACAATCTCATATGAAGTAACGCTAGCAGTTATTCTATTATCAGTNCTACT
GATAAACGGNTCNTTCACCTTTCNACACTAATCACTACACAAGAACAACT
ATGACTAATTTTTCCTTCATGACCNCTAGCCATAATATGATTTATCTCCA
CCNTAGCAGAAATCCAACCGAGCCCCNCTCGACTTAACAGAAGGAGAATC
AGAACCCGTATCCGGCTTCAATGTAGAANATGTAGCAGGCCCATTCGCCC
CGTCCTTCCTAGAGAATATGTCAATTTCCTTATAATAAACATTTCCACAA
CAATCTATTTTTAGGAGCATTCGACGATCCCTANGCGCCAGAATTATACA
CAGCAAACGTNATCGTTAAAACNCAAATCACTACTACTAACAATATCCTT
CCTATGAATCCGAGCATCCTACCCCCGATTCCGATATGACCAGCTAATAC
ACCTCCTCTGAAAAAATTTCCTTCCACTAACACTAGCCCTCTGTATATGA
CACNTCTCACTACCCGTCATAATACCAGGCANCCCACCNCAAACNTAAAA
TAAGAAATATGTCTGACAAAAAGAGTTACTTTGATAGAGTAAATAATAGA
GGTTTAAGTCCTCTTATTTCTAGAATAATAGGAATTGAACCTACCCCTAA
GAATTCAAAATTCTCCGTGCTACCACACTACACCATAATCTACAGTAAGG
TCAGCTAAGTAAGCTTCGGGCCCATACCCCCGAAATGTTGGTTCATATCC
TTCCCGTACTAATNAACCCTCATTCGTCTCCACCACCATNCTAACGACCC
TCGTCTTAGGCACAACAATTGTTACCACNAGCTCNCACTGATTATTCGCC
TGAATCGGACTAGAAATAAACATAATAGCCATCATCCCCATTATAATGAA
AAAACCTAACCCNCGAGCCACAGAAGCCTCCGCCAAATATTTCCTAACAC
AAGCCACCGCATCCNCGCTACTCATANTAGCAATTATTATCAACCTAATA
CACTCCGGCCAATGGACTATCACAAAATTATTCGACCCAACAGCATCCAT
TCTAATGACAATAGCCCTAGCCATNAAACTAGGACTATCCCCTTTCCACT
TCTGAGTGCCNGAAGTNACACAAGGCATCCCCCTAACCGCAGGCCTAATT
CTACTNACGTGACAAAAACTCGCACCCCTATCAATCCTTTACCAAATNTC
ACCATCAATCAACCTAAATNTANTATTAATCATANCGATACTNTNNATCA
TAGCTGGAGGCTGAGGCAGACTTAGCCANACNCANCTNCGAAAAATCACG
GCCTACTCATCAATCGCCCACATAGGATGAATAACAGCTATTNTACTGTA
TAATCCAACCATAACNATNCTAAACCTACTAATCTACATCGTAACAACCT
TCACTATNTTCATATTATTTATGCCCAGAACTCAACTACCACNACANTAT
CACTATCACACACATGAGATAAAACACCTNCCATCACAACCCTTACCATA
CTCACCCTACTNTCAATAGGAGGNCTCCCACCACTATCAGGGTTCATACC
CAAATGAATAATTATTCAAGAANTAACAAAAAACGATANCCTCATTCTAC
CAACACTCATAGCCATCACAGCACTACTCAACCTATATTTCTACATGCGN
CTCACCTACTCCACAGCACTAACCCTATTCCCCTCCACAAACAACATAAA
AATAAAACGACAATTTNACCCCACAAAACAAATAACCCTCCTACCAACAG
CAATCGTAATATCCACAATACTNCTACCCCTNACACCAATNCTNTCNGTN
TTGCTGTAGGAGTTTAGGTTAGNTCAGACCAAGAGCCTTCAAAGCCCTAA
GCAAGTATAATTTACTTAACCCCTGCCTAATAAGGATTGCAAGACTNTAT
CCTACATCAATTGAATGCAAATCAAACACTTTAATTAAGCTAAATCCTCA
CTAGATTGGAGGGATACATCTCCCACGAACTTTTAGTTAACAGCTAAATA
CCCTAGTCAACTGGCTTCAATCTACTTCTCCCGCCNCGAGAAAAAAAAGG
CGGGAGAAGTCCCGGCAGGATTGAAGCTGCTTCTTTGAATTTGCAATTCA
ANATGATGATTCACCACAGGGCTTGGCAAAAAGAGGACTCNACCTCTGTC
TTTAGATTTACAGTCTAATGCCTACTCGGCCATTTTACCTATGTTCATAA
ACCGCTGACTATTCTCAACCAACCACAAAGACATTGGCACCTTATATTTA
CTATTTGGTGCCTGAGCAGGAATAGTAGGCACCGGCCTAAGCTTATTGAT
TCGCGCTGAACTAGGTCAACCTGGCACACTNATCGGAGACGACCAANTTT
ATAATGTNCTAGTAACAGCCCACGCCCTCGTAATAATTTTCTTTATAGTC
GTACCCATCATGATTGGNGGGTTCGGAAACTGACTAGTTCCCCTAATAAT
TGGAGCACCTGACGTAGCATTCCCCCGTATAAACAACATAAGCTTCTGAC
TACTTCCCCCTTCCTTCCTACTACTGATAGCATCNTCAATAGTTGAAGCC
GGCGCAGGTACAGGCTGAACCGTATATCCNCCTCTAGCCGGAAATCTAGC
ACACGCAGGAGCCTCAGTNGACCTNACCATTTTCTCCCTACATTTAGCCG
GTGTNTCTTCAATTCTCGGNGCTATTANTTTTATTACNACNATCATTAAT
ATAAAACCACCCGCTATAACCCAATACCAAACACCNCTNTTCGTNTGATC
AGTCCTAGTCACAGCAGTATTACTNTTATTATCACTACCCGTCCTAGCAG
CCGGAATTACCATACTGTTAACTGACCGAAACCTAAACACAACCTTCTTC
GACCCTGCAGGAGGAGGAGACCCAATCCTATATCAACACCTATTTTGATT
CTTTGGTCACCCCGAAGTATATATTCTAATCCTACCCGGCTTCGGNATAA
TTTCACATATCGTNACCTACTACTCAGGAAAAAAAGAACCTTTCGGGTAT
ATGGGAATAGTATGAGCTATAGTTTCTATCGGNTTCTTAGGNTTTATCGT
ATGGGCCCATCATATATTCACAGTNGGNATAGACGTCGACACACGAGCAT
ACTTTACATCAGCCACTATAATTATTGCTATCCCTACAGGAGTAAAAGTN
TTTAGCTGACTAGCAACACTTCACGGAGGNAATATTAAATGATCCCCNGC
CCTAATATGAGCCCTAGGCTTTATCTTCCTNTTCACAGTAGGNGGCCTAA
CCGGCATTGTCCTAGCTAACTCATCNCTAGACATCGTTCTCCACGATACC
TACTATGTAGTCGCCCACTTTCACTATGTACTTTCAATAGGAGCTGTCTT
CGCCATCATAGGAGGNTTTGTCCACTGATTCCCACTATTCTCAGGATATA
CACTCAACTCAACATGAGCAAAAATCCACTTTATAATTATATTCGTAGGT
GTAAACATAACATTCTTCCCACAACACTTCCTAGGCCTATCTGGCATACC
TCGACGATACTCCGACTACCCAGACGCCTACACAACATGAAATACTATCT
CATCAATAGGCTCNTTCATCTCACTAACAGCAGTCATACTAATAATCTTC
ATTATCTGAGAAGCATTCGCATCCAAACGAGAAGTATTAACAGTAGACCT
CACCTCCACAAACCTTGAATGACTAAACGGATGTCCTCCACCATACCACA
CATTTGAAGAACCAGCATACGTCAACCTAAAATANTCAAGAAAGGAAGGA
ATCGAACCCTCTCTAATCGGTTTCAAGCCAACATCATAACCACTATGTCT
TTCTTTATGAATGAGATATTAGTAAAACCTTACGTAACTTTGTCAAAGTT
AAGTCACAAGTGAAAATCCTGTATATCTCCATGGCATATCCCTTCCAACT
AGGCTTNCAAGACGCAGCATCACCCGTTATAGAAGAACTCCTACANTTTC
ATGACCACGCATTAATAATTGTCTTCCTAATTAGCTCCCTAGTCCTCTAT
ATCATCACCCTAATACTTACAACCAAACTAACACATACCAGTACAATAGA
CGCCCAAGAAGTAGAGACTATTTGAACTATCCTCCCAGCCGTCATCTTAA
TCNTAATCGCCCTACCTTCCCTACGAATTCTCTACATAATAGACGAAATT
AACAATCCCTCTCTTACCGTAAAAACAATAGGACACCAATGATACTGAAG
TTATGAATATACCGACTACGAAGACCTAAACTTCGACTCNTATATAATCC
CAACCTCAGACCTAAAACCAGGNGAACTACGACTACTAGAAGTAGATAAT
CGAATGGTTTTACCCATACAAATAACAATCCGAATACTAGTCTCCTCCGA
AGACGTATTACACTCATGAGCCGTNCCCTCCCTAGGCCTAAAAACAGACG
CAATCCCTGGACGCCTAAACCAAACAACCCTAATATCAACACGACCAGGC
TTATTCTACGGACAATGTTCAGAAATCTGTGGCTCAAATCATAGCTTCAT
GCCAATCGTTCTCGAACTAGTACCCTTAGAGAACTTCGAAAAATGATCCG
CATCCATACTATAATCTCATTAAGAAGCTAAACTAGCGTTAACCTTTTAA
GTTAAAGATTGAGAGCTATAAACTCCCCTTAGTGACATGCCACAACTAGA
TACATCAACATGGCTCCTTACCATTCTNTCTATANTCCTNACCCTNTTCG
CACTACTTCAACTAAAAATCTCAAAGCACTCCTACTCCCCCTCCCCCAAA
CCAACACGCACCAAANTACAAAAACAACAAACCCCTTGAAANACNACATG
AACGAAAATCTATTTGCCCCTTTCATAACCCCAACAATANTAGGCNTCCC
TATCGCCACTCTAATTATTATATTCCCNANTATNTTATTCCCAACACCAA
ATCGACTAATTAACAATCGCATAATTTCCATTCAACAATGACTAACCAAA
CTTACATCAAAACAANTAATAANTACACATAACCTCAAAGGACAAACCTG
ATCTCTAATACTTATCTCACTTNTCCTATTCATCGCTTCNACAAACCTTC
TCGGAATACTACCCCACTCATTTACACCCACCACNCAACTCTCAATAAAT
TTGGGCGTAGCTATTCCNCTATGAGCCGGCACCGTCNTTATCGGNTTCCG
TAATAAAACAAAAATATCTCTAGCCCACCTTTTACCATTAGGCACACCCA
CTTTCCTAATTCCCATACTAGTAATNATCGAAACTATCAGCCTGTTTATC
CAACCAGTAGCNCTAGCCGTACGACTAACGGCCAACATTACAGCAGGTCA
CCTATTANTACATCTAATTGGAAGNACAACTCTTGCACTAACAAGCATCA
GCCTATCCGCAGCTCTCATCACATTCACTATCCTCACTCTATTAGCTATC
CTCGAATTCGCCGTNGCCCTAATTCAAGCCTACGTATTTACCCTACTAGT
AAGCCTGTACCTGCAAGACAATACATAATGACCCACCAAACCCACTCATA
CCACATAGTAAATCCCAGTCCTTGACCNCTTACAGGAGCTCTCTCAGCAC
TTCTCATAACATCAGGCCTAATCATATGATTCCACTTCAACTCAATAATT
CTACTAATNTTAGGCTTACTAACAAATATCCTAACAATATACCAATGATG
GCGAGACGTCATCCGAGAAAGCACTTTCCAAGGCCACCACACACCAACCG
TCCA
>rnd-6_family-1391#LINE/L1 ( Recon Family Size = 114, Final Multiple Alignment Size = 96 )
ACATGAGAAATGAAAAGGGGGAAATAACCGTCGAAACAGAGAAANTTNAA
GAAACATAAAAGACTACTNTGCACAACTCTATGCAAATAAATTTNAAAAC
TTAGATGAAATGGATAANTTCCTAGGAAAATATAATTTACCAAAACTGAC
CCAGGAAGAAAATATGAACATACCGATTCCCATTAAAGAAATNGAATAGT
AATCTAAGAACTCCCACCACAAAAAGNNCCAGGCTCAGATGGTTTTACAG
GCGAATTCTACCAAACNTTCAAGGAACAGNTAATCCTANTTTTCTGAAAC
TATTCCAAAAAGAATNGAAGAGGAGAGAANACTATCTCAACTCATTTTAT
GAGGCCAGCATNACCTTGATACCAAAATNAGACAAGGGCANTACGAGAAA
AGAAAATTACAGACCAGTATCACTNATGAACATAGATGCAAAAATCCTCA
ACAAAATACTAGCAAACCAAATCCAAATATACATTAAAAGAATAATACAC
CATGATCAAGTGGGATTTATCCCAGGGACGCAAGGATANTTCAACATNCG
AAAATTAGTCAAGTATACACCACATTAATATAAATAAAGACTGAAAGTCA
CGTAATCATCTCATCAGATGCCAGAAAAAGCATTTNATAGAATTCAATAC
CCNTTNANGATAAAGACNCTCNANAAANCAGGNATAGAAGGGANCATACC
TCAANNTGACAAAGGNCATNTATTGACAAANCCACAGCTGACATCATANT
CANTGGTGAAAAGCTGGAAGCATNTCCCCTAAGATCAGGAACAACGCAAG
GATGCCCNCCCTCATAACTGTTTCTATTCAACATNGTNCTGGAGGTCCTA
GCNANGGCAACCAGNCAAGAAAAAGAAATAAAAGNCATCCAAATTGGAAA
AGAAGTAAAACTGTCNCTATTTTCAGATGACATGATCTTACACATAGAAA
ATCCTAATAGGTGCTACTAGAAAANTGCTAGAACTNATAATGAATTCAGT
GAATTGCAGGATACAAAATTAATANACAGAGNTCNNTTGNGTTTGCAGGA
TACGACTANCAATGAAGATCCGAAAATGAAGTTAAGGAAACAATTNTATT
TACGATACGCGAAAAGAATGAAATATTTAAGAATAAACTATTTACGAGCG
AAAGACTTGTACTCTGAAAATTATAAAAATAAATGAAAGATAAAGAAANT
AAAGAAACGCCAAAANTGGAAGACATNCCATTGTTCTAGATCGGAANACT
TAATATTGTTAAAATGACAATACTTCCCAAATCGATCTACAGATTCAACG
CAATCCTTATAAAAATTCCAGCTGCTTTCTTTGCAGAGATTAACAAGCTG
ATTCTAAAATCGCATGGAANTACAAGNGACCCAGAATAGCCAAAATAATN
TTGAAAAAGAAACAAAGTTGGAGGACGCGCTTCCCGATTTCAGACTACTG
CAAAGCTACAGTAATCAAGACAGTGTGGTATTGGCANAAGAACAGACGCG
TAGATCGATAGAACACGACAGGGAGTCCAGAAATANACCTNCACACTTAT
GGTNAATTGAACTATGACAAAGGAGGCAAAAATATACAATGGAGAAAAGA
CAGTCTCTTCAATAAGTTGTGCTGGGAAAACTGGATAGTTACATATAAAA
GAATGAAATTAGAACACTCTCTAATACCATATACAAAAATAAACTCAAAA
TGGATTAAGGACCTAAATGTAAAACTGAATACTATAAAACTCCTAGAGAT
AAACATAGGCAGAACACTCTTTGACATAAGTCACAGCAAGAGTTTTTTGG
ATCTGTGTCCTAAAGTAAAGGAAATAAAAGCAAAAATAAACAAATGGGAC
CTAATTATACTTAAAAGCTTTTGCACAGCAAATGAAATCATGAACAAAAN
GAAAAGGCAANCCACAGACTGAGAGAAAATGCATTTGCCGTGCGATGCCA
CCAACAANGNNTTAGTNTCCAGAGTATACAAACAGCTCATACAGCTTAAT
ATTAAAAAATAAATANAGTCAAAAAATAACCGGGGCTTCCCCGGTGGCGC
AGTGGTTGAGAGTCCGCCTGCCGATGCAGGGGACGCGGGTTCGTGCCCCG
GTCCGGGAAGATCCCACATGCCGCGGAGCGGCTGGGCCCGTGAGCCATGG
CCGCTGAGCCTGCGCGTCCGGAGCCTGTGCTCCGCGACGGGAGAGGCCAC
AACAGTGAGAGGCCCGCGTACCGCAAAAAANAAAAAAAAAAAAANAAAAC
CAAAAAATAGTCAGAAGACCTAAACAGACATTTCTCCAAGGAAGATATAG
AGATGGTCAACAGGCACATGAAAAGATGCTCAATACTGTTAATTTCTAGA
GGAAAGGAAATCTGCACTACAATGAAGTCTCACCGCACNCCGNTCAGAGN
GGCCATCNGNAAAAAGTNTACAAATACANAAANGCNNGANAGGNCGTGGA
GAANNGGGAGCCCTNCTACGCTGATGGGCGGGATGTAAATTGCCGACAGN
CACTTGGAGAAGTGTATGGTGTTTCCTGAAACTTCTAAAAACAAAGCAAC
CATATGATCCTGCAATCCACTTATGGTCCTATAGCTTAGGGAAATTAAAA
TCAAAAAGACACAGCCACCCCAAAGTTTGGGACGGCTCTGTTTACAATAG
CCGAGACATGGAAGCAACCCAAATGTCCATAAACGTAAAATGGATAAAGA
AGTTGTGGTACTTACGTACAATGCAATATCACTCAGCAATGAAATCTATG
TCATCAGGCCCGTAGCAGCATAATGAGTGGATTTAGGTACGATGATTCTA
AGTGAAATAAGTCACACAGACAAATATCATATGATATNACTTATNTGTGG
AATCTAAAAAATGGTACAAATGAACTTATTTACAAAACAGAAATAGACTC
ACAGACGTAGAAAACAAACTTATGGTTACCAAAGGGGAAGCGGAGCGGGG
GAGGGAATAAATTGGGAGNTTGGGATTAACATATACACACTACTATATAT
AAAATAGATAACCAACAAGGACCTACTGTATAGCACAGGGAACTNTACTC
AATACTCTGTAATGACCTATANTGGAAAAGAATCTGAAAAAGGATGGATA
TACGTATATGTATAACTGATTCACTTTGCTGTACACCTGAAACTAACACA
ACATTGTAAATCAACTATACTTCAATTAAAAAAATTTTAAAAAAAGANAC
GNTCTNTTCAATAAGTGTTATTGGGAAAACTGGACAGACAATATTAAAAA
ATGAAATTAGAACACTCCCTAACACTATACACAAAAATAAACTCAAAACG
GATTAAAGACCTAAATGTAAGGCCGNATACTATAAAACCCCTAGAGGAAA
ACATAGGNAGAACACTCTCTGACATAAATCGCANCAGNATCTTTTTNGAT
CCGCCTCCTAGAGTAAAGGAAATGAAAACAAAAATAAACAAATGGGANCT
AATTAAACTTAGAAGCCTTTGCACAGCAAAGGAAACCACNGACNAGACGA
AAAGACAACGTACNGAATGGGAGAAAATANTTGCAAATGANACGACTGAC
AAGGGATTGATNTCCAANGTATANAAACAGCTCACGCAGCTCAACATCAA
AAAAACCAAACAACCCAATCNAAAAATGGGCAGAAGANCTGAGTAGACAC
TTCTCCAAAGCGGANATGCAGATGGCCAANAGGCACNTGAAAAGATGCTC
NACATCACTNATCATCAGNGAAATGCAAATCAAAACCACAGTGANNTATC
ACCTCACACCNGTCAGAATGGCCATCNTCAAAAAANNCACAAACACAAAT
AACGAATGCTGGCGAGGGNGTGGAGAGAAGGGAACCCTCGTGCACTGTTG
GTGGGAACGTAAATTGGTACAGCCACTATGGAGAACGNTACGGAGGTTCC
TCAAAAAATCTAAAAATAAGGGCTNCCATATGATCCAGCAATTCAACTCC
TGGGTATATATCTGGAAAAAATGAACACACTAATTCAAAAGGCTCGATGC
ACCCCAATGTTCACAGTAGCAGTATTTACAATAGCCAAGACACAGAAGCA
ATCCAAGGGCCCATCAACAGACAGATGGATAAAGAAGATATGGTACAATG
GANTACTACTCAGNCATAAAAAAGAACGANATTCTGCCATTTGCAGCAAC
GTGGATGGACCTAGAGANNATTACGCTAAGTGAAATAAGTCCAGAGAAAG
ACAAATACTGTATGATATCACTNATATGTGGAATCTAAAAAATATACAAA
TGAATTATATAACAAAACAGAAACAGACTCACAGACATAGAGAACAAACT
NGTGGTTACCAGCGGGGAGAGGGAGTGGGGAGGGGCAAACTGGGGGTATG
GGATTAAGAGGTACAAACTACTANNTATAAAATAGATAAGCNACAAGGAT
ATATTGTACGGCACAGGGAACTATAGCCAATATTTTGTAATAACTATAAA
TGGAGTATAACCTTTAAAAATTGTGAATCACTATGCTGTACACCTGNAAC
TTATATAATATTGTANATCAACTATACTTCAATTTAAAAAAAGAAAAAAG
TTTCTTTAACTCAAAAATGATAGTGTAATAAAAAAAATCTAAATGAAAAT
GGGCAAAATATTNGAACNGANGGTTCCGNAAGGAAGACATACAAATGGCC
NNNAAACACANGAAAGGNNGCTTANCNTNGCTCGNNGTNANAGAAACGCA
ANTTGTAANTCACAATGGCAGTACCACTCTACACCTATCAGAATGGCTAA
ACGTAAAAAGGCTAACCACATTAAAGTTGAAGAAAATGTAGAAAAACCAG
TATCTTTTGCATTAAAAAATAAAATGACATAATAATTTTAGAGAAAGATT
GGGCATGTTCATAATATATATACCCACTTTTTGACCTAACAATTTTATTT
TTAGGAATCTATCCAAAAGAAATAAAAACATATATTTATAAAAAGACTTG
CTTAAGAATGTTCATAGCTGTTCTACACACAACTCAAAACTGGAAACAAC
CAAAATAGGCACCAACAAAGGGAAGAATAAGTAACAATTTTGTGTATTTA
TAAAATGGAATACTACTTGGCAATAACAAGAGCTACTGACACACACATCA
CATAGATGACTCCCACAGAAAAAAATGTTATAGAAAAAGCTATACACAAA
AGAATATATACTATGTAATTCCATTTATATGAAATACCAGAATAGACAAT
AATAATCTGAATTGAAAC
>rnd-6_family-315#SINE/MIR ( Recon Family Size = 136, Final Multiple Alignment Size = 96 )
CTTGGTGGTTAAGCATGGTGTTTGGGAGTCAGACAGACCTGGGTTCAAAT
CCTAGCTCCATTACTAGCTGTGTGACCTTGGGCAAATTACTTNACCTCTC
TGAGCCTCAGTTTCCTCCTCTGTAAATAACGACAGTAGAGCGCTGGGCGG
GTTAAATGAGATAATCGCACAAAGCACTTAGCNCAGTGCCTGGCACATAG
CGAGTGCTCAGTAAGCGANAGCAGCTGTTACGATTGGTAGCTGTGTTTAC
TTCCTGTAAA
>rnd-6_family-314#SINE/MIR ( Recon Family Size = 119, Final Multiple Alignment Size = 91 )
GCAGAGGAGGAGAAGGCTTTTGGAGTCAGACCTGNGTTCGAAATCCCGGC
TCTGCCACTTNCTAGCTGNGTGACCTTGGGCAAGTCACTTNACCTCTCTG
AGCCTCAGTTTCCTCATCTGTAAAATGGAGATGACGATAATACCGTCAGG
ATAGTTGTGAGGATTAAATGAGATGATGTTTG
>rnd-6_family-35#DNA/hAT-Tip100 ( Recon Family Size = 99, Final Multiple Alignment Size = 85 )
GGGGTGATATCAAAATATTTAACAACCGGTACGGCACGGGCACCGACCAA
TCAGAACGGACGCCGGCCGCAGTGCTGGAGCAGGGTCCTGGAGGCCCCCT
GCTGNGCCAGGCGTTAACCCTTTAGTTGCTGGATCGTGGGGAGGTCCAGG
ATGGTCCAGGGAGGGCCAGTGGCCATGGAGGTGGAGGATAGGCACTCGGG
AGGCTCGGGGCAGCGGCTATTTACCAACTGG
>rnd-6_family-179#LINE/L1 ( Recon Family Size = 105, Final Multiple Alignment Size = 80 )
GATTGAATAAATAAATAAGTGGGAGAGAATGCACAAATCTTCCGTAAAGA
AGAAATCCAAATACTGTAAGTAGATACACCNCCCTCTNNGAGGTGAAGCT
TAACTCCCCTCCTCCTCGAGTGNGGGTCGGATTTAGTGACTCGCTTCCAA
ANAACAGAGTATGGNAAGGGAAAAATAGTAACTTCACAGTGGAGAAACCC
GACAGANCNCATCTTCAGCCAGAGTGANCNAGGTGCAACATCANCAGTGA
TGAGTCGCGTTGATGGTTCGTGGGCCTTGATATGATGCAATGAGAAGGGT
ACTTCACCTCTGTGGTNTTCTTCCCAAAAATCCGTAACCCCAGTCTAATC
ACGAGAAAACATCAGACAAACCGAGGAACGTTCTACAAAATACGTATTCC
TCAAAACGGTCGAGGCCATGNGAAACAAGGAAAGACTGAGTAAGTGTCAC
GGCCGGGAGATTGAGGAGGCGTGACTAAATGCAACGTGGTATCCTGGATT
GGATCCTGGAACAGAAAAAGGACATTAGTGGAAAAACTGGTGAAATCCGA
ATAAAGTCTGTAGTTTAGTTAATAGTATTGTACCAATGTTAATTTCTTAG
TTTTGATAANTGTACCATGGTTATGTAAGATGTTAACATTAGGGGAAGCT
GGGTGAAGGGTATACGGGAACTCTGTACTATCTTTGCAACTTTTCTGTAA
ATCTAAAATTATT
>rnd-6_family-808#DNA/hAT-Charlie ( Recon Family Size = 96, Final Multiple Alignment Size = 79 )
ATGTTTCCAAACTTGCCTGATCATAAGAATCACCTGGGACGCTTGTTAAA
AATACAGATTCCCGGGCCCCACTCCAGNCTCGCTGAATCAGAATCTCCAG
GAGGAAGGCCTGGGAATCTGTATTTTTAACAAGCACCCCAGTGATTCTTA
TATGAAT
>rnd-6_family-218#LTR/ERV1 ( Recon Family Size = 89, Final Multiple Alignment Size = 78 )
AATCAAAATGGAGTAACTGCGGTTCAGGCATCCAAAATGGAGCCGGGNGG
CCATTGNGGATGTGGTTTCAGACACGTCCCTGCATCACTGAGAACTTGAA
TTTTCTGAACTGTATCAGACTCAAGGACACCACCAGCCGTTTTCAAAACA
ATATCTGCCAGCAGCTGCAACCTTGTGGTCTCAAGGTCTCCCCCCTTGTA
ACTATGCAACCATTTCGGACCCCAACCAATCCTTGCTTAACAAGCACCCT
TACTTCTTGCCAGCTCCAATCATAATTCTTGACAAACAACTTATGTAACC
TTGCGGCTTTTTGCCTTTATAAGCCTCCCCCATTTTGTAGTCCCCGGAAC
ACNNTTCGAGTGTTACCCGAATCTGTGTCTCCCGAACTGCAGTCCTAACA
GACCCCAAATAAACGCTTCTTTATTTCAATCAGGTCTCCGTTTCTGAAAT
TTTGGTT
>rnd-6_family-877#Unknown ( Recon Family Size = 77, Final Multiple Alignment Size = 75 )
GAGACCCCCTCCAACGCGCTGGGCCTAAACCCCACCCACACACCCTCACC
CAGGGCCCTACCTCCAAACTCCGGAACTCCACACTCCAGAGGCCCTCCTT
TCGACGTGCTGCCTCTCCCCTTCCGCGCAGGTCCTAAGCAGAGGCCCCGC
CCCACGCTCGAACGTCGCCCCGCCTAGGCCCCGCCCCANGGCCTCTCCCG
NCTACGCGGGTCCTAAGCCTAGGCCCCGCCCCACGCTCAAACGTCACCCC
CCCACCCGCCTAGGTCCCGCCCCACCCTAAACCCGCCCCTGCCTAAGTTC
CACCCCCGCCTAAACTCCGCCCCCATAGCCAAGGCTTTTTTTTTTCTTTT
TTCCTCTTTTAGATTGGGGTTCTGTTTTACCTTGTTGATTCATTGTTGTT
GATTCTTTTATATTTTTATTTTTCCTAATAAATCTTTTATTTTTCTAATT
TTATTTTATTCTTTATACTTTGTTATTGTTCTCTCCTTTTGGCTTGTTCC
CCCCTTTTTTTTCTTTTTTCTGTTGTGGTTTTATTTTACCTTGTTGCAGT
TGTTTCAATTATAGTTT
>rnd-6_family-233#LINE/L1 ( Recon Family Size = 86, Final Multiple Alignment Size = 70 )
AGGAGCTCCGAAATCTGCATAGGGGTCCCCTTGAGTCCTTGGCCGAATAC
TAAGCTGCACATGCGCAGGGCGAGACTCCACGAGGCCTGGCAGAGAACGG
CTACTGGGGAGCTGAGAGCTGAACGGAGATTCCGGAGGTCACACAGTGCT
GGGAGACGTTGGAGTTCCGACCAGCCAGAGTGGAGAGACCTCGCTGAGCA
CCCCGGGCATTCAGCTGAGACCCCAGAAAGGCCACACTTAGGAGTAAGNC
CTCTAGCCCTAGAGTAGGCCTACNCTAGACCCACCCTAACAAAGCNTAAA
ACCAAGCCTNAGCAGGATCAAAGNGATCCGCCAGTTAACTGCCTGCCAGA
ACAAAACTCAACACTCTTTAAGGAAGACAACAAAATCCAGACTCTCNACA
ATGTGGCATCCANAATGTCCAG
>rnd-6_family-685#LTR/ERV1 ( Recon Family Size = 72, Final Multiple Alignment Size = 69 )
ATTCTTCATTCCAGAGAAGACCACCTGAGGCCAGATTAAAGGAACCAGAG
AAGCTCATCAA
>rnd-6_family-80#LTR/ERVL ( Recon Family Size = 82, Final Multiple Alignment Size = 69 )
TGTCTGTAATTTACTTTAAAATACTTCAGCATAGAGGTGTGATGTGAATA
CTGGTTTGTGTGTGTGTTAGTTTAAGCTACACTCTAGGGGCNGTCAGTTG
CCCTAATCAGGAATNCACACTCCAGGGGTGGTCAGCTAGCATTTAATCAG
AAAGGCCACACTCCAGAGGCAGCTACTACAGCATTTGTCTATATCTCGAT
CAACACCAGAGGCTTTGCTAATTAGCATAATGAATGTCAGAAATGGGTTT
TCATTGGTGAAATTAGTGGCTTGTTAATTAGCATAACGAATGTTAGAAAT
GGGCTCTCATTGGTGAAATTAGTGGTATTCAAGATATGTGGATTGGCTAA
AATATTTTAGAGACACTCCCACCCTTGCAAGTCTTGCAGCCTGATCCCTT
AGGGACGGCGCCCGAGGCTTGATCCCTATTAAGTGGTCCTGTGTCGATCC
AGAGTGGAATGGTTCTGGTTGCCTGATGCCGACTATAAGGNTAACNGAAT
CCTGCCTCTGGAACGTTGTCGCGTCTGCCTCGAGTGAACCTTTCATGCAA
GGTGGAGTCGGAGCATCTAAAAACCAGAANAGGTTGCATGATCTGTTTTG
TGCCTGCTTGCTAATAAAGTTTGTTTAATAATGTCTGTACGTGTGGCAGA
ATTTGGTCTGAGACTTGCTTTCATTATAACCTGGTAGCGAGGTTGTGGAG
GTGAGCCACTTCTCGGTTTGTCCAAGACAAAGAACCTAANAGTTGTGCGT
GACCAAATTGGCTTAGGTCATTTTGCAA
>rnd-6_family-194#DNA/hAT-Charlie ( Recon Family Size = 73, Final Multiple Alignment Size = 69 )
GCATCTGGTGGCAGGCTTTATAGTGGCAAGTGAGTTGATGTACTTCAATT
GTACAGCTGCATCTGGTGGCAGGCTTTAAGTCAGAATCCGACACTTATTT
TAGTCCGCGCGTGGCCCGCCCATTATTTTATTTACCACTTCCGTCCGCGC
CTCTTTCCCGCACTGCGCACTTGTCTCAGTCACAGTTTTGGTAAGCCCAC
AAGCTAACCCTAGCCAAAATGAGTAAAAAACAAACGTCGCTGGAGAGCTT
CTTTGAAAAGGGGGAAAGACCCAATGATGAGACAGCAGAAGACTCTAAGA
CTGCCAACAAAAAGAAAGCTGCATTTAAAAGAAAATACCAAGAGTCCTAC
TTAAATTACGGGTTCATTGCAACAGGTGATTCACATTCTCCAAGCCCGCT
TTGTATAATATGTGGCGACCGGCTATCCAACGAAGCCATGAAACCTTCAA
AACTGCTTCGCCACATGGAGACCAAGCACCCTGCATTAAAAGACAAGCCT
TTGGAGTTTTTCAAAAGAAAAAAACGTGAACACGAAGAACAGAAGCAATT
ATTGAAGGCCACCACTTCATCAAATGTGTCTGCACTGAGAGCATCATTCT
TAGTGGCTAACCGCATTGCTAAAGCTAAGAAGCCCTTTACTATTGGTGAA
GAGTTGATCCTGCCTGCTGCTAAGGACATTTGTCGTGAACTTTTAGGAGA
GGCTGCAGTTCAAAAGGTGGCACGTGTTCCTCTTTCGGCTAGCACCATAA
CTAGACGAATTGATGAAATAGCAGAGGATACTGAGGCACAATTGTTAGAG
AGGATTAATGAGTCACCGTGGTACGCAATCCAGGTTGACGAGTCTACCGA
TGTTGACAACAAGGCAACAATGCTTGTTTTTGTGCGATATATTTTTCAGG
AGGATGTGCATGAGGATATGTTATGTGCACTTTTGTTGCCAACCAACACC
ACAGCTGCAGAACTATTCAAGTCTTTGAATGATTACATATCAGGAAAACT
GAATTGGTCATTTTGTGTCGGTATATGCACGGACGGAGCGGCTGCCATGA
CTGGACGGCTTTCTGGTTTCACTACTCGGGTCAAAGAGGTCGCTTCTGAA
TGTGAGTCTACGCACTGTGTCATCCATAGAGAAATGCTGGCTAGCCGAAA
AATGTCACCTGAACTTAACAACGTTTTGCAGGATGTGATTAAAATTATCA
ACCACATTAAAGTACATGCCCTTAACTCACGTCTGTTCGCGCAGCTCTGT
GAGGAGATGGACGCAGAGCACACACGTCTTCTCTTATACACAGAAGTGAG
ATGGCTTTCTAAAGGTAGATCACTGGCCAGAGTTTTTGAGTTACGAGAGC
CGCTCCAGAGATTTCTTTTAGAAAAACAGTCACCACTGGCAGCACATTTC
AGTGACACAGAATGGGTCGCAAAACTTGCTTACTTGTGTGACATATTCAA
CCTGCTCAACGAACTCAATCTGTCACTTCAGGGGAGAACGACAACTGTGT
TCAAGTCGGCAGATAAAGTGGCTGCATTCAAAGCCAAACTGGAATTATGG
GGGCGACGAGTGAACATTGGGATTTTTGACATGTTTCAAACATTAGCAGA
GATTTTGAAAGAGACTGAGCCAGGGCCTTCTTTCTCCCAGCTGGTGCATG
ATCACCTATCTCAGCTTTCAAAAGAGTTTGAGCATTACTTCCCAACCACA
AAAGACCCCCGAACTGGGAAGGAATGGATCCGCGACCCATTTGTGAATAA
GCCAGGTGAATCGACTTTGTCCGTGCTAGAAGAGGATCAACTGCTTGAGA
TCGCAAATGACGGTGGCCTTAAAAGTATGTTTGAGACAACTTCAAATCTC
CATACGTTCTGGATTAAAGTCAAGGCGGAATATCCTGAGATTGCCACAAA
AGCACTGAAAAGCCTGCTTCCATTTCCAACATCCTATCTTTGTGAAGCAG
GGTTTTCTGCAGTGACAGCAACCAAAACGAGATTACGGAGTAGACTGGAC
ATAAGCAACACACTTCGGGTGTCACTGTCTC
>rnd-6_family-1313#DNA/hAT-Charlie ( Recon Family Size = 83, Final Multiple Alignment Size = 68 )
CCATCTCATTAAGAGATGCATTTCCAATAAAATTTTACTGTTTAATAATT
ATCAAAATTTGTAATATATTTATGTTGTTTTGATCAATTGTGTACTACTA
ATAATTGTAATGATAACTCAATCCAGAAGAAATTTTTTAACACTTAGAGC
CTTATGGTCACAGGAAATTAAAAAATTCAATTTATATACGTATTTTTGTT
GCAGAGAAGTATGATAGGGTGATCAATAAAAGACTTTCAAGCATAAAAAT
ATATTACATTAGGATAAAATTCTGTGGGGGAAGTGGAATGGAAATATAAT
TTCCGACTGTTAAAGAAGAGCTCGTTCGTGTATTTTTTTAAATGGATGAT
GGTGGGTATCAAATCGCTATGGTATTTAGATTCCATTGGATACATTTAAA
AGAGTGATGTAACAGTTTTATTTTAAAATGTCAATATTTACAATATGCCG
GAAATTACATCCTTTGCAACTATTTTAAACTTATGATGAAAAATTTTAGA
TGTCAACTTAAAAATGTGCGAGGGGGTACATAGTTTTTCAAAATTNTTTT
AGGGGGTACGTGAGAAAAA
>rnd-6_family-2729#LTR/ERVL ( Recon Family Size = 72, Final Multiple Alignment Size = 66 )
TATATATCTATATCTCTATCTCTATCTCTATTGGTCTCTGTTTCTCTGGA
GAACCCTAATACAGATTTTGGTACCGAGAGTGGTTCTAGAGGAACAGAAT
TTAAGGATGAGTTTTCTGAATTGGTTCTGGGGTTTCTGGAATTGGCTCTC
TAATCTGATTAGATTTAAAGACGCTAATGACTCTATTTCCAGTAGTAAAG
AGAGCACTGATAGTCCATGGCGTGANCTGGCAATAGAGATACGCAAAATA
TCACCATTGGATACTCCTAATCAANCACTTATAAGAAGCAAGGANCTGGG
TGACCGTGTATNTGATACTTTNGAACATTTTTGTNAAACTAANGAGTATA
ATGAATTGGTTGGTTGCTCCTAATGTCGCTGGACAAAGTGGGGAAAGAAA
AGGATGAGCTCAGGGATTCGAATTCCCAGCTCAAGCNCCGCATAAATGAC
CTGAAAGCTTCTATGTCTGCCCCTGAAGGAAACCCTTATCTCCTGTAGCC
GCAGGGCTGAGATTGCTGAAAATCAAACCCAGAGTCTCATCCTGCGANTG
GCTGAATTACAACGCAAATTGAATTCCCAGCCTCGCAGGGTGTCTACTGT
TAAAGTGAGGGCATTGATTGGGAAGGAATGGGATCCTGNAAGTTGGGATG
GGGACGTGTGGGAAGACCCTGATGAAGCTGGGGACATCGAGCCCCTAAAT
TCTGATGAGTCTTCTTTGCCAGTGGAAGAGGCCTCCCCACCCCCAGTGGN
AGCGGCCTCCCCACCCCCAGTGGTAGCGGCCTCTCCACCTCCGTCTGAGG
GGATTAACCCTGCATTGCCTGAGGAAACTGTAATGGCCTCCCCTGAGGCA
GTTGCCTTGCAAGACAATNCTGATTCTCCTCAGGACCCATCCCAACACCC
TCTTTGCTTCTAGACCTATAACTAGACTCAAGTCCCAGCAGGCCCCTAAA
GGTGAGGTACAAAGTGTGACCCATGAGGAGGTGCGCTACACTCCAAAAGA
ACGACTTNAGTTTTCTAATTTATACAGACAAATACCTGGGAACACGTGTG
GGAATGGATNCTAAGGGTGTGGGGTNANGGTGGAAGGAATATAANGTTGG
ATCAGGCCGAATTTATTGACATGGGCTCACTNAGCAGAGATTCTGNATTT
AATGTTGCAGCNCGGGGAGCTAGGAGTGGCTCTAACAGTTTGTTTGGTTC
GTTGACTGAAACATAGACCAANAGGTGGCCCACANTGAATGAANTNGAAA
TGCCGGANCTCCCTTNGTTTACTGTAGAGGAAGGTATCCAAAGGCTTAGG
GAGATTGGAATGTTA
>rnd-6_family-3156#LTR/ERV1 ( Recon Family Size = 69, Final Multiple Alignment Size = 66 )
TTAAGAAAAATTATCCAAAACTTGGAAATAAGGCAAAAAGGATGACTGCG
TGTCCTTTCAATGTCATACTGGAGCATTGTCTAACAAGCCCACCCAAGGA
TTATCTAATTCTCTAGGGGAATGTACTTTGTTTGACTTACTATTTACTAT
TGATTAAGGGCCCAGACTNTGAAGTTACATGTTAACTTGTAGATTTTTGT
CNGGTAGAGATGCAAATGATTTCTGTCCAGTAGAAAAGATAACCCCAAAG
GTTACGGTTTTATTGCCCTGTAGGACATTAA
>rnd-6_family-3246#DNA/hAT-Charlie ( Recon Family Size = 77, Final Multiple Alignment Size = 63 )
CAGTGGTTCTCAAAGTGTGGTCCCCGGACCAGCAGCATCGCATCGCCTGG
GAGCTTGTTAGAAATGCAGATTCCCGGGCCCCACCCCAGACCTNCTGGAT
CAGAATCTCTGAGGGTGGGGCCCAGGGNTCTGCTTCAGGAACCCTCCAGG
TGATTTGACGATCAGCCAGGTTTGAGAAC
>rnd-6_family-531#DNA/hAT-Tip100 ( Recon Family Size = 66, Final Multiple Alignment Size = 63 )
TGTGCTGCCNTNAGACCCGGGCAAGAGGGGNCCCTGCTCTGGGTCCTGCG
CTTTAGAGGGCCCCGCATATCACAAACACACACACAACAAATAAATTTAT
TAAAGAACACGGGCGCCTCTGTCACTCGGGATCCGGCGCTCAGCGCTGGC
ACAGCGCGACCCTAACCTCTAAACATCCGCTCTCGTGACTAACACCGTTC
AGGCCCCAGGAAACGCTTCTCCACATCTTCTTGCCCTGTGTCCTCGAAAC
AAAAGGCGACTGCGTCCGAATGCTGAGATGCGTGGGTTGTGCCGCTGCCG
GCGTCGGAGACGGACACTGCTCGAGTGCAGGGAGATTTGAGCGGCGGAAG
CGCTTAGGTAAGAGAAAAGACAAATTAATTAACTTGTCAAATCCTTCCTC
TCAGATAGCATGAATGCAATAGATTCTTGCATAACGAAGTATCGTTTCCC
AGTAGTGCCGAGCGTCCGTTTTCTTGCTTCTCTTCATTGTGTTCCAATTC
GTGGTTCACAAATTAGCGCGGTATTCGCAACAGTTGCACATGGCGGCTGA
GGAACATTTTGCAATATTAAACAATTCATATTACTCTTAAATTTGTATAT
ATGTAGGTCTAGATATAACATGCGTGAAGCGTGATACCGATTCTTTACAT
TGGCAACTAGATGGACATTGAACGCTAGAATTGCGAATAGTTTTATTTTT
ATAAAATAAAATTTTAATTATAAAGATTTAATTAAATTTTCAAAATTAAA
TTAAAATTTTCAGCTTTATTTAAATAAATATTTAAATTATTAAAAATTGA
TATTCATTAATTTAATTTGTATTTTGCCTTTTAATTTTAATAGATAATTT
TGAATATTTTAGAAATTTTTGAAAAAATATATNAAAAATTTGAATTTTTA
CATTTAATTTGCATTATGAAAATATATTCAAATTTGTACTTTGAATACAA
TTNCATTTTGNTTTTTAATCCTTTAGATCATTACTGTCAATAGAACACAA
ATTATGTGAAAATCTTGATTATAACAACATAATTAGTGATTTTGCTGAAA
TGAAGGCAAGAAAAACAAATTTTATGGAATAAATATATAATAATTTATGA
ATTATGTATGTCTTTATTTTATTACTCATCCATAGCCCAACAGAACAACA
CCAGACATGCGCAATAATAATTAAATTCAGTCGTCTTTGATATTTTGCCG
ACTTTCAGTCATATAAAAACCATAGCTTTACACATATTTTTCC
>rnd-6_family-2390#DNA/hAT-Charlie ( Recon Family Size = 62, Final Multiple Alignment Size = 61 )
GAGATCCATGAGTTCTCTGTGAGAATTTTANAATTTTCATTTCGATGATA
ATTCTAAAAAATTAATATTCATATTCTGGATCATCTGGATGACCACCTTA
TAACCGAGTACTGCCACGNNATTTCAGTGCCCGAGTTTGCATTTGTGTTT
ACTTGAAGTTAGAGCCGGGTACTACTTTAATTGTCGCGGGCTAATGAAGA
ACAGAGGCAGACTTAATATGAGAAATGATGCATTCGCGCCAAGTGAAGGC
CAAATGACATCACNGTGTACTGAACGAACGGAGGTCAGTAGTTCGAACAG
AGAAAAGTGGTGGGAGAACTGAGTCATCACACGGCACATGGTAGCAGGCA
TGCCAAACTCAAAAGAACCTGCGTTACAGCAGTCAGTACCATATTCACGT
TGCTGNTTCGTTTCGGCAAAACAACATCATCCGTCACATTAAATTAATGT
TAATTTGAATTTTATTGGTTTTATAGTTTTGTTTGTATTTAATTTGTAAA
TTTGTTTTGGTTTTATAGTTGTATAAGAGCTATAAGCATAAGGAGTTTAT
ACCTAGTTTTATGTTTACATATATTAAGTAACATTATAATAAACAAAACT
CGAGGAGCTAAGAGAATTTTTCCTTTAAAAGGGGATCTACATTACTCAAG
TTTGAGAAACAC
>rnd-6_family-207#LINE/L1 ( Recon Family Size = 72, Final Multiple Alignment Size = 61 )
AGATTAAAAACATTAAAATGAAAAGACAAATTGGGCAAGACTAAACTATA
GTGTCTAGGGATGCACACTTGGGTGATAAAACCATAAAGAAACGCAAGGA
AGTGATTACTATAAAAGTCAGGATAGTGGTTACTTTTGGAGAGGAAGGGG
TTGTGATTGGGACGGGGCACATGGAAGGGCTTCTGGGGTGGCTGGCAAAG
TTCTGTTCTTGACCTGGCGTGGTGGTTACAGGGTGTTCGCCTTATAATAA
TTCATTAAGCTATACATTTGTTTTGTGCGGTTTTCTGTATCTGTGTTTTA
TTTTACAAAG
>rnd-6_family-5377#DNA/TcMar-Tigger ( Recon Family Size = 108, Final Multiple Alignment Size = 60 )
TCGGCCCTCCGTATCCGCGGGTTCCGCATCCGCGGATACGGAGGGCCGAC
T
>rnd-6_family-864#Unknown ( Recon Family Size = 69, Final Multiple Alignment Size = 59 )
GGTTTATTAATTCCTGACGTTGAGCGTTTTTCCACGCCTTTTTCTGTAAC
AACAAAAAAAGAGAAAGAATACAAAATGTGCGTAAAATATGCCTCTTGAA
ATTGTCGTTTTGAAATATGGACGTCTTTTGAGATTTTTGCTCGATTTACG
ACCGAAGGATTTGTTTAGAGGGCAGGTG
>rnd-6_family-1220#Unknown ( Recon Family Size = 63, Final Multiple Alignment Size = 57 )
GAACCCCTGGGCCCGGCCCCACCCACCAGTGGGCCGACACCAGCCCCGGG
ACCCCCAGGGCCCTGCAGCCAGAGACCCCGGGACCCGGCTCTGCCCACCA
GTGAGCCAGCACTAGCCCCGGGACCGGCCTCACCCACCAGCGGGCAGGCA
CCAGCNCCGGGACNCNCTGGGCCCTGGCCCCACCCACCAGCGGGCCGGCA
CTAGCCCCGGGACCCCCAGGGCCCCGCAGCCAGCTACCCCGGGACCCGGC
CCCGCCCACCAGAGGCCGGCACCAGCCCCGGGACACCTGGGCCCTGGCCC
CGCCCACCAGCGGGCCGACACCAGCTCCGGGACCCCCGGGCCCGCAGCCA
GAGACCCCAGGACNCGGCTCCGCCCACCAGCGGGCCGGCACTAGCCCCAG
GACCCGGCCTCACCCACCAGCGGGCCNGCACCAGCCCCGGGATCCCCAGG
CCCCACNCACCAGCGGGCANGCACCAGCCCCAGGAACACCGCGGCCCCGC
AGCCAGCCATGTGACCAGNCCCACCCACCAGCAGGCCAGAACCAGCCCGG
GACCAGCTGGGCCCCGGCCCTGCCCACCAGCAGGCCAACACAAGCTTCGG
GACACCCCGGACCCCGCAGCCAGCTGTGTCAGGAACCGGCCCCCCCACCA
GCGATCCGACACCAGNCTCGGGACCCCCTCCCGGGCCCTGCCCACCACCA
GGGACACCAGCTCTGGACCCGCGGCCCTGCAGCCAGAACCCCAGGACCTG
GCTCCACCCGCCAGTGGGCGGGCANCAGCCCCGGGAGTCTCCTGGCCCTG
ACTCCGCCCACCAGTGAGCCAGCACTAGCCCCGGGGCCCCCTAGGGTTCT
GCAGCCAGCCGCCTCATGACCAGCCCCACCAACCAGCGGCCGGCAGCCTC
CGCACAAGGCAGGGCCTGGCAACCAACCGGACCGGGGGCCAGCCAAGCCT
ACCAGACCGCCCACAGTAGTCAGCCAGCCA
>rnd-6_family-128#DNA/TcMar-Tigger ( Recon Family Size = 61, Final Multiple Alignment Size = 57 )
GGGAAATGGGGCTCTTTTCGTTCCAAATGNAGAGTCAGTTACCCCAACAG
CGTTTACTGAATANTTCCTTTCTCAACTGATGTANAAACTTTATTGTGTC
TTATGTAATTTTCATATATATATATATATACACACACACACACACATACA
CACACATACATATATATGTATACATATATATATAAGTATGTATGCACATG
TGTGTATGTACTTGTGTATACACACATACACACATGTATATCTACATGCA
TACCTCGTTTTACTGGCCTTTATTGCGCTTCGCAGATACTGCATTTTTAC
AAATTGAAGNTTTGNGGCAACCCTGCGTCGAGCAAGTCTATNGGCGCCAT
TTTTCCAACAGCGTTTGCNCACTTCACGTNTNTNTGTCACGTNTTGGTNA
TTCTCGCGATATTTCAAGCTTTTTCATTATTGTTCTACTTGTTATGGTGA
TCTGTGGTCAGTGATCTTTGATGTTACTACTACAATTCCCTGAAGGCTCA
GATGATGGTCAGCANNTTTTNGCAATGAAGTGTTTTTTAANTAAGGTGTG
TNCATTGCTCTCCTAGACATAATGCTATTGCACACTTAANGGACTACAGT

>rnd-6_family-263#DNA/hAT-Charlie ( Recon Family Size = 59, Final Multiple Alignment Size = 57 )
CCGCGTTGTCCCATNTGGTAGCCACCTGCGNCTATTGANCACTTGAAATG
TGGCTAATTNGAACTGAGATGTGCTGTAAGTGTAAAATACACACCGGATT
TCAAAGACTTAGTATGAAAAAAAGAATGTAAAATATCTCATTAATAATTT
TTATACTGATTACATGTTGAAATAATATTTTGGATATATTGGGTTAAATA
AAATATATTATTAAAATTAATTTCACCTGTTTCTTTTTACTTTTTTAATG
TGGCTACTAGAAAATTTNAAATTACATATGTGGCTCACATTATATTTCTA
TTGGACAGCACAG
>rnd-6_family-782#SINE/MIR ( Recon Family Size = 63, Final Multiple Alignment Size = 56 )
GGGAGGCCATGTGGAGTCAGGTGGCAGCATGGCCTCTGCAGCCAAGTGAC
CTGGTCTGATCTTGGCTCGGCACTTACTAGCTGTGTGATCTTGGGCAAGT
CACTTCATTTCNCTGAGCCTCAGTTTCCTCATCTGCGAAACGGGGATGAC
AATAGTCCCTCTCTCGTAGTGTTGGGTTAAGGAATTGACACTTAGAANAG
TGTGGGCACATAGTAAGCTCTCAATAAAC
>rnd-6_family-3768#LTR/ERVL-MaLR ( Recon Family Size = 61, Final Multiple Alignment Size = 55 )
TGAATTGTGTCCCCCCAAAATTCATATGTTGAAGTCCTAACCCCCGGTAC
CTCAGAATGTGACCTTATTTGGAGATAGGGCCTTTGNAGAGGTAATTAAG
TTAAAATGAGGTCATTAGGGTGGGCCCTAATCCAATATGACTGGTGTCCT
TATAAGAAGGGGAAATTTGGACGCAGAGACAGACACACACAGGGGGAAGG
CCACGTGAAGACAACGGAGGCAGAGACTGGAGTGATGCANCTACAAGCCA
AGGAACGCCAAGGATTGCCGGCAACCACCAGAAGCTGGAAGAGGCAAGGA
AGANTTCTCCCCTAGAGCCTTCAGAGGGAGCACGGCCCTGCCGACACCTT
GATCTCGGACTTCCAGCCTCCAGAACTGTGAGAGAATAAATTTCTGTTGT
TTTAAGCCACCCAGTCTGTGGTACTTTGTTACGGCAGCCCTAGGCAAC
>rnd-6_family-143#LTR/ERV1 ( Recon Family Size = 55, Final Multiple Alignment Size = 55 )
TGAAACCGAGTCCCCCTAAAACCGAGTTCCTCTGCCGAGTTTATGATTAA
CCTCTCTATCCAAAACTTTATTCCCTTTCTTGTCCCGCACCTGTTCCCCT
CAAGATTGAGGAGTATCAAAGAAAAGGGGG
>rnd-6_family-3851#LTR/ERVL-MaLR ( Recon Family Size = 74, Final Multiple Alignment Size = 53 )
CTCCTTTCCTCANCCACTCTCCAGCTAGAGGTGGCCATGTGACCCAGATN
TAAATGGAAGTTGGTGAGGTTCCTGGGAAAGCTTTTGCTTTCCTGGTANA
GATGCTGCCCTGTCCTCTTCCTCCTTCTNTCTGTCTTGACTGCGAATGTG
AGAAAGGCCAAGAGAATCGCAGAGACGTCGGCCCTGACATCGTTGAGCCG
CTGAACCAATGCCAGCAACCGCCTACCTCCGGACTTCTTGTTANGTGAGA
AAAATAAACCCCTATTTGTTTAAGCCACTGTAGTCGGGTTTTCTGTTACT
TGCAGCCGAAA
>rnd-6_family-3551#LTR/ERVL ( Recon Family Size = 56, Final Multiple Alignment Size = 53 )
GTTACAGAACTGGGCTCNCTGATAGCAATGGGGATGATAGGATCCCGAAA
CAATAGAGGCCAGGTGGCGGCGCTTAACCGTCAGAAGCCAGGNGGNCGCA
ATTATCGTAACGAGTGGCAAGGTCAAGGGGGCTTGACCGCAGAGCTATGG
AGATGGTTAATAGAACACGGCGTCCCTAGGGGCAAAATAGATGGGCAGCC
AACAAGGGTACTGCTTAATNTATACAATCAAAAGAAATCAAGAATGGATG
ANCAGGAGGCTGAGGGCTAGGCCCAGTTCCCGAACCTGAGCCAGTTTTCA
GATCTGGAACCCACTGAA
>rnd-6_family-1237#LINE/RTE-X ( Recon Family Size = 71, Final Multiple Alignment Size = 52 )
AACCACGGGAGAAATTTCTCTCNGGTCTCAGNANCAGGAATAGTTGTGCT
TCTCCTGAGCAACTGGTTTGTTTTTATCTTNTAAACGCTGTGAATCATGT
TTCCCTCTTTCNCTTGGCCGCTAGGAAGCTCAGAGCCAAATTTGTGGCCC
ACCTCTAGCAAATGTANAGGACTTATTAGGGCCTTATTATTTTGTGACTA
ACCTCATTCCTGGCTTTGTTTTCTTTTCTTCACTCATTTTCCTTCTGATT
CAATTTCTTCATTTCTTANTTTTTATCAATTTTATTTTGTATTATATGCA
TCTTTGTAAGCTGCCTTAAATCCTTTNTGGAA
>rnd-6_family-323#LINE/L1 ( Recon Family Size = 56, Final Multiple Alignment Size = 50 )
AAGCAGGAGAAAACTGTAAGTCAACCATACAGCATAATTAAATATNCTCA
AACAAGCATTNGAGGATATGAAAAATNACCTTGAATCAGAAATTCAAAAA
CTAAAAGTAGAAAGGANAAAAACGAAGGAGAAATAAAAAGAGTTGACTGA
ACTCAGGAAAGAAATGGAAGGAAAAGAANAAAATTATCTCAGAAATGAAG
ANTAAATTACAAGNTGCCCAAGGAAGAATAGACTCAAATGAAAATTTAAT
AAGGGGCATTGAAGAAAGCCTGGGAAAAAACCAAGAGAATAAAAATGACA
CAAAGAAAGAAGTAAAAAGGGTCAGAGAGAAAGTAGTGGAATGNGAAGAC
AGGCAAAGAAGGAATAATATTCGTATAACTGGAGTCCCTGAAGAAGAAAA
ACAAAACAATGCAACAGAACTAATATTTAAAACTATAATCCAAGAAAACT
TTCCAGAAATAGAAAAAGACCTGAATCAAGCCCACTGGGAAATTGACCCA
GAACGATCAACTCTGAGACATTCCTGTAAAACTATTAGGCTTCAAAGACA
AAGATAAAATCCTCAAGGCCTCCAGGCAAAAAGATCAATTAACGTGTAAA
AGAATTAGACTGGCATCAGACTTTTCAAAAACAACATACAAAGCAAGGCA
ACAATGGAGCAGCATTTTCAAAAAAAACTCAAGAAAGAAAGTGTGAACCA
AGGATTTTATATCCAGCCAAGCTGTCCTTCAAGTATCAAGGCTACAGAAA
AACAGTTTTAAACATGCAAGAACTCAGGGAATNCTGTACCCATGAGCCTT
CCTGAGGAATCTACTAGAGGATGAGCTTCATCCAACAAGAGATGACTGGG
AAACTTCAGCAAAAGGACTGATGGTGAGCATATTAAAATATATCTAAGAC
NAAAATAGAAGAATGATGGTAGAATANTAATGTACAAATATTATATGTTC
TGACAAAGTAGAAANAACGCAACTAAAAAATGGGAGGAGAAAGGGAAGAA
AAGGAAAATAGAATAAGTCATTGCTATACAGGTAATAGGTGGGAGTCAAA
GGAATACCATTAAAAACTGACAAACCAGATAGTAAAAGGTTAAATAAGAA
AACAGGAGTGAAGNGCNTTAAAAAAGTGTAAGTACAAAGGTAACCACTAG
AACAAAAATACAAACCTTCCTAAATACCAGAAGAAANTTTTAAAAAACAA
AGAAAAGAANACATCCGTAGAGAAAGACACAGCAAATATAGCAAAATACA
CAATAATTATAAAATAATATGACAGAGTTGAGACCAAACATCAGTCATAT
CAATAAATGTGAGTAAG
>rnd-6_family-964#DNA/TcMar-Tigger ( Recon Family Size = 51, Final Multiple Alignment Size = 50 )
TTCTCGTTATCCGANTATTCATTATCACTCTGAGTCCCCGCAGTTATGAG
TTGCGTAGGGAAGCAAAAGTCGTCATAACACGAAAATATCCACTAATGAA
CTGACCACTTATAAAATTAGTCCCCACTCAAACATCCCTCCCCGCTTAAT
ACCAGCNTTTATCCCCACTCAGCCAATTTTGCTGATTGTAGACGTTATAA
ACATCCGACAATACAATGCAAATANAATGCAATCAGTTGCAAAGTGAAAT
TGCAAATCTTGCAAAAGATGCAGGATTTCATGAAGTCGATGAAAGTGATG
TTGGAGAACTGCTCCATAACAAAATGAGGATCTGGCAGAGTTAGACCAGT
TAACAATTGAAGAGAGAAAATCGACAAGGATGATGACANGATAGGCGCTT
CAAAAGAGAATGATTTGAATATCAAAGGATTAAGAGAGGCCCTTGGGAAA
ATTGATGAAGCCCTCGAATATTTTTGCAAAATGACCTTTTTATGATCGTG
CTGTGAAAGTCAACGTGAAGTAAAGGACGTCGNATCNTGCTATCATATAA
TTTTGTCGGAAAAATTACNCTCGCCAAATCAACACTTGATTTATTCTTTG
TTCATTCTAAGAATTAGNGCATAGTTGCAATTANAGTTGTTAATGTATAT
CTTAAAGATAAATCATATTTAGATAAGATAATTTTTAGTTTTTTCAAGAT
AAAGTCCCAATCAAACCTTTTTTTTCATTCTTCACTTTACAATGCTAAAC
TCTGTTTATTGCCTT
>rnd-6_family-2359#Unknown ( Recon Family Size = 50, Final Multiple Alignment Size = 48 )
GGAAAATTATGAGTTTGCTCTCTCTAAACCAGGGGCTTCCGTGGCCGCGG

>rnd-6_family-746#DNA/hAT ( Recon Family Size = 51, Final Multiple Alignment Size = 48 )
TGNCACCGTATTAAGTGAGAGGAATGGNTGAATCCGGCCGCGTTTTGGGT
TCGNCGAACGTCTCAAACTATTTTTCAAACGTTTGGGGTTTGGCAAAANC
CAAAACGCGTTTTGCCAAGCACTTTNCCCTTAATTTTTAAACCCATGTGT
ATTTCAAGGGAAATTTAATCCATATGTTTCTGATTCATTTACACTTAACT
CATCAAAATGTTGTTTTGTAAGAGCTATTTGATGTCCAAGAAGCTTATGA
GCCCTTTTAAGCCTTCTTTTCCTCTTCTTGAAACAGGAAGTTGCGTTTTG
CCAAGNATAAAGAANCTGAGCCCCNAAAGGCTTGNGNTCAGTTTGAAATT
TANAACCCCTGAAGCTTAAATGGNTTC
>rnd-6_family-1395#LTR/ERV1 ( Recon Family Size = 50, Final Multiple Alignment Size = 47 )
TTGCAGTGGTCCCTACACCTATCGCGATGGTCCTGAATAAAGTCTGCCTT
ACCGTTTTAACAAGTGTCATGAATAATTTTTTCTTTAA
>rnd-6_family-1233#LTR/ERVK ( Recon Family Size = 47, Final Multiple Alignment Size = 47 )
GCATTTGGTGCCGAAACCCGGGAACTTCGCGCCCTGCATGGAGGACCGAT
TCAGAACTCGACACACGGAGTGAACCGTCGGATCAAGATCCGATCTGGGT
GCCATCAAGACTGACGAGAATTGTTGAAGAAAACTTCAGAGAAGATGCTG
AGCTGGATGTTCCTGATGATTCTTCCCTTGCTTAGGGCAGAGAATATGAC
GTTCTGGGGAATTAGCCGGACCTGGCCAGTTCCCATGCCGGTTCACTCTC
AGAGCAGAGTTCTTCCAATATTTTATTCCACTAGTTGTGAAATGAATACG
GCCTGTACCCAGCCATTGAATTATGACTGGGCACCGTATAATGCCAGTGA
TTTTATTTTGAATCGAAGTCTTTGTATTAGTTGGAATTCCACAAAGGATT
GTATCCTTTTGGCCAGGATAACCTTGACCACTTGGAACAATCCACTTAGA
AATAATTTGGTTCCATTGAATATGTTGAATGAAGCTTTGAGCAAGATAAC
TCAAGGCCACACTTCAGGTTCAGGTATAGGGAATTCCAGTGAAAATGAGA
TGAATATTACCACTTTAGTTTTGGAACATACAGGGATAGTTCCTTTAAGA
AATAATGCTTCTGATAAAACAAGTGCCAACAGGACTGTTGTCGCCCCCTA
TTGTGAGCCAGTCACATCAACACCCCCAGTCTTTACCCCTTGTCAGGGGG
GAACTTATGCTAAGTATGAACTTAGTTCAGGCTTTCAATTTTCCCCTGAT
TTAAAGTCCTATATGGGAAGAAAGGAAAAAGGAAATGATACTAATGAGAC
AAAAGGAAATGATAGTACAAAGTGGTATTTTGAAGGATGGCCATTTTATT
CTTGGTTATTAGTTAATGAGGCAGGAGTAGGCATGGATATTTCTGCTTTG
GCCACTTTACAGATGCCCTGAATAGGAGTGCAGAGATTGGAGAATTCCTA
AAGGGAAACTGGTCTCAAGAAGCTGAACGGATGATATTTAAGCAAAAGAT
TCAGATTATGCAACTGAATGCTACCAAGCTGGAACCCGTTACCTTTGGAG
ATTTTACCTCTTGGCTCTCTTCTGCCTTTTCCTTCTTTAAAGAGTGGGTA
GGGGTGGGGATCTTTGGGCTCTGCTGTATATTTGGGATTATAATATGTCT
CTGGTTGGTCTGTCGCATGCGCGTCAGGGCACATCGAGATAAGGTCCTAC
TCACTCAAGCGCTTTTGGCTGTTAGTGAAGGTGATTCTCCCGCAGCCTGG
ATCTCCGTCCTAAACAATTCGAATGGATTGCCCTTGCACGGAGAGGCCCT
GTTGCCATTGCACCTCTATAGGGAATCAAAACTTATTCTGAGTCAGCCTT
TGCACCCTGCAGCCCTTGTTGGCATTGCACGCAGGAAGGTGTCTCAGACA
TGCCAACGGAAGGCTGCCCTCGAACAGTGAGCACATCATGAGGTGAACAC
TTGTACGGGCTACATTCTGCTTGGTGATTCTAGTAAATAAAAAAGGGGGA
GATGTAGGGCGCGGTCAGCTAACTGCCACGCAGCAGGAAGCTGAAGTAAG
CTGAGTCATCCTTCCTGTGGCCACTGCGCTTGCGCTAAGTATACTAATGA
GGTTTTAAAGTAGCGACCTATCCGATGCTGGCTCACAAGTCGCACCATCG
GCGAAAGCCAATCACAGAGCGACACATGTTCTTAATCCCTATATAAGCAG
ACTGCTATAGGATTGCGGTGTCTTCCTTCCATCTTTTCTTTAACCAAGCT
GTGCTCCAATAAAGTGTGATACGAGAAGAATCTTGCGTGTGGCGACTCGT
CATTCTGCTGGTCGGAGGCGGCTC
>rnd-6_family-641#LINE/L2 ( Recon Family Size = 51, Final Multiple Alignment Size = 47 )
ACCTAGCACAGNGCCTGGNACTGGTGTTAAGTAATTGGTAGCAATTACGA
CTATTATGTCTNTAAATGCCTGGAGAACAAGGGGTGTCTTATTTATTTTA
TACTCAGCGCCAAGCACAGTGCCTGGCACNCAGCAGACACTCAATAAATA
TTTGCTGAATGAATGAATGAATGAATAAATGAATGATGAAGATGACGATG
TTGTTCCGTACTACCAATCCAGCATTTACATAGTTAANATNTATTATCTG
GTTTTCAGGATCATCTTTAT
>rnd-6_family-2843#Unknown ( Recon Family Size = 51, Final Multiple Alignment Size = 46 )
ACCCCATTATAGAAATAAATTTTAAAAACAAAACGCTGAAACAGTGAAAG
AGAGAAAAATTCTTACAAAATTCGCTCAGGGGCTGTGATGCAACCTGGAT
TGACCACATCTANACCCACAGCTGGATGAGACATAAGGCTGGACA
>rnd-6_family-551#SINE/MIR ( Recon Family Size = 49, Final Multiple Alignment Size = 46 )
TGATTGNAAATTCTACNTTTTAAAATTCTCAACCTCCGTAAACATATNGC
ACTGACAGGATAGTATGGTGGNTACTGTGGTCAGATAGGCTGGATTTGAA
TCCCGGCTCTGCCAAGCATTAGCTGTGTGACCTTAGACAAGTTACTTAAC
CTCTCTGAGTCTTAGTTTCCTCANCTATAAAGTGGGAATAATAATAATCT
CTCCTTACAAGGATTGTTGTAAGAATTAAATGAGNTAATNTATGTAAAAN
ACTTAGNACAGTGTCTGACACNTAGCAAGTGCCACGTAAATGTTAGCTAT
TATGATGATGACGATGATGGCGACGATGNTGACATTCATG
>rnd-6_family-1165#LTR/ERV1 ( Recon Family Size = 49, Final Multiple Alignment Size = 46 )
AAGGCCAACTGGCCCGAGGCAGGGGAACGCAATCAGATTCACAGGTTGCA
TCAGACCGAAACTCTCCGGACCACCCAGTTCCAGAAACTGACCTGGAGAC
NTTCCGGACCACCCAGTTCCAGGAACTGACCTGGGGACTTTGAACCCGGC
CCAGCCTTCCCGCCTTTCGAGGGGCGGGACTAACGGTCCCCCAGGATACC
CGAAAAGACCACCAAATAAGGAATACCCTGCGCCCTCCCAGATTCACCAC
ACCCCTTTCCCTTCTTCCCCTATAAAATCTTGCCCAACCCTCGCCCGGGC
GCGACTTCTCTGGCCCCTTTCTCTCGGACCAGTGAACCTCGCCCGGGAGC
GCTCCCTAATAAAGCTCGCTTGAAGCTTTCCTCCGTTTCGCGGTGCCGTT
TGTTACTTCTCTGGCCCCTTTCTCTCGGCCTCGCCCGGGAGCGCTCCCNA
ANAAAGCTCGCTTGAAGCTTTCCTCTGTTTCGCGGTGCCGTTCGTTAC
>rnd-6_family-5061#LINE/L1 ( Recon Family Size = 47, Final Multiple Alignment Size = 46 )
TTATTATGGGATTATATGAAATCATGTGTGTGAAACTTTTGAAAATTGTA
AAGCACTATAGAATTTAAAGAATCTTTCATTCAATAAAAAAA
>rnd-6_family-7433#LTR/ERV1 ( Recon Family Size = 47, Final Multiple Alignment Size = 45 )
ACTTGAACAAAACACTAACATGGTTTCTAACAGCTCAAGGCCGCGTCCCT
AGGATGACCCCAGCCCCCCTTAAAGTGCCTGCCTGAGAAAACTCAAGGCT
GCCAGAAGAATTTACTGTTTGTTCCAGCCAA
>rnd-6_family-1872#DNA/hAT-Charlie ( Recon Family Size = 48, Final Multiple Alignment Size = 44 )
AATTATTTTGTTATCGAATTAGATGGCAAAGCATTGTGTTTATTATGCAA
TGACACTGTGCTAAAGAATACAATATACGTCGACATTACCAGACTAAGCA
CTCATCACAATATTCCCAACTCACAGGAAAGCAACGGTCAGAAAAATTAG
AAAATTTAAAACGGAATATCTCATCACAGCAGAATTTCTTCACAAAAATA
AAAAATGAAAATGAGGCTGCAACCAAAGTAAGTTTCCGAGTGGCTCATTT
GTTAGCCAAGCAAGGAAAGCCGCTTACCGATGGTGAGTTAATTAAATCGT
GTTTGATTGCAGCAGCCGAAGAAATGTGTCCAGAGAAAATAAATTGTTAA
GACTATTAGCCTTTCGGCGAGAACAGTTGCTCAAAGAGTTGAGGACATTG
GGAGCAACATCAATAGTCAATTAAAAACAAGGCAAATGATTTCGAGTGGT
TTTCCTTGGCTCTTGATGAGTCGACAGATGTTACCGATACCGCTCAGTTG
TTTATTCGAGGAGTCAATGCTGAGTTTGAAGTGACTGAAGAATTAGCCTC
TATGAATAGTCTGCGTGGAACAACTACAGGTGAGAATATTTTCAAAGAAG
TTGAGAAAACACTAATTCAGTACAACCTGAAGTGGAATCTGCTAAGATGT
GTTGAAAGTCTTAGTACAAATTTACAAAGCTTGTGAAAATGTAAGGTGTG
TAAAGCCTATGNTTATTCATTGTATTATTCATCAGCAGGTACTTTGCGGA
AAATATTTGAATCTATCGTGTGTTATTGAACCAGTAGTGTCAATGGTGAA
CTTCATTTGNTTTCTCATGGACTTAANCGTTGTCAGTTCCGTGAATTTTT
GTCAGAAATAGAAGCTGAATATCCTGACTTGCCCTACCGCACAGCAGTTT
GATGGCTTAGCAGTGGTAAAGTTTTACTGCGATTTTTTGAGCTCAGGGCC
GAGATTGAAATTTTTCTGAACGGGAAGAACCGCCCTCAACCACTATTATT
GAACACTGAATGGCTTTGGAAATTAGCTTTTGCTGCAGACTTGATAATGT
TTCTTAATGAATTCAACCTAAAATTACAAGGCAAAACAGCGCTTATATGC
GAAACTTATACTGCGGTAAAGTCATTTCGATGACAACTAATGTTTGAATC
ACAAGTAATGTCAAGCTGCTTTATANACTTCCCGTGCTGTCAAAAGTTAA
AACAAGAAGTGAGATCTCCATTCCCACACAAATTTGCAGCGGATATATTT
TCTGAGCTCAAACTACAGTTCCAGCAGTGTTTTTCGGACCTCGATGCAAG
TGCAAAGGAAATTTCCGTATTTCAAAATCCATTTAACCGTGCAGTTGAGG
AGCTTCCACCTAACCTTCATTGGAAGCGATTAATCTGCAATGTAATGACA
TGCTAAAAGGCAAATATCAAGAGAAATCTAATAGAATTCTATAAATGCCT
TCCAAGCGATGAATATGCTCAATTAAAATCATATGCTCGTGGACTGATAT
CAGTATTTGGCAGTACCTATCTGTGTGAAAAGACATTTTCAAAGATGAAA
TACGTAAAATCTCNTTACAGATCAGCATTAACAGATGAACATTTGCAATC
GATTTTGATGATAGGGAACACTAACTTTGAACCCCAATTAAGCGAAATGT
TATCCCCCAAAAGAATTCCATTCTTCTCATTAGTAGACCTGTATTACAAA
AAAATTGTACTCAATTATTATATTTTGAATTTCGTCAATAAAAATTTGTG
GAAATTTGTTTTCTCTTGTTATATAAGTACCTACATAATATCCTCGATTT
TGC
>rnd-6_family-932#LINE/L1 ( Recon Family Size = 47, Final Multiple Alignment Size = 44 )
TAAGAATCAGACCCGCAAAGACTNCAGATATTGGAATTATCGAAAAGAAT
ATAAGTATGTTTAATATGTTTAAAGAAATAAAGAGGAGATCGAAATATGA
GTAAGGAACAGGAGACTATTAAAAAAATGACCAGGCAGATTTGAAAAAGA
ACCAAATAGAACTTCTAGAAATGAAAATAATTCAACTGAAATTAAAAACT
CAATGGACGGGTTNAACAGCAGATTAGACACAGCTGAAGAGAGAATTAGT
GAACTGGAAGATAGATCTGAAGAAATTACCCAGAATGTAGCACAGAGAGA
AAAGGAGATAGAAAATATAAANGAGAGATAAGAGACGTGGAGGATAGAGT
GAGAAGGTCTAACGNAATTCTAATCATANAGAGTAGAGGCAATATTCGAA
GAGATAATGGCCGAGAATTTTCCAGAACTGATGAAAGATACCAATCCTCA
GATTCAGGAAGCNCAACGAATNCCAAGCAGGATAAATAAAAAGAAATCCA
CACTTAGACATATGGTAGTGAAACTGC
>rnd-6_family-2332#LTR/ERV1 ( Recon Family Size = 44, Final Multiple Alignment Size = 44 )
TTTGAGAGGAATCCGAACGAAACAGCCTTGCTAAGTTCCCCCAGTTTACT
ACACTTACCTCATACTCCTTGACCTATCATATTTCTCCACGACTNTCCAC
TCTTCATCAAACCTAGCATAAAAATACTCAGGTTTAACCGTTTCTTCGGG
TCTTCATTTCCTTATGAAGGCTCCCGTGTCACGTAAAACTTATATTAAAT
AAATTTGTATGCTTTTCTCCTGTTAATCTTGTCAGTCTATCTTCAGACCC
AGCCAAGGACCCCAAGAGTCAAGGAAAACTTTTTCCTCTT
>rnd-6_family-1188#LTR/ERVL ( Recon Family Size = 52, Final Multiple Alignment Size = 43 )
GTTTGCTGTATTGTTTGAGAATATTCAATTCTGCTATAGAAGACAAGAAA
ACAAATGGGATGGATGAAACTCATAAGAAGTGTTAAGCATAGATAGTAAG
TAAGCTAATACTCAGAGACTCAGTTAAGTATAGATAATGAGGAGCTTGTG
AGACATAGGCAGAATTCATAAGATGTGTTAAATATAGATAAGTTAGTAAC
CTGTAAGACATGTCAAAGTAGAAAATATGATGGAACAAACGAGAGTTACT
TATAGATAGAAAGGGATGGAAAGACCAAGTCATGATCATGCCACCTCTGG
GCTGACAGCTATGTCATCCCTAAATCGGCCACCCANTATGGTCCCATTCT
GGCCCACATGTGCTCTGCCCAAGAAACGCAGATAAAACCCATGGCTGTTC
AGCAGGCTAATTGGCAAGCTACAGCTGTGGCCAGGCGTACTTGTCCCTGC
TCTCTCCGATAGAGCAAGTGTGTGTCATTGGCCCCAGGCACCTTCCGTCC
GTGGGCCCCTTGCTCAAACCTCAACTCTGGTCCTCGTAACCACACCATCA
GCGGGGAAGGCTGATGCGGCAGAGAGAGAGACAGGACACATGAACATTGC
GTACCCAGGATTCAGGTAGTGTGGTCCTTCCTCCACCTGCTTGCACCCTA
AGTGTGTTAACTTACCCCATCTCTTTCCCCTTGCTTCTCGCTGTGTGTTT
TAAATTGATTTAATAAACCGTGTGATTCGAGCATCTTAATTTGGTCTGTG
AGCCTTTCTGTTCCGTGACCTCTGGGATAGCTTGCCTGGTAGTGTACTTG
GAGGCTACCATTGCATCAAGGTAATTTCCCACA
>rnd-6_family-3300#Satellite ( Recon Family Size = 44, Final Multiple Alignment Size = 43 )
TTTCGTTGAGCAAGGAGTAGCTCTTGTCTATTNCATATTTGGCTTANGGA
ACTTTATCTGTGCTCATTTCAATCTCTGGT
>rnd-6_family-2922#LTR ( Recon Family Size = 45, Final Multiple Alignment Size = 43 )
GTGCGTGACCACCNNCTTTAGTTCATGGAGTCCCTNACGCAGCGTNTAGA
CNGGAGCTCAGGATGTCCTATNAGTTTCACCGACAAGAATCCAGTNAGCG
TCCTGGTCAAAAGTCATCTNAGTAGTTGACACTGCATTTGATTNCCGGAN
AAGTTGTAANCTTCTTTTAACCNCGGGAAGATTTAGAATTAAGTATAGAA
ATATTTAAGAGAATCAAAACTTAATATTAATTTTTGTGTTAAAAGGAATC
TGTGCATATTTGGTATTTTAAGTATTTGTAATGTTTAAGAGAATTTGGCN
TATTAGAGTAACAGATCAGCCTTGTGATTCCAATTTAAAATGTGTAATTG
AGTAATTGATTTAGACTTGTGATTTTAAGTTGAAATCTTACTAAGTTATA
TACAGTATTGGAACATTTAAGAGAACTTAAGGTTCACCATATTTATAAGT
TTAATTTATTAGATTTATAAGAATTATTTAAGTACTCGGGAAGGTTTTTT
GTCAGACAATTGAAGTACTTAAAGGAAATCGAATATATTAAATTTATAAA
TGCAGTTTAAAATGTTTGAAGGGATTTAATTAGCTAGTTTATAAATGGGA
CCAAACATTAATCAAAGNCCCCTTAAAAGCGATTGCTAAAATTTGCTAGA
TTATAAATAGAATTAGATTTGTAAGCTGAACTNAAAAGCTTAAGGAAGAA
CTAGGTTTTTAAATTTGTAACTTTAATAAATCGAATATTAATTTTAAAAC
CAAAGTANCCTCTGAATAGTCTTTTCTGTGCACAAAAGCCGCCCTCAAGG
ACACCAAAAACCTCACGTTT
>rnd-6_family-1310#DNA/hAT-Charlie ( Recon Family Size = 44, Final Multiple Alignment Size = 42 )
TCCAAAGTGGGGTGCGCGCACCCCGGGGTGTGCGCAAGACGATCCATTGG
ATATAGGAAGAAAATATTAGAACTTCTATTTATTTTTATCTCATCCTTTT
AATTTCTATTTTTGTGTATGTTTTATAATGTACATAATATATTAGTACAG
TAGTACATGTATATAATTTATAAATAAATATGCATATATTGGGATGCATG
CTCAAAATTTTTTTTACTGATGGGGTACACGATCAAAAAATGTGG
>rnd-6_family-1855#LINE/CR1 ( Recon Family Size = 55, Final Multiple Alignment Size = 42 )
TCTCTGCCCTCGGCCCTGTCCTGCTCAACATTTTAATGACTTGGATGAAG
ACATAGAAGGCATGCTTATCAAATTTGCAGATGACACAAAGCTGGGAGGG
ATAGCTAATATACTGAGTGACAGAATCAAGATTCAAAACGATCTCGACAG
GCTGGAACGATGGGCCAAANCTAACAAGATGAAATTTAATAGGGATAAAT
GTNAAGTCCTGTATTTAGGTTAAAAAAAATCAACTGCACGAGTACAGGAT
GAGAGGAAAT
>rnd-6_family-1112#Unknown ( Recon Family Size = 44, Final Multiple Alignment Size = 41 )
GCCTGAGCAGGCCTGGGTCCCAAGGCTGGACTGTNNTGGGGCTGAGGGAG
CCGGGGAGGAGGACGTGCCAGCTGACCAGCGGCCCCTCGGACCTGTAGTG
CCCGTTCCCCCCTGCGTGGNACCACAATCTCCNGATCCAACGTGGCCCTC
CTACGGCTAAGCGAAGCCTGGTGCACCCAAAGGACGGTGGAGCNTCTGGG
NNGGAAGAGCTNTGAAGAAACCGGGTCTCCACGGCTCCTGCTGGTCGGGT
TCCCGCCTCCAGCCCCCTTCCTTAGAGTCGCCCCACCTGCGAAGCACGGC
ACCCTCCGAGTAGCCCACTTGCAAGNCTTGCGATATGCCTGGGGTGGGGC
AGTGCAGGTTAAGGGGCAGGAGT
>rnd-6_family-1300#LINE/L1 ( Recon Family Size = 41, Final Multiple Alignment Size = 41 )
TGGCAGGCCAACGCTCCCGCTGNAACAACTAGAAAAAAACAAGTAAATTG
CAAAAATCGTATTTTTAAAGACATCGGAGAGCTGTGGAAGCAATGAGGAC
TAGATGAACTAAAATTCCGGAGAGGGAAGAGCCNTTCCGAGGTGAGCTGA
NCGTCGCCGGCCGTTTTCTTCCCTGGGGGCATTTGCCGATTCTGGGCGCG
GGCTGAGGATCGGGCTTGGCCCAGGCAGAGGGACTTCTGCGGGAAAGAGA
AACCAGCAGAGCTTTTGGCGGTCACGTGGAGCTGGCGTGACAGATTGGAA
ACTNGAGGAGCCCCAAACGCACGGCCAGTTTTCCCACGGGACGTTTGCTG
AGTTCTGGGGCGGTGCGGGAGGCTGCTGGTTGGCCCGGAAAGGCAGAGTG
AAATCTCGCAGTCTCGCGGTACTTAGGAGACAAAGTCCCGCTAGAGGGAG
GGGCCTGCNTCAAACACACAACGGGTCTCCCCCTCAAGACATTTGCCAGA
TTTTGAANCTGCGTGGGGCAGGAGGCTAAAGAGCTAAGCTCAAAACCTCT
GAAAGGCAGAACTTTAGGGNTGAGGAGACAGAGACCCGCCAGGCTCTCAA
TCAAAAGCCCGGAAGGGCCACNCCCGAGGAACGAGGCGAACCAGAGGTGG
ACTGAGTCTTACTAAAACTACAACCCAGCCCCGGCTCAGCTCAATCCCTG
AT
>rnd-6_family-2634#Simple_repeat ( Recon Family Size = 45, Final Multiple Alignment Size = 41 )
TGATANANATAGATAATNGACGGATGGACGGATGGGTGGATAGACGGATA
GATAGACAGATAGATGATAGATAGATAGATAGGCAGACATAGATGATAGA
TACAGATAGAGATAAAAGATGGATAGATAGATGGATAGATGGATAGATAC
ATAGATGATAGATATAGATGATAGATAGATAGANATGATAGGTAGATAGA
TAGATAGATAGATAGGACACATAGATGGACGGATATAGATGACAGATACA
GATGGTAGGTAGATAGATAGATGATAGATGAGATAGATAGATAGATAGAT
AGATAGATGAGAGATAGGTAGANATGATAGATAGATAGATGATAGATAGA
TGTAGATAGATAGATGATGGATAGATAGATAGATAGATGATAGATAGATA
GATAGATAGACAGACAGTATACATAGGTAGATATATATAGATAGACAGGT
AGACGACAGATAGATAGATGGATAGACAGGG
>rnd-6_family-100#DNA/TcMar-Tigger ( Recon Family Size = 41, Final Multiple Alignment Size = 41 )
CCCCTGATGCCACCTCGAAATGAGATGCGCGCCTGCATTCCAAGTTGGAA
NCTAAAATGCATTTTCCCACAGAAACNACGTTATAAATGGTGAGTTACAG
TTAANATAGTACTNTTAATAGTAAATTTAGGTACATTATGGGTTAAATAG
ACTTTTGTGGGCTGGCCTGGGAACCTAACCACCATTTATAACATTGTTTC
TATGGGAAAATGCATTCTGAGTTCCAAACAACCGACTTACAAACGAACTT
TTGGAACACAACCTNGTTACAANGTTGGGGACTG
>rnd-6_family-3286#LTR/ERV1 ( Recon Family Size = 42, Final Multiple Alignment Size = 41 )
AAATCAAACACAAATGGAGACCAGNCTTGAAAATTCCCTGAGCAGACAAA
ACCANTTAAGCCACGCAAGCAAAACTNAATCTAGCTTATTTCGCGAGCAT
AAGCGAAACTTAACTTGGGTCATTTCTTGTNNATGCCTCTGANAATCATA
AGCGAAACTTAAGTCGTTTCCCAAAATNGTATGAGGTAACCACTAACCAA
TCCCCTGCCGTCTAAGAAAACTCCANTGTNATAACCAATCACTGTAAAGA
TTAAACNACTNCCTCCTCACTNTATAAGCCGCCCTATAACGNCATGCCCC
TGAGCCTCATTCCATGTTTTGGTTTGAGNGCTCCCGGTTCGCGAACTGTT
CTTTTGGTGTGTGCACAATAAACTCTTACTAANTACTACTTCANTGATTC
GNTGGTTTTACTTTTGCTATTTCTGGACTTTTG
>rnd-6_family-4544#Unknown ( Recon Family Size = 42, Final Multiple Alignment Size = 39 )
TTATCGCCGTCACCATCACCACCACCGCCATCATCACCATCACCATCATC
ACCATCACCATCACCACCACCACCATCATCGTCATCATCACCACCATCAT
CATCACCACCGTCACCACTGTCACCATCACCACANCACCACCGCCACCAT
CACCGTCACCACCATCACCACCACCACCATCACCGTCACCATCACCACCG
TCACCACCACCACCATCACCACCGCCACCACCACCGTCACCACCATCACC
ACCGTCATCACCACCACCGCCACCACCGTTACCGCCACCTACTCCATGCC
AGGCACTCTATCGGTTGCTTTATATGTTTTCT
>rnd-6_family-562#DNA/hAT-Charlie ( Recon Family Size = 42, Final Multiple Alignment Size = 38 )
ATGGTATAAACATGGCACATCTTCCTGGAGCATCAATTACTCAAAGATAT
TGGGGGAAAACACATCATTTTATATTAAAACAGATATATATTATGGAGTA
GAATGCAAAATTCGCATGAATTTTTAAGATAAAACAGAGACTTCAAAGAA
ATTTCACGCTTGCCGCAGNTCCCTTGGGGAGCACGTTCATCTTCTCTCCC
TTAGGGGCACTTCAGTGGGAAACGTTTGAGAAGCAT
>rnd-6_family-4481#LTR/ERVL ( Recon Family Size = 45, Final Multiple Alignment Size = 38 )
GGAGTCCGGCTCCNGGCCAAAAACCTATGTGTGATTTTTCAGGCCCGACC
ATAGGCAATTACAAAGGCTTTACCTGGCAGGCCTCACGGGGAAAGCTGCC
CTCCCCACACCAGACTTGGTGCACAGCCAGTGCACTGCAGTCTCTGAAGG
GAGTTGCAGTCAAGGACTCAGGCCCCCCTGGCCGGCCATGCTCCACATAT
CTGCATTCCTAGCCCAGGCGCCTCCATTCGGAGGCCTCTTTATCTGAGGC
CTTGGGCAGAGGCCTTCCTCAGGCGCCTCTGCCGAGGCCTCCTTATGGGG
TGGGGGAGGAGGGGGAACCTTGAAGACACTTTTCCCCACTCTGACTCAGT
ACCCAGTACTTTTCCACTCCTAGCCCTTCCCTCTCNCCCTCCCTCCGCCC
CCGGGTCCATAAAACTGCAGGAGCCTTTTGTTCGGGGCTCCCTCGGCAGT
GAGACGACCCCCACGTCTGCGCTGATCCACCACTCGCCGTTCCATGGGGG
AAAATGGAACAGGGGAGTCTGCTTTCTCCGTTTAGCCTCTTGCTTACACT
ATCGCAGTAAGTGATTAAAGGCTTGACTGTTACTTTCATTTTTGGCTTGT
TGCTTTAATCGGCTACTCCGACACCTGGCAGCTCAGCTCTCTCCCAGCTC
AGCTGAGC
>rnd-6_family-550#LINE/L1 ( Recon Family Size = 47, Final Multiple Alignment Size = 38 )
TACATCACCTACGTAGTATTCCTGCCAAAAATGTTTAACCTGAATCTAAT
CATGAGGAAACAGACAAATCCAGAATGTGGACATTCTACAAGACAACTGG
CCTGNATTCTTCAAAAATGTCAATGTCATAAAAGACAAAGAAAGGCTGAG
GAAATGTTCCAGATTAAAGGAGACAAAGACATGAACGCAATACGTGATCC
TNGACTGGATCCTGTACGAAGGGAAAATAAAGAACGTTATTGG
>rnd-6_family-3567#LTR/ERV1 ( Recon Family Size = 40, Final Multiple Alignment Size = 38 )
CCTGTCTCCCAGCCTCTGTGGGAGGGCAGGAGCCTAACTTCGATAAGCGC
CAGTTAGCAAACCCAGATGGGTTTCACATGGACCAACCCTNCCTTCCCGC
TTTTGTAATTTTCACTTCCCTGACTCTACTGAGCCCCTACTCGCCCCCTC
CCTACTCCCTCATTCTCCCTTTAAAACGCCCAGTCACCTCTGTACAAATC
GAAGTGGAGTTCAGTTCACGCTGGACTCTTTTCCCTACTGCAATAGTATG
TTACTGANTAAAATCTGTCCTTACCACTTTAACTAGTGTCCGGCTTTGTT
TATCTTTGA
>rnd-6_family-3705#DNA/TcMar-Tigger ( Recon Family Size = 38, Final Multiple Alignment Size = 38 )
TGGAAAATTGGAGATTTGCGACAATTTGAAAAAACTCGCAGACGAACCGC
GTAGCCTAGAAATATCGAAAAAATTAGGTATGTCATGAATGCATAAAATA
TATGTAGATACTAGTCTATTTTATCATTTACTACCATAAAATATACGCAA
ATCTATTATAAAAAGTTAAAATTTATCAAAACTTATGCACACAAACACTT
ACAGACCATACATGGTGCCATTCGCAGTCGAGAGAAATGTAAACAAACGT
AAAGATGCAGTATTAAATCATAACTGCATAAAATTAACTGTAGTACATAC
TGTACTACCGTAATAATTTCGTAGCCACCTCCTGTTGCTATTGCGGTGAG
CTCAAGTGTTGCGAGTATCCGCTTAAAACGCCGTGTGACGCTAATCATCT
CCGCGTGAGCAGTTCGTCTCTCCAGTAAATTGCGTATCGCAGTAAAAAGT
GATCTCTCGCGGTTCTCGCGTATTTTTCATCGTGTTTAGTGCAATACCGT
AAACCTTGAATAACACCGTGGGACCCATACGAAGTGCCACTAGTGATGCT
GGAAGTGCTCCCAAGAAGCAGAGAAAAGTCATGACATTACAAGAAAAAGT
TGAATTGCTTGATATGTACCGTAGATTGAGGTCTGCAGCTGCGGTTGCCC
ACCATTTCAAGATAAATGAATCCAGCGTAAGGACCACTGTAAAAAAAGAA
AAGGAATTCGTGAAGCCGTCGCTGCAGCTACGCCAGCAGGCGCGAAAACC
TTGCACTTTTTGCGAAATACCTTTTTATCTCGTATTGAAAATGCAGCTTT
TATGTGGGTGCAGGATTGCTATAAGAAAGGCATACCTATAGACTCTAATA
TGATTCGAGAAAAAGCGAAGTCATTATATGACAACTTAAAGCAAAAGGAA
GGTGAAGGATCTAAAGCTGGAGAATTTAATGCCAGCAAAGGATGGTTTGA
TAATTTTAGAAAGAGGTTTGGCTTAAAAAATGTCAAGATAACAGGAGAAG
CAGCTTCCGCCGACCAAGAGGCAGCAGATGAGTTCCCAGATGCTATTAAG
AAAGTCACTGAGGAGAAAGGATATCTGCCTGGACAGGTTTTTAATGCAGA
CAAAAGTGCCCTATTCTGGAAAGAGAAAAATGCCACAAAGGACATTTATT
AGTAAGGAAGAGAAGCGAGCACCAGGATTTAAGGCAGGAAGGGATAGNCT
AACNCTACTGTTTTGTGCAAATGCAGTCTG
>rnd-6_family-5344#LINE/L2 ( Recon Family Size = 50, Final Multiple Alignment Size = 38 )
GCTTGCCCTTCCAGCCCCTCCCGTGTCATGTGCTNACTTCTGACCCGGGA
CTCCANGACTTAGTCCTAGGTCTTCTCTTCTCNCTCTCCCTAGGTGATCT
CATCTACTCCCATGGCTTTAAACACCATCCGTATGNTGACAACTCCCAAA
TTTATATCTCCAGNCCAGACCTCTCTCCTGAACTCCACACANACGTGCAA
CTACCAGATGAACATCTCCACTTNGATGCTCACTGGCATCTCAAANTAAC
ATNTCCCAAAACTCTTTTAATCCCCTCACAACCTACTCCTCCCCAATCTC
CGGTCTCAGCAAATGACATCANTGTCTTCCAGTTACTTAAGCCAAAACCT
GGAGTCGTCCTTGACTCCTCTCCCTTTTCACACTCCACATCCAATCCATC
AGCAAATCCTATCGNCTCTACCTTCAAAAGTATCTCAGAATTCGACCGTT
TCTCACCACCTCCACTGCTACCGCCCTAGTCCAAGCCACCATCACCTCTC
ACCTGGACTATTGCAATAGCCTCCTAACTTCTCTNCTCGCCNCCCCCTGC
AGTCTATTCTCGGCACAGCTG
>rnd-6_family-515#Unknown ( Recon Family Size = 67, Final Multiple Alignment Size = 37 )
TCTCTAAAACGTATAACACTACTAAAAACTCTACCACTAANCCTAAAAGA
AATGCTCCNAGAACAACCTTGTTAGAAACCCAAACCTCAGGATACTGCTC
AGTAGCCATAGCCGTTGTATAACCAAACACAACTAGTATTCCCCCAAATA
AATCAAAAATACCATTAAACCTAAAAATGAACCNCCAAAACTANAAACAA
TCCCACACCCNACACCACCACCCGCAATCAACCCTAAACCCCCATAAATA
GGNGAAGGCTTTGAAGAAACCCCCACAAAACTAATTACAAAAATAACGCT
TATAATAAAAACAATATATGTCATCATTATTCTCACATGGACTCCAACCA
CGACCAATGACATGAAAAATCATCGTTGTCATTCAACTACAAGAACACCA
ATGACCAACATCCGAAAAACACACCCACTAATAAAAATCATCAACNACGC
ATTTATCGACCTCCCNACCCCATCAAACATCTCNTCATGATGAAACTTTG
GCTCCCTACTAGGCNTCTGCCTAATCNTACAAATCCTAACAGGCCTATTC
CTAGCAATACACTACACGCCAGACACGNCAACTGCCTTCTCATCNGTCGC
ACACATCTGCCGAGACGTTAACTACGGCTGAATCATTCGATACNTACATG
CAAACGGAGCCTCCATATTCTTCATCTGCCTTTACGCCCACGTAGGACGT
GGCCTATACTATGGCTCCCACGCCTTCCAAGAAACATGAAACATTGGCGT
AATNCTACTACTCACAGTTATAGCCACCGCATTCGTAGGCTACGTCCTAC
CCTGAGGACAAATATCATTCTGAGGCGCAACCGTCATTACNAACCTCCTA
TCAGCAATCCCNTACATCGGNACCACTCTAGTCGAATGAATCTGAGGCGG
NTTTTCCGTAGACAAAGCAACACTAACACGCTTCTTCGCCTTCCACTTCA
TCCTCCCNTTCATCATCACAGCACTAGCAGCCGTCCACCTACTATTCCTC
CACGAAACAGGATCCAACAACCCCACAGGAATCCCATCCAACATAGACAA
AATCCCATTCCACCCCTACTACACAATCAAAGACATCCTAGGTGCCTTAC
TACTAATCCTAACCCTACTNGCACTAACCCTATTCACACCCGACCTGCTA
GGNGACCCCGACAACTACACCCCAGCAAACCCACTCAGCACCCCAGCACA
CATTAAACCAGAGTGATACTTCCTATTCGCATACGCAATCCTACGATCAA
TCCCCAACAAACTAGGAGGAGTNTTAGCACTACTACTCTCNATCCTCGTC
CTAATATTCATCCCAATACTCCACACATCTAAACAACGAAGCATAATATT
CCGACCCTTTAGCCAACTCTTATTCTGAGTACTAGTCGCAGATCTCCTAA
CCCTAACATGAATTGGAGGCCAACCCGTAGAACACCCATACATCATTGTA
GGTCAATTAGCATCCATCTTATACTTTCTCCTAATCCTAGTGCTAATACC
AGTAACTAGCCTTATCGAAAATAAACTCCTAAAATGAAGAGTCTTTGTAG
TATAACAAAATACCCCGGTCTTGTAAACCGGAAAAGGAGAACCCCACNCC
TCCCTAAGACTCAAGGAAGAGGCATTAAACCTCACCGCCAACACCCAAAG
CTGGAATTCTACATAAACTATTCCTTGAAAAAGGCTTATTGTAGAATNAC
CACAACNTTACAGTGCTACGTCAGTATTAAAAGTAATTTGTTTTAAAAAC
ATTTTACTGTACACATTACATACACATGTACGCNCACATGCTAATANTAG
CGTCTCCTTGTAAATATTCATATGTACATGCTATGTATTACTGTGCATTC
ATTTATTTTCCACACGATNAGTTAAAGCTCGTATTAAATTTTATTAATTT
TACATATTACATAAATTATTGATCGTACATAGTACATGTCCTNAAATAAA
TTCANGTCCGCTAACACTACGGCCGCTCCATTAGATCACGAGCTTAATCA
CCATGCCGCGTGAAACCAGCAACCCGCTCGGCAGGGATCCCTCTTCTCGC
ACCGGGCCCATANCTCGTGGGGGTAGCTAACGGTGATCTTTATAAGACAT
CTGGTTCTTACTTCAGGACCATTTTAACTTAAAATCGCCCACTCGTTCCC
CTTAAATAAGACATCTCGATGGATTAATGACTAATCAGCCCATGCTCACA
CATAACTGAGATTTCATACATTTGGTATTTTTTATTTTTTGGGGGGGGGC
CTGCACGGACTCAGCTATGACCTTAAAAGGTCTCGTCACAGTCAAGCAAA
TTGTAGCTGGACTTGTATGTATTTTTNATTTGACTAGCACAACCAACATG
TGCAATTAAATTAATGGTTACAGGACATAGTACTCCACTATTCCCCCCGG
GCTCAAAAAACTGTATCTCGTAGNGGATCAAACCCCCCTTACCCCNTACA
AAACTAACCGTCTGCTTAGATATTCACCACCCCCCTAGACAGCTTCGTCC
CTAGATCTACGAACCATTTTTTTCATAAATCAATACTAAATCTGACACAA
GCCCCATAATGAAATTATACGAACATCTTTTACACCCCACGGGTTAATGT
AGCTTAAATTTTTCATAAAGCAAGACACTGAAAATGTCTAGATGGGCTCG
CCAGCCCCATCAACACAAAGGTTTGGTCCCAGCCTTTCTATTAATTCTTA
ACAGACTTACACATGCAAGCATCCGCATCCCGGTGAGAACGCCCTCCAAA
TCACAAAGATCAAAAGGAGCGGGTATCAAGCACGCTACACTAGCAGCTCA
CAACACCTTGCTTAGCCACACCCCCACGGGACACAGCAGTGATAAAAATT
AAGCCATGAACGAAAGTTTGACTAAGTCATGTTAACTAGGGTTGGTAAAC
TTCGTGCCAGCCACCGCGGTCATACGATTGACCCAAATTAATAGAGACAC
GGCGTAAAGAGTGTCAAGGAATNACACAAAATAAAGTCAAATCCTAATTA
AGCTGTAAAAAGCCATAATTAAAACNAAGNTAAACCACGAAAGTGACTTT
AGTACAATCTGAGTACACGACAGCTAAGACCCAAACTGGGATTAGATACC
CCACTATGCTTAGCCGTAAACCTAAATAGTCACAAAACAAGACTATTCGC
CAGAGTACTACTGGCAACAGCCTAAAACTCAAAGGACTTGGCGGTGCTTC
ATATCCCTCTAGAGGAGCCTGTTCTGTAACCGATAAACCCCGATTAACCT
CACCAACCCTTGCTACTTCAGTCTATATACCGCCATCTTCAGCAAACCCT
AAAAGGGAGCGAAAGTAAGCATAACTACCGTACATAAAAACGTTAGGTCA
AGGTGTAACCTATGGGNTGGGAAGAAATGGGCTACATTTTCTATATTAAG
AACACCCCTTATACCCACACGAAAGTTTTTATGAAACCTAAAAACCAAAG
GAGGATTTAGTAGTAAATTAAGAGCAGAGTGCTTAATTGAATAAGGCCAT
GAAGCACGCACACACCGCCCGTCACCCTCCTCAAGTATCACAGCAAAGCC
CCAGCTCACTAACCCATGCTAAGCAACTGTACGAGAGGAGACAAGTCGTA
ACAAGGTAAGCATACCGGAAAGTGTGCTTGGATAAAACAAGATGTAGCTT
AAACAAAGCACCTAGTTTACACCTAGAAGATTCCACAACCCGTGTACATC
TTGAACTATACCTAGCCCATACCCCCCCCCACCGCTACTACTATAAACTA
ATCAAATAAAACATTCACCATACATCTAAAGTATAGGAGATAGAAATTTA
ATCACCAATGGCGCTATAGAGAAAGTACCGTAAGGGAAAGATGAAAGAAN
TATTAAAAGTAGAAAAAAGCAAAGCTTACCCCTTGTACCTTTTGCATAAT
GACTTAACTAGTAATAACTTAGCAAAGAGACCTTAAGTTAAATTACCCGA
AACCAGACGAGCTACTTATGAGCAGTAACCAGAACAAACTCATCTATGTG
GCAAAATAGTGAGAAGACTTGTAAGTAGAGGTGAAAAGCCTAACGAGCCT
GGTGATAGCTGGT
>rnd-6_family-1167#LTR/ERVL-MaLR ( Recon Family Size = 41, Final Multiple Alignment Size = 37 )
ATTCACTCCCTTCTCTTCCNCTGCGTGAAGGTATATTTCTCTACCTCANT
AACATTGGGCTTGGCCATGACAACTTGCTTGGCCAATGGNATGTTAGTGG
ACGTGACACGAGCAAAGGCTTGANATGTTTTGTACGTCTGCCGTCGCCAT
GAGAAGAACATGCCCCGGCTAGCCCGCTGGTCCAAGGAGGATGAGAGACA
CGTGGAGCAGACCTGGACCCAACCTGCAGCTTGAAGCCAAACTCAGCCTA
GATCAGCCGACAACCGACCCACAGATGNATAANTGATTACGTTTTAAGCC
ACTANGTTTTGGGGTAGTTTGTTACACAGCATTATTGTGGCGATAGCTGA
CTGATAC
>rnd-6_family-162#SINE/MIR ( Recon Family Size = 40, Final Multiple Alignment Size = 37 )
AATTCCAGTCTGCCACTTACTNGCTGTGTGNCCTTGGGCAAGTTGCTTAA
CCTCTCTGAGCTCCAATTTCCTCATGTGGCTGCAGGACTGAGGTGAAGGA
TTCAGTGATCATGGGGAGAAGGTGAATNAAGGAAAGTCACCATNTACTCC
TTGACCCCCANAAGTGCTCGCCGTGACTTTGGCTCAGTGNNTGGNGGGCA
GAAGTTGGNCCCCGNGGCTGGGGATCACCCAAGNGT
>rnd-6_family-1463#Unknown ( Recon Family Size = 49, Final Multiple Alignment Size = 37 )
ACGAGGCCTTGATGCGCTTTCCTGTGGTACGTAAGCTTTGGTCGCGTCCC
CTGGTGGGCACATCGGCTCAGGACTGCCCTGTCCCACAGGCTCCAGGTGT
GGAGCCCGACTGTTGGAGATCAGCCTCACGTGGCTCTTTCACGGACGAGA
CCGGCTCGCAATGGGACCGTTCACGAGCTGGGGACCGTGCTGGCTGTTAG
GAGTCGGCACACCAAGAGCCCTCCGAGGGAGAGGAGCTGCTGACGTTTGC
CAGCACAGTCTCCAATTCCGAACTGCCACCATTCCCTGTAAGAGGCTCCC
GAAAGCTTCGACGCAGTTTCTCAGTTAGCTATAAATGGAGGCCAGTCACT
TGGCAGACTCCCCCAACGCCCGGCCTCCCAGGCTGCGATACAGACACGCC
GACTGCTTCAGCCA
>rnd-6_family-43#LINE/L2 ( Recon Family Size = 47, Final Multiple Alignment Size = 37 )
TTGAAAATAGGTCCAAGCTCTTTCCTGCCTCAGGGCTTTGCGCNTGCTGT
TCCCTCTGCCTGGAATGCTCTTCCCCCAGATGTNNGCATGGCTCGCTCCC
TCACTTCNTTCAGGTCTCTGCTCAAATGTCACCTCCTCAGAGAGGCCTTC
CCTGACCACCCTATCTAAAGTAGCCCCTCCCGCCACCACTCTCTATTCTT
CTTTATTTTTCTTANCGGCACNTACTNCCACCT
>rnd-6_family-1661#LINE/L2 ( Recon Family Size = 47, Final Multiple Alignment Size = 36 )
AATAATTGTCTTTTTGGGGAGATGTAGAGGGTCTCTTCTTCCATCTCTCC
NACCTCTNAGCNTCTAAATGTTGGAGTGCCCCAGGGCTCAGTCCTTGGAC
CTCTTCTCTTCTCTATCTNCACTCACTCCCTAGTGATCTCATCCAGTCTC
ATGGCTTTAAATNTCATCTATA
>rnd-6_family-660#SINE/MIR ( Recon Family Size = 45, Final Multiple Alignment Size = 36 )
GGGNAGACAGTATATTATAATAATGAATGACACAAGCTTTAGAATTTCAN
ACCAGTGTTTGCAAACTTTAGCTCTNTGTGACCTTGAATAAGTNATTTAA
CCTCTCTGGACTCAATTCTCTTCCCTGTAAAATGAGGATAATAATGACCT
CCGTCTCAATAGTGTTGTGAGAATTAAATGAGATAATGTATGTAAAGCAC
TTGGCAACAGTAAGCCTTC
>rnd-6_family-2266#DNA/hAT-Tip100 ( Recon Family Size = 42, Final Multiple Alignment Size = 36 )
GAGGTCGAGAGGCCCGGGCCACTTCCATTTTTTGAGGCTCCCGGTATATT
AAAAAATGAAGAAATGCCAAAACAGGGTTACAAAAATTGTGGTACATTTT
AAATGTTTACATTTAACAAATTAATGCTTTTAGCACACGCACAAATTACA
AGCAATATAATTGTGCTATTCACAAGATAATTATAGGATTTATTAAAAAT
ATTAATTCATAGTGCACTACAGGCGGTGNGGTCCGGTAATGGGACACAAG
TTTAAAGTTTT
>rnd-6_family-1622#DNA/hAT-Tip100 ( Recon Family Size = 39, Final Multiple Alignment Size = 36 )
CAGTACCTCTAAGAGCTGAGTAAGAAAGGACCCTGACCCAGGCTCCGGCC
TCAGGGAGNCTNCATGCTTTGGAGTGCCTTCCTCGAAATTTTCTAAGTCC
CCCTCCGGTGCCTGGGGCTGAGGAAGGCACCCTGAGCCCGGATCTGGTCC
CCACGTGGACCCGGTCGCCGGAATGCCTTCCTCGAAATTTTTCAAGTCCC
ACTCTGGTGCTGGGACACGTGCCATTTCTCCCCTTCGGGGCGCTCTCTGA
CCCTCTAACCCGCCCGCCTACTCCTCACGTTGACCAGATGCCCTAGGAGC
TCTNAGACTCGCGCCTATGGAGTTTCCCAGGGCCTGGAGAGCGGATCGCT
CCCACTGGCCGGCGCGGTATTTCTTTCGCGGGATCGCACGAGATTGGGCC
GCCAGAATGGTGCTGGTTTCGGGTGACTCTCACGTCGGACACAGGACGAG
TTCAGGGCTCTGGGCTACCGAAGGTCCACCGCCGACCCTTGGGCTTGAGC
CGCATGTGTGGGCCCGTGCACTGGCTCTCACCCGTCTGTGTTCCGACCAT
GGNGCTGCCTCCGGTCTACAGANCACCAAGGCGTGAGGGTGGCGGCATTG
TCCTTACTCTGTCCACCTCCCGCCGCTGGCACCAGGGCGGTCACCCCACC
CTCTCCGCAGGCTCCGCGCCGTGCNTCAGGGCAGGCCCGTCTCCTCCGAG
GNCTTTCGAGACCGTTGCTCCGCAATGCCAACGGGCCCTTCCGATCGATG
TCCTCTCGTCTCCGATCGACGGCGACTCGTGCTCTCCAGGTCGGTCTTAA
GCCGTGCCGGATGAGGGACGGACATTCCTTGTGCGAATGGGACCGCTCTT
CTCGCTCCACCCACGGGCCCCTCGCCTATNCTTCCTGGGTGTGGCTAAGA
GATCACATTCTAGGAATGCAGTGATTACGGCCTAAAGAGTTCAAGAGAAG
ACATGGTTGGAAGATGTGCTCTACGTTTACGCTATAAAATTCCGAACGGT
AAATTTAACATGACCAGAAAACGAATTATCGTTCACATTTTCCTGCATAC
TCTGGGTAAGACTTGCATTTGTGGTCATCATCAACGAAGCACAGTAACAA
CCTTTGAGAGAGTCATTGGAAGCCAGTATTCACGGCGGCACGATGGATGC
AGCATGAGTAATGATGTAACCAGCATTAAATAAATGGTATTAGGGAACTG
CAGAGGCAAGATCTATATNGTTCAATACAATAGTAACAGCGTTGCTACCT
TTTCTCGCGGTGGGAGATATGAAATTAGCCAGGAACGGCGCATTTGACAA
TAAAGAACACGAAGAGATGGTTCCTGGACCTGAGGAAGAGATGGTGCCTG
GACACTANGAAGAATCTTCACGTGCACTGATTGGACAATAAACAAATACG
TAAGTACCTCTTCTCTACCCATTATTCTAAATCTTCATCGATAAACACTA
TACCTCACATGGGCCCATGAATTTTGTAATACATTTTTAATCAAATTGTT
TATATAGGGCCCAGCAAA
>rnd-6_family-853#DNA/TcMar-Tigger ( Recon Family Size = 41, Final Multiple Alignment Size = 36 )
CATTATAGGCCCTTGGCATTCGTAGATTTAACATTCGCAGTTTCAACTAC
TCTCAGTGACCCCAAGGTCCATGGCATGTAGTAATTCGTAATTTTGCTGA
GACTCAAGTGTTGATCGCTTACTGTCAAGCTTGCGAATGGGAANTGATGT
GAAGCCCAATGAGGGAGCCTACTAGACCGCCCAGCANCCGCATCTCAACG
CAGCTTTGTTGTTCTCTGCTCGTCGTCGCGTACGCAGTAACTCTTGAAGT
GATAAAAACTGTTTCTTTGCGAAAAATGGTCCCGAAAAGAAAGCCAACTG
CTAGTGCTGGTGATGGAAGTGAAGAGAAAATGAAGAGGTCTAAGAAAGTG
ATGGTTCTTAGCCAGAAAATAGAAGTTTTGNATAAATTAA
>rnd-6_family-48#Unknown ( Recon Family Size = 52, Final Multiple Alignment Size = 35 )
ACAACAGCTGCGAAGTGGATGCACAGAACAGTCACCTCGATACCAGCCCN
GTGTCCCNAGCAGCGATCCCTCCCCGGAGGGTACTTAACCCACCCCGGGA
TTCNAGCAGGGAGTTTCGCCTTGTAGCAGTACGNCTCGCNCAGGAGACNG
GGATGAGGTGTAGGGCTNATCTGCGTGCGCTCACGCTNCGTGTCCCCGAG
AAGGTTTCACGGAGCAGAATGCATCACCGACCGCTACCACGTGTGTGCAC
CAAAGAAGCCCTGTGCCGTGGGTGTTCTCAGGCCGAAGACCTGAAGACCT
AGGTGTGTGCTGCACCCGCGCTCGGTGGTTCACACGTTGCGTGACCCT
>rnd-6_family-1522#DNA/hAT-Blackjack ( Recon Family Size = 46, Final Multiple Alignment Size = 35 )
TTCAAAAAAATCATTTANTTCAAAGTATTCAACAAACGGAGCGCCAAAAC
TTCGGCTTTTGAAGCTTTTAGTAAATTGTAATTATTGAAAACGAAGCTTG
CAAACAGGAAGACATTGAAATTTATCCCTACAAAAGCAAGGGAGAAACTG
AACAAATTAAATGATGAGAGCTCAAACGGTGTACAAAATTTAATTTTGAA
ATTCTATAATTGCGCTTTGGATATCTCGACTTGTGGGAAGAATCTTTTGA
TGGAGCTCCTATTTTTAATTGGATAAATTTATATTCTGTACCGGAATGGA
ATGAAATTGAGAAGGCCTATGATTTTGCAGCATCTAAATTTGGCAAAACA
TTCAAAAGAATCATAGAGACAACTTATTTGATAAGTTTTGTTTTGTAAAA
ATATTTGTCGAAGAAAGGTGCTCTGAATGGAGGCAAAAAGACAGTACCTG
TGAAAATATTTGGGCTGAAATATTTACACATTTCAATANAAAAAATTAGA
ATTGAGAATATCCTCCATTTAGCAGAATTTGCTCTGAGCTTACCAGGTAC
CTCAGCACCTATAGAGATTGTTCTCAATTAAAAATATTATGGTCTACAGA
GAAGAGTCAATTGAAGTGTCAACAATTTCCAATAAAATGCAACTTTGAAG
AAGATTGCAGGCAATTTTATGAAAAATTAAAATAATAAGACCATATTGAA
AAATACATTTTCAGAAAAATACCAGTGACNTGATATTAGAGACAGATATG
GCTAAGAAACTGATTAAAGTACGTGAATATGTACCAAGAATAATTATTCT
GCTTATNTTATTTTTAATGTTCAGATAATTNATAAAAATTTTAAAAATTA
TGTATACATACTGTATATTATTTTTTAGAAANAATTTTATTTTNAAAATA
GTTTTTAATAGACTATTTTATAAGCCCATCAATTATTATACNTT
>rnd-6_family-10099#LTR/ERVL ( Recon Family Size = 38, Final Multiple Alignment Size = 35 )
ATACTTGCCCCCGGCCCCAGCTAGTGATTGTTCTAATCTTTAGATCAGAA
CATCTCCACCATGATAGCTTATCAAAGGGGCGGT
>rnd-6_family-4329#LINE/L1 ( Recon Family Size = 46, Final Multiple Alignment Size = 35 )
ACNTTAAANATGGATGGATTAAACGCTCCAGTAAAAGANACAGGCTTGCC
GACTGNATAAAAAAGAAGACCCAGNTATATGCCGTTTACAAGAGACCCGC
TTTAAACATGGGGACACATGCAGACTGAAAGCGGATGGAAAAAGACTCCA
TGCAAATGGATCNAAAGAAAGCTGGAGTGGCATATTNATATCGGATAAAA
TAGACTTTAAAATAAAGAATGTTACNAGAGGCAAGGAAGGAAATTGCATA
ATGATAAAAGGGTCAATNCAAGAAGAGATATAACAATCNTAAATATATAT
GCACTAATATANAGCAGCTCAGTAAATAAAGCAAATGACAANTATAAAAG
AGGAAATGACAGAACACAATTATAGTTGGGAATTTTAANACCTCACTTAC
CCGCGATACATTCAGACAAAAATTAGTAACGAACANAAGAAGTGAACAAN
GNTACCAGACAGACTTAATTGATATTTATAGGACACTCCACCCAANAACA
GCAGATTGCACTTTCTCCTCAAGTGCACACGGAACATTCTCCNAGATAGA
TCACCTCTTGGGCCACAAANCAAGCCTCAGTAAATTTAAGAAGACCGAAA
TCATATCGAGCATCTTCTCCGACCACAGTGGTATTAAACTAGAAATCAGT
AAACAAAAAGATNTAAGNAAAATCCCCAAATATTTAGAAGTTAAACAACG
CGTTACTAAATAACCCATAGGTCAAAGAAGAAATCAAAAAGGAAATCAGA
AAATACTTNAAACTNAATGAAAACGAAAATACGACGAACCAAAACTTGCG
GGATGNAGCNAAAGCAGTTCTTAGAGGGAATTTAGGATACAGGCCTNCNT
TAAGAAAAAGAAATCTCAAATAGACGATCTAACTTTGCACCTAAGGAACT
AAGAAAGAAGAACAGACAAAACCAAAATTAGTAGAATGAAAGAAATACGA
ACATCAGAGCGGAAATAAATGAAATAGAAATAAGAAAACAATAGAAAGAT
CAATAAAACTAAAGCTGGTTCTTTGAAAANATAAACAAAATTGACAAACC
TTTAGCCAGACTNANTAAGAAAAAGATGGAGAGGATACAAATNAATAAAA
NTAGAANTGAAAAAGGAGTTACAATGGACACCGCAGAAATGTGAAGCATC
CTAAGAGACTACTACAAGCAGCTCTATGCCAATAAAATAGACAACCTGGA
AGAAAGGGACAAATTCTTAGAAAGGTATACCCTTCCAAGACTGAACCAGG
AAAAACTAGAATATATGAACAGACGAATCACAAGTAATGAAATTGAAACT
GTGATTAAAAATTTTCCAACAAACAAAAGTCCAGGACCAGATAGCTTCAC
AGGTGAATTCTGTCAAACATTTAGAGAAGAGCTAACACCCCTCCTTCTCA
AACTCTTCCAAAATATTGCAGAGGAAGGAACACTCCCAAACTCATTCTGT
GAGGCCATCATCACCCTGATACCAAAACCAAAGATACTAGAAAAAAGAAA
AATACATACCAATATCTCTGATGGATACAGATGCAAAAATCCTCAACAAA
ATACTAACAAACAGAAACCAACAACACATTAAAAGGTTCATACACCATGA
TCAAGTGGAATTATTTGCAAGGATGAAAGGATTCTTCAATATATGCAAAT
CAATCAATGTGACACACCATATTAACAAATTGAAGAATAAAAACCATATG
ATCATCTCAATAGATGCAGAAAAATCTTTTGACAAAATTCAACACCAATT
TATGATAAAAACTCTCCAGAAAGTGAGCATAGAGGGAACCTACCTCAACA
TAATAAAGGCCATATATGACATGGGTTCACAGCAAATACCATTCTCAATN
NNNNNNNNNGGTGAAAAACTGAAAGCATTTCCTCTAAGATCAGGAACAAG
AGAAGGATGTCCACTCTCGCCACTNCTATTCAACANAGTTACTGGAAGTC
CCAGCCACGGCAATCAGGNAAGAAAAAGAAATAAAAGGNATCAAATCGGA
AAGGAAGAAGTAAATTNTCTCTGTTTGCAGATGACATGATACTATACGTA
GAAAACCCNAAAGATTCAGCCGAAAAACTGCTGGAGCTAATNAATGAATT
CGGNGAAGTTNCAGGACACAAAGTCAACATNCANAGAAGTCTCTTGCATT
CCTATACACTAACGATGAANNATCTGAAAGAGAAATNAAGGAAACANTCC
CATTTACCAATNGCANCAAAAANAATAAAATACCTAGGAATAAGCCTAAC
CAAGNGAGGCGAAAGACCTCTACNCNGAAAANTGTAAGACACTNATGAGA
GAAATCGAGAGANGACACAAACAGAGGGAGAGATATACCATGTTCTTGGA
TTGGAAGAATCAATATTGTGAAAATGACTATACTACCNAAANCAACCTAC
AGACTCAATGCAANCCCTATCAAATTACCAGTGGCATTTTTTACAGAATT
AGAACATAAAATCTTACAATTTGTATGGAAACGCAAAAGACCCCGAATAG
CCAAAGCAGTCTTGAGNAAGAAAAACGGAGCCGGAGGAATAACGCTCCCC
GACTTCAGACTATACTACAAAGCTATAGTAATCAAGACAATATGGTACTG
GCGCAAAAACAGAAATATAGATCAATGGAACAGGATAGAGAGCCCAGAGA
TAAACCCACGCACTATGGTCAANTAATCTATGACAAAGGAGNCAAGAATA
TACAATGGAGAAAAGACAGTCTCTTCAATAAGTGGTGCTGGGAAAACTGG
ATAACTACATGTAAAAGAANGAAATTAGAACACTGTCCTAACACCATACA
CAAAAATNAACTCAAAATGGATTAAAGACTTAAATGTAAGACCGGACACT
ATAAAANTCTTAGAGGAAAACGTAGGAAGAACGCTCTTTGACATNGATCN
CGGCAAGATCTTTTTTGATCCACCTCCTAGAGTAATGGNAATAAAAACAA
AAATAAACAAATAGGACCTGATGAAACTNAAAAGCTTCTGCACAGCAAAG
GAAACTATAAACAAGACGAAAAGGCAACCCNCAGAATGGGAGAAAATATT
TGCAAACTGAATANACAGACAAAGGGTTAATNTCCAAAATATATAAANAG
CTCATACAGCTCAATANCAAAAAAACAAACAACCCGATCAAAAAATGGGC
AGAAGACCTGAATAGACATCTCTCCAAAGAAGACATACAGATGGCCAANA
GGCACATGAAAAGNTGCTCAACATCACTAATTATTAGAGAAATGCAAATC
AAAACTACAATGAGGTATCACCTCACACCCGTTAGAATGGGCATCATCAG
AAAATCTACAAACAACAAATGCTGGAGAGGGTGTGGAGAAAAGGGAACCC
TCTTGCACTGTTGGTGGGAATGTAAATCGATACAGCCACTATGGAGAACA
GTATGGAGGTTCCTTAAAAAACTAAAAATAGAATTACCGTATGATCCAGC
AATCCCACTACTGGGTATATACCCAGAGAAAACCATAATTCAAAGAGACA
CATGCACCCCAANGTTCATTGCAGCATTATTTACAACGANCAGNTTATGG
AAGACAACTTAAATGCCCATCAACAGACGAACGGATAAANAAAATGTGGT
ACATATACACGATGGAATATTANTCAGCCATAAAAAGGAACGAAATTNNG
TCATTTGCAGAAACGTGGATGGACCTGGAGNCCGTCATGCNGAGTGAAGT
AAGTCAGANAGAGAAAGACAAATACCGTATANTANCGCNTNTATGTGGAA
CCTAAAAAAATGGTACAGACGAACTGGTTTGCAAGGCAGAAACAGAGACA
CAGATGTAGAGAACAAACGTATTTACACCAGGTGGGGAAAGGCAGGGGTA
GTGGGGTGGGGACGAAATGGGAGATGGGATTGACGTATATACACTAATAT
GTATAAAATAGATAACTAGNAAGAACCTGCTGTANAAAATAATAAAATAA
AATTCAAAAAAAATAAAAGATAAAAATTATATGATCATCTCAATAGATGC
AGAAAAAGCATTTGACAAACTTCAAAATCTATTTATGATAAAAACTCTCA
ACATAGTACATATAAAGGGAACATACCTCAACATAATTAAGGCCATCTAT
GACAAGCCCANTNAATGATGAAAGGCTGAATGCATTTGCCTAAGATCGGG
AACAAGACAAGGATGCCCACTCTCACCAATTNTATTCAAATAGTNCTGAA
AGTCCTAGCCAATGCAATTAGACAAGAAAGACAAAAGTAAATAGAAAGGA
AGAAGTAAAACGTTTTTNTTTGCAGATAATATGATATTATATCTCGAAAA
ACCAAAGANTCAACANAAACTGTTAGAACTAGTAAGNAAGTTCAGNAAGG
AAATTGCAGGATACAAAGTGCAACACACAAAAAACCAATAGCNCTTCTAT
ATGTTTACAATGAACTACCAGAAAGAAAAATTAAGAAAACAATTCCATTT
ACAACNGCANCGGAAGGANTAAAATGCCTAGNAATAAATNTGACCAAGGA
ATGTGAAAGATCTGTACACTGAAGACAGTAAGACGTTGATGAAAGAAATT
GAAGAAGACACAGAAAAATGGAAATATAATCAGTGCTCATGGATTGGAAT
GAGTAATATTGTTATAATATCCATACTACCCAAAGTAACCTACAGATTCA
GTGCNATCCCTATCAAAATTCCAGTGGNATTTTTCGCGAAAATAGAAGAA
ACAATCCGAATAGTTGTATAAAAACCACAAAAGACCCTCAAATAGGCAAC
ACAATCTTGAGAAAGAAGAATAAAGCAGGAGGCATCATACTCCCTGGTTT
CAAACGNTATTACAAAAGCTACAGTAATNAAAACAGTTTGGTACCGCCAA
NAANAGACGCAGATGAATGAAACGGATNAGAGAGTCCAGAAATAGACTAA
ATATAAATGGTCAAAATTTTTGACAAAGGAGTCAAGAACGTACAATGGGG
AAAGGACGNNTCTTCAATAAATGGTGCTGGGAANACTGGACAGCGANNCG
NNGAAGAAAATTCAGCTGGATCCCTANNCNANACCNCNNACNAAAATNNA
NTCNGNATGNATCAAAGGCTTGANNATAANANNTGAAGCCGTAAAGNTAC
GAGAAGAAAACATAGGCGGTAAGCTCCTTNGCATCGNTCTTGGCAATTAT
TTTTTTGCATTTGACACCAAAGGCACAAAGGCCGTGAGAGCAAAAAAGTC
AGCAAGTGGGACTATATCAAACCGAAAAGCTTATGCACAGCAAAGAAAAC
TGTCAACAAAATGGAAAGGGAACCTATAGTATGGGAGAAAATACTTACAA
ATCCTATATCTGATAAGGTGTTAATATCTAAAATATATAAAGAACTCAAA
CAACTCACTAACCAAAAAAAACCCCTAAACAATCTAATTTTAAAAATGGG
CAGGGCTTCCCTGGTGGTCCAGTGGTTGAGAATCTGCCTGCCAATGCAGG
GCACACAGGTTCGAGCCCTGGTCTGGGAAGATCCCACATGCCGCGGAGGA
ACTAGGCCTGTGAGCCACAACTACTGAACCTGTGCATCTGGAGCCTGTGC
TCCACAACAAGAGAGGCTGCAATAGTGAGAGACCTGCGCACCGCAATGAA
GAGTGGCCCCCGCCTGCAGCAACTAGAGAAAGCCCTCGCACAGGAACGAA
GACCCAACACAGCCATTAATTAATTAATTTTTTTAAAAAATGGGGGCTTC
CCTGGTGGCGCAGTGGTTGAGAGTCCGCCGGCCGATGCAGGGGACACGGG
TTCGTGCCCCGGTCCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAAAAAAAAAAANAGAAAATGGGCAAAGGATA
AATAGACATTTTACAAAGAAGACGTACAGATGACCGACAGATACACGGAA
AGATGCTCACATCACTAATNATCAGGGAAATGCAAATTAAAACCACANTG
AGATACCACCTTGGGCACATCAAGCTAGAGTGGCTATTNTCAAATTTTAA
NACNAGAAATAANNAGTACTGGACGAGGATGTGGCGAGANGGGTAATCAC
ATCCTTNTNCACTGNTGGTGGGAGTGTAAATTGGTGTAGCCATTATGGAA
AACTTTATGGAGGTTCCTCAAAAAATTAAAAATACAATCCAGCAATTCTG
CTTCTGAGTATGTATCTGAAAGAAATGAAATCACTATCTTGAAAATATAT
TTGTTCCTCCCCCCCCATGTTTGTGGCAGCATTATTTATAATAGCCAAGA
CACGGAGATAACAAGAGCGTCCATCGATGTGTGAATGTATGATAAAGACA
GTATNATGCATTAANAATGAAATATCCTCAGCCATAAAAAAGAANGAAAT
TCTGCCATTTGCGGCAACATGGATGGAACTTAAAAAGAAACAAACTCACA
GATACAGAGANAGANTGGTGGTTNCCAGGGGTGGGGGGTGGGGGATGGGC
AAAATGGGTGAAGCGGGTCAAAAGGTACAAACTTTTCANTTATAAGATNA
ATAAGTTCTGGNGATATAATGTACAACATGGTGACTATAGTTAACGANAC
TGTATTNTATANTTGAAATTTGCTAAGAGAGTAGNTCTTAAAAGTTCTCA
TCANAAAAAAAACTGTAANTGTGAGGTGATGGAGTGTTAANTAACTTATT
GNAGTNATCATTTCGCAATATATATATATATCAGATCGCCGCGNTGTATG
CTCTAAAATTGTAAAATATTACAATNNCATNTGNCAATTATACCTCAGTA
AAGCTGGATTCAAAAAATGTA
>rnd-6_family-463#Unknown ( Recon Family Size = 38, Final Multiple Alignment Size = 34 )
CGAGCAGGTTGAGCCACAGNCTGGGCATCCCAGTCCTGGGGTCCTGCACG
GAGGAGACAAGCCCCCTTGNCTGCTGGGAGANCCGCTGGGACAGATAGAA
GGGCTGGAGAAGCCTAGACTCTACTCGCGAGGAGTGCGCGCGTGCTGGCT
TGCCAACAGTCAGGGCGGAGAGAGCCCTGCACTGGCGGCTGCCGCCTCGC
CGCACTTCCCAATCCGAACCGGGCGAACACCCCGGCCCCGCTCACTCCAC
GCCACAGCNTGGCCAGCCGGGCCCTGGGAGAAGACTCGGTCTAGCTGCGC
AGAGACAGNCCGGGGGGCCTGGGGTGTGGTCCGGGCGGAGCCACGGAGNC
CATTGTCAGCGCGCGCACGGGGCAGCGGGCGGGNCTGGCCGCAGACACTG
TCAGCGCGCGCACCGGGCGGCGCCACAGGAACGCGCAGCGGCTAAGCGCT
GAATCTCGGGCGGACAGGCCCTGGGAGAGGACTCGATCTAGCTACGCAGA
CAGCCCGGAGGGCCTGGGGTGTGGTCCGGGCGGGGCGGCGGCGGCCATTG
TCAGCGCGCGCAGGAGTACGCAGCGGTTCGTCTCCCAGCGAGAGCGCTCC
GGCCCTCCGCCCACTCCACGCCGCAGCTTGGCGCTGGATCTGGGGCAGAC
AGGTCCTGGGAGAAGNCTGCCACAGAGGCAGCCCAGATCTCAGGCGGCAG
CACAGCCACCTCGATTCCTGCAGCCACAACGCCCCGACCCCCAGCCCACT
CCACGCCACAGCCTNGCACTAGATCTGGGACGAACACAACAGAGAAAGGG
ACGCGACCTTGGGCTGCTTCTGAGCGGAGCCGCGGACGCCTACACAGGCG
GCGCATAGGTTCTCTGTGACCGCACGGGCCTCACTTGCTTCAGCAGTCAC
AA
>rnd-6_family-7678#LTR/ERVL ( Recon Family Size = 35, Final Multiple Alignment Size = 34 )
AAAGGCAGTCTCGTGTACGCAGTCTTTCGACCCCCGCTCGGCCGCATAAG
AATGGGCCTTGGGCCTGGAACACTTCCTTACCAAGAGATAAAGAGCCCNC
ACAGCCTGTGCCGGGCTTATCACCTCGTGTGGGAATATCTTTCCCTGTTT
CGGGCTCAGTGTGTACTCTTTGTTCTGCTTTAAGCGTGTGCGTCATATGG
CACCTGGCCAACCCCACCGCTATATCTGTCCTCGCGGGGAGGGGACGGGG
TCCTTCGCCTGCAGCACGAGAGGGGTGCGTGCAGGCCAATCGCCCTGCGT
CGGCTGCCGGGAGGGACCCGCTGGCCATGGGGGACCGACGCCCACTACTG
AAGCTGATCTTGCTCTGTCTCTTCTCTATGTGAGTAAAGCGTTGTTCCAT
CCAGTGCCTGACTGTGTTGTGTCTTCCTTGGCGACTCCGATACCAAGATG
CAGTGGGCAGAAGTGTTTGGACTCCTGCTCCTGGTGTTGGCAACCGGTGC
ACGGTACTCTGCT
>rnd-6_family-5066#LINE/L1 ( Recon Family Size = 41, Final Multiple Alignment Size = 34 )
TCTACCACGAGGACACTGGTGCTGGCAAGCGCCATTTTGGAATCCTCCCT
CTAGCCTATTAGCGCCAGGGGCCTACCCGCCCACCAGCGGGCCGGCACCA
GCCCCGCGACCCACCAGGCCNCGCAGCCAGCCACGCTGTGAGGACCTAGC
CCCGCCCACCAGCGGGTGGCACCAGGACGCGGCCCCACCCACCAGCGGGC
CGGCAGCAGCCCTGCAGGCCCCCAGGACCTGCAGCCACGAGCCAGCCGCG
CTGGGACCNAGCCCCGCCCACCAGCGGGCCGGCANCAGCCCCAGAGCCCC
CAGGCCGCGCAGCCAGCCACGCCGGGAGCCTGCCCCACCCACCAGCAGCC
CGCAGCCACCGCACAAGGCAGGGCCTCGCAGCCAACCGGGCCGGGGNCCA
GCCCCGCCTACCAGCGCGCCCACAGTAGTCAGCATCACCAC
>rnd-6_family-1035#LTR/ERV1 ( Recon Family Size = 44, Final Multiple Alignment Size = 34 )
TTAAAGAAACCTCAGCTAAAATTGGAGTCGGGACAGGCCTGTAGGGGGAG
CTCTCACGCCCCGCCATGCATCGTCCAATTACTCCAAACAGGAAGAGACG
TACACCTGCACATCTCCGACAGGAAGGTGTTGCCTACTTTACTACCCAGC
AGGAGGAAGAAAACTTCTCTCCGCCCGGCGACAGCCCAGCCAATCAGAGA
CTGTAGCAGCCCAGCCAATGAGAAGCCNCCATACTCTGGACTCCCAGCTT
CCTC
>rnd-6_family-2580#LTR/ERVL-MaLR ( Recon Family Size = 40, Final Multiple Alignment Size = 33 )
AGCAGGANCGGNCACTNGACCCAAAGCTGGGCCAATCAGATTCTCTCTCC
CAGGAATTTGGAATTGGGAATAGAGACCGACCCAATCGTCTCTGCATGCG
GCTGGAACGCAAGACGTAAAACTGAGAGCTGGGAGGCCACAGTTTCCGCC
ATGTANACTGAGAAGCAGAGAAAGCCAGTCTGCAGAGAGAGAGAAGAANG
NAGATGTGCAAGAGAAGCAGAGATGAGAAACAGAGAGAAAGCATTTCTGG
GTTTCTGGTGGCTTTCTAGTTCCTGGTTCCAGTCCCTTCTGAGGCCCGGC
TGCATTCCTGCCCTTGGGTTCCGCGAGACACCCCTGTATCCTTATAATGA
ATTCCTCTCTTTGTNTAAGCTAGCTCGAGTTGATTTCTGTTACTTACAAG
TCTTA
>rnd-6_family-383#LINE/L2 ( Recon Family Size = 51, Final Multiple Alignment Size = 33 )
TGAACTGTCTGTGCTCCTATCTAAGGCCAACTCTTCCACTTGTGCNCTGG
ATCCCATCCTCTCTCCTACTCAAGGACGTCGCTCCGCAACTTCATCTCTC
TCCTGCGTACCCATTTTCCCCTCTCTACCGGATCATTCCCATCAGCATAC
AAACATGCTGTAATATCTCCCATCTTAAAACAAAAAAAAACAAANAAACC
TTGATAGAGCCACCCTCTTTAGCTACCGGCCCATTTCTCTGCTTCCCTTT
ACAGCAAAACTCCTTGAAAGTTTATNTCCACTA
>rnd-6_family-2866#LINE/L2 ( Recon Family Size = 34, Final Multiple Alignment Size = 33 )
CTGCTCTCATGGGGGAAGGCCTTGTCTTCCTNTCAGGGGGCGGGGCTGCT
TCTNCCATCGGACTGGGAGCTCCCTGAGGGCAGGGACTGTGTCTCCCCCA
TCAGGCNGGGAGCTCCCCGAGGGCAGGGNCTGTNTCCCCCNTCAGACTGG
NGGCTCCCAGAACANGGGCTTGTCTCCCTTCAGACAGGGGGCTCTCCGTG
TTCCCTTCCGGCGGAGCTTCCGAGGGACAGGGGCCGCGTCTCCCTCATCA
GACTAGGTACTCCTGAGGGCAAGGGTCGCATCTTCCCCCTCAGACTGGGG
NTCCCGAGAGCAGGGTGTGTGCCCCTCCCATCAGGNTGGAGCACGTCTCC
CTCTCAGACTGGGGGTCCCTGAGGGCAGGGGCTGTGTCTCCCCCTCAGAC
TGGGGCTCCCTGAGGGCAGGGACCGTGTCTCCCCCATCAGACTGGGAGCT
CCCTGAGGCAGGGGCTGTGCCTCCCCCATCAGACTGGGAGCTCCCTGAGG
GCAGGGGCCCTGTCTCCCCCATCAGACTGGAGGCTCCCTGAGGGCAGGGN
CTGTGCCTCCCCCTCAGACAGGGCGTTCCCTGAGGCTAGGCCCCTACTCC
CCCANCTGACA
>rnd-6_family-4554#LTR/ERVL ( Recon Family Size = 34, Final Multiple Alignment Size = 33 )
GTGCCCACCAGGGGNCTTCTTAGGTTCAACTAAACATTCAGACTCACAAG
ACTACCATAGGCCACACTTGGCACCAGTCTACTCAGAAGGATACAGGACA
GGAANCACAGCTTGCCAGCAGGGCAGCATCAGGCGTTCCTCTTCCTGTGG
GAGCTCTGCGAGTCCACGCAGCAGNCCACGGAGCTGTCTTCTTTGGCCCC
CAGGTGACAGCTCAGGTGCGAGGAGACGAGACCATCATTGGGCAGGTGCA
GGAGCCGCCCTGGCTTACATGCTCCTGGAGCCAGTATCTCTTGTAACAAC
TCCATAGGCATAGCTTCCAGGGTCCCCGCAAGGGACGTGCCCAGTTACAA
GAGTCACCACACTCAGGAAGCCCAAAGCTATGGCTTCCCATCAGGTATTT
ATAGTTCATTTACAGTTCCTCCCAGTCCAGATGCAGTTTACCAATCAGGG
GTCATTTTTACCATAAGCAATGTTGCCTAGTAACATAGTTGACATTCTAC
CTTATCAGGTTTCCGGGGAACAGAGCTAGAGAGTTAACCNAAGGTCAGAT
TCTCATGCAGAAGGGGAAAGGAGTGAACCTTTT
>rnd-6_family-657#DNA/TcMar-Tigger ( Recon Family Size = 33, Final Multiple Alignment Size = 32 )
AGTAAACCTCATTAATTCAGACCCACCAATTTAGAATTCGTGATAATCCG
GACAGGGGCTANACTGAAGTTTANCTTTGTACGATCTATGAAGAAAAGAT
TTGCTAAGCAAATTAATAGNGTAACAAGATTGCAGGAGGANTGTTTAANC
TGTTCAGAAGTGTTTTCAAGCAATTCAGAAGCATTCATTTGCATATAATT
GATATGCTAATTACAAATCATTCTTATCTATTCATTAAAGCAGGTTCCCA
AAGGACCTCTAATTGTCAATAACTTGTTAGCCTAGTTTCTGTTACTGAAT
GTACCTGAGAGTAATAAAACTGCATTTAAAATATTCTCTAATTCAACACT
CTCATTGATNCTNACTGGCTTTCCACCA
>rnd-6_family-310#LINE/L1 ( Recon Family Size = 39, Final Multiple Alignment Size = 32 )
GTCTTAAAGCGGTGGGGTCTTAANGCGGCGGCAGTCTTGAAGTAGCAGCA
GCCCATTCCCAGTGTGGGACCCTGGTCCCTGGTTCCGGAGGGAGCAGAGC
AGACCTTGTTCNCGAANTATTGTGTTTGTCTGTTCTGACCTGTCTGGGGG
CTNCCTGAAGGACTGACGCAAGGCGCTNACCTCTGTTTTGCCTAACTCGG
AACTCAGGCCGGAAAAGCGGCGGGCGTTGCTCGAAAANACCGCAAGGTGA
ACTAACAAACCACGGATACCTGGGGCAAGAGATTGCGCANNGANATACAA
TAGACCGCCTAAGGCCCGGGAGAAAAGCTGGGGGAGATTCTTTGGGAAAT
TAGGGCATTCAAAAGCACCCGTGTATAGGGGAATNTAGAAAGCCACATAC
ATGCCCAGGGCAAGATGCATGCTCTGA
>rnd-6_family-2413#SINE/5S ( Recon Family Size = 33, Final Multiple Alignment Size = 32 )
TCCGTTCCCCGGCCTAGGCGGGCGGCGGGGCCCTGCCGGGACGGGCGGGC
CGCTGGGCTGGCGGTAAGGCCCAAGCGCCCGCTAAGCTGCGCCTCAAGAG
GCAGCCCGCGACNCCGCCGGCATCTACGGCCANACCACCCTGAACGCGCC
CGATCTCGTCGCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTAC
TTGGATGGGAGACCTCCNGGGAANACCGGGTGCTGTAGGCTTTTTGCCTC
CCGCTCCGCCTTCTCCTTTTGNCGCCCGCGGCGGCGTTCGCGGCTATCTC
CGCCCCCCGCCGGGTACAGCTGCAAGCCCCACCTCCTCAGGCCCCTCCCA
CCACAGCACGCGTCNGANGGGGCGCTCCCCGCCTGCCCGGCCGGCCAGGC

>rnd-6_family-60#LINE/L1 ( Recon Family Size = 35, Final Multiple Alignment Size = 32 )
ATTCTATAGCAGTGACGTGTAACAATGTGGATGAACCTCAGCAATCTAAT
ATTAGCAGAAAAAAAAGTCCCAAGCAATTACGTACAACATGATACNCTTT
TTATAAAGTTAAAAACTAATAATTACTTTTTAGGAATACATATAGATGCA
ATAAAACTATATAAAAACAAAGCAGAGGAAAGGAANACGGTTCAGGATGA
TGGTTACCTCGGTGGGGGAAGAGGGATGGGGGGTGGGGACCACGTAGTTG
NTAGATTATTGTCAAGGTCCTAGCTTTTGTTTTGGGTGGTGGGTTCACGG
GTGCTTATTACATTATTAAAAATAACTAACTAAATTTAAAAAGGCCATGC
GTGGACCAATGATGAGAGTGTGTCATGAACCAAGATTATGATTAATCCAA
TTCTGTGCACCT
>rnd-6_family-1397#LTR/ERVL-MaLR ( Recon Family Size = 34, Final Multiple Alignment Size = 32 )
AGTAAAAGTCACAAGGTAATTGTGGTANCCGGNCTCCAAGATGGCCCCCA
NTGATCCTCGCCTCCTGGTAAACCAGCCCCTGTGTAGTCCCTCCAACACT
TAGGGCTGGCGTATGTGTCAGCGGAAATGACAGTGCTGAGGCTAGTCATA
AAAGACATTGCGGCTTCCGCCTTGCTCTCTTGGATCGCTCGCTCTGGGGG
AAGCCAGCCGCCATGTCATGAGGACGCTCAAGCAGCCCTGTGGAGAGGCC
CACGTGGAGAGGAACTGAGGCCTCCTGCCAACAGCCAGCACCAACTTGCC
AGCCATGTGAGTGAGCCATCTTGGAAGCAGATC
>rnd-6_family-2317#DNA/hAT-Charlie ( Recon Family Size = 34, Final Multiple Alignment Size = 31 )
TGAAGCAGTGTAAAATATTTTTCCGTTAAACACAACTTTATTGTTTTGGT
AGGACTACATTTCACTTTAACCGCTGCATCGCGTAAGATGTACTGTAGTG
TACAGTGTGGGTGCACATGTCGTTTCTAGTATCACACATAAACACATCAC
CGATCTAGTTNGTGTCAACGGANTGATTCAGTTCGATTNTTTTTCTACGC
ACCGATGTAACATTGTAATGTGTTTATTTGAATATTTTATGCAGACAGCA
CGAGTTACAGTGATANCTATGTAAATCGTAATTGGTAATTAAATAAATAC
TTATTATTTTAATTNTAATATAATTAAATTATTTTTCTAATTTAAAAANT
AAGTATGGACAAACATTTTAATTTAAACGAAGTTTGGAATNTTTAAANAA
AGATCGAGCGGAAACGTGAATTGACAACGTAGGCACGNTAATGAAACAGT
AAAGAAAATGGAAAAGATGTGTCGCAAATTTCACAATNAATGGCAATTGC
AATTTGCTGCGGCAGAGCAAAATTAAAACTGTTGTGTAAAANAATTTTTA
AGATAATAAAGCGGACAATATTAAGAGACATTTTCAGCAAATACATAGTG
AATTTGATAAGAATTTCCTCTCAACAGTCAAAAAAGAATCGACAAAATTA
GTCGCCTGAAATCAGAATTAAATGTCCAACAAAAAAATTTTTAAATGATT
TTAACAGATCTGAGCTTGTAACTTTGGCCAGCTATAAAATNGCTTGGATT
CTTGCACAAGAAAGAAAACCATTTTTAGATGGAGAGATGGTAAAATAAAT
TATTATTTCAGTTATGGAAGTTNTGTTTTAGAATTATGAGAAAAGATTAA
AAAAGATATTTTACAAAAAGTGAAAGATCTTCAGTTAAGCCACCAAACAA
TTGCCCGTAGAATANAAGACCTTTCTAACAATATCAAAGATCAATTGATT
CAAAATTTGAAAATCGCAAGTACTTTTCTTTAGCTTTAGATGAGTTNTAC
AATATGGAGACACTGCCCAATTAATACTTTGGGTACGTTTTGTCTCAAAG
GACTTCCAAATTTACGAAGAAACGTTTCAATTCGTAGACTNAAAAATCGA
ACTCATGGCGTAGATATTTTTGAATCTTTTACGTCTGTCAAAGAAGAATT
TCAGCTAGATATGAAAAAAAGTTTCTATCATGACGGACGGTGCTCCAGCT
ATGTTAGGTCAAAAATCCGGATTTANTGGAATTTTAAAACAAGAGACTGA
CGTTTCCCTTATTGCTTCGTTCCACTGTATGATACATATTGAAAATATTT
GTGCTCAGTTTTCTGAAGCAGACTTATGAAAAGTGTCATGGATGCAGTTG
TTAAAATCGTTCAGTATATACGTGCAAATGCTATGAATCATCACCAGTTT
ATGGAACTGTTGAAAGAAATAGAAGACAATGAATTTAATGATCTCGTGTT
CTTTGCCAGTGCTCATTGGTTGAGTCGTGGAAGAGTTTTACAAAGATTTA
CTGTACTGTTAACTCCGATTCAAGATTTTCTTGAAACAAAAGGAATACTT
GCCAAATATTCAATAATCAAAGACAAAAAATGGCAGTGTGATTTACGTTT
TCTCACCGATATCACACTGCACATGAACAAGCTAAATTTGAAGCTCCAAG
GAAAGGAAAAGCTTATTTGTGACCTAGCTAGACAGGTACGAGAATTTATG
TTGAAATCGAAACTTTTCATAATACAAATCAATAATGATTTTACACATTT
CTAACATGAATCAATGTGCAGAAGATTTTAATTGTAATCGACAGCGTTAT
GTAAATTGTCTGCAAAATCTACAAGAAAAATTTGAAGAATGCTTTGTTGA
TATTGATAAATTTAGAGTTGCTTTTCAATTTATGCAATANCCCTTTGAAT
TCGATGTTAATAATACTGAGTTGACACAAGAGTTAGTGAATTTACTTAAC
TTAGATACAGTTTTGAAACTGATACGCTTTTGCTTCAAAGTCAATTATTC
TAAAAAAGATGAACCAGTTTTGTCAACGTGGATGCAAATATTAAAGAAAA

>rnd-6_family-3360#LTR/ERVL ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
TTGTGATTTATAAGAAATATATATTTGGTCATTCAGATGACCAAAATATA
TTTCT
>rnd-6_family-1525#LINE/L1 ( Recon Family Size = 34, Final Multiple Alignment Size = 31 )
AAAANCACCTTTAACNATTTTCAGTAATAATACCATTGGGTAGTGTTGNT
ACTGTTATTCTGTGTGTGTATTGTGGGATAAAGCAAATGAGTAATTATGT
TGATGTCATCGGGAACCAGGATTTTCAGCGTAGGAGAAAAGAGATACAGA
TATAAAATCGATGAAGTTAAGTAAAAACCCTGTAGTCCTGAATTTGAATT
GGAAATATCAGTATGAACTCATTTTTTAAAAAAAAATACATTTCCTAGCC
TCGTCCACTGAAAAGGCCTGGAAACAATGNCAACCGAATGAGCAC
>rnd-6_family-10330#LINE/L1 ( Recon Family Size = 33, Final Multiple Alignment Size = 31 )
GGTGAGCACGCTGTAGTGTATACAGAAGTCGAAATATAATGTTGTACACA
TGAAACNTATAATGTTATAAACCAATGTTACCTCAATAAAAAACAAATCN
AAAAAGAAATA
>rnd-6_family-565#LTR/ERV1 ( Recon Family Size = 35, Final Multiple Alignment Size = 31 )
CGCACTCGGANCCCCAGAGTTGGTATGAAGATTATTTTAAGCTGAAGACA
TTTGAGATTCAACAGATGCAGAAAGAAGCCTTCTCNGAGCTTCCCTTATC
TGACTAAAAGCAGAANCTTCTGAGAAATGAAGACTGCCGTAAATTCCCTC
TTCGGGGNGNCTTCTACTCCCAGGAGAGAGACCAAGAGTAAACCCACCAT
AAATCCCCTCTCCGGGGGAGCTTTATGGCCATGC
>rnd-6_family-98#SINE/MIR ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
GTCCCAAGTCATTTCTGTTCTCCATTCACCCAATGCTCCCTGTTGAGGAT
TCCTANGAGAAGTGACTGGACACGCTGGGCAGAGCCCGGGCTGAGATCTC
ATTAGCAGATTTCAGATCCTGGCTCCATCCATTACTAACTTCTGTGCCTC
AGTTTCCTCATCTGTAAAATGGAAATAACAGCATCCCTTCCTTGTAGGGT
TGTTGTGAGAATTAAAGCCACATAAGCTTGTCGTCAGTTAGAGCAGGNTG
NCTCGGCACATGCTGGGTGACTTTAGNAAGCANTAGCTNCTANTACCAT
>rnd-6_family-1216#LINE/L1 ( Recon Family Size = 36, Final Multiple Alignment Size = 31 )
AAAATAAAAGTTTTGTAAAAATAATATCCTAATTTCGTGCGATGAATANA
TGTATGTGTGTATGTATATAGGAAAAGTACTGGAAGGAAATGCGCCAAAA
TGTTAATGGTGAGTTTTGCTAGATGATTTNNATTTTCTTCTTTATACTTT
TCTATATTTTCCAAATTTTCTACAATAAGCACGTATTACTTTTATAATCA
GGAAAAATAATACAT
>rnd-6_family-195#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
CATGCATGCCCAGGGAAAGGCTCAGAAAAGACCTGAGAAGACCTTAAGTT
TACACCTCAGGCTGATCCTCAGCACAGAGACAG
>rnd-6_family-1669#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 31 )
GTGGGTTCAAGTCCCAATCTGAGTTGCACGGTTTCA
>rnd-6_family-5840#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 30 )
TAAGAAAAATTATCCAAAACTTGGAAATAAGGCAAAAGGATGACGCATGT
CCTTTCAATGTCATACTGGAGCATTGTTTAACAGGCCCACCCAAGGATTA
TTTAATTNTCTAGGAGAACGTACCTGTGTTTGACTTTGCTATTTACTATT
TGACAGAGCCCAGACACTGTGAAGTTACATGTTAACTTGTAGATTTCTGT
CCGGTAGAAAAGATAACCCCGAAGGTTATGGTTT
>rnd-6_family-2011#LTR/ERVL-MaLR ( Recon Family Size = 38, Final Multiple Alignment Size = 30 )
GTTGTNAAGTGCTTNCCCAGCGNNCACNACCCCTCTCACTCCTGTGTGAA
CTTCGCGGTTCGGGAGGNANTGNCCATCCCCTGATCCAGGTCTGAGCCTG
TCAGGTAGTCCCACCCTTTNGCCACAATGACCGGCTCATGTAGCCCAGGT
CTAAGCCAATCAGCACATGAGTCTCCCCTGACCACAGGGAACTTTTGTTT
TATANTTGNGGGAAGCCGGCTTTCTCCCTCCGCTGGATATGAACGAGGAA
GCATGTAGCCCTAGTTGCTGCTGGCAGCCATCCTGCGACCATGAGGGAAG
CCAGCCTTAGGACGAAACGTCGGAATGACAGAAGAGCAGAAAGAACCCGG
GTCCTTGATGACGTCGCTGAGCCACTGAATNAACCAACCCTGAAGTCTGC
CCTATCTCTGGATTCTAGTGTGAATCAATACATTTCCTTTATTGTTTAAG
CCAGTTTGANTTGGTTCTTA
>rnd-6_family-91#LTR/ERVL-MaLR ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
TCCTCAGGCACAGGCATATGATGTAACGGGAAACGGGAGGCTGCAAGGGC
TTCTGGGAAGGTTTTCCTCACTTCTAAAGGAGACACAAGGCAGAGCACAC
CCTTTTTCTCCTCTGGANNTTGTCGTCGATGCGTGAAGGCTGGAACTGTC
ATGGNCACCTTGTAGAACGGACACAAGAACCGAACATGCCGAGAATGCAG
AGCGGAAAGATGAAAGAAAGAACCTGGGTCCTTGATGACGTCGCTGAGCC
GNTGAACTAACCCTGNAATCGCNCTNCCTCCGGACTTCTTATTNTGTGAG
ATAATAAATNTCCTTATTGTTTAAGCCACTTTGAGTTGGATTTTCTGTTA
CTTGNAGCCGAAAGCATCCTAACT
>rnd-6_family-558#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 30 )
AATTATTTCNNTTTNTNCCCCCTGAGGCAGGAGATAGATGGGCTCCAGGC
TAGGCATTTACAACTGGCCTCCCGTTCACACTTCCTGGGGCGAGAAGAAG
ATGGGCTTCAGGCCGGACACTTACAACCAGCCTCCTGTTTGCATTTCCTG
AGGCAGGAGACAGGCGGGCTCCAGGTTAGACATTTACGACCAGCCTCCTG
TTTGCNCTCCGAGATGGAAGTAACAACAGGA
>rnd-6_family-102#LINE/L1 ( Recon Family Size = 35, Final Multiple Alignment Size = 30 )
TAGAAAATATCAACAAAACTAAGAGCTGGTTTTTTGAAAAGTAAACAAAA
TTGACAAACCTTTAGCTAGACTAAGTAACAAAAANAGAGAAGGTACAAAC
AAATAAAAGTAGAAACGCAAAAGGAGAGAGGGGATCAAGATGGCGGAGTA
GGAGGACGCGGAGCTCACCTCCCCCCACGAACACATCAAAAATACATCTA
CATGTGGAACAATTCTCACTGAAAACTAACTGGAAACTGGCAGAAGGACT
CCTGTACAACCAAGGCTGTAAGAAAGATCCACACGTAATCGGGTAGGAAG
GGAAGAAAAGCGATCGGGTCGGGACCTGTGCCCCTGGGAGGGGACTCAGA
GGAAAAGGGAGATTACATGGGTA
>rnd-6_family-2326#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 30 )
CCAGAACTGGAAACTATAGAAAAGGAATCAAATGGAAATTCTAGAACTGA
AAAATGAAATTAAGAACTCAGTGGATGGGTTTAACAGCAGATTAGACACA
GCTGAAGAGAGAATTAGTGAACTGGAAGATAGGTCAGAAGAAAATATCCA
GANTGAAGCACGGAGGCAAAAGGATGGAAAATACAGAAAAGAGTATAAAA
AACATATGGGACACAGTGAAAAGNTCTAACATACGCGTAATTGGAGTCCC
AGAAGANAGGGAGAAAGAATGGGGCAGAAGCAATATTTGAAGAGATAATA
GCCGAGAATTTTCCAAAACTGANANAAGACATCAAGCCACAGATTCAAGA
AGCACTATAAACCCCAAGCAGGATAAATACAAAGAAAACCACACCTAGGC
ACACCGTAAATAAAGCTGCTGAAGAACAAAGACAAAGGAAAATCT
>rnd-6_family-6228#DNA/hAT-Tip100 ( Recon Family Size = 34, Final Multiple Alignment Size = 30 )
TGTACAGTTGTGCAGGTTGTGCACTGCACAAGGAGGACGACATTCACAGC
CTGGTTGTACACATGTATGTATATTTATTACGACAGTTTTCCAGCAGATG
GCAGTAAAGTGTCTGTTCTAACAAAATCAGTATATTATGACAATTTTCCG
ACAGATGGAAGTAAAGCGTCTTGAGGAAGGGGCGCCTTTTTCTAATTTT
>rnd-6_family-3390#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 29 )
GGGTGAAATGCCGGTACAGCNCGGTGACCATAGTTAATAACACTGCATTG
TACACTTGAAAGTTGTTAAGAGGGTAGATCTCATGTTAAGTGTTCTTACC
ACAANAAAATAAAATTGGAACTCCGTGNGGTNATGGATATATTAACTAGA
CTTGATTGCAGTGATCATTTCACGGTGCNTATCAAACATCACATTGCACA
CCTNAAATATATACAATTTTTATTTGTCAATTATACCTCAATAAAGCTGG
GGG
>rnd-6_family-1229#LTR/ERV1 ( Recon Family Size = 40, Final Multiple Alignment Size = 29 )
GTCGTATGATCATTTATAGTGTTTTCTTGACTTCTTGGACCTTTGCATAT
GAATCAAATGTTTTTCTATCATGGGCACGATCCTATGCTAGTTTTAAAAA
TCAATCCAATTGTTGGGTTTGTGGCCAATTACCTGTGTCCAGTACTTCTG
GGTTACCTTGGTGGATTTCTCCNCTCCAAGGCTCTAACTGGNTGGCCCTT
AGGAAATTTATTTTAGAAGAAAGAAGTTATAGTCCTGTTCAGGCCACTAT
TGATATTACTAGATGGGATCCCCTCACCTGGCCAATTAATAATACCTGCT
CTGACCCTGGCCATAAANATGAATTTTCCTTTAAAGTTACTCAAGCTCAA
TCAGAGCAACAAGCAAATTTCAGCCAAGGAATAAAACCTCCCGCAATTAC
GGGATGGATTTATGTGGTTAACACCAGGCTACGGTCATTTAAGTTTAAAG
GCTCCTCTATGTTGGGAACAATTAAATCATACTAAGGATAATCAGCCTAG
TAACACTAGGAAATTGGGCTGGGTGCCTTATGAACAATGCCAATATATCA
TTNCCCTTAAAGATAGNGATTGGTACGGAACAGACTGGGTCAGACGACCG
GGGATATACTGGGCTGCACCTAATGGAAGTCANTGGATTTGTGGTACTNA
TTTATGGCCTTGGCTTCCCCCAGGATGGATAGGAAGATGTACCCTNGGAT
TCCCTTGGGTTCAAGGTCATATACGTANCAATTTAGANATGACCCCAGCN
AATCTACCATTGGTACGAGCCCGACGGGTCAAGAGATCTGTATTTCGCTG
GTATGACCATTTAGCAGCTATTTTTGCGCCTTCAGTAGGACTGGAGGATG
TAATCGGCCATATCGAAGCCTTAACAAAATTCACTCAACAGGCTTTAAAT
GATAGTNACCAGGCTATTAGCCTACTGAATTCTGAGGTCTCTATGATGAG
AAAAGCGGTGTTACAAAACCGCATGGCCCTTGATATCCTTACAGCATCTC
AGGGAGGCACCTGTGCCATAATTCAAACTGAATGCTGCGTTTTCATACCA
GATGAATCCTCTAANGTNACACATTTAATGANTCACATGAAAAATCAGAT
TTCTGCCTTAAGCGATCCACTCCCTAGTCTTGGCGACCTCTTNAAAAACT
GGTTTGGCGCCGGAAGTTCTTGGCTTAAATNCTTACTTATGACCTTATTA
ATGCTACTAGCTATATTACTTGTATTTTGCCTGTTTTACAAGATTGTTGT
TTCTTGCATTACCAAATGTGTGACTGAGCCTCTGACAAAAATATATAGTT
CTATATGAGATCAATGATTGTAATAGTGTAACTCTAGATATGGGAAGAAG
CAACAAGAGGGAATCATTTCCTGGACCATAACAGACTAGTAATAAGACAG
GCGGTCCAGAGACTTTTGGCTACTGTTAACAGGGCCTAGTCCAGTAATAG
CACATTGAGTGGCCTATCAACGAAATCCTCGCCTGACCTAGGAATGAGCN
TTCCTAGCGCCGTGGGACGAANTGGTCATGAAATGCCTCCCAAACCTTGG
TCGAATTTATGACCANGAGGGGGCNCTGCCAACTAAAAATTGGCAC
>rnd-6_family-368#LTR/ERVL ( Recon Family Size = 31, Final Multiple Alignment Size = 29 )
TGTAGCAGACACTTTTGGTGCCCCGGCCACATCCCCTCGGCCCACCTCTG
ATTTCAGCCGCAGCTGCGGTGGACAGTTCCGCGCAGGCTGACAGCNTCCC
ACCTCAAGCGCCTGGCGCTCTCTCTACTTTTCTGCCCCAGAGCTTTCTCT
TCACAAGCCCCCTCNGCCNACGNNCAGNGCGGCCTGGAGGTGCTGAGGGT
AGCACCTGCAGGCGTCA
>rnd-6_family-1649#LINE/L1 ( Recon Family Size = 33, Final Multiple Alignment Size = 29 )
GGATACAAGCAACAGAGTCTCTGGCTTCAGCTTCCCTGAGAGTTTACAAG
AGCCCCTTCTGGGGAAGTCGGTGGNCAAGGTCATGAGCGAGTCCTGGGAA
ACTCTGCACAGTCGGGGCATCTGGCAGGGCTGTAGTGTGGGCCAGGTACT
GGAGTCCGGCAGAAATATGGTCAGAGGGAGTGGGCTGCTCTGTATTTTCT
GCCATGGCCTACCTCCAGCTCTCAGGAGTAGGTCAAAGCAGAACACTTCC
GTGGGGTGAAATGAGTGTCCTCAGCTGATCCAGGCAGCAGGGCATGGAGG
GGAGAGCAGGAACTTCATCAGCACATGGTCAAGACACAGATAAGAATCTG
GGCCAGGCTCACCCGGGCATTCTGTCCTCAGGTTAAAAAGATGGTNCAAT
GGCAGTGGGGATCTGGTGATGACAGCCCTCAGCATGTCTGTCTCTTGAGT
CGCATGCTCCAATCTGGNCTCGTTCCTCTATGTCTGGTGCATAGCTATCC
TGGGATCTCCCTTCACCGTCNTCCTGGGAATTCCCTTCGCCTCTCTCCTG
TGTTGGATCTCCTGTTTCCTGTAT
>rnd-6_family-4086#LTR/ERV1 ( Recon Family Size = 43, Final Multiple Alignment Size = 28 )
AGTTATTTTGGCGACCACGAAGGGACCCAGAGCAGACTTCTCTCCTTCGC
CTGAACTCTACGAGGATCCGGAGCCTTGGTACCAGCAGAGGCCCCTTGCG
CCCGTCCGCCTCCTCGGAGAGTCCAGACGAATTTGGGTGAGTCTCTCCTG
GTTCTCGGATCTCCCGTNTTGGTTGACGATCCTGAGTTTTATTCGGCGGT
GTAGCAGGTACCTGCTCCTCCCAGTTGAAAGATACTGGGGNGGCCTCGGT
TGAAGAGATACCGGGGATATNCCCAGTTGAAAGACACTGGGAAGGTTTTG
CTCGGTTGAAAGACACTGGGGTTCGCCCAGTTGAAAGACACTGGGGAGGG
TTGAAAGATACCGGGGTTTGCTCAGTTGAAAGACACTGAGNGGTCTGGAC
TGGGTGATTAGGTGGGAGGCTGACCTGACGCTTTTCCTCGAATCGGCTAC
CTTAATAGAGTTTGTCGGGATAAAAGTGAAGATATCACATGAGAGCTTTC
GCTCCAAAGAAAAGGGACANGGCTCCTCCCGGCCGGTTACGGCTTTCTCA
GGCGACTGAGAAATTTACGGGAGTGGTGGAGGCAGAGTCCTCATACCGTG
CAGCGGTCCCATAGGGAAACCCACTCATTAATTAAAAACTCGCTCGTCCA
GGGGNCGCGCATAAGATTGGCCATTCAGCGATCCGAGCGCCCACGGTGGT
TTTAGACCGCCGGAGGGAGAAACCGAGACACGTAAAAGGGCTGAAACGAC
TCTAGGGTGACGCCTAGAGGAGTTAAGCTCACAAGCAGCACACTGGCCCA
CCACACANTTTCACTAGTAAATTTTATCCCTGACAAACTCAACTTTAAAA
TGGGAAATAGAGCCTCTCAAACGCAGAAACGAGGGGCGTCAGANAGCCAG
CCTCCGACTAACACCCCAGCCGGGTTTATGTACGTACGGAACTTATACTT
GCAAGTACTTACTTAATTGGGGAATACTAAAGGAAATCTCGCCCTGAAAT
GGCCAAGATGGGGCTCTTTTGGCATTCCAAAACTGAGTTTTTGCGCACGC
AGTTAAGAGAAAGCCGGCTTGATAAAACAGACTGAATGGAATGCTTACTT
TGATTGGTATCTAGAAGCTTCTAAAAGAGGAAATGATAGAGTAACTTCTT
TGCAGGAAACCGACAANNAATTNCTTGAAACTATATCAGA
>rnd-6_family-2288#LTR/ERVL-MaLR ( Recon Family Size = 34, Final Multiple Alignment Size = 28 )
CATCCCAAGGGCAGTGCCCTAAGGAGAGTCCGTGAGTTCCTGCTGCTNAG
GTCCCCAGAGCTGCCCTGGTTCCCGTTCTTTCCAAGCCTGGCTCTTCAGC
TCCTCNTCGATTCTGTGAGCTACCTNATATCCTTCCAATAAATTCCTTTC
TGCTTAAGTTAGCCAGAGTCGTTTCTGTTGCTTGCAACCAGAGAACCTGG
AGCTGATATAATA
>rnd-6_family-9812#LTR/ERV1 ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
ATTTCTAGGCCCAAGATGGAGCCGCTCCTGCCCGGGTGCCACGTCAGCAA
ACCGAAACTTAGATAACTTTCGTGTCCCTGTAAATGCTCCGCTTGAGATA
ACTTTCGTGTCCCTGTAAATGCTCCGCTTGACCAGAAACGCAGTATATCC
AGTCAGCCAATCCCCAAACGCCAAGCCAACTCTGGGCCTTCTCACCCCAA
ACAAGGTTGACTACGTGGCCCCAGCCAATCAGATATTTTCTATTTNTCTC
TTCCTTGTTCTTTATTCTTTATCCTATAAAAGCTTCCTGCCTTCCGCCCC
ATTTTGCAGTTCTCCGAANGGAGACTGTCCGCTTCATGAAGTGTTAAATA
AAGTTTGTTTGTATCACCTAAATTGTCTTCTTTAATCATTTTTT
>rnd-6_family-5712#LTR/ERVL ( Recon Family Size = 34, Final Multiple Alignment Size = 28 )
AAAAGAGGTACTGAACAACCAGTAGACAAAATGACTCGGCCAGTTGACAT
TAGCCAGCCTCCGTCATTGGCCACCCCAGTGCTGGCACGATGGGCACATG
AACGGAGTGNCCATGGTGGCAGAGATGGAGGCTACGCATGGGCCCAGCAG
CATGAAATTCTCTCACCAAGGCTCTAGCTACTGCTGCGCTGAATGTCCAA
CCTGCGACAACAGAGACCAANGCTGAGCCCCAATATGGCACCATCTTCAA
GGAGACCAACCGGCCACTTGGTGGCAAGTTGACTACATTGGACCCCTTCC
ATCCTGGAAGGGNCAGTGGTTCGTTCTGACGGAAAATGCGTATCTTGGGT
ATGAGGNTTTGCTNTGCCTGCTTNCACGGCCTCAGNNANCACCACTANCC
GGGGNCTTACTTAGTATTGAATGCCTGANTCATGGTCGTANAATCCCACC
AGGATAACATCTNCACAGGGACCANTTCACAGCAAAGGATGTGCAGNAGT
GTTCCCGTGACCACGGGATCCACTGGTCATATCACATACCGCACCATCCA
GAAGCAGCCGGCTTNCAGGNNTGGAATGGCCTGTGAAGGTACAACTGAAG
CGCCAGCCCGAAGTGGTATACTGCGAGGATGGGCGCCATCCTCCAGGATG
CAGTATATAGTCACAATATTGGGCTTNGGNNCNAATNGGNAGAACACTTG
GGTCTGGNAANCNGGTGGTAGAAGCAGGAGTGGCTTTGCCTACCTTCNCA
C
>rnd-6_family-4374#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 28 )
ACATCTTCCNTGGANAAACGCACCCTCANNCCAGGCCTCANGGAANCCCC
ACAGATAACAACTAAAGAAAATCAGATCACATGAGNAAACAAGGCACCAT
GAGTGAGAACCAGNAGAAAAAAGAGANACGGTCACAAACGCTTCAGATAT
TGGAATCGTCAGAAACAGAATATAAANTGTTTNCTATGTTTAAAGAAAAA
AGAGGGNATTAAAATATACAAAGCTAAANAGGAGACTATAGAAAGTGACT
AAGCAGATTTGAAAAAGAACCAAACAGAACTTCTAATATAAAAAATTAAA
GCTCAATGAACGGGTTTGGCAGCATATCAGATAAAGAGAATTAGTGAANA
GNAAGATAGATCTGAAGAAATTATCCAGAATGCAGCACAGAGAGACGAAA
AGATAAAAATGAAGAAGAGACACGGAGGACAGAGTGAGAAGGTCTAACAT
ATGTCTAATCGGAGTTCCAGAAGAAGAGGAATGAGAGAATAGGGCAGAGG
CAATATTTGAAGAGATAATGGCTGAGAATTTTCCAGAACTGATGAAAGAN
ACCAATCCACAGATTCAAGAAGCCCAAACGATCCCAAACAGGATAAATAA
AAAGAAATCCACACCTAGACACGTCNTAGTGAAACTGCAGAACATCAAAA
ATAGAGAAAATCTTAAAGCCCAAGAAATGGGAGACATTATTCTTCGANAG
ACTGACAGCAGACTTCTAACAGAAACAACGGAAGCCAGAAGGCAGTGGAA
TANTATCTTCAGNNTACTAGAAGATANTTGTCAATCTAGAATTCTACACC
NAACGAAATTATCTT
>rnd-6_family-414#LTR/ERVL ( Recon Family Size = 35, Final Multiple Alignment Size = 28 )
ACAACTGGCAAACCTTCATGGACTTAATCAATACTGGGTTCAAGTTACAG
TTATACCTGGGGATCCCACTAAATTTAAACAACGTTACCTCATAATCTTA
GGGGAGTTACCGAACATTAAAATAGAGGACAAATAGCAATGCCTCGCCTT
AACCATCAGAACTACTCGTCTTGCCTAAATTCCCCATGGTCATANCACCC
ATTGCCCTAAAATATCCCATAGCGAGCANGGANGCTCTGANCCAATGAGC
AATAAGTAAAATTAAATACGTCTTTGGCACTTNCAAACTGGCTTGACAAA
ATGGGACCCCATAGGCCTTACCATCCCTTAATGGTTAAATTAGTTAATAT
GGCCCAACATAGATTAAAACAAGGTCTNNAGGAATTGAAANCCATTATAC
AAGACCTATTNAGGGAAGGGGTNATTATCTCCACTATCTCCCTNTTTAAT
AGCCCAATTTGGCCCGTTCTTAAACCTGAGGAAATGAATGGCGCCTCACG
GTGGATTACCGCAACCTTAATGCTGTGGTCCCATCNATTAAGGCCCCCAT
ACCCAACATTATTGAAATTACTGACTCCATCCAATCAGCAACTGGTAAAT
ATTTTGCTNTTACAGATTTGGCTAACATGTTCTGTTCAGTGCCTATTTCA
ACAGCCTCTCAGCCGCAGTTTGCCTTCACCTCCGAAGGGACACGATACAC
CTTTACCTGGCTACCCACGGGGTACCTCAGCGGCTCTGCCATCGCGCACA
ATCTTCGCAGGCAAGATCTTAACCGCATCGCAGCTTTCTCCAGGAGCACA
GGTATGACATTACATTGATGACATCCTCCTCCGAGGAGATTCATTTGACA
CACTCATTCAGGACATACAAACATTCACAAAGGAGCTCACAAAAAGGGGA
TGGGCCATTGCCCCACATAACGCAAGGCCCTACCACCTCGGTTAAATTTC
TGAGAATTATTTGGTAAAGAAACAGCTCCTCACCTTATTTGCACCCACTG
ATATTAANGCAGGCCCAACATCTTTTAGGTCTTTTCGNGTTCTGGAGGCA
ACATATTCCTCGTTTACAAATTTTACTTAAGCCCATTTATGCTGTTACTC
GCAAATCGGCCCACCTTGAATGGGGCCCCCTNCAACAAAAGGCTCTAGAA
TCTGTCCAAATTGCAATCAACAGGCACTCCCGTTAGTGCCCTCNGAAGAC
TCCTTCACTGTAGAGGCTTTAGCAACCTCCTCTCATGCCTCCTGGAGTCT
CTGGACCACCCACGATGGCCATAAGTTGCCCATGGGCTTCTGATGCAAGA
AACTGCCCTCCTTGGCCCCGCGCTATACACCATTAGAGCGGCAANTGCTG
GCCACGTACTGGGCTCTCCTGGAAACAGAGGCTCTCACAGGCCCCGAGCC
TGTGACCCTCCATACCCAGCTGCCCATTATGCCTTGGGTCATGGAAGCAG
CACCCCACAGGCTCGGCACGGCTACCGAGGCCTCCTTGCTAAATGAAATG
TACTACAGGATGGAGCCAAACCTGGGCCCTCTGGCATATCCCACCTACAG
GAGGAGGTGGCTTCCCCCGTCCTCAGTCCCTTGCCAGATGCCATGGCGCC
GGAGGAGGTCACCCCTCTCCCAGACCCCTTGGCTACCTGGAGAGCCCCTT
GGGATCAACTGAGTGANCAGNAANGGGAGTTCGTATACTTACGGATGGCA
GCGCCACCATCGCACGTGATGGAGCTCGCTGGAGAGCTGCTGTTCCATCC
CTAACCAGGACGTCCCTGATNAAGGATGGGACCCAAGGGTCAGCACAACT
GGCCAAACTTCAGGCAGTCATCTTAGCACTAGAGGATGCCCTGGCCAACA
ATCTGCGCCCTCTGCACATTTTTACAGACTCTTGGGCCATTGCCAATGGT
CTGGCCGTCTGGTCAACCAATGGCAACAACAATTCCTTATCCAAGGTTGC
CCCCTTCGGGGTAAAAAAACTCTGGGAATCTCTTGCCTCACAGATACCCA
AAATATAAATCAAAGTCACACATGTCTCTACACATACTAAAGCCACAATA
CAAGGCCTCGCCAGGACACTCCTTATCCCCTTCGGAGTTCTAGACATTAC
TGATAGCGACCAAGGCACTCATTTCACTTCTCAAAATACGCAATGCTGGG
T
>rnd-6_family-479#DNA/TcMar-Tigger ( Recon Family Size = 28, Final Multiple Alignment Size = 28 )
AGAAGCGCCAAGCGATAACGATGGAAACAAAAGTGAAAATAATTGAGAGA
GTGGAGCGAGGCGAAAAGATGGTAGACGTCGCTCGTTCTTATAACATGAA
TCGTTCAACCATCGGCACGATTCTAAAGAACAAGGACAAGATCATGGAAC
ATGTGAAGTCTGCTGTGCCGATGATGTCGACAATAATATCGAAGAAGCGT
GGAAAAGTGATGGAGATGGAGAAACTTCTCAGTGTGCGGATGCAGGATCA
GCATCAGCGTCGAGTCCCGCTCAGCTTAATGCTGATTCAAGAGAAAGCTA
AAAGCCTTTATGAAGACTTGAAGAAGAAACACGGCGAAGAATCAGAGGGC
GCATCTTTTAATGCCAGCCATGGCTGGTTTCATCGGTTCAAGGCTAGAGC
CAACCTTCACAACGTAAAAGTAAGTGGCGAGGCAGCGAGTGCAGATGCGT
AGCTGCCCGGAAACTTCCTGAAACGCTTCGAGAAATT
>rnd-6_family-112#LINE/L1 ( Recon Family Size = 29, Final Multiple Alignment Size = 28 )
TGAAAACTATGAGATAATNTGTGTTGTTTTNATACTTACTAGGATTCTGT
AAATGTCATAGAAATAACAGAATTTTCATTGTAANANAAAAGNAGATANA
AATGTAAGANAAAATAGGTAAANACCCTATAGTCCTAAATTTGAATTGGA
AATATCAATATGAACTCCTGATGCCCTAGGTCTTTCTNCTAAAAAGGCNC
AGANACAGTGAACATCCCCTAGCGCCCAAATTGTGGTCTTGAAATTCTGT
TTCCCCANAAAGAAACCAAGGCTCCTTGGAGAAAGCANTACGNATCTGAG
GCAGAAATTATACGAAATGAGCCTGGAACATCTTGTCATACCATANAGCG
AGGAAGCTACCAAAGACTACTAGGGTCATGTCAGGAGCCAACTTGAAGAG
GCTCCCACTGGCCAAAGATGGGACAATTTGAGCATCAGTAAGGATAATAA
CTGCAGTGGATTGAAACACATCAAATATGTTTAAATCCATGAGTTCAT
>rnd-6_family-927#Unknown ( Recon Family Size = 30, Final Multiple Alignment Size = 28 )
CGTTCACGAACACCGTTCTGGCACGTCCCACATGGCGCGGAGGTCTT
>rnd-6_family-4435#LINE/L1 ( Recon Family Size = 30, Final Multiple Alignment Size = 28 )
AGAAGAAAAGAAAGGCAATTAGAAACTCCAGGAAAAAAAAAAACTGTGCA
AGAAAGTCATGGTCCAAATATGAAGCAAACTAAAATGTGGCATGATTTTA
GAGCAATTGATGGAGTGTGAGAAAAGAGAATCCATTTGACCTTGATGTAA
GAACATTCTCCTTCGAGTGGCCCAGGGGTCGTGACATTGGACCCGTAGAG
AAGAAAATGTAATCCTAGCACACTACTTGGCCTCCTGGCAGTGAACAATA
TTTACAGTCATAATAATGTAAATGCCGTTTATTGGTTTTCAACTTTTAGA
ATCAACCTATAGACAAAGCACGGAAGACTTGATTGTGTTANAGGACAGAA
TATAAATAGTTAACAACCTTGACAATGTAAAAAGTATAAGTGTAGCTGGC
GGGAGGTATGATAGGGAAGTACCCAGGANAGGGCAGGAATGCTAATATCC
TCACCTTACAGAGATGGGTGAAAATTGACGGATTAAGAAANGGGAGGATA
GAGAA
>rnd-6_family-4527#DNA/hAT ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
ATTGCTTAGTGTTTTTCAAATTCCCGACAGGTATTAATCTTCGGGATTCG
GGAACAAGAAATCGGAATTCCCGGGAATTCTCAAAATCATAAATTATTCT
GTATTTTTCATAACACTTTATTTACGTGTTTTTAAATAATAATGAGTGAC
CATAATAATAAACAGTGAATCATTTTTCTGTGATAGGGTTATACTAAAAG
TTTCAGAGGTTTTCTGTAAAAAGATAATAATAAACGCATGGTTTGTTATT
ATTATGAANCAATATATTGTGACGAGATTATATATTTCAATAACACGTAA
AAATGATCTCTACCTGATATAGACATTTGATAATAGAAAACATTAAAAGA
AGGGAACATTAACACAAAATAAACGCCAAATAAAAATCATTTTAAAATTG
AAATNTAACACAAATATTTNTATAAAGGTATCGTTCTTAAAATGAAANTT
TAAAACGCACAAAACATTAATTGCCTAACCAATTTTCTTTTTTGCATTGA
CATTNGTCGAATTGTTAAGAGTGCGTCCAAAAGCANCTTCAAGTTGGGCG
TTAGGGTACANATTGCTTCATATAAGCTCATTTCCTTTTTTAACGATNAA
AATTTATTTTGTCTGCTTGCCCTGATTTTGGTTTTGCCNTCGAAATTGAT
ATTGCTTTTGCTAATTCAGATTTTAGATCAGTTTCTGATTTCATGTCGGA
GTATTCCACGACAATTCATCTCCTCTTTGCATTTCTTCCAGTTAAAGTAT
TTACAAAGAACTGTAGCCTNCAGCGAACATTCAAACACTGGAAAACGCCA
GTGAACATTATTGGGTAGTATTCAAATAACATAACATTCGGATCTCCTAG
CAAGGTTAACANCACTACACGGAATCGCGTGTCGAAATTGAGCTTTTTGC
TTCCGAAACTTATTTCTTGGAACACCACTCATAGGATTTGTATAAAGTAT
ACTATGTGCATACAAACTTATTAATATTTATTTGCAAGAATGACTCACCT
AGCAGCAGACAGGGCCATGAACACACACTTATAACATGGCAACGGCTACA
AGCAAGACTGACCGATTAGATCCTCCTCTCCTACGCGCTCCTGTCCCTGT
TCCCGGAAATGTCGACCTTAACCTTCGACTCCGCGTGTCAGCGTTTCCTG
CTCTTGCTTTCAACTTGACGTCAGCGGATTCCTTCGAACCAGTAACATCT
CTATGTTGATTGTTTAAGCTTTAATTCTCGCAGGAGAATNATAATACTTT
TTCCCGTTTTCCCGATTTCTCGACTGATTTTTCGGGACTCGGGATTCGGA
AAAACATATACATTTCCGAGAAATGCCGGGAAGGAATTCCCGCATGAAAA
CA
>rnd-6_family-2789#Unknown ( Recon Family Size = 28, Final Multiple Alignment Size = 27 )
AAACAACCACATCCTGCACACCTAGAACAAGCAAAACATTGTAATCACAC
TTGCTGTGATAAAAAATGAAAATTAAATTTAAA
>rnd-6_family-12167#DNA/hAT-Tip100 ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TACCTGGGGCGGGGCGGTGGGGGCGTCCGCCCCGGGTGCAGGCGATAAGG
GGGTGCGTTGTCTGTAGAGAATTTAAAACAATAATAAAACCGACTGAAAT
TCGTCTCTTTTTATTATCACCATGCGCCGGCAATTCTAAACANTGTCAGT
GATAAAAATACTCCTCCTCGAAAAAATCTTTTGTTGGTCTAAGTTCTAAA
TAATTCGTGGTTACTGTTGAGTTTTAATAATATATATGTAAGCTTCAGAT
TAGCACATTTTTATTACTTATCCTNTAATAAACATTGTATTCTACGTGGA
AGTTAATTCGGAGAACTCCCAGTTATACAGTCGGCTCCCCGACACACGGG
ACTCAGCTACACGCGTTCGTTTCGAGAGTAAGTTCCAAGGTTCAGAATCG
TTCGAGCTCGCTTTAGGGGCAGTTCGTGTCTCCAACCCCTGTGGTACTAC
ATATTCCTGCGTTTAAACGGTAGATTCGAAATAAACAGTGATAGCACAGT
GATCGTAAAGACGAAGAAACAGAACTTGAGTTACTTCAATTCTGTCATTC
TATGTGACCACTTGGAATTTTTATTCGTGTTTAAAATTTAAAACAGTGAA
ACAGAGTGCGAACTGCGAGTGTAATATTTTTGTTTGGTAAGTGCAAATTT
TAGTTCATACGTGAAATATTTTACTGAATTTGAATAATATCTTTAAAATT
GAAATTTATTCTTCTTTTAAAATTCTTGTTATTTTAAAGCTAAAAAACGA
ATCAAGAAACAAATTGTAATGTTATCATTNGTTATTGCAACAACCAATAT
GTAGGTNTAAGTTGCCTTTCTTTCAAAAAATACGTTAATANAATTNAAAA
GTATTAATCCATTACTTCTCTTTTTGTACTNTAATATTTTACTTTTTTAC
TGGCATGATTATATATACGAAGTTCAATAAAAGAAATTTTCACTGCATTT
CTTTTCTGGCCATATTTATTATTATTTGTTTCATTTCATGATTATTACTG
AAAATAATTTTGTCGTATAGAGGAGGGGATGTTTAAAAAATGATCCGCTC
CGGGTGTCAAAATGCANCATTGCCCC
>rnd-6_family-979#LTR/ERVL-MaLR ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
TTTGAGCAAGTTCCTTAACTTTGGTAGCCAGCCTCCAAGATGGCCCCAAT
GATCCCCACCCCTGGTATTCACGCCCTTGTGTGGCNCCCTCCCACNTTGT
ACCAGGGTTGNTCTGTGTGACCGATAGAATACGGCAGAAGTGATAGCGCG
TNACTTCTGAGGCTAGGTCGTAAAAGGCTCTGAGGCTCCCTACTCGGTTG
CTCTCTTACATCNCTCGTTCTGGGGAAAGACAGCCGCCCCGCATGGAAAG
ATCCACGTACGGCGGACTGAAGCCTCTTGCCAACAGCCACGTGAGTGAGC
TTGGAAGCGGATCCCCCAGCCCCAGTCAAGCCTTCAGATGAATCTTGACT
GAAGCCTCATGAAGGACCTTCCCAGAAACANCCAGCTGAGCCTCTGCCAG
ATTCCTGACCCANAGAAACTGTGAGATAATAAATGTTTGTTGTTTTAAGT
CTGAGAACAATTTATTACGCAGTAATAGATAACTAGAGCACCCTCTCAA
>rnd-6_family-4761#LTR/ERVL ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TACTTGCCCCAGGCCCCAGCTAGTGATTGTTCTTATCAAAGGGGCGGTGA
GGG
>rnd-6_family-512#LINE/L1 ( Recon Family Size = 29, Final Multiple Alignment Size = 27 )
CAAAAACTGATGGGAACACGTCAAAAGGACACAGGAGCCAGCTTGCAACG
GGCTCCCATGGCCAAATCTGGGANAATTTGAGCATCAAAATAAATGATGA
CAGTAACGGATTATAACCCATTGAATAAAATAAGAATCCATGAGTCCAT
>rnd-6_family-523#LTR/ERV1 ( Recon Family Size = 30, Final Multiple Alignment Size = 27 )
ACTGTCAAATTTAGTAACAGGATGTTGAATGGGACTTTTCCTGTTGTCCC
GGAATTGCGGCTAAGGCCCAAAGCTGAGGACAAAGAAGCGTTCAAGTACC
CCACATTCTAAAGAGAGCCACCAACAGTGGGGCCAGACACCTTCCAGGGC
TTNTTGAGAGGCAGCAGAACTGGCCCTACTGTCATCAGCCACCCA
>rnd-6_family-1403#DNA/TcMar-Tigger ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
ATTTTCATTTTACAGATCTTTAAATTAACTAAGTGTGGGGAAAAGTTTGT
GTTCGATTAGAGATCACAATATGTGGAATCAAAAGAACTAGGGTTTGAGT
CCTGATTCTATCCAAACTGTTTCAGCTTCCTGCCCTTGGGTGAGTCATTT
ATCAATTCCTTTGTTTTTGAGGCAGAGATAGCAGTAATGGATTTTCGACC
GTGTGGGGGNCGGTGCCCCTAACCCCCTGTTGTTCAAGGG
>rnd-6_family-4980#LTR/ERV1 ( Recon Family Size = 33, Final Multiple Alignment Size = 27 )
TACTCGTCAATGGCCAGACGATGGATCCTTTGAATTGGAAAAACTTCTAA
ATTGGTAAATTTTTAGAGAGCTCTCATCATAAACAGCTGTTTTATTGGTA
CCTATGGAAAAANCAAATTAAAAGGTGGATACAAAGAAATATAATTGCTA
ACCTTAAGAACTCCTTTAGTTTAAACAAAAGAAAAAACGGTTTGGGAAGC
CTTATTTGTGGTCTCAGCTTCCCTTAATGGGTCTTACAGATGCTAATAAA
AACATTAGGTTAATTAACAGGGNAATAGGAAAAAGCTGAAGGGAAAGTCT
AGGNAACTCTTCCCAACAAGGTGGAAATTTTAAAGGGACTTGTCTAAGTG
AATAAAGNAAATATTGAAGGGGACAGAACAAAGAGGAATTATAAAGGGAA
GTCATGGGACTCGTCCCAGAAGGATAAGAAATCTTTAGACGGTTATTNAG
AAATGGGATAAATAAAATGGACATTNATGGGATTAAAACAAAGGTTTTGA
TACAACACTACCTAAGGTTGGATGGGCCAAAGGGACCCCCTATTGGTCCC
CCAACATTAAAGGGCCCCAAACAAGTCTGCTCTATTTACCCCAGTTTGAA
GANATTTGCTAAAGGCCGGAAGGCAAAAAATTACCGTGAGAAATCTGACC
AGCCGTCGCTTGGGGCAAGAGTNAGGCCAATGAATCCAGTGAAAAGTTGA
CAGAGGGGCCTGGGTCCCTCGGCTCGACCCCTTCAGGGGGAAGCCAAAGC
CTTTTACGCAGGGATGAAATGGCCAGGGGATGGAGAGGAGTTTCCGGGAC
TCCTCGATGCGGGAGCCCCGGCGCTGTGGTNCCAANACCNGTTGGTGGAG
CTTAACGNAGGCTACGATTAAATTGAGAGGAACGAGGTGCAAGNGTTGAT
AGGATTGTGAANGTTGGAACGCTATGTGAAGAGGTTTGTATNANCGGTTG
CCTGATTGTATTGTGGGAATGGATATTATGTCTCACTGGGGAACGCTTCC
CCTGCCTGGTATTGTAAGACAGAGACTTGTTGGTGGGGTCCTAGTGGAGG
CTAGAAGGTATAAGAGTTGATGGAATTGAGGTGAAAGTTTATAAGAAAAT
TGGTATATTTGAACGGGCTTTATGTAAGGTGGTTGCATCTCTTTTGCCTG
ATTGTATTGTGGGGATGGACNTTGTGTCTCACTGGGGAATGCTTCCCCTG
CCTGGTATTATAAAACAGGGCATATAAATCCGCCCTTCGGCCAGTGCGAT
GTTCATGAAACACGCTAAAGGAAACCGATNGATGTGTTTGCCGTCTGCCT
GAGCGCACGCGATACGAAGTAGAAACTGGGGACTAATATTCAGGGGCTAA
TAATGGAGGCGTTTTGCCCCTNAGGGGAATTGGTCTGGTTAANCTGTGCA
TTCACTGAACGCCTCGTGCAAACCTTTTGAAGGCGTGATAAATTGAACCC
TGAAGTTCTAGAACATAGAAATCTTTTGATTTCCATTTTAGTTGGAAATC
TTCTCNCTGATATAAAGAAGCAAATTAAAGAAAATGTAGTTGGATGGGCA
GATCAGCCTTTTGATATCATTTAGGCGGCAGCCCAGTTCTTTGGGAAATT
GAAAGCAACCGTCTTTGTCTCGCAAATCTCTACAAAATCAGAAATGTAAA
AC
>rnd-6_family-5901#LTR/ERV1 ( Recon Family Size = 32, Final Multiple Alignment Size = 27 )
GAAACAGNACCAGCTTAAACTGGTTTTGCCTCCTTAAATAGGTTGATTAA
TCAAACCTCGAGTTATTTTACAGAGACAGCACTGCGCATGTGCAAGACGG
GAACCCACGTCTCCAGGATGACCCCGGAACCAAGAATCTTCAGTCTACGG
AACTCAAAGAATAGAAATGTTGCCACCGGAGCCCTTTACGAAGCGAGAAG
TCCTTCAGTAAGGAAAATCCGGCTTCCAGCAGCACGAGTAGCTTATATGG
ACTGATTCGAGACTAGCCAATCAGCTTCCAAGTTTGAAATTCCCCTAACC
CCTTAAATTTCGCCCCGAACCCCGGATCGGGAGACAGATTTGAGAGCCCT
GCCTCCTGTCTCCTTGCCGGTCGACCTCGCAATAAAGCTCTTTCTTTTCT
CAAAAGCCGGTGCCATAGTATTGGCTTCTATGCGCGTCGGGCAGCGAGCC
CTTGCTCGGTAG
>rnd-6_family-371#Satellite ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
GGCAAGGCAGGAGGTGTCAGAGACCCAGAGGTTGGCCCCCGGCTCCCCCT
GGNCCCAGGAGTCCGGACCCCCAGCCCCTCCTCTCCCAGGACCCAGGAGT
CCAGGCCCCCAGCCCCCTCCTCCCTCAGGACCCAGGAGTCCGGGCCCCAG
CCCCCTCCTCCCCAGGACCCAGGAGTCCGGGCCCCCAGCCCCTCCTCCCC
CAGGACCCAGGAGTCGGGCCCCCAGCCCCCTCCTCCCTCAGACCCAGAGT
CCAGGCCCCCAGCCCCCTCTTCCTCCGGGACCCAGGAGTCAGGCCCTNCC
CCCCAGNCCCCCCGTCCCTNAGACNCTNGAGTCCGGGCCCCACAGTCCCC
CGCCTCTCTGA
>rnd-6_family-1230#LINE/L1 ( Recon Family Size = 63, Final Multiple Alignment Size = 27 )
AAGGATAATGGCGGCCGCCTGAATCCGAATCTCTCCACACATCCTCCCCA
AAANCCATAAAATCAACAAGGAGNGCAAATAAAACCACACACGACCCACG
CCTTCAGCATCACTAGGAGACAGAGAATACCACGAACTTCAAATTACCTG
TAAGTAGAGAAATAAACACCAAATTCCAACAGAGCTCCCGCTGCCATTGC
TGGTAGGAGAGTAGAGGCTTAAGAGACTCCGTGAAAAAGGAAGAGGAGAA
GAGGGCATAGACGAAGCACAGACAAAATCACTCCCAGAAAGAGAAAGTCC
AACACTAAGTGCCAAAATACTGAACACAGGTCTGGGACTTGGTAGTTCAC
AGCACCAGCTANAGGGAAGGGGCTTGAAAGTGAGTAGGACCGGAAGTGGC
AGCCTCGGAGAAGCATGCTTCTAGGGGAGAATCAGATAAATAGAGAAGAG
ATGGTGCCCTTGGAGGCGTGGCAGTGAAGGGAAAGGAAGTAAGAGAGGAA
AATTAAGGATCCTGCAGAAATGAAAGAGAAATAAGACACGCCAATCCCTT
CATTCCCCTCAACGTCATCCATAAAGAAACTGCAGAAGAGGGCACTCTTG
AACTAGGAACTCTGTCCACAAAATGCCTAGGAATAGAAAAAATAAAAAAT
AAATCAAANCAANTCCANATAAGACCAGTAGCTGATGAAAATTCTCCCCC
AGCAAACANCCGCAAAACGGAAGAAACTGATAACACACGCTCCAAACTGA
ATTAAATATCCTCAAACAAGCATTTGGAGATATGAAAAACACTCTGAATC
AGAAATTCAAAANCTAAGAACAAAAATGGACAAAACAGAAAGCAGTGAGA
AGAAATGCAACGAGAGTTGATNAAACTCAGGAAAGAAATAGAAGAAAAAG
NCAAAACNATCTCAGAAATAAAGANTAAATTACAAGGTGCCCAAGGGAGA
ACAGATTCAAATAAAAATTTAATAAGGGACANTGAAGAAAGGAGAAAACA
ACGAAACTAACNAAAGNAATAAAAATGAAAGAAGTAAAAAGGGTCAGAGA
AAGTGGTTGAAATGGAAGACAGGCAAAGAAGGTTCAATATACATG
>rnd-6_family-2691#SINE/MIR ( Recon Family Size = 32, Final Multiple Alignment Size = 27 )
AGAAGACNTAACAACTGTACATCAACAACCCCATGAAAATNGAAGCTAGG
CCCGCTTTCTTAGTGTAGCGGAAAGAGCACTGNACTAGAATCNAGAGACC
CGGATTCTAATCCCGGCTCTGCCACTACGTAGTTCATGTAATCCTGGACG
AGTTATTTTGACATCTCGGCCATTGTTTTTCTTATCAGTGATACTTATTT
AACCTTTGGGGTCATGGACCCCTCTGAGAATCTGATGAAGCTATGGACCC
TCTTCCCAGGGAAGTGCACATNAACACAGAGCTTTGCACAGAATTTCAAG
GTTTNTGGGCTCTCCACGATAGCCCACCTAGGACTCCTGTGTAAGTGAAC
CCCAGGTCAGGAACTCNTGGACGGGAGAATAGCTACAGCCTCTTCCAGCT
CTAGTGGGCTCAGCTTTGTGAATCCGCGAGCAGGAGACGNTGCTNAGGAA
CTTATCTGAGAAAAACAGAGGAAGAAGGAAGAAGAGGAGCAAAAGGAAAG
GAAAATAGAAAAAAGAGGAAAAAGAGAAGTTCTGTTTCCTAGTAACTCAA
AAAATATCTNAGAATCCANTTNTTAGATGAACACTTACATGAATTAAATG
CAATATAATTAAATTTCATGTTANAAAGGAAAATGTAATGTAACATGTTA
ACTCATTTTAAAGTTATANCCTCTTGGGAACAATAAGATAACTCNCAGTG
AATAAAATAAAGAAAGGAAAATGGAAGCAAAAAGCATTTACTGTAACTAA
ACGATTATCTCAAAATGTGATTAAATACTTCGAATTCTANGATAACTGAA
AT
>rnd-6_family-6724#DNA/TcMar-Tigger ( Recon Family Size = 27, Final Multiple Alignment Size = 27 )
TGGGATCCCCAACCATCGACATCGTCTGCTCCTGACATCCAACCATCGAC
ATCGTCATGGCTCGATGATCCAGGATCACCCGAAGCAGATGATCCTCCTT
CTGACGTATCGTCAGAAGGTCAGTAGCCTAACGCTACGTCACAATGCCTA
CGTCATTCACCTCACTTCATCTCATCACATAGGCATTTTATCATCTCACA
TCATCACAAGAAGAAGGGTGAGTACAGTACAATAAGATATTTT
>rnd-6_family-1451#SINE/MIR ( Recon Family Size = 29, Final Multiple Alignment Size = 26 )
AGAGCATAGNAGTTAAAAGANCACTGACTTTGGAGTCAGACAGACCTGGG
TTTGAATCCCGGCTCTGCCACTTACTAGCTATGTGACCTTGAGCAAGTTN
CTTAATCTCTCTAAAATGGGGATAATNCCTACAATTCCGGAGTGNCGNGG
TGAGGANTAAATNAGACNATTGTGAGAATTAGAGTCCA
>rnd-6_family-648#DNA/hAT-Charlie ( Recon Family Size = 30, Final Multiple Alignment Size = 26 )
GAGTGGGAAAATGAAAAATAGACNAAGAGAGCCATGTGTTTCAAGAAAAA
TGTGAGAGAGCGTNTTTCTTTGTGGAAGTGAAGAATATTCCTACGTGTTT
AANATGCAAAGTGTGTCTGTGTCGAAAGAATACGACTTAAGACGCCGTTA
TGAAACNAACNATNATAAGAACTATGACGGNACNTGGAAAAGATGCGTGA
TGGAAAATTAACGAACTGAAAGAAAAGACTGAAATTTCAACAGGTTGCTT
TTGAATGCGAATAAAATAAGTGATGCTGCCGTGAAATGCAGTATGTATTA
AGTGAAAAAATTGCTCGGGCANCAAAACNTTTTGCAGATGGCAAGTTTGT
AAAAGNATATCTATCGAGCACAGCGGAAATTACGTGCCCTAAACAGANAT
AGCNTTTGCAAATNTAAGNCTNACCAGNAATACTGTTGCTCGGCATGTTG
AAAATATGACTGAGAACTTACAGGACAAGTTGTATGAAAAAGCTGAATNA
TTTGTGGCATTTTCCTATTGCAGCTCAGGAAGGTGTNGATGTAAATAACA
CCCCACGTAGCTATATTTATTCATGGTGTCANTGAGAATTTTGATGTGAC
TAAAGAACTTCCGGANATGGTNCCCATATCAGGCACNACATTAGGAAATG
GTTTTACGTGTTGAGAAAAGTCTTAAACGAGTTTAATGTAGACTGGTCAA
AGTTGGTAAGTATGANTACAGACGGTGACTCTGCGACGGTCAGTGTTANA
GAACTAGTTACGAAACCGAAATTAATGCGACATGTTTTGCCAAGACACGG
AACTTAAGTCNATTCATCNCATTCCGCCGGGAACCACTTTGTGCTAAAAG
NTTAAAAATGGAACACGTCATGGACGTAGTTTATACCATAANCTGGATAC
GTTCCTATGGCTTGGACCTTACAGANAGGTCGGTGCTNTGTTTGATCGGT
TNGACGCACNATATGGGAACATGTTCTGCTNTATGGAACCGGAGTGGCTG
GATNGCGNTGTAGTCCTNAGGCAGNTTTTTGAACTGTTGAAAGAAATTNA
CTTTTTNACGTNATCTAGAAGAAAATTGANCCTCGGCTTATAGCGGAGAC
TGGANCAGAGACTTGGCCTTNTTTTGGTCGACATGTTATAACCTNTCTAA
ACANTCTGGATATTTCTCTGCAAAGGCGTTCGCAANTGTGACACAAATAT
ATGATTCGATTNGTTCATTCNTAGCGAAATTGTGTCTTTGGNAAACTCAT
TTGGCAAGGANTAATCTGGCTCACTTTCCTACGCTGAAACTGGTTTCCGG
AAATGAAAATGACGGCCTGAACTACATTCCCCAAATTGTAGGGTTGAAGA
CTGAATTCCAAAAAACTTCTCTGATTTTCAAACTTTATGANAATGAANTA
ACGTTGTTCAGTTCGCCTTTCTCAATTAATATCGATAATGTGAATAAAGA
GCTACAAATGGAAGTTACTGAACTGCGGNTCGACACTGTACCGAAAACTA
AATATGACGATGTTGGAATACCNGAATTCTACGGATATCTCGGAATAGTC
GCCCTAAATATAAAAACCATTATGCAAAGATTTTATCCGTGTTTGGAAGN
ATTTACGTTTNTGAGCANCTGTTTTCCGCTATGAAANTGAATAAAACNAA
ATGTTACTTCTAGTTAAAGGATTCAAAGNTGAATTCTNTACTGCACTTGC
AACACAAGCCGCAANCATGCTGACTGATATCTCATAGNAAAGGAATGCCC
AGATTTCGATTTCAAATCCGAGGAGTAACAATTACGAAACCGAATAATAC
TTATATTTTCGAATCACATTTTTTCAATGCAAATTTAAAATACAATCTCC
GGTATTATATGTTTGTATTATAAAGCAATACAAAATAAAGTTTGACTNTA
TTCTGG
>rnd-6_family-16#LINE/L1 ( Recon Family Size = 33, Final Multiple Alignment Size = 26 )
AGTGAAATAACACACAGTATTTNTCTTTCTCTCATGACTTCACCTATATG
TGGAACCTANAAAACAAAGAAACAAGTGAACAAACAAAACAGAAACAAAC
TCATAGATACAGAGAACAGANTAGTGGTTACCAGAGGGGAGAGGCGGGGG
AGGCGAAGNGGGTAAAGGGTACAAANTNCCAGTTATATAAAATAAGTTCT
GAGGATNTANTGCACAACATNGTGAATATAGTTAACGATACTGTAGCACT
TAAATGGTGATGATGGTAACTTTAAACGGATTATAATGTATATAAATATC
GAATCGTTATGTTGTACACCTNAAACTAATATTGTACGTCAACTATACCT
CAATAAAAAAAGGAAAAGAAGTTGAAGAAGACANAAATAAATGGAGAGAC
ATCCGTATAGCTCACAGCTTGGAAGACANTAATACCAGTTAAAATGTTCA
TACTGCCCAAAGTGATCTGTAGNTCCAACGTAATCCCTACCAANATCCCA
ACGGCATTATTTTCANGGAANTGGGNAAGACAATTCTGAAATTCATGGGA
ACTTCAAAAGAATTTAATAGCCAAAGCGATNCTGGGACAGAACAAGGCGG
AGGTATCCACTCGATGATTTCGAACTTTATTATAAAGCTATAGTAATCAA
AATAGTGTGGTATTGCATAGAAACAGACACATGGACCAACGAAACAGAAT
TGAGAACCTAGAGATAGAATCACGCATATACAGTTAACTAGTATTTAACC
AGGGAAGCTAAGACTATTCAATGGGGAAAGAATAGTCTCCTCAATAAATG
GTGTTGAGAAAACTAGATAATTCCATGCAAAAGAATGGAACTGGATCCCT
ATCTTACACCAGTCACAAAAGTTAACTCAAAATGCATTAAAGACATAAAT
ATGAAGCCATAAAACTCCNNGAAGAAGGCACANGGGAAAANCTCCNTGAC
ATTGGTCTTGGCAATGATATATTCATGGATATGACACCGGAAGCGCAGGC
AACGGAAGCNAAAATAGACAAATAGGACTACATCAAACTAAAAGCCTTCT
GCACGGCAAAGGAAACANTCAGCAGAATGAAAANGCGACCCACAGAATGG
GAGAAAATATTTGCAAACCACACGTCTGATAAGGGGTCGATATCCAAAAT
ATACAAAGAACTCTTANAACTCAACAGCAAAAAAATGAACAACCCGATTT
AAAAATGGGCAAAGGACCTGAACAGACGTTTCAAAGAAGACACACAAATG
GCCAACAAGTATACGAAAATGTGCTCAGCNTCGGTAATCATCAGGGAAAT
GCAAATCAAAGCCACAATGACATATCAGCCTCACACCTGTTAGAACGGCC
ATTATCCAAGAGATAACAAGTGTCGGCGAGGATGTAGAGGAAAAGGAGCC
CTCATGCGCTGTTGGTGGGAATGTAAANTGGTGCAGCCACTACGGAAAAC
AGTATGGANGTTCCTCAAAAAATTAAAAATAGAACTANCATATGATCCAG
CAATTCCACTTCTGGGTATTTATCCGAAAGAAATAAAAACACTATCTCAA
AAAGATATCTGCACNCCCATGTTCATTGCAGCATTATTCACAATAGCCAA
AACGTGGAAGCAACCTAAGTGTCCGTCGGTAGATGAATGGATAAAGAAAA
TGTGGTATACACGCAATGGAATATTATTCAACCACGAAAAAGAAGGAAAT
CCTGCCGTGCGANAACATAGATGAACCTCGAGGGCATTACGCTAAGTGAA
ATAAGCCAGCAGAGAAAGACAAATACTGTATGATCNCACTTATATGNGGA
ATCTAGAAAAATCAAACTCATAGANACAGAGAGCAGANCGGTGGTTGCCA
GGGGCGGGGGGGGTGGGGGNTGGGGAGANGCTGNTCAAAGGGTACAAACT
TTCAGTA
>rnd-6_family-5899#DNA/hAT-Charlie ( Recon Family Size = 26, Final Multiple Alignment Size = 26 )
AATGGGCTTCAGGGGATTCGTGAGCCCCCTGAAATTGTATGCAAAATTNT
GTACGTATATGTGCATTTTTCTGGGGAGAGGGTCCATAGCTTTCATCAGA
TTCTCCAAAGGTCCGTGACCCAGAAAAAGATAAGAACCACAGAATTAATT
TGAG
>rnd-6_family-8195#DNA/hAT-Charlie ( Recon Family Size = 28, Final Multiple Alignment Size = 26 )
TGGCAAACTATAGCCCACGGGCCAAATCCGGCCCGCTGCCTGTTTTTGTA
AATAAAGTTTTATTGGAACACAGCCACGCCCATTCGTTTACGTATTGTCT
ATGGCTGCTTTCTGCGCTACAACGGCAGAGCTGAGTAGTTGCGACAGACC
GTATGGCCCGCAAAGCCTAAAATATTTACTATCTGGCCCTTTGCCAACCC
CTGNTCTAA
>rnd-6_family-280#DNA/PiggyBac ( Recon Family Size = 32, Final Multiple Alignment Size = 26 )
AATTACCATATGGGTCCANTGGACCCTTTCATAAATCTAAGATACATTAT
GGGATCTTAGTGATCTTATTTTTCCCGTATCTTGAAACATTTTGCTTTTT
CAATTACTTACTCATCAATTATTCCCAACTATGCTTTAAAAAAGACTAAA
ATAATAAAATGGAAGAATGATGGAATCGCCTAGAAGGATGATGCAATAGT
GAGATAAATCATCACTANTACATCATCCTTCAGTTTTCTTACTGCGCTGC
CCAAAGTATTGCATCATCTTTCAAGAAGGTATAAAGAAGACTGGAGACAC
CGTCTTTGTAGTCTGTTTAGCTTTCATTGAACACAGTTGAGAATTCAGAA
TTTTTCATTTTCTGCCCATAATGGCAAAGAGAAGAAAATTGACAGAGGAA
GACGTTTCACAATTATTAGACGAATCAGAAGATGAATGCAAAGACAGATA
GCAGCACTCTAGACTCTAATGATGATGGTGAAATTGATCATATAAGCGAA
ATCTCAGACTATGAGTCTTCAGATGACAATATCCTAGATGAATTTTCTCA
AACTCAAGAATCGATGAGTGAACAATATATTTCTAAGGACAAAAAGGAAA
TATGGTATTCTCATCCAGTTCAACAGGAAGGACTTCATCACGCAGTATTT
TGCGACAAGAACCTGGACCATCCCGTTTTGCTAAAAGGACGTGTGACAGT
ATTCTTTCATCTTTTATGATGTTTGTGCACCAAAATTTACTTGATACAGT
TCATAAGTGGACAAATGCTGAAGGCAGGTATATATACAAAGGTGACTGGA
AGGAAATAGATGATGTAGAAATGAAAAGATCATCTTTTGAACATAATTGT
GTATTATCAAAGGATTTCTAAAAAAAATNTTTAAATATTGCGTTTTGACG
ATGCAAGTGCGAGAAGAACCAGAAGTAATGATAAGCTAGAACCTATTAGA
GATGTATTTGAAATCTGGAATCAGTATTTACAAGATGGATATGTTCCAGG
TTCATGCATGACATGAGCAGTTGAGTTGCATTCAAAGGGCTCATTTCGTG
GTATATACTTTCAAAACCAGGAAAATATGGAATAAAAATT
>rnd-6_family-762#LINE/L2 ( Recon Family Size = 32, Final Multiple Alignment Size = 26 )
TGGCTGGGAGGAGGGGNAGGTTCCTCCCCTGAAATGCCCCTCCCTCTACC
TGTTGAAGTTCTNCTCATCCTTCAAGGCCCAGCTCAAGTGCCACCTCCTC
CGTGAAGCCTTCCCCGATCTCCCAGNCGGAATTGCTCCCTCCTCTGCACT
CCCAAAGCCCATTTGGCATTGAGAACATGACTTCTATATGGCTNTGCATG
TGTCATGTCTGTCTCTTCCAGTAGACTGTGAGCTTCTTGAGAGCAGAAAT
CTT
>rnd-6_family-3661#LINE/L1 ( Recon Family Size = 28, Final Multiple Alignment Size = 26 )
GTTTNACCGGTATGGGGCTGGCCTGGAAAAACCAGCAGCTTCGCTGCCAG
AGGGGGCTGACTCGATTTGGGGCGGAGGCGAAAACCCGCAGGTATGTCAG
CTAAAANTTGGGTAGGAAACGAACGGGGAAAACCTACAGCTCTGCTAGCC
TGAGGTTGCGGTCCCGGTTGGGGCGAGCAGCGGACCAGCCAGAAATTTAA
CAGGGAGACCCTGGAAATGAGAGAGCACAGAAGGGCTAGATAAGCTCCTA
CATCCCTGGCTGACTGGGAAACTATGCGTATGCGCAGGGGACCGTGGATG
AAAGTAAAACAAGCCGAGGCAGACTTGAAAACTGGCTGAACTTTGAATGC
ACTCCCCANCCCACACACAGATCGAAGCCTTACGGGCTCGAGGNGTTTGA
GCACAACCTCTGCCCAAATCACTGGCTGACCACTGAGCTATGCAGACACA
GGGGTGACCCCTAGGAAGCCAGGCCAAAAAATAAAAATAAGAACTGAGAC
TTGAGAAACTAGCAGCCGCACACCGCAGGGAGACAGATTCCACGGNTTAA
GTCCAGGCAAGT
>rnd-6_family-2343#SINE/MIR ( Recon Family Size = 35, Final Multiple Alignment Size = 26 )
CATCCAGGTTCAAATCTAGGCTCCACTACTCGTTTGCTGTGTGACCTTGG
GCAAGTTCTTTNACCTCCCTGAGCCTCAGTTTCCCCATCTGTANAATGGG
AACAATACTTGTACTGACCTCATAGGGTTGCGTGAGAATTAAGTGAGATC
GTTTGTGAAGATTTTGGCAGAGCATNTGGCATGTGGNAAGCTCT
>rnd-6_family-6932#LTR/ERV1 ( Recon Family Size = 27, Final Multiple Alignment Size = 26 )
TCCTCCTCCCTTTGTCTTTACTCTTTAAAATTAAATCCCTCTCNCCAGGN
GGGCGAGAAGTTGATCTGCGAACTNAGTTCCCGCTTCTCCATTCTTTGGC
CACTGAATAAAGCTTGTGCTGTNTCGGTCTCAGCNTCGGTTTCGTTATTT
GGCTGCGCGAACCCGAACGGAAAAAAGAAACCTCCCCCGCCGAGGCAGAG
AGCCTCGGCCGGGCTAGGGCCCGAGCAGGGTCCANACGACTTAATTCGGT
AACAG
>rnd-6_family-1123#DNA/hAT-Charlie ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
GGCCCGCCGTCCCCACGACTGTCGCGGCTTCGGCCGCCGGGGCCCCTCCA
GAGCCGGCAGCCTCAGTGAGGCCGCCCTCCCCTCGGGCTCCGGGGCAGTT
CCGTGACGGCGGAGGGAAGAGACCCCGAGCCGGGAGTTCCAGCTCTGCGG
AAACGCGGGCTCCGTTCTGGGCGCAGGGGGTGGGACCGCTCTGCCCCGAG
GCCTTCCGGGAGGGAGGGGGGCGCCGGGGGAGGGAGCCGCCAGGAGCGCA
GGGCCCCAACGGGGGTCCTGGAGGGGCGGCCCGGCCTGGGGGGCCCCGCC
CACTGTGACCGCAGCCCAGGCCTTTTTCCTGGAATCCTACACAAAAAAGT
TAGAAAGATACACGGTCTATAGTAAATATTCACAAATGATTGTTGCTGCT
GTGCTTACTATCCTATTAAACGTGTAAAATCCATAAAACACTTTAAGTTC
AAAGTTAANTATGAATTTTTACCTTTCTNATTATGTCTCTGCTATTCACA
ATTGTGGTTAATGAATCAGAGACTGTGGCATCACTAGTTAAAAATGAGCT
TGTTAAAAAAAATGGAACTCAGGCCCACCGGACCTACTGAATCANAATCT
GCACTTTTACAATCTCCCCAGTGTACTTGTGTACCCATGAATAGTTGAAA
GGTACATTTCTACCTCGACATGTCTTTTCCGTCTGAGAAATACACACATT
TTATCCAGTTTGATATAAATAAAACACTCAAAAATGCATATGCCTGTGTT
GAAACCATCATTTTATCATTTCTTTTCCAGATAAGTATAGTCTCTATACT
GGTTTTGTGGATCACATGCCACACTTTTCTTGTAGTTAGAAATAAGGTAG
AGAAAGTTACTTTGTA
>rnd-6_family-839#DNA/hAT-Blackjack ( Recon Family Size = 30, Final Multiple Alignment Size = 25 )
TGGGATNGGGCATGGTGGAGAAGGGGATGTGAAAGCACATATGGAGACGG
AATCTCACAAGTCCGGGATGAGACAGGCAAGTGCTTCTAAATCAATCATA
TNTTTCTGTTTCTAAATGAAAAAAATTGTCTCCCCAAAGACACCAATGCT
CAANTAAAAATAGCGGCCGCTGAATTAGCTTGGGCGTACCACACGAACGA
ACACGCATTATCGTNTCGTTCCCTTGATTGCTCTATGAAACTGAGTAAAG
TTACATTTCCTGATTCAGAGGTTGCGACTAAAATGCCCTGCGGGCAAANA
AAAAGAGNAATTTTGATAAGATGTGTTGGCCCCTTACGGTGTAGNGCTGA
TTCTGTCAGCATTTTACCAAGTNAATGTGGCAGCAAAAATGTTCCCCCCA
GCTNTTAGGTANTTTGATTTGAAAAATGGAGTTTCAGATCGTCTTCTGAT
TTCTATGAGGGTTTTAATGAAACCNCATAAAACAAAAAGATTGTTGATAT
CTTGTCCAAATACAAACTAGACTTTGCTCATCTATCTGCNTATTCGGCAG
ACAGCGCAAATGTAAATTTTTGCAAATTCCATTCAGTCTATAAACTTCTT
ACCAAAGAAAATGAAANGATCTCACCTGNTAAATGTCCTGCACGCCTCGT
ACACAGCACCAAAAGGGGTGTGATTTGTTTACCTGCGATAAGGCTTTCAT
AATGNAAGTGTTTGGTCGCTCTTCAGCTTCCTCAAAACGTGCAGAAGCAT
TTAACGAGAATTTTTTTTTTGACTTTATAGAAATGGAAGGAGATAGCTTC
CTTAAACATGCGCCTACAAGACGGCCGTCGTCGTTNCCGGCCATAGAAGA
GACGTTAAAATATTGGCCTGCCGTAAAATCNTATTTTCAAAGTGCGGACA
GGAAGAATGTCCTTCTCTAATTTGGAAATACATTGAGGATGAGAATGGAG
AAAAGAGTGTACAGTAAAACAGAAATTTATATGCTGTTTCTCCAAAACCG
TTTGATGATCTTTGAAGAGGCCATAAGAAGCCTAGAAAAGGATGAACCGA
CTGCACCTGAGTTGTTCGGTGATTTGTGCAGGTTGTGACAAAAACTCATA
CGGCGAAAAAACGACTCATATTTTTGGAAATAAGACTGCTTCAGAACTCA
AAAAAAAGTCACCAGAAAAGGGTAGCCAAGTTAAACAGGACTTTCTTAAT
TTCTTTACTAAAACCGTAATTTATTTGGAATCCAACTTCGATTTCACAAG
TTCAAATTACCTCTGTGCTTTAAAACCATTTTCCCTGAGAAAGAGAGGTT
TAACTTACGATGACATCCAATGTGCTTCGGAATGTTTAAAAACGATGGGC
ATTTTAGACATGGACAGCCTATATGATGAATTTATANATGCAAAGGACCT
GACTGACAAACAGTTGGCTTACCAAAACAAGCCTGTAGATACAAAGTGGA
TGGACGTTTTGGAGAGCCGGAAAATAATATTTCCAAGTCTAAAAACCTGC
TGTTTCTAGTAAGTAAAATCCTAANTATTCCATGCTCAAACGCTTTTGTT
GAGAGGATATTTAGCTTGATGTCATCACACTGGACTGACACCAGGAATCA
GTGTAATGCGGGCTTGATAAGAGCAGAGCTGCAAGTCAAAATGAATTTTA
CGTTTGACTGTATTCGGTTTTACCACTACATAAAAGAAGAATGTCCTANA
GGCTGCAGGCAGTTCAGAGAAGTATTATTGGAAAAGGAAACAGAAAGAGT
AAAAATATCCTACTGTATCATGGNACAGAAAGAAACATGTCATGTTATTT
TTTTAATTAAATATGGGTAATATCTGTTTAATTAGTCCTATTGTATTTAT
ATTTTCCTTTTTAAAAGTCTTACGTTTATGTATCTTAAGAATACACAATA
ATATAGCCTGCAAAATTTAAATATCCAATAAAGAGTTTAAAAAGAGTTAA
AATAAATTGCTGTGTCAGAGGACAGAAACATAAAAACATTGTTATTTTTC
TCACACATTATTTTTTAATTAGTCCTACTATTAATTACTACTAATCGCCA
CTGTTAACTAGTCCTATTGCTGTTTTATTTAAATAATAGCATTTATGTAA
CAGAAAAGTAAATAATACAGAATAATATACAATTTCAAATAACACCTATT
TTTCATATTTTTATGTTAAAGTAATAACACGTGTGTAGTTATATTTATTA
TATATTATGTGTNTTTTTTGGTCTGGCATCTGGTACGGCTGTGTCCTGGG
TTGGCTCTCTAAAAAGTTGNTCACCCTAGGNATGCTCCCCCCANCAATAG
TGGAANAGGCTACACGTAAGTCCGNCCAGG
>rnd-6_family-4219#SINE/MIR ( Recon Family Size = 27, Final Multiple Alignment Size = 25 )
AACGTCCAGATTTCCGCAAACCCTTCACTCTAGTTCTGGAAGACGAGNCC
ATGGTGGGGTCAGGCAGACCTGGGCTTGGATCCCAACCCTGCTACTTACC
AGCTGTGTGACTTTGGACCAGTTNCTTAACCTCTCTGAGCCTCAGTNTCC
TCATCTGTAAAATGATAATCCCCGTCTTANTGGATTGCTAAGAGGGTTAA
GTGAAGACATANAGCNCCTAGCANAGCACGGCCGGCCCACCGTAAGTACC
T
>rnd-6_family-9#SINE/MIR ( Recon Family Size = 29, Final Multiple Alignment Size = 25 )
ATACGGCACAGTGNCNTAAGCATACAGATTCTAGAGGCCAGTCGCCTAGT
NAAATCCTGGCTCGGCCGCTTTTTTGCGATCTTTCTTGGNCGAGTTACTC
CACGGTCTCAGTTTCCTCATCTGTAAAATGGGGACAATAATAGNACCTAT
NTCANAGGGCTGTTGTGAGGATTAAATGAGTTAGTGCACATGAAGCGCTT
AGAANAGTGCCTGGTGCATCGTATGG
>rnd-6_family-6670#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
ATTTGCCTTTGAGATCTTTTGTNACTTTGGTTAAGTGAATAAGTATTGTT
TCACAGTGACCTATGATCCTATTTGACCAAGTGTTTTAAA
>rnd-6_family-1372#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
TCTTTACTGCGCTCCTCCTCATTAGGGAGGACGCCCACACCCTTTCTCTC
CGGGTGTGTATCTCTGCCTTGCTTCTGTCTTAAATAAACAAACTGTTTCT
CTGTGTGCTCTCCCACTTGTTGTTGTGCTGTGTCTCTAATAATAAACTTT
GTACCTGTTTTTACAGTTTTTGCCTCCGTGAGAAATGCATTTTTCACTGG
GGGCAAGAGCCAGGGGAATTGCTTCTAGCCTCTAGCCCCTGGTGGCTAGG
ATTCCTGGTTTTCATCCAGGCTACCCAGGTTCAATTCCTGGGCAGGGAAC
TAAGATCTCGCTTCACGCCACCGCTCACTGCTGCCTCTCCGAGATC
>rnd-6_family-18#DNA/hAT-Charlie ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
TAGNACAGTGGTTCTCAACCGGGGGCGATTTTGCCCCCCGGGGGACATTT
GGCAATGTCTGGAGACATTTTTGGTTGTCACGACTGGAGGNTGCTACTGG
CATCTAGTGGGTAGGGGCCAGGGATGCTGCTAAACATCCTGCAATGCANG
GGACAGTCCCCCACAAAGAATTAATCCGGTCCAAAATGTCAACAGGTTGG
GAAA
>rnd-6_family-3525#LINE/L2 ( Recon Family Size = 39, Final Multiple Alignment Size = 25 )
TTGCTCTTCCTCAAACACGCCAGGCACACTCCNGCCAGGGCTTTGCATTG
CTGTCCTTCTGCCCGGAACGCTCTTCCCCTAGATNTTCGCATGGCTGGCT
CCTCTTCCTTCAGGNTTCATTCAAATGTCACCTCCTCAGAGAGGCCTTCC
CAGACCACCTATCTAACATTATAACACACACACATGCACGTGTGCGCACA
CACACACGCATACACATA
>rnd-6_family-5460#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
TATTTCTTAANTAGCTCAACGCTATTGTAAGAGCATCGTGGGAAGAACTG
TCAAATCAGAAGAGATGCTCAGCCTTCCCTAGGTTAANTTTGTANAGGTA
AAATATTATTAATATAAATATTTCAGANATTGCGTGCTTTACGGGAAGGC
CCTGGAGATTTGTCAATGCCCTCGCTGTCCATAATATGTTCTTACCCTCA
GGGGAAACATTGACCAAACCCTTATGAAATAGTTACGTATTGTACCCCAA
TAGAGAATTTTACTCTCCTCCATTCTGATATTATTGGTTACTGTAATAAA
TTAACCACAGCCATTCAGTCTCGTTATCAAACAGGTTTCTGCTTTCCCCT
GATGCTTGCCTGAAGGCTCTGCTATAAGCTACAGGCCAGAGTTTGTGTCT
TCAACAAAGAAGGACAGTCTCAGAGCCTTGTGGAAAGGACTGTACCAGGT
ACTCTGAACTATTGATACTTCAAATCTTGGGTACAGGCTTCCGAGCTGAC
ACTTAGACAACTTTCAGACCGTACCAGTGGATCAGGATTTCCAGGACTCT
TTTTAGTCCGGAAGCAGACGGCTNACTCAAGATCCAGCAGAACAAGAATT
AATTACATAGGACTGAATGAACTGATGAGGGAAATTTAATTGTGGTTATT
TGTTTGGAATATAGTTGA
>rnd-6_family-2933#Unknown ( Recon Family Size = 25, Final Multiple Alignment Size = 25 )
CCTCCCCTTTTTTTTTCTTTTCCCTCCTCCTCTTTTTTACTATTGTGGTA
CTGATGTACCTTCCGGTTGTTGATTCATCTATATTTTTATTTTTATATTC
TTTCTAACATATCTGTTAGTTTCCTAGTCTAATTTTATTTTTTACTTTGT
TATTGTTCTT
>rnd-6_family-2877#Unknown ( Recon Family Size = 31, Final Multiple Alignment Size = 25 )
TATTAGGTTTGTGTGTCCACCTGAAGACAAAGTATACATGTATATATGTA
TATATGTACACACACACACACACATAATGTGTNTATATTTGGCAACCA
>rnd-6_family-1377#LTR/ERV1 ( Recon Family Size = 26, Final Multiple Alignment Size = 25 )
AACTACAAGGCTTGCAGGCCTGCGGGGTGCAGCCCAACAACTGGCGAGCC
AGCCAGGAGGCCGAGGAAACTCCCGTGAGCGCCGAGATGTCGGGAAATAA
GGACGGGGAACGGAAAGTTGCGGGGGTGATCCNGAGGTGGCCGTCCACTA
GCATGTGGGGCCCTGTGGCAGCTGACTACCATGAGAGATGTCTTTCTCTT
CCATTATATTGACGATATCCTGTCAGCCCCGCGCTCGTGGCTCATCTGAC
TGCACGGGGATGGCTGGTGAATACAGACAAAACGCAAGGACCTGGATTAT
CTACAAAANACAAGCATACCCCCGACCCACCACCCCTAAACAATTACAGA
CACAGGCTTTAGGGATATTAACTCAGGGACAGGCTTGTGAATTGGACGTG
GCCAGTTACCCGGAAGGGTTTGGTTGGGGCCTGTGGCAACGGCAAAATAA
TAAGAGTACCCTTGGGCTTCTGGTCCCAGCTATGGAAGGGGGCAGAGCAA
CGATACAGTGTGATGGAACAGCAGCTATATGCAGTCTACAGTGCGTTACA
ACAGGTGGAAGACGTTACAAAAGGCCTACCCGAGTCGTCGAGCAATGCAA
AAAACCACTATTCGGGGTCTAGAACAGCTGTGCGCGACATACGGGACCCC
CGTGGACATCGATAGCGACCAAGGAATCCACTTTACCGGCCATGAAGTTC
AGGAATGGGCCGATAAAAATGACATACACTGGCATTTCCACCTGCCTTAC
GACCCCACTGCTGCCGGGCTAATCGAAAGGATGAATGGACTACTTAACAA
CAATTGAGACGGGAAACCCGTCTCTCAACGCGTGGACCAGGAGGCTAACT
CAAGCCCTACGAGCTATAACTGAACATCCCAGTGCCTACGCCATGTTAAC
CCAGAGGCAACTAGTCAACACCATCCGAGTTCAACTGTTGACCACCGAAG
GACCGTTGCCAACTATCGGTCAGGACAATAACTCACTTTTGCCCTTGCCA
CAGGATCTACCCCCAGGGGAACACACTATGAAATGGCCCTGGGACTGGCA
GGTAAGTCCCCGGTGGTTTGGGTTTGCCGCCCCGTGGGGAATAGGATTAG
AAAGGGANTTACNGATTTCACCTGTCTTCTACCCGGCCCCACCTAAGACT
ACTAAGGTAATTAATCCGGGCCCCTACTGGAGAAAGGCGCCATTATATTA
ACCCTGTGGTCTGTTGTTACACCGCCTCTCCAGTATTCGGCACCGGCTGT
GGGGACTGAGGGCGGACAGGCGGNATGGTNCTGCAGGCCAGGACAAAAAC
ACAGGCAGGGGTGGCGTTATCTCAGAATGCTGTTACTGCTTGTATTTCGC
TTAATGGTCATGATCTTCCCGTATTGTGCCTGTTAAACATCTTACATTTC
GTCCCTNGTCTGAGCGGAGGGAATCTGTTCGCGGACTGGGCGACAACGGT
GGCCTCACTGAGAAATGAGTCTGATTGCTGGGTCTACAGCGAGATGCCGT
TGTCGTCCTCCTCTGGACTTCCATGAAAAATTGACCCGATAAGCGCCCGG
CTTCCTGTTGATACTCTTTAGCTGCTGNTGTCTGTACTGCATTTGTGGTA
TCTGGTTGCAGTGCACCTCTACATACCTGACCCCAGGGATATCGCAGAAG
AGGGGCGGACCAAGATTGTAAGGGTCGTGCAGGGTNTGTAGGGGTGGAG
>rnd-6_family-7842#SINE/MIR ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
TTTCAGCCTAAATGNCANNCCAGGAAGCTGCCGAGGTTTAGGAGAAAGAG
CTGAGCCACTNCCTAGCTGNCTANCCCGAGCAAGTCACTTAACCTCTCTG
GGCCTCTGTGTCTTCATCTATAAAGTGAGAACAGCGAGAATCTCATCCTC
ACTGGGTTGCTGGGGAGATGAAACGGCACAGGTGAATGCGGAAGTGCTTT
GTAAACTGCAAAGCATGGGCTCCNCAATGTCAGGATAGAGGGCGATGTAG
TATCCCTGNTTTGCCACTCTGGNNCATGGCTCGGCGGCTGGAACTTGCCA
GCAACGCTTAGGNAAGGCTGAG
>rnd-6_family-2264#LTR/ERVL-MaLR ( Recon Family Size = 27, Final Multiple Alignment Size = 24 )
GTGGTTTAAAATATGTCCACAAATTCTTTGACACTCCTCCCNTCAAGAGG
TGGGGTCTAATTCCCCTCCCCGGGTGGGCTCGG
>rnd-6_family-104#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
TGAGCCCAGCCTTCCAGCCATCCCTNCCAAGGCGCCAGAATTGAGGAAGC
CATCTTGGACCCTCCAGACCAGCCCGTCCGCCAGCTGAATACCAATCACT
GAGTGACCTCAGTCGACGCCACGTGGAGCAGAAGAATCGCCCAGCCGAGC
CCTGCCCGAATTCCTGACCCACAAAATCGTGAGATATAATAAAAATGGTT
GTTNTTTAAGCCACTAATTTNAGAGTAGTTTGTTAGGCAGCGGTNGATAA

>rnd-6_family-2816#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
CTCCAAGGACAATGGTGCTTCAAGGACAAAGGACGACCCTGCCTGAAAAA
GTGTCAGCGTTACACCCCCTACCGGACTCTTAATCGCCCTCCCCGCCACG
TTGCGACGGTTACGANATCCCTGAGCCCNCCCGGGCAGCGNGACCTGTCC
CAAATAAGGAAAGGCATCTGCCCCGTCCCACTCCCGCCCTGCAGAAGGAA
GGTATACGTGCCTCGACCAATCAGCAAACGAAATTTTCACCTCGGACCGT
TCCTTTGTTCTCTGGCTATAAAAACTGACCAGTAGCACATGCTCGGGGTC
GACTCTCCCNGACTACCAGGAAGTCGGCCCGCTGTTCTGGCAGCGACCCT
TCCCTCTAATAAATTCTATCTTCTTTACATTCTGCCTTGTGTCTGGAAAT
TCTTTTCCAACCCGCGTTCGGACC
>rnd-6_family-289#LTR ( Recon Family Size = 35, Final Multiple Alignment Size = 24 )
TTCNTTGTAAATTAATAAATCGGCATTCTGGTTTATACATCAGTCTCGTG
AGCCTGGTTAACGTGATCTGCCCCTGAGACAGATAGATCCGCTCTTAGCG
TGCTGACAAAATCAGGTTTCTGAGACACCAAGGCTGAGGGCCAAACCTGG
ACCTGGGGAATTCACCAAGATAATGCCACATTGTGAGGTCTCTCGGGAAA
CAGCCAGCCAGCCTTCCC
>rnd-6_family-2188#LINE/L1 ( Recon Family Size = 34, Final Multiple Alignment Size = 24 )
TGACAAAGAAAACATCATAAAGTTCCATAAAGTAGAAACATTACAAACAA
CGCTCTCTGATCACAATGCAATAAAACTAGAAATTAANAACGCAATTAAA
AACGAAGGCCTTCCAACCTGGAAAAATTTTTAAACTTCTATTAAACAACT
CATTGAAAAGGTGAAAGAAAATATAAACNGAAATTATCGAACTTCCGAAT
AATGTAAAAATGAAAANACTACGTATCAGAATCTATGGACGTATTTAAAG
CAGTGATCAGAGGAAAATTCATAGCCTTAAATACTTATATCAATAAAAAT
GAAAGAATAAAAATAAATGAATTTCCAACTCAAAAAGCTAGAAAAAGAAC
GACGAATAAACCAAAAGAAAGCACAAGGAAGGAAAATAAAGATAAAAGCA
GAAATTAATGAGGTAGGAATTAGAAAAACAGTAGATCTAATTAATAAATC
AAAATTCTGGTTCTTTGGAAAAATTAACAAANTAGACAAACCACTAGCTA
ACCTAATAAAGGAA
>rnd-6_family-9690#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
TGTTGGAGGAGGTCATCGAGAGGACGTGACCGCTG
>rnd-6_family-967#LINE/L1 ( Recon Family Size = 31, Final Multiple Alignment Size = 24 )
AACAGTTTACGGAAAAATAATCAATGCACAAAATTGTATATNTAATATNA
TCTCAACTATGCAAAAAGTANATGAGAGAAAAAGACTGGAAGGAAATATA
CCAAAATAGTTAATAACGATTGCTTTGTAGTGGTGGGATTNTGGGTGTTT
GATTTCTTTCCGCTTTTCTGTATTTTCCAAATTTTCTACAATGAGCATAT
ATTAATAAAGAAAAACANAAGTTACTTAATTTAAAAGTG
>rnd-6_family-196#LINE/L1 ( Recon Family Size = 24, Final Multiple Alignment Size = 24 )
AATTAAGACATTCCCAGATAAACAAAAGCTGAGGGAGTTTGTTATCGCTA
GACCCGGCTACAGGAAATGCTCAAGGAGTCCCGCAGGTGAAATGAAAGGA
CACTAGACAGTAACTCGAAGCTGTATGAAGAAATAAAGATCTCAATAAAG
GTAAATACATGGGCGATTATAAAAGCTAGTATTATCGTAACAATGGTTTG
TAACTGCACTTTTGTTTTCTACATGATTTAAGAGACTAATACATTTAAAA
AACAATTATTAGTCTAAAAGCTAGTATTACTGTAACTTTGGTTTGTAACT
CCANATCTTGTTTTCTACATAATTTAAGAGACTAATGCATTNAAAAATTA
TTAGTTTATGTTTTGGAGCACACAA
>rnd-6_family-5171#LINE/L1 ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
GGGACCCTCCAGGGCTGTGGGTGGGAATAAGAGGACACAGGAAGAGGGAA
TGGAGACCAGGTAGGTAGGGTACCACGGAGAAGAGAATCCCACTCCTGGG
CACATATCCGGACAAAACTCTAATCCAAAAAGATACATGCACCCCTACGT
TCAAAGCAGCACTAGTTACAATAGCCAAGACATGGGAAGCAACCTAAATG
TCCATCGACAGAGGAATGAATAAAGAAGATGTGGTACGTTTACNCAATGG
AATACTACNCANCCGTAAAAAGGAATGAAAGTATGCCACTTGCAGCAACA
CGGATGCAACTAGAGATTATCATNCTANGTGAAGTNAGNAAGAANGACAA
GCAATNCCNTATGATATCACTGTGNATGTGGAACNTGGCTCAAAAAATAC
GACACACTCGGGACTNCCCTGGTGGCGCAGTGGTTGAGAGTCCGCCTGCC
GATGCAGGGGACGCNGGTTCGNGCCCCGGTCCGGGAGGATNCCACATACC
GCGGAGCCCCTGCGCCACAACTACTAAGGCTGCACTCTAGAGCCCACGAG
CCACAACTACTGAGCCCGTGTGCCACAACTACTGAAGCCCACACGCCTAG
AGCCCGTGCTCCACAACAGGAGAGGCCACNACAGTGAGAGGCCCGCGCAC
CGCAACAAAGACCCAANACAGCCAAAGATANACTNATTCTGAGNTAAGAG
AAATAAAATAGAATATGACACAGATGAACCCATCTACGAAACAGAAACAT
GGACATAGAGAACGAACTGGTGGTTGCCAAGGGGGAGGGGGTTGGGGAGG
GATGGAGCGGGAGGTTGGGGGGAGNAGGNGTGAGCTTTTATATGNAGAGA
CGGANGAACAACAAGGTCCTACTGTGCAGCACAGAGAACTACACTCANTA
TCCCATGATAAACCATAATGGAAAAGAATATAAAAAAGAATACATACATG
TATAACTGAGTCACTTTGNTGTACAGCAGAAATTAACACAACATTGTAAA
TCAACTATACTTCAATAAAAATTTAAAAAAAAAAG
>rnd-6_family-3803#DNA/hAT-Charlie ( Recon Family Size = 25, Final Multiple Alignment Size = 24 )
CTAAATGTGGCTACTAGAAAATTTAAAATTACATACGTGGCTCGCATTTG
TGGCTTGCGTTATATTTCTACTGGACAGC
>rnd-6_family-534#LTR/ERVL-MaLR ( Recon Family Size = 32, Final Multiple Alignment Size = 24 )
CCATCCTGNTACCCTCCTGAGGATAAAGCCGACACACGGAGGAGGGCAGA
GCGAGAGAATCGCAGAGAACTGGACNGGAGCCCTGANATCACCCCAGGAC
ATGCCCTACCTCCGGACTTCTTGTTATGCGAGATAATANATTTCCTTATC
GTTTAAGCCAGTTTGAGTCGGGGTTTTCTGTTACTTGCAGCCGAAAGCAT
TCTACT
>rnd-6_family-4011#Unknown ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
AAAAGGACTTCGATATGGNATAATCCTATTTATCTTATCAGAAGTCCTAT
TTTTTACAGGCTTCTTCTGAGCCTTTTACCACTCAAGCCTCGCCCCTACT
CCCGAACTAGGCGGNTGCTGGCCACCAACAGGCATCCACCCCCTAAACCC
NCTAGAAGTCCCGCTCCTCAACACCTCCGTATTACTAGCCTCTGGTGTAT
CTATCACTTGAGCCCACCACAGTCTCATAGAAGGNAACCGCAAACATATA
CTCCAAGCCCTTTTCATCACAATCATACTCGGCCTCTATTTTACCCTACT
CCAAGCATCAGAATACTACGAAGCCCCATTCACAATCTCAGACGGAGTCT
ACGGATCCACTTTCTTCGTNGCCACAGGCTTCCACGGACTACACGTCATC
ATCGGATCCACCTTCCTCATCGTTTGTTTCATACGCCAAATAAAATTCCA
CTTCACATCAAACCACCACTTCGGCTTCGAAGCCGCTGCTTGATACTGAC
ATTTCGTAGACGTCGTATGACTATTCCTCTACGTATCNATCTATTGATGA
GGCTCATAGTCCTTTTAGTATTAATAAGTACAACTGACTTCCAATCAGTT
AGTTTCGGTACACTCCGAAAAAGAACAATAAATCTCCTATTAACGCTACT
AACAAATACAACACTAGCCTTACTACTCGTACTTATCGCCTTTTGACTCC
CTCAACTAAACATNTATGCAGAAAAAACAAGCCCCTACGAATGCGGATTT
GACCCCATAGGATCCGCCCGCCTACCTTTTTCCATAAAATTCTTCCTAGT
AGCAATTACCTTCCTCCTCTTCGACCTAGAAATCGCCCTCCTACTNCCCC
TCCCCTGAGCAACCCAAACAAACAACCTAANAACAATACTTACTATAGCC
TTATTTCTAATCTCNCTACTAGCAGCTAGCCTAGCCTACGAATGAACCCA
AAAGGGCCTAGAATGAGACGAATACGGTACTTAGTTTAAAACAAAACAAG
TGATTTCGACCCACTAGACTGTGATTCAAACTCACAANTACCAAGTGTCT
CTAGTCCATATAAATATCCTAATAGCCTTCACNATATCCCTTGTAGGCCT
ACTAATATACCGATCCCGCCTAATATCCGCACTACTNNGCCTAGAGGGTA
TAATANTATCACTNTTCATCCTAGCAGCCCTCACGATCCTAAACTCACAC
TTCACCTTGGCCAGCATGATACCAATCATTCTCCTAGTATTCGCAGCCTG
CGAAGCAGCCATCGGACTAGCCCTACTAGTCATAATCTCCGACACATACG
GCACTGACTACGTACAAAACCTCAATCTCCTCCAATGCTAAAATTCATCA
TTCCCACTATCATACTAATACCCCTA
>rnd-6_family-1703#Unknown ( Recon Family Size = 28, Final Multiple Alignment Size = 23 )
CTTTGCTGCACAGTCGTCTTTGGGAGGACAAGTTGTCTTCCACGAAAGAA
CACTTGGCCTTTCAATCCCTGCCANGTNCTCATCCCTCAGCAACCGTCGG
TGAGTANGCCCACCACACGGGGCCTCTGGCCTCAAGCTAACGTTCAGGTT
TTCTCATGACAGACNTAGGCGGGCNACAGGCTCACGGCAGCCTTTGTCAA
AGCGNTGCTTTAANTCTAGGNAGCGTTTCTGGCGTCTTAGGACACGGGCG
TCTGCGCTAGGATCCGAGACGTAAACGACGGACTGCCCGTCCCTTCTGGG
CCTTGTGAGCAGTGCTCGGCTGAGGGCAACTATANGCCGAAAGAAGGGCN
GTGAAGGGCGTCTTTGGTTAAAATGCTAGGATGCGG
>rnd-6_family-8151#SINE/MIR ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
ATCATTNCGTGTCTGCTGAGTNCAGTATGATTCGTGGTCAAAGAGGACTG
GGCTTCAGNGGCAGATATCTGGGAGTGGATCCAAGCTTTGGTTTTGCCGC
TTCCTAGCTATGTGACCTTGGGCAAATTATTTAACTTCTNTGAGCCTCAG
TTTCCCCATTTGTAAACTGGAATAATAATTGCCTCCAACCTCATAGAGGT
TTTTGGGAGGCTTAAATGAGATAATGCCTTTAAGATGTTAAGCACANTNC
CTTAGACACGGTAAGCNTTCAGNGAAGAGTAACCCCTGCTAGCATTA
>rnd-6_family-14414#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
GCTCTTTTGCCCCTTTCCTGTTTGTCCATTTCTGTTTCCCCTCAGACCTT
AATTATAGAAATGAGATCACTAGGCAACATTTAACCTAACTCCTGACTTA
TG
>rnd-6_family-4843#LINE/CR1 ( Recon Family Size = 34, Final Multiple Alignment Size = 23 )
TGGTTGAGAATGACTGGTCTAAAGACCATATGACTAGTAAGAGTAATGAA
GGCAGTGGATATTTGCGCTGGAGAAGAAGAGTCACGGTGANGACATAGCA
GTTAGTCTTAAAACTCTTAAAAGGGCTNCCACGTAGGGAGGAGAAGAATN
ATTCTGTGTGGCTCCAGAAGGCAGAACTAGGACCAANGGGTGGAAGTTAC
AAGGGGGCAGATTTGGGCTCCGTNTAGAAAAAGGGGGAACTTTTCAACAA
TTGGAGCTGTCATTGAAGATGGCAGTTGCTGGATGATTCAGTGCAGTGAG
TTCCCCGTCACTGGAAGTGTTCAAGCAGAGGCTGATGACCACTTGTCAGG
GATGCTGTAGAGGGGATTCTGGACTGAGGGGTTGGATAGATGACCACNAA
GTCTCTTTCTAGNCGAGAACTTTATGTTTT
>rnd-6_family-3242#RC/Helitron ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
GCTGCTTTTCACCCTGGAGCACGCTACACAGAGTTGCCCATGTGAGAAGC
AGCTCGATCGCAAACCAGCTCTTCTTGCAACTCATTGGAGTTCTGTCCTG
TGACTTTCGGNTTGGGGCTCATATCTTGAAACCTCTGTCGTCTGTGCCTG
TGGCCTCTCCCAGTCAGCAGCCACATGGGCTTCTTGTGCCTCAGTTTCAG
CTGCTCTGAGGAATGGTCTCGCANTCTTTGAGGCTCCTCCTCAGGATCCC
CAAAGTGAATTTTGTATACGCCGCGTAGCCTGTATTTTAAGTCAGGCCAT
CCCAAACATACCTCCAAATTTGGTGAAAATCCGTCTAGCCATTATGTGAC
GCGNTAACAGACAAACGGAAACTTAATT
>rnd-6_family-10681#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
AGAAAGTAAAAATTAGCTCGGACTGAGAAAGTAAAAATCTGCCCTGCCAT
TCATCAGGCTGGGATAACAGACGCAGATAAAGCCAGCTGCAAAGTTAACA
GGAAACAATATTTCTCCCAAGGACACGCTGCAGCTGTAAAGTGTCATAAC
AATCCCCTTCTCTGAGTGACTACTGCTTTCTTACTCACTGAGAAACTTTG
TTCTCTAAAATCANAGACTATCAGAAACTTTGCTGTTTGAAATCATATCA
GTAAGAATGAAACATCCCACTCTTGCCTGGAGGATCTAAGTCACTTTGAC
ACAGAGAAGCAGCCTCGATTTCCAACCCAGGTGCAGAGCTTCAGATAAGG
GGTTTCTGGACACAACATTCCACATCTATCTTAACTTTGTGGTTTCCAAG
GAAACAGGACCCTGGGTCCACTTCGCAGTCCAGACCTGATGTTGACCCCT
TTACACGGCCCTGCTCTGCTTTGAGCCTATCGAAACACTGCTTCGTTTAA
ATTTCACCTAAACTCCACCCTTCCCCCAAATCCTACAATAACTCTGTNTT
TTCCTTTGTTTGGTGAGATGCCCCACGGTTCCTCCGGTGCGCAGTCTCCC
TCGTTGCGATGAGTCAATAAACCTGACTTTGTCGGACTACAGGTTTGTCC
CTGGTGGTCTTAGTGCTGACTGGT
>rnd-6_family-8181#LINE/L1 ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
CAGCTGAGTATGCCCAGAGAAAGTNAAGAAAGCCGAAAAGAAATTAAAAG
AGAATTCATTTGACCTTGACGCTTGGAACATTCTCCTTCGAGTGGCACAG
GTTTAGTGACATAGGATTACGTTTCCTTCTCTNTGGGTCCAATCACACTA
CTTGGTTCTGCAGTGAATAATACATTTATAATCATAATATTGTAAATGCT
GTTTATTGGTTTTCAATTTTAGAATCAACCTATAGACAAAGCACGGAAGA

>rnd-6_family-3160#DNA/TcMar-Tigger ( Recon Family Size = 23, Final Multiple Alignment Size = 23 )
GAGCCCAGACCTGCCTGAACCTTTCCCNCCCCAGTCCCCACAGAGCTGAG
AGCTTAACCTCCACTCCCCGNCCCAGGGAACCCTCTGCGACAACANACAA
ATCCATTGACACGTATTAAGGTTAGAGAGGCTTAATATTAAAACAGAGTG
GAGTAAACCCTGCAGGCTAGCAGAGACACTTTAGAATTCTCTATTTCCCC
CATTCACCACTAGGNATTTGATAGTTATCTTAAAGACAAGATGGTCTGAA
TGCCCAACATCTGCATATAGACTTTCCTTTTGTTCCTTCCTTTAGNCTAG
CTCAGTGGTTCTCAAACTGGCTTGCGAAAAAGCTTACTGTACGGGTTGTA
NACANAAAGCCATGTATACTGTACTTTATGGGCGATTTAAGGGATTTTCA
AGGGTAATTTTGACTCTATGCAATTTTCACCTTNTGCGCTGACTTTAGAA

>rnd-6_family-50#LTR/ERV1 ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
TAGCAGGAGAAAATATTTGTGGAACTAGTTCCTTGGATAGCGACTCTGGT
AAATTTGGTAATGAGTACTCTTGGTTTNATTGATCCTTTTCCTCCCAGAG
ATGGTCACTGTTTTTCTTTGTCTCTGTCTTGTGTCGTTTGTCATAAGGAG
GAAAAACCATAGGGCAGAACACAGGCATAGGCCCTATAAGCCTGCTGTTC
GAGCCGGCCTCACAGACTGGTGAGTTNACGGTTCTCACCAGACCGGCGTC
TGTTTAGACAAACTTTGCTGCGGGTCCCCTATGTAAAAACCGGATGAGGT
TTTTCCTTTCGTCTTGTTCTATGTCCTGAGAGCTTGGCTTTGTGACCAGT
GAGAATATTCTCTCTGGTCTCCGCCATCCGGGGCGTACCGGGGTGCATCT
TGGCGGCCAGTCGAATAGACTGGGATTCCGAGACACAAGTCACAAGCAGC
CGTGCCAGCTCTCAGGGGAGTTTGTCATAAGGGGTCCCAGTCCATAAGGG
GCCTTTGTCGTCTCAACCTTCGTTGCCTTGTTAGTGCTGGAAAAGTCCCA
TTCCAGTAGCGCCTGCCCGGTGTCACAGATTAGCAGGTCTGTGACTGGAG
GTGTCTCACATTCCCGTGGGAGACCAGAGACACCGTTTTCACTACACCAT
CCTTACGCCTGTGCAANGAAGGCCTTTGCTTTCTTAGACTATCTGGGAGT
GAACTTTCTGGATCTTGTGAGGGCTGCATCTCTTGCTTNTGGGAGGCCTC
TTGCGTCCNTGGTTAAGCCATAAAAAGGCTTATTGGTCTGAGTCGCTATT
TGAGATTATATAAGATCCTACTCGTCAATGGCCAGACGACGGATCCTTTG
AATTGGAAAAGTTCTATATTTGAAAAAAATTTTTTGAGAGAACTCTCATC
CTAAACAANTGTCNTATTGGTACCTATTGGAAAGATCAAATTGAAAGGGG
ATAAAAAGAAATATAACAGCTAGCTTAGGGACTCCCTAACAAGATGAAAG
AACAGAAATTAGACTGAAAAAATTGTCCCATCCAACATAAATTCCCCTTC
TTAAAAATCCGGCCCCATCTCCTCAGCAAATTCCCTTAGNTCCCAAAACT
CCTCCACCTTCCCCAGAAAATCCCTTAACACCCAGCTGCTTGTTTTAACT
TCCCTTTCCTTACAAGATTTACGGAGAGCACTCCGGCCTANTCTCTAGGC
CTAGGGTNTACAGGTTACTCATGTAAATGCTAAAAGCCAGGAAATAAATT
TAGCAGAAGCGTCTGGAACGGACAGTAAGTCTCGCGTTGCTGGTCTCTAT
AATCAGGCTTTGCCAGCTTCAGGCCTTCCTATGCAACGTCCTTTGCAGGT
ATATCCTAGANCCCCACCCAAAGAATTCACGTCCCCTGGGC
>rnd-6_family-275#LINE/L1 ( Recon Family Size = 26, Final Multiple Alignment Size = 23 )
AAGGCAAGACTCCTGTGGGCGGANCACACGCAGAGGTGGGGATAAAACCA
AAGCTGAACCCCAGGGACGGGGCGACTAAGGAAGAAGATCGAAAATCTTT
CCANCGGCTGTACAAGCTGCAGATTAAATCCCCACGATCAGCTAGGTAGA
CCCCGCGTCTATGGAATATCTGAGTAGACGACGAGTGTTCCCACAAATGA
AAACGGTCTAGCTCTGGCAGCTGTGGACTTCGGGGGCAAGCACACGCAGG
AATTGGGCCAGATCAGAGTCTGAGTGGCCCCCACAGGGCCCACAGCAGGT
CCAGAGACCAGCCCAGAGGCAGAGGAGGGCCTCTTGGGGAGGCGGAGGTG
GGCTGTGGCTCACGGCGTGTGCAAGGACACTTACAGCGGAGACCCCAGGG
AAACATAATTATTACTATTAATTTTATTATGTTTTGATTCATTCTGTTGT
TGGTTCTGGCTTTTTCTTTNTTNTTTTGTTTNGTTTTTTGTTTTTTTGTT
GGTTTTTTTTTAGTCTTTTGGGATCTCCGTGTTTTATAACTTTTTTTTAA
TATATTTCTATTTTTACTTTGCTTTTCTGTTGTTCTGTGTTCTTTTCCCT
ATTTTTTTCTTCTTCTTTTTCTTTAATATATTTTTTTTTTAATATTTCCA
TTTCTACTTTGCTTTTCTGTTGTCCTGTGTTTTTTCCCATTTTATTTTAT
TATTATTTTTTTAATCATTTTTATCGGTTTGTTCTGTTTCCTTGCTTTAT
TCTTCAGTTGGCACACTGCTTTGGTTTTGTTTTTAGGTTNTGTGTTTTTG
TTAGTTTTGATCCTAATTGTTTGATTTCGTTTTTGAGTTCTTCTATTTGT
CTGGTTGTTCTCTTGCTTTTTGTTTTATTTGGCTCTGTTTTTGTTTCTTT
TACGTGTGTGTGTTTCCTTGTTTCTGTTTTTGTTTGTTTGATTTTGTTTT
TACCATTTCTCTGGGGTTTTGTTTGTCTTTTTTCTTTAATATATTTTCTA
TTTTTTTTATATTTCTGTTTCTACGTTGCTTTTCTGTTGTTCTGTCTTCT
TTCCCCTTTCTCTTTTTCTTTCTTTTTTTTATCATTTTCGTCGGTTTATT
TTNTTTCTTTGCTTCATTCTTCAGTG
>rnd-6_family-3389#DNA/hAT-Charlie ( Recon Family Size = 24, Final Multiple Alignment Size = 23 )
ATTAAATATAATTTTTGATGTAAATTATTATGTGTTTTTGGCATNTAACT
CGGAAGGAATTCAAAGAATTGAGTGGCGTTGCTATAACAAGACTTCCTTC
CATTCTNATTTGCCTNTTTATNTAAGCAAGGCTGCTTGCGCTCTTGCATT
CTCAATTGAAAATCGGAATAGAACTCTTAATTCTAAGCCGAGCTCTATTT
TAGNAATAAGTAAATTCATCCAAAGATACCAAACTAANTGGAAGGGACTT
AAAGCTCCACTCATCTCATTTAAAATGTATTTCCAATAAAATTTTACTTT
CTATGCTTTAATNTTTATCCAAAATTGTACATATTTATGTTGTTTTGATC
AATCGATGTTAATAATTAGATAACTCAATCCAGAAGAAATTTNAATNTTT
AGAGTCTTACGATCACAGGAAATTAAAATTTAAATTTNAACTTATATGTA
TATATTTTTGTTGCAGGAGAAAGGTGATCAATAAAAGACTTNNGCGTAAA
ATACATTAGGATAAAATTCTGTGGGGGAAGTGGAATGGAAATACGAGTTC
AGGAGAAAAAGGAAAATGTAAAATTTCTGACGTTAAAGGAAATGTTTTTA
TGTTTTTTAAATGGATGATGGTGGGTATCAAATCGCTATGGTATTTAGAT
TCCATTGGATACATTTAAAAGAGTGATGTAACAGTTTTATTTTAAATGCC
AATATTTACAATATGCCGGAAATTACGTCTTTGCAACTATTTAAACTTAT
GATGAAATTTTAGATGTTGACTTAAAAATGCATAGTTTTTCAAAATTCTT
TTAGGGGGCATGTGAGCAAAAAGTTTGAAG
>rnd-6_family-4021#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 23 )
GTGGCAGAGACTGGCTAGCTGCTCACCAAACCCGTTTCCTCTTTTTCCTG
GGCACACAGCNAGACTACATTTCCCATNCCTTGCAGTTAAGCATNGCCGT
GTGTCTGGCAGCAGATGCAAGTGACAGACGTGCATCACTTTCANTTTGGC
GCATANAAATCTNCCACATGTNATCTTCCATACTCCTTNCCTTCTGTAGC
TCTATGCGGATGGATGGCGACTTTGCAAGTTATGTGTTGAAGATGTTTCG
AAAACCATGTGTTGATGATGGCAGAGTTATAAGATGGAAGGAGCCTGAGT
CCCTGAATCACCGTTTAGGGGAGAGCCGTGCATCCAATCAGGAANACCTG
CCAATNTCATGCTTTATCTA
>rnd-6_family-4777#LTR/ERVL ( Recon Family Size = 27, Final Multiple Alignment Size = 23 )
GCTGTAGAGAAAATATTTTCATGTTTCTGCACGGTCGGGGCTTTCTGAGC
AAATTTTGCTGAAACTTGGAACCTGGGCTAAAAGCAAGCCTTGGAAGGTA
ATTTATGACGAATAGACAGTGAGANCTCCGGAGAGATTTACTTCCCGGAG
GCACGTGTTTACATTTCAAGGGGAGTTGAAACCCAGGACCNTGGAGACAT
TTCAAAGGCTGAGGACCCAGTNTTCTCTCCAGATTGCTTTTCCAGATCTC
TCTCAGGAGGGGAGGGGGAGCAGCTGCCTCCTCTCCTATATAAACGCCCA
GATTCATTTTCTTTTGGGAGGTTCCTCNCCTGCGGTACAGACCCCGTATG
TGTAGGGTGACATCTGGCTCTCATCGCGTCGCCCCAGGGGGAGGACTTGG
GCACGAGGGAAACGGCACGTTGTTATTTGCTNTGAGTAAGTAATAANAAA
TCTGTCTCTGNTCCAGAAACCTCGTGTNTGCATTCAGGATAAAATNAATA
AATATAGTAC
>rnd-6_family-5278#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
ACAGCAGGCAGGTAGCTAGATATGAGCAGAGAAAGGGGGGCAGGGGCCAG
GTGGCAGGAAACCACGCATCTTGTAAACAGCGGGGGTCCNTGGGCAGACA
AAGAAAAGCAGGAACCTCCAGACTGACAGGAAACCACACATTTTGGGGTG
ATAAGTGTCCTGGAGGCAGACAAAGAAAGGTGGGGAAAGGCGGGAATCTC
CGGCGTCCGAATGTAACCTGTTGCTCATTATGCTCTCATTACAATAAAAT
TAGCCTTGCAGATAAGAAGTNCCCATCATGCACCGACGCCATGACACTTC
CGATCAAGGCTAAATAAGGACAAAAATCCCTCCTCCCCTCGGGAAGGTGG
AGCTGGGATGAAAATCAGGGAATACGACCCCCAAACCCCTCCTTCCCCAG
TGAATATTCCGCCCCTTCATTTNTACGCCCCNCATAACCGGCTTGCCAAA
GAAACTCAGGGCAGCTNCTCACCTGTCTGCCCGCTCTCCCTCTGAGAGCG
TACTCTCGCTTAAATAAATCCTCACTTTACTTTCTTGACCTCCCTGTCTC
GTCTCTGAATTCTTTCTGCGACGAGACAAGAACCTTAAATTCACCGGGAA
CA
>rnd-6_family-10259#LINE/RTE-X ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
GGGTTAAGCCAGATNANCAGAGAACTGCACACCTGGGCNGCCCATCTAGN
CTCCCTGCAGAATTGCTTTTNCTGAATTGCGCTTTGGCGTNGTGCCATNA
GCCTACACTGAGGGACGCTATAAGAAANAGNCCTGTGAAACACATCGCCG
NATTTACTGTAAGGATGTTNTTGAGGACGCTGTTTACTATGTCACAGTGT
CCTCTTTATGAGGACCCAAGGGAGAAATTTTTCTCTGGTCTTAGTACCAG
GAATAGTTGTGCTTCTCCTGAGCAACGGGTTTGTTTTTNTCTTATGGGCA
CTGAGTGACGTCTGTTTCCCCTCTTCGGNTGCTGAAGTCTAGAGCCAAAT
TTGTGGCCCGNCTCGAGCAAGTTTAGGTGCCTTNATGGCACTCTTGACTT
CATTTTATGCTTCCTCCTCTTGCTTTCCTTCTTTCCCCGTCGCCGTTTAT
TTTTTTTCTTAATTTGTCTAAANATTGTAAGCTGCCGTAAATTCTTTTCT
GGAAAAGATGTGATGAGGTANGGAAGATTAATAATCTGAGATAATAAACA

>rnd-6_family-1611#LTR/ERV1 ( Recon Family Size = 30, Final Multiple Alignment Size = 22 )
CACCNCTTTCNCCTCACCCCTCACCCCTCCCTCCGGCCCGAAGGAGCCAG
AAGCAGGTGACGGAAGAGGAGAGGGTCAAGCGACAGACCCTATGNTGCCC
CCTCCCCCGATCTGCAGGTCCCATGGCTGGGCCTGAGCTGGGGGGAGGGG
AGAAGCTTTNAATTGGATGAGAGACTGAAGTTTTGATTTAGATTGGACTG
GACTTTNTAATACCTGAAAATGAGACTGTTTCTAATANCTGAAAGTGACC
AGAAAANTNTATGGGATCCGCCGGAGATATCATCCAGGGGCAGGAAAAGG
AGATTCGACAGAGCATGTTTAAAGGCAGTGAGAGAAAAATAAAGCTGTTT
CCTGNTTGTACCCCATCGAGTCCA
>rnd-6_family-10599#Unknown ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
TGTCACTTTTGCAGAATTTCACTTTCTGAATTCACCTTGTCAAAGGATGA
GACCACCACTTAATATCTGAAACAAAAAGCACAAAGCTGAATTTATTGCT
TACTATAGTAGGGAGAGCTATGCTGGTCAGGCACAGTCTCTCCGAGCAGA
GCAGACTGCTGATCTTATACGGGGTTTTCGGGAAGCGTGGAGTTCAGGGA
TTGGTAGACTTTCAGAGGTAAAATGGATTGACGTCATCTGTAGGCATGGT
TACTCGGGTGAGACTGTTGGCACTCAGGCGTGTTTATTGGAGTGAGTCCG
TTCCTANTTGGCTGACTTTCAGAAGCGAAGAGCTGNCACTGATTGGCTGG
CTTNCAGAAGCGTGTTCACTGAGGCAAGTTGTCATTGATCGATTGAACGG
TTCTGGCGGCTNCTTGTTACCATGGCTACAGAACAATCAGTCTTTTCCTA
GGNGTGTGGAATATTTTTNTTCTCCTTGTGATGTTTTTTCACTTGTTACT
TTATCCTGTTTT
>rnd-6_family-4342#SINE/MIR ( Recon Family Size = 28, Final Multiple Alignment Size = 22 )
CTCAGGTGCTTANNGTTTGACCTTGGAGTCGAATGACCTGTTTGAACCTC
ACTTCTGCCACTTACTAGTCCTCCGAGCCTCAGTTTCCTTATCTGTAAAG
TGGGGATAAAAATAGGACGTCCACCATGGGATTGTTNTNAGGACTAAATG
AGTCAAGTATNTGTAAAGTGCTTAGCNCAGCGCCTGGCACAGAGTACTTA
ATTAAGTGCTTGATGTTATTATTAGTCT
>rnd-6_family-6002#DNA/hAT-Charlie ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
GCATGCATTCTAAGTACCCTCGAGACAGTCCATTGGGGCGTGGGAAGAAA
ATATTAGGATTTCATTTATATTAACAAAATAGGAAAAAAATTAGACTTTT
GCATTAATACTTAATATGGATTGACACCGGTCAGGTGTCATGTGACACTG
AAGGAAGAGTGGACANTTCCGGGCAGAGAGNCACTTTAAGGTGTTGCCAT
GATTTGCAGCTTACATCATGCCCGGTTAAATGGATTTACGGATTATATTA
TCTGGTTTTAACTAAACTAACTCTCACAAAAATGGACAAATGGCTTNAAA
AGATTCCTGCAAAGAAACCNCAGATTGAAGATAGCATTAATAATGCAAGC
ACAAGCAAACAAGAAGATGCAGAGCTGACTTCTCCTCCTAGTACGAGCTC
TTCGTCGGNCACATTAAGAGGTAAAAACAATGACGATCTAATCGTA
>rnd-6_family-8883#LINE/L1 ( Recon Family Size = 27, Final Multiple Alignment Size = 22 )
CTTAAACATAGAACTAAGACTAAACAACTGCGGGAATTATGGTTACAGAA
CAGAATGTAAATGTTATAAACGTTGACAAAGTAAAAATAATAATCGGGAG
NTGGGAGGAGGGGGGAGGTGGAAAGCGTATAAGAGTGCTAATTTCCTCAT
CTTCATAGCAGGGAGTCAACGATACTGTCTAAAATTGAANCATATAGTTA
ATAAAANAAAATGATTCCAATCTCTTAACGTTTTTCATAATTNTTTTCTA
ACCTTAGAGGGATCTTTTAGGAANTAATATCTCTTANGNTAANAAACATT
TACTTAANTTCAGCAATTCTTCAGTTTCACTTGTTTCTTTTTCTTCCGTT
GAAGTTCAAGCAAAATTAAAACTTTGTNCAAGTCAAAGTAGCATGTNGGN
CGATCCTATCCTTATGGNATTATCCCTTATCTCTCCGTCTACAAATCTAT
GTACGGTGTNTGTG
>rnd-6_family-6697#LTR ( Recon Family Size = 22, Final Multiple Alignment Size = 22 )
GTTTGGTGNCTTTTTTTTTAGATGTTGTCNGTATGCGGGGGCTACAATGA
GGCCTCCCCAGGAACTTGGAAATAAGAGAACTAAGATTGNCTCTGAGAGT
TAAACTNTAAAATCAGCACAGAGCAGAGATATGCAAAGTCACCTTAAAGA
GACAGAATGGCTCCCTGGCCGGTAAGACTTGACGGTAACCTGATTGAATG
TATTAACGTATCTAAAGAAAGAATGTGTCANTCAGAAGTGCCTGATCAGC
CACCAACGCATGAAGAAAAGACAGTCACCGAGGCANTGACCATGNAAAGA
GGACAGAGTTTGGGCCAAGAGTAACGGTATGGAAGCAGGCANCACCATTC
TATTTCAAGTATTTCCGTCCACTGGCCAGACCGTCCCTATTGTGGAGATG
GACGTATCAGGTNATTTTAGCCTGATGCNATTAAACATTCGATTTATCTA
ACTCCCCTTTGTTTTGT
>rnd-6_family-1646#DNA/TcMar-Tc2 ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
AAGGGGAGAGGAGTTCACAGACANAGGAGGTCCTCTCAGANTTAAGGGGA
GTTTTTCTTAGAAAAAGAGGGAAGGTTTTCCCCGGACCAAAAGAGATTCC
CCCAGGGCTCACAAAAGAGAGAGATGGAACTCGCTGAAAGTCATCAAACC
GTGGGAGCCCTGAATNACTCACCNAGTACNTTAGTTCTTGATGCATTTTG
GAAACNTGTATNTGAACAGTTANATAGTAAGCTTANCACGAAAAGTGAAT
GACATGGTTGTTATTCCCGGTGGCATGACCGGNCATTGCAACTGCCCTTA
GCGTTTCAGTCAACAACCATTTAAACCATTTGAGGAAGGAATATGAGTCC
TGGATGTTGTCTGAAAACCTTCCGTTGATACCTTCTGGTAGATCAAGAAC
GTNCCAGCATCAAAACTTGCAGAATGGGGTCAGCGGCTTGGAAGAAAATC
CCGGAGACAATAGTGGAGCACTTTTTAAGAAATGCTGCATCACCGACGCT
CTTGATGGCACAGAGGACGATATTGTGTGGAAAACACGGACATTGACAAT
TGATTCAAAAAGTGATTCAGAAGAGTCNGAATGTGAAGAAATTTTAGGAA
TACCTTAACCAATTTTACTTATATTTCCTTTTTTATGTATGCACAAGAGT
GATANATGATAAAAATCTATGTCAAATAAGTCTAAAAGNGTTCTTTCAAT
AAGTATAAAATAAAAATTCTAAGTGATAAGAAAGCACTGATGTCAGTTCG
ATTGGCAGCATTTTTTTC
>rnd-6_family-5323#DNA/hAT-Tip100 ( Recon Family Size = 23, Final Multiple Alignment Size = 22 )
TGAATTTGTGTTTTGTAAGTGAGTCCGATGGGACAATGGAGCATGCGCCG
GGGGCTTGGAGCCTCGGCTCACGCGTGGTCCCGCCTCCCGGCCGCCTCTC
TGTCCCCGGGACGGGTTCTCGGCCGCCCACTCCTCTCCCCCGCCCAGTGA
CCGCTGCCGCCCTCCGCCCCCGGCGGGGGCCTGGGCGCGGGGGCAGGGNA
GGCCCCATGGGTGNACGCAGNCCGCGCGCCTGTGAGGGTCTGCACTCGCC
CAGCGAGTATCCCCGTGCCCGAGGGAGCGCGACATTAAATAGCAAATAAA
AAACACCATGACAGATAGAGAGACGGCTGAATAAATGA
>rnd-6_family-6535#Unknown ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
TTTTTTTTTGCTGCAAAAAGCTTTATTGTTTCCATTTGGTCCAAGGCTTG
GGAGAGGGCTCCAGGGTGGTTAAAAAGCTGCCTAGTGGCTGCAGAGAGGG
GCTTCAGGCAGAAGCCCTGACGCCAGAGGGGCTCCTCAAAGGCCGCTGGG
CTCCGGAGGCTCCTAGTCGTGCTTGAGGGTGAGCCTTTCGAAGAGATACT
CGCCCAGCCCAGCCTGGGACCAGCCAGCCTGCGGAGGTTGGTCAGGTGGT
CGCCCATCTTCTTGATGAGTTTCACCTGCTCATCTAGGAAGCGGCTCTCC
AGGAAGTCACAGAGGTGGGGGTCTGCGCGGGCAGAACCCAGGGCGTGCAG
ATCCGAAAGGGCCTGGTTCAGGTTCTTCTCCGTGAGAACGGCGGCTTCCA
TAGCGTCCTGGGTTTTACCCCACTCATCTTGGGACGGCTTCTGCACGTCC
TGGAAGAGGGCGCGGCCGCCGCGCTGGTTTTGCATTTTCAAGAGACGCTC
GGCGCCCTCGCGCTTCTCCTCGGCCAATTCGCGGAAAAAGTGGCCCACGC
CCTCCAGAGCCACGTCGTCGCGGTCGAAATAGAAGCCCAGAGAGAGGTAG
GTGTAGGAGGCCGCAGATGCANGTTGACCAGGCGGTTGACGGCGGCCTCC
ACCTCGGTGGAATAATTCTGACGAATCTGGGAGCTCATGGTTGATCGGTA
ATAAGGAGCTAAGCTCAAAAAATGGTGTTGGCTGGTCCCGGNGGCCGAGG
ATAGCTGAGTGGCTGATTCCGAAGGTTGCGACTGGAAAAAAGGTTGGAGG
GTGGTCGGAGGCTGGAGCAAGGGGCGTCCCTGGGTCTGTTCCGTCCAAAC
ACTGTTGAAGCAAGAGACAGATCCGCGGGACTGCCTGAG
>rnd-6_family-2194#Unknown ( Recon Family Size = 25, Final Multiple Alignment Size = 22 )
GTCAAAGGAAGACTCAGAGACAAAAGCATTTAGAAAAGAAAAGAACTTTA
CTTGCAAAGAGGTTTGCAAGGGAGTCAGACTTCGGAAGGACTGGCTCGCC
AAATAAAAAAANACAGCAGGTATTTAAAGGAAAAAAATCACCAAGGTTAC
CGAGTTTACAGTTAGTCTGTTCATGGTGGAAAAACAGCAATTTTCTCGCA
TGATTATCGTATCCACGAAGGTCGTGACATNTCTTCAGACATCAGCATTG
CAAAAGTCAGGGATAAAGTTGTTTTTGTTAGGGAGTCAGTAACTTACAGG
AAANGCTCAAGGTTTCGTTTATTTTGGGGACTAGAACTAGACAGGGTGAC
CCTACGTTTTTTGTTATG
>rnd-6_family-840#LTR/ERVL-MaLR ( Recon Family Size = 24, Final Multiple Alignment Size = 22 )
GTGGTAGATTAAAGATGGCCACAAATTCTTTGNCACTNCTCCCATCGAGA
AGTGGGGTCTAATTTCCTCTCCTTGAATCCGGCCGGGCTNTGACTACTTT
AAACCGTAGAGTAAGGTAGAAGTGACNCTGCCAATTCCTGANTAAAGTCT
TTAAGAGTACCAGCTTCCTCCATGGCCTCTTGGAGCCCTGAGCCCAGNTA
NCCTGCTGAGAGACCATGTGGAGAGGCCCCGAGACTACATGGAGANGGAG
ANGGGCCCAGCTGAGNCCAGCCTTCCAGCCGTCCCTACCAAGGCGCCAGA
NATGTGAGCGAAGCCGTCTTGGGCTCTCCGACCAGCCCANCCACCAGCTG
AATACCACCGAGTGAG
>rnd-6_family-4526#DNA/hAT-Tip100 ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
TTACTGTGAAGCTAATGAAGCTTAAGCTTCAGGCCCCTCACTTGCACGGC
CCCTGTGAGTGCTGGGAGTTNCTGGGAGTTGTAGAGTGTTCTAGGTGGGA
GGGGAAGCCAGGTTGCAATCAGGAAGCATTTCTATGTAAGCATTTCTGGT
AAATTGCCTAAAGAGATCTCAGAAGAAGGACCTGAATCTCCAAGGCTCCA
GTAATTTGTTGTGATTTNTTTTCTCATTCTAAATC
>rnd-6_family-53#LINE/L1 ( Recon Family Size = 25, Final Multiple Alignment Size = 21 )
AGAAAATACAGGGGACAGAGGAACGAGTTAAGTGACACCGCGAGGAAGCA
TCAGACAAATCCAGAAGGTGGGACATTCTGCAGGACAACTGGCCCGGTCT
CTTCAANAAGTCAATGTCATAAGAAAGGAACTGGNCCAGACTNAAAGAGA
CTTAAGGACAAACAACCAGATAGAAATGTGGTCCTGGATTGGATACTGGT
TTGNACAAAACAGCTATAAAACATGTTTGGGACAACGCGGAAATTTGAAT
ACGGNCTGNGTATATTAGATAAGATGAAAATTTACTGACACGGAANGGTG
GAGATCGTTAACTAAAAGCAGGTTACAAAANAGTATACGTCTCATTTTGG
GGTAAAAATATACGCACAGAAAAGGTCTGGGAAGNATAACGCTAAGGATT
NANAGTGGTAATCTNTANATGGTGAGNATATAATCTTTATTTTCTTTTTG
CTGTNTGTATTTCTAATTTTCTAATATATACAGTACTGCTTCTGCAATAA
TGANAAAAAGGTTATTTCCAAATAAAAGTGTCTNNCAGGGANGCTGA
>rnd-6_family-3288#LTR/ERV1 ( Recon Family Size = 21, Final Multiple Alignment Size = 21 )
CATTCTTCATTCCAGAGAGAAGGTCACAGTTTGATAACCTCGAGAACCAC
AGAAGCTCATC
>rnd-6_family-589#LTR/ERVL-MaLR ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
AAATAAGGNCCTNAGTCCAACAACCGNCAAGGAACAGAATTCCGTCAACA
ACCACGTGAGCTTGGAAGNAGATCCTTCTCCAGTGAGCCTTCAGATGAGA
CCNCAGCCCCGNCCGACACCTTGATTTCAGCCTTGTGAGACCCTGAAGCA
GAGGACCCAGCTAAGCCGTGCCCGGACTCCTGACNCACGAAAACTGTGAG
ATAATGTGTGTTGTTTTAAGCTGCTAAATTTTGGAATAGGCAATAGAAAA
CCAACACAGAA
>rnd-6_family-4084#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
GAGGCAATCTGCATGATAAAACCCTTGCCGTTCCCTCCCCCACAAAAGAT
GTCCTGGCCTAAAAATAATCCTTTCTTTTCTTT
>rnd-6_family-1997#LTR/ERVL ( Recon Family Size = 24, Final Multiple Alignment Size = 21 )
TTGACACAGGAGTGGTCCCAGGAGATAGACCCNCAAAGATGGGATTTNGG
GATTGGTTTGGTCATGCCCTTGGGCTTGAACGCAGTGCTGAGCTCCTTGC
CAATGGGAAATGGGATGCTAGTAATCCACGGCACGCAGTGGCATCACGAT
TAATCAAGCTATCACCTGTGGTTGAGTGACGAAACGAAGCAAGTGCCTTG
GGAGCCCAAGTGGCTGTTGCACTTGACCGTTATGGCAGTANTGATGACTA
CAAGGACTTGTGTGGGGTGGATTCTTCTGAGTGCACTGGAGCGCTTACAG
AAAGAAAATGACAAACTCAGGTCTTTTAACTCTCAGCTCACGTCANGGTC
TGAGAACCAGAGAGCTTCCGTGACAGCCCTAAAAAATCTCTTATTTCTTG
TAGCCNCAGGGCCGATATCGCTGAAAATCAAACAAAAATTTAATTGCGCG
GNTTGCNGAATTACAATAACAGTTGAATTCACAGTCTCGCCAAGTTTCTC
GTGTGAAATTAGGGCATCGATTGAGAAAGAGTGGGATCCTGAAACTTGGA
ATGGAGACATCTGNTTGGANCCAGACGAAANTGACAACNTTGAANCCCCA
AGTCNCTCTGAGCCTCCCTTGCCGGCGGAAGCAGCTTGCCCTTCTGTGTC
TGAGGAGACTAGNCTCCCTTGTTTAAAAACCCTGTGGTAACCTCACCTGG
GGCAGTTGCCTTNAAAGGCGATGCTCAAGACCCACCAACGGGGTCAAATC
TCAGCATNCTCCCGAGAGGACAGTGNCTTCNNGAAGACTCAGCTTACACC
ACC
>rnd-6_family-815#DNA/hAT-Tip100 ( Recon Family Size = 25, Final Multiple Alignment Size = 21 )
TGCATGTGTTTTGTAAGTGAAGTCCGATGGGACAACGGAGCATGTGCCGG
GGGCTTGGAGCCTCGGCTCACACGCGGTCCCGTTCCCCCCTCCCGCCTCC
CCGGGACGGGTTCTCGGCCGCCCGCTCCCCAGCCCCCTGGCGCTCCAGGG
CCCCGCCTTCCCTTCCCCCGCCCGGCGCCCACTGCTGCCCTCTGCCCGGT
GCGCATGGGGGCAGGGTCTGTACGCCCCGTGGCGTCTCAGGGCGGGGCGT
GGCGGTGGCCGTCCCTGCCCGGGCTGGCAGCGCCGCGGCGCATTCGGCGG
GCGACTTGGCGGGGGTGAGCCTCTCGCCCACCAGGTACCGAGCGCGTCTC
GCGCGGAGGTTTANAGTCCTTGGGGGTCGCCCGTCTTCCCGTGGGTTGGG
GCAGNAGCCCGTGGGAAGGGGAGATGCTGACTTCCCCGCCCCCAGCCGGG
GCGCGGTGCGTCGGTCCGGNGGCTGGCGGGAGGGGGAACCCAGCAGCTGT
CAGGCTGCTGAGCCTGAGTCGCGGGGTGGGGCCCTCAGGANCCTGTGAGG
GTCTGCACTCGCCCCGTGAAGTATCCCGTGCCAGAAGGAGTTCANCATTA
GAAAGCAACT
>rnd-6_family-8192#DNA/hAT-Charlie ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
CTAAGGNNCACTAGTGTGCCACGAGTGGGTTACAGATGTGCCGAGATACT
GATCCCCTTAGCTCTCGGGGGATGCAGGGCCTGGGGCTGGAGCCAGGCCA
GTCGCCTCCGGCCGCGAGCAGCCTCNTCCATTTACCCCAGTGTGCCGTAC
AAATATTATCATTTCTATGCGTGCCATGACATGAAAAAGGTTGGGAAGCA
CTGATAGGGAGCNAAA
>rnd-6_family-3737#DNA/hAT-Charlie ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
AGTTTCTCAAATGGAATCCTGTGGGCGTGTGTCGCTAGGGGTTCTGTGAG
AGATATGANTGAAAAAATAACCATCATTTTTTGAACTTCGCATGCCTTGC
ATGNTGATGGGCAGTGACCGAGCAGCCCCGTTAGCAATTTGTTAGAGGTC
TTTCGGCCCCACATAGCAGTGCAGTGTAGGANCGTGTTCGTTCGCTTGAG
TCCATTCTCATTTTGTATGCCAAATAGGGGAGGCTGTTGANAGCTGGTGA
GTACTGTATTGCACGAAGTGGAGGAGCGGTAGGCTGATGATATCAGCCTC
TTTCTCAATCACTTCTCCCATCTCCCTTTACGCGCTGAGCAAACAAGTTN
TACCGGTGTAAATAGAAAATCAGAGGGAAATTTTCANTCTAAAGAAGGAA
TCGTTCACGCGCTGCGACTCAGCTGCCCCTCCTGCCATTTTGCTATCATT
GTAAACACTGCGAAACGTGGATTGTGTNGGTTAGAAGNGAATTGTACTGT
GAAGTTTTTGCATTTTTCGCGATTTTCTCGTTTAGTTATTTATTATGCCC
TCTGTNTTATATTTTATTGCATGTGTATTTGCAAACACGTCTGATGGTCA
AAGTGGTGATTTTTGAAGACGAGGTATGAAATGGAAGAGATTTCCAGANC
TAGGCCAACGGACAGTTCCGATAAATGTGATNAAGTGATGAATTACAATC
TTCTGAGTCATTTCGCCGCACTAGTGCAACAAGGGACACAAANGAAGGCC
GTCTTTACAACGAAAGCTACTTATCAATGGGTTTTACAGGCTGTGACCCA
AGNTGTCCTGNTCCATTGTGTGCNATCTGTGGCAAAGAACTTACGAAGGC
AGCAATGGCTCCGGCAAAATTGAAAAATACTAGCTACAAATCACGGCCAT
TTGACAAGTAAAGGTGCTGATTATTTTAAACGGCNTTTGGAATCTCAAAC
AAGCAGTGTAAAGCNTTTGTTAAAAAAAGTCACATTCAGTAAAAAGGCTC
AGGAAGCAANTTATTTAGNAGCAGAACTTATTGCCCAGAAAAGGAAAAGT
TACACAATTGGTGAGAACCTAATAGCATGTAAAATTATAGTGAGTAAAAT
GCNAGGACAAGATGCAGTATGAGAAATTGAAAAGGTTCCACTCTCAAACA
GTATGGNAAGTCGACGTACTGATGACACGCCACNTGATGCTGAAGAGGTT
TTGTATAATAAACTGAAGAACAACAGCTTCTCTATCCAGNTTGATGAAAC
AGATTTCACCAATTGTGTCATTCGTAAGATTTGTAAATGATGGCGAAATT
CAAGAAATCTTNTCTGCTGCAAAAACCTGCCCAAAACAAGCAAAGGCCAG
GATATATTTAATGTTTTGTCNTCATATCTGGAAACAAAGCGTCTATCTCG
GAGGAATTGTGTTGGCATCTGTACTGANGGTGCCCTATCCATGGTTGACC
CCANGAAAGGTTTCGCCTCTTTGTAAAAGAGAACNCTGACGTCGTCACAA
CACACTGCTTTCTTCGCAGAGAGGTGCTAGTGTCAAAAACTCTTGGAGAT
GAAATGGAAAAAGTTCTGGATGATGCTACAAAAATGGTTAACTTTATTAA
ACAAAGACCGNTTCACTCGAGATTNTTTAAAAACGTGTGAAAACCTAGAC
AAGGGAAAATCTCCTNCTACANACAGAAATCCGGTGGCTTAACAGAGGAA
NAATTCTCAACAGGGTGTTTGAGCTGAAAGGGGTANTTTCNAGAATACAG
AAGACCAGATTTTGCTGAATGTTTCGAAGACGAAGAACGGCTGCAGAAAC
TAGCCGAATTGGAAGACGTTTTTCATCACGTNAACCAGTTGAACAAGTCT
TTGNAAAACCCGGAGATAATGTTTTNACCCCAAGGACAAAATCCCTGGAT
TTAAAAGAAAACTAAGTCTTTGGAAAAATCATGTTGCAAAAGGGAATCTT
GAAATGNTTCCACTGCTGCTTGGGCCTGAGAGAGGAAGNTATCAACAAGT
CTCAATCTTGCTGGAAACCACCTAGAAGAACTGAAGAATAAAACTGAANC
CTATTTTCCCTGTCTTAAATACAAGCGNATGACCGAGTAGGGACCCTTTC
TCTCCTNCTGAGCGTGAGAACGCGACTTTGAGAGAAGGAAGAACTCTGTG
AGCTGCAGTCCGATTGCATACTCAAGGCGAGATTTACTGATCTGTCCTGG
ATTTCTGCGTAAGAAGCCTGTCACTCAAGGGAAACAATGAACATTTTGCT
GCANTTTTCAACTTCTTACATGTATGAGCAAGCTTTGTCTTATTTAACCG
AGCATCAAGAGCAAGGACAGAAATCGTCTCATTTCAGTTGAAAATGAAAT
NCGTGTGTGCTTATCTCAAATTTGACCCAGAATTGAATTTTCGTGCGGCA
AAAAACAAGCACAGGTTTCACATTAAAGAGGTAAATTTCATTNTTTATTT
TCAGTTTCAAAAATAACACTTTTAAATGCGTNTATAGGCCTATAAAGAGA
TCAAGAAACCAACACATGTTATAATAATTTTGTAACTGCTAGGTCTATAT
TTGAGCCTGATCATGTCACTCAGTAAGAAAATNTTTTTTCAAAGTCTTAT
ATAAAATCGTTTCTTGAGCTATATTTTTATTCATATTGCTTTGGCTTATG
GTTTTAGTAGCTTTACTATTCAACACTGTCAATAAATTTTCATGTTGTAA
ATAACATTAGCTAAAATAAATTNATAACCTTATTTAAATNAAATCTANCA
AACCCACATTTAGAAAAATTAAATCCCATTTTGGCTTAAACCAGTTANTT
ACAGAAATTTATTATGTTTGCCTTATGAGTTTTTAAATTTATAGAAAGGA
AAGAAAGAGATTAATTTCGAGAAAGGTAAGCTAAGCATAACTTCGCTNTC
TATTTTTTTTCCAANAAAGGTNGGCTGAAAAGTCATTTTTAGTTTTAAAT
AGGAGGGAAAAAAACTTTCCATGTACATGTACCATATACCATATACCATA
CCTCATTAGCATCTTGTATCCTG
>rnd-6_family-6397#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
GAAGGAAGGACAAAGNCATAGGGAAAACAAGNCAGCAGGAANAACAAACC
ANAGNAACAGACCCGCAAAGACTGCAGATATTGGAATTNATCAGATACAG
AATATAAAATNAGCATGTTTAATATGTTTAAAGAAATAAAAGANGGNNTC
GAAAGTATGACGAAGAACAAGAGACTATAAAAATGACCAGGCAGATTTGA
AAGAGAACCAAATAGAANTTCTAGAAATGAAAATGTAATAACTGAAATTA
AAAACTCAATGGATAGGTTAAANAGCAGATTAGACACAGCTGAAGAGAGA
ATTAGTGAACTGGAAGNTATATCTGAAGAAATTANCCGGAANGCAGCAGA
AAGAGAGAGACAAAGAGATGAAAAATACAATATAGTTTAATAGACGTGGA
GGATAGAGTGAGANANTCTAACACAGNGCCACTGCTTATGATCAGAGTTC
CGATGGTAAACAATAGAATGAGGAATAGGCAGGCATCAGAAAATTCCAAT
CTGGAGGCAATAAGCCCAATGAATCAAAAGGAAGATAAAGAAAGTCACCC
CTATTTTAAAGAC
>rnd-6_family-1024#DNA/hAT-Tip100 ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
ATCACAGANACTGGCAGNCTANGCAAGCGGGAAATACAAAACAAGAAGAA
AAAAACTTTAAAATTTTGGCTGCGTAAAAGTAATATTAATTACAGTCATT
TACGTGAACTGCTTACCATTTATGCCTAATTACCATGCAGCGCAATAATA
ATTATGTCATTAAATATGCGTCAGATTAACTTTGTTGTAAGTTTTATTTG
ATTACAACACTAAACTCTGNTCACGTGCGCTCAGCCTTCATAGTNTGTTG
CTCATGNAGCACGGTCGTCCGCTCACAACTT
>rnd-6_family-411#SINE/MIR ( Recon Family Size = 23, Final Multiple Alignment Size = 21 )
TAAGGCAGTGCGGTGTACTAAAAAACACCATGGGCTTGAAATCAAACAGA
CCTGGCATCAATTCCTGNCTCTGCCACTTACTAGCTGTATGACCTTAGGC
AAGTCACTTAGCCTCTCTGAGCCTGTTTCTTCATCTATTAAAACTGGGTC
AATAATATCTGCCATGCAGTGCTGACGCGAGGATTTAATAAGGCAGCAAT
GCGTTAAAAGAGCAANCACTTAGCACAGTGCCTGGNACATGGTTCAAATA
TCGGTAGCAATTATG
>rnd-6_family-454#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
TGGGCTGGCATAGGATGAACTGAGGCCTTCACTTGTATGAAAACCCTCCA
GGTCAAAAAGANAGATAATAACAAGTGTTGACAGGATGTGGAGAAACGGA
AATCTTCATGCACCGCTGGTGGGAATGTAAAATAGTGCAGCCACTTTGGA
AAACAATCTGGCAGTATCTNATAAAGTTAAACATAGAATTACCNTATGAT
CCGGCAATTCCACTCCTAGATATATACCCAACAGAAATGAGAAAATNTGT
CCACNNAANTATNTGCACNNGAGTGTTCATACAGCATTACTGATAACAGG
CCCAAAATGGAAAACCCAAATTTCTATCAATTGATGAATGGATTAACAAA
ATGTGGCACAGCGATTGAATGAAATATCTTTCTGGCAATAAAAAAGAATG
AAGTACTTTATGACACATCCACAACATGGATGAACCTTGAAAACATGCTA
AATGAAAGAAACTTAACACAAAGCCCACATACTGTATGATTCCATTCATA
GGAAATGTCCAGAACAGGCTAATCTACAGAAGCAGGGAGCAGNTTAGTGG
TTGCCTGNGGCTNGGGGTGGCGGTGGGGTGAGAGGTAAATGGGAGTGACT
GCTAATGGGTATGGGGGTTCTTTTCCGGGGGTGACGAAATGTTCTAAAAT
TGATTNTGGCGATGGTCGCACAACTCTGTGGATACNAAAAATCATTGAAT
TGTATACTTTCAATAGGTGAATTGTATGGTATGTAAATTATATCTCAATA
AAGCTGTTAA
>rnd-6_family-1518#LINE/Penelope ( Recon Family Size = 27, Final Multiple Alignment Size = 21 )
TAAGACCCTATTGCTGATCCAACAAAGGCCCTGATGCANCTCCTACATCA
TGCCCTGACANTGTCCCCAGCTAAGGGCCTGACGCTAGGCCTCACTCAGT
CCCTGTCGCTCTCCCTAAGTCAGGCTCTGACGCTGTCCCTACCTGAAGCC
CTGACACTGGTTCTAANTAAGGCCCTGATACTCTCAGTGACTAAGGTCTT
GACACTATCCCTAGGTCATTTCCTGACACGATCCCTAAACTTTACCCTAA
NCCTGTCCCTAGCAACTGTCCTGCCTCTTATGCTAACTGAAGCCCTTATG
CTGTGAATACCTCAGGCCCTGAATTTAGTCCCAAGGCCGTGACACTGTCC
CTAACTGAGGCCTAGATGCTCNTCCTAAATCCGGCCCNGACACTGTCCCT
AACTAAGGCCCTAACACTATTCCTAACTCAGGCCCTGACACGGTACCTAA
CAGAGGCCCAGACGCTAGTCCTAACTNAGGCCCTGACGCTGTCCCTAACT
AAGGCCCTGCTGCCGTCAATATCTAAAGTCCTGACATTATCCTGAGCTAA
TATCCTGACCCATGTCTTACCAAGGCCCTGAAACTGTCCCAAANTAAGCC
CTGACGCTGTCCCTAAGTGAGGCCCTGAGGCTGTCCCTAACAGAGGCCCT
GAGAATGTCTTTAACGAAGACCCTAAGGCTGNTCCTACAGAGGCCCTTAT
ACTACTCCTAAGTCATGCCCTGACACTGTCCCTCACTCAGNCCCTGAAGN
TAGGCCTCACTTAGGCCCTGTCGCCGTACCTNAGTTAGGCTCTGACGCTA
TCCCTACATCAAGCCCTGACACTGGTCCTGACTAAGGCCCTGACACTGGT
CCTAACTAAGGCCCTGACGCTCTCAATAACTAAGGTCTTCACGCTATCCC
TAGCTCATTTCCTGACGCTATCCCTGACCTGGAANCTGACTCTGTCCCGA
GCTAATNCCCTGCCTCTTATCCTCACNGAAGCCCTGACGCTCTCCCTAAC
TAAGGCCCTGACTAGTCCTAACTCGGGCCCTGACACTGTCTCTAACTAAG
GCCCGGAATCTGTCCCTAATATAGGCCCTGCTGCCGGCAATAACTAAAAT
CCNGACACTGTCCTTAACTAAGGCCCTGACACTACTTCTAACTAAGGCAC
TGACACTNTCCCTAAGAAAGCCCTGACGCTGTCCCTAACTGAGGGCCTGA
CGCTGTCCCTAACTAAGGCCCTGANACTNTCCCTAACTNAGGCCCTGACN
CTGTCCCTAACTAAGGCCCTGACNATGTCCCTAACTNAGGCCCTGACGCT
GTCCCAACTAAGNCCNTGACGCTACTCCTAACTCAGGCNCTGACACTGTC
CCTAACTAAGGCCNTGACACTACTCCTAACTCAGGCCCTGACGCTGTCCC
TAANTCAGGCNCTGACGCTGTCCTTAACTGAGGCCCTGACACTGTCCCTA
ACTAAGGCCCTGATACTCTCAGTAACTAAGGCCTTGACACTGTCCCTAGG
NCATTTCCTGACACTATCCCTAAACTCTACCCTAAGCCTGTCCNTAACNA
NCGTCCTNACTCTTNCGCTAACTGANGCCCTGATGCTGTCCNTACCTNAG
GCCCTGACNNTGGTCCTAAGGCCTGACACTGTCCCTAACTAAGGCCCTGA
CGCTATCCTAACTCAGGCCCTGATANTGTCCCTAACTANGGCCCTGAAAC
TCTCGCTAACTCAGGCCCTGACACGGTNCCTAACAGAGACCCAGACGCTG
NCCCTANCTAAGGCCTTGACACTGTCCCTAACTAAGGCCCTGCTGCCGTC
AATATTTAAAGTCCTGACGGTATCCTGAGCTTATTATATCCTGGCCCACG
TTTTATTAAGGTCCTGAAACTGTCCCAAAGTAAGCCTTGACGCTGTCCCT
GCGTAAGGCCNTGANGCTGTCTCTNACAGAGGCCCTGACAATGTCCTTAA
CAAACCCCTTACGCTGTTCCTACCGAGGCCCTNATGCTGCTCCTAAGTCA
CGCCCNGACACTGTCCCCAGCTAAGGCCCTGACTCCAGGCCTCACTCAGN
CCCTGTCGCTCTCCCTAACTCAGGCTCTGACGCTGTCCCTACCTGAAGCC
CTGTCACTGGTTCTAAATNAGGCACCGATGCTCTAAGTAGCTATGGTCCT
GACACTATCCCTACGTCATTTCCTGACGCTATTCCTAGACCTTAACCTAA
CCTTGTCTTTAGCTAANGTCGAGTCTCTTATGTCCCTAACTAAATCCCTG
ATGCTGTCCCTAACTAAGGCCCTGAATTTAGTCCCGAGGCCATGANCCTG
TCTCTAACTGAGGCCTGGAGGCTGTCCTTANCAAANGCCCTCAACTTATC
TTTAACTGAGGCCCTGACACTCTCCCTAATTAAGGACTGAGGCTGTCTCT
AACTAAGGCCCTGAGTCTGTCTTTAACTACTGGCCTCACTCTTTCCCTAA
CAAAGGCCCTGACGCNTTCCCTAACTAAGACCCTGACANNGTCCCTAATA
ACTCGAGCTGTCCNTAACTAACGCCCTGACGCTGCCCCTAANTGANGCCC
TGACCGGCGTNAAGTTCCAGACACGTCACTAACGACCCGAAATGTCTCTT
ACTAAGGCCCTNANACTACCTCTAACTGAGGCCCTAAAGATGTCCATAAC
TAANGCCCTGACGCTGTCCCTAACTAAGGCCCTGAAGCTGTCTCTAACTG
AGGCCATGACAGTGTCCCTAACTAAGANCCTGACACTGTCTCTAACTAAG
GCCCTGAGTCTGTCTTTANCTAANGCCCTCACNCTNTCCCCAACTACTCC
CTGACGCTGTCCCTACCAAGGCCCTGATGTCTAATGCCTGAGCTGTCCNT
CACTAATGCCCTGACCCTGTCCATAACTAANGCCCTGATGATGTCCCTAA
CNAACGGCCTGAAGTGTCTCTTACTAAGCCCTCAAGTTTTCTCTGAGGCC
CTGACACTCTCCCTAACTAAGGCCTTGACGCTGTCCGTAAGTAANGCCCC
GATGCAGCTCCTACCTGAGATCCTGACGCTCTCACTGAGTCTCTACCTGA
GAAGCTGACACTGTCTTAACTAATTNCCTGACTCTTTCCCTAACTAACAC
CCTAATTTTGTCCCTAANTAACGCCCTGACACTGGTCCTAACTACGGCCC
TGATGCTGACCCTATCTAAGGCCCTGACGATGTCCCTAATAGACTTNGAC
TGTCCCTNACTGNGGCCTGACCCTGTCCCTCACCGAGGCCCTGACNCTCT
CCCTAACTAAGGCCGTGACGCTGTCCCTACCTGAGGCNCTGTCACTGTCT
ATAATAGGCCTGACGCTNTCCCTAACGCCCTGACGCTGTCCCTAAGGCCT
CATGTATCTCTAAATAANGCCCTGATNCTGTCCATAACTAAGGCCCTGAN
GCTGTCCCTACGTAAGGCTCTGACGCTGCCCNTAACTAAGGCCCTGACGC
TNTCCCTAACTCAGGCCCTGANGCTATCNCTAATAANGCCCTGACGCTGT
CCTAACTAANGCCCTGACGCTGCCTCTAACTCAGGCCCTGANACTGTCCC
TAACTAAGGC
>rnd-6_family-1325#Unknown ( Recon Family Size = 22, Final Multiple Alignment Size = 21 )
GAGTAGTAAAGGAGACACACAGGAAAGAAACACACAGTAGGGAAGAACTG
GGTTTTTCCCTACACAGGAAGGAAAAAAGCTGAGG
>rnd-6_family-959#Retroposon/SVA ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
GTTTTGTTTGTGACCNCAGGTGCAGAGGGTTGAGTTAANCGCACTCGCTC
AGTTCACGACATATCATCATTGGTCCGCGCAAGGCCCCTCTCTTANTTTA
TTTTTATATTTATTCCCTTTTATCCCCATTCCCAGTCCCATTCCCCTCCC
TCATAGGCAACCATTCTAATGTGTTCAATGTATATCTTTTAATNTGCATG
TATTTTTGCAAAATATGTATTGTTTTGTGTGTATGNATTTTTAATTTTAC
GTAAATGGTATTGTGTTANATCTCATTCTGTTTCTTACCTTTTCACTCAG
CACTNCGTTTTCAGATCCGTCCATGTGCTNCGTGTACGTCTAGTCCATTG
CTTCTAACTGCTGCTCAGTNCTCCATGTGTNCACTGCATTTNATAACTCT
CCGCTNTCCCGGCGATGGGCATTCCCTGGATCCTCCAACTCCCCATCATC
AAATAATGGACACTTGTGCATGGTCCACTATGGACCTNTG
>rnd-6_family-3580#Satellite ( Recon Family Size = 34, Final Multiple Alignment Size = 20 )
ATCTGAAGGCTTTACCGCATTNNTTGCATTCATAGGGTTTCTCTCCAGTG
TGGATTCTCTNATGTATTGAGACGCACTGGAAAAGTAAAGGCTTTCCCAC
ATTCCTTACATTCATAAGGTTTCTCTCCNGTGTGAGTTCTCACGTGTCTC
CGAAAGGTTGTGAGCCACTTAAAGGCTTTCCCACATTCGTTACATTCGTA
GGGTTTCTCTCCAGTGTGAATTCTCTNATGTCTNTGNAAGGTCGTGAGCC
ACGTAAAGGCTTTCCCACATTCNTTGCATTCGTAGGGTTTCTCTCCAGTG
TGAATTCTCTGATGTNNNNTGAGGNNTGAGCNATGACTGAAGGCTTTCCC
ACATTCATTACATTCGTAAGGCTTCTCTCCAGTGTGAATTCTCTCGTGTC
TAAGCACTGAAGATGACTGAAAGCTTTCCCACATTCNTTACACTCGTAAG
GCTTCTCTCCATGTNTCTGATACTCAGGTTTNTGCGCAGTGTGACGTTGA
GCCTATTAAGGGATGACGTTGCTGAAGACTTTTCCACATNCACTGCATTC
ATANGGTTTCTCTCCAGCGTGAACTCTCTTGTTCAGAATGAGGTGGAACT
NTGGCTGAAAGTTTCCCCACATTCTCTGCACTCACAGGGCCTCTCTCCAG
TATGAATTCTGAGAAAAATGAGAATCGCGTTANTAACGATTTATTTCAAC
GATTTTATATTTGCAGTAGGAATTTGCCACATTTATTACGATCGATAGNA
ANANTGTAGGTTNTCTNNCTTGTNTGAATTGTTNNNGATTGAATATANNG
AATGCCCCGCAACGAAGACTNCNCCCTTNGAACTATCGAAACANTGATAT
TCANATACAGGGCTTGTTAATACTGCTTNCAAGNGAACTATTTTNCAAAC
ACTGGACATCTATGTNACATNTNAGAAAGTATTTNNGGGANAGNCTTTCT
GAGAATAANTAAATNNNAAGNAGGCGCTATNTGCTTNGNTTGCNCNTCTT
TTAAAATTTCGTNACGTACCAGGACCCTCACGTGAGNCANNGCTTTCTGT
TGTNAGTGTGACTTACCTTGGTTTTCCCCCCTGGTTTTTGTACTGNTCTT
CAATGTCATNATCNTCCCATTTTNTCCCTAAANTGCAGACGCAGNAAAAC
GATTCCAAAGTATTGGAAATTANAGAANNATTATTNGACTCTATGTNCAT
TGTTGGCTGTGACCANGCCTGGTTTATATACCAACATCCTCCCTTCTCAC
ATNANACANCTTAGAAGACCATCAATGAGCAAGAAGCATTTGNTCCCTAN
CTGANNAANTGANGGAAAGCCGCCACCCTTACCTACTGAGGCCAGGTTCC
TGAAGGTTTCCCGCATCACATCTCTGTAGAGTTTCTTCTGTGNAGGATTC
AGTAGAGCCCACTCCTCCAGGGTGAAGTTCACAGCCACATCCTCANNGGC
CACCGAGTCCTAAAACACCCCAAGTATGTGTACAGCAGGATGAGTGACAC
TGACAGNACTGGACACCTAT
>rnd-6_family-7167#LTR/ERVL ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
ATGTAATTTTTTTTTAAATGCTGTCTTGACCCAGTTTTGAGGCCCTGGCT
AGAGGCCGGTCAGTTCCCCTTCTTGAGCAGCTGATTAAGTCCACACCCCA
ACCACTCCCGCACTCAGAGGCCACTATGCACCCACCNTCGTCGCCCCGGG
NCCAGGTACCAGACAACGATGGACAGCCCCTATGCCCCGGAGCCCAGAAA
TTATTCAAATTAGCCAATCCACAGGAGCCCGTGAAACCTAGCTAACCCCA
NCCCGCTTGCCATACACAGCTGCCCCCTACGNCTCCAGCTTGCTGTTACC
CTGTCCCAGGTGCAACTCCCTGCGTGGCCCTGCGTGGCAGCCTTCTCTCG
TTCGGAGCTGTAAGTAATAGAGTGTTGCCTTTCGTCTATCCGAGTGTCAC
TGTGTTGTGTTCACCATCAAAAGAATCTTTAAGCCTTATAAAA
>rnd-6_family-458#DNA/hAT-Charlie ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
GATGNTCCTCTGNGTGCCACAAGCGACCCGTCTGTNGCACTTTTCTATCA
GATGTGGACATCTGACCCATGCTGTTCTTCATGGGCGCAATGAAAGTGAN
CGGTGNGATACCCNGCANCTGNGTGCCTNCTCCAGCCGCCGGCTGCAGCG
TCCTCGTCTGCCCATCACGGACAAGGAGCCTANGGAGCCGNTGGAGTTCA
NGTCCCAGATGCCCAGGGGCACCGNGNGCAGCCCGAAGGCGTGTTCTAGC
AGGAGAGGGGNGGGGAGCTGGGCGGGGCTAGTTCCGGCGGGAAGTAGCTC
AGGCAGCGGCCCTCGACCCTTGNTTTCACGTATNTCGGATACTTCTGTCC
GTTCGCGGTTGATGCTACCCTTTCATGGCATCCAAGCCAGCTGCAGGGTG
ACCGCTTTAACAACGCATCCGCGTTCTGCAAATTAGAGCGTCATCATTNT
TTGAATNCTTGACATAAAAAAGTTCGATTGGATTCGAAATCCGTTTGCAT
CATCACAAGAANTTTCAACATTACATTTGTCAATGAAAGAAAAGGAAGGC
TGTTGATNCTTTAAATACAATTTCAACTGTTACAAATTTTTACATGGTTA
TAAAAATGGTTTTAAANTTTTTATTATATACTTGTGCGAACAAAGTTTCT
CATCGATGGTGACCATCAAGAATTTGAAGNTATCATCATTAAAAGTCTTG
ATCAGGAATTGTGTGTAGCCATTTCAAGCATAAAACCTGATATAAAAANT
TACGTTCATGGAAGCAAGACTCAAGTTTCTCATTAAAATTTGAAAATATT
TTATTCTAATTCAATATTTAATATCTTTCCTAATACTNTGTATTTTTTAT
CATAATTNTATAATATAAAGAAAATGTAATTTTTTTTCACCAAGCTCCGT
ATAGATGCCCCCAAATCCCCTCCAGTTTACTCCAGTGTGCCGTACAAATA
TTATCATTTTCTATGTGTGCCATGACTTTCAGTGTTTGGAGAGCNCAACT
CTAAAATATCTTGCTTGATCTTCATGGA
>rnd-6_family-3934#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
CAAGGANTCAAGGCCACCAAAANAGAAACCGCGGAATCAGACTNACAAAG
AATTCCAATACTGGAATTATCAAACNCAGATATANAATAATTTGGTATTT
AATGTGAACTTAAAGAAATAAAAAATGAGATNAAATTAATGAGAAGAAAC
TTTCAAAATATTTGAAATTAGAAAATAGAATTTCTAGAAATAAATATAAT
ANTTGAAATTAAAAACTCGATGNATAGGTTAAACAGCAGATTAGACACAG
NTGAAGAGAGAATTAGTGAACTGGAAGATAGATCTGAAGAAATTACCCAG
AATGCAGCACAGATAGACAAAGAGATGGAAAATATGAGAGGTTAAGAGAC
ATGAGAATAGAGTGAGAAGGTCTAACATATGTCTAANCGGATTCCCAGAA
GGAGAGAACAGAGAATGGAGGAGAAAGGCAATATTCGAAGAGATAATGGC
TGAGAAATTTTCCAG
>rnd-6_family-326#LTR/ERV1 ( Recon Family Size = 30, Final Multiple Alignment Size = 20 )
AGATCACGGCACCCGCTTCGCTGGGCAAATCCTACAATCCTTCACAGAAG
CTCCTGCAAACTTTTTGGAACCGTCACTCGTCCAGTCACGCTCGATCATC
AGGCAAGGTCGGCAGAACCGATGGAAAGACTGGACTCCAAGGAGAACAAG
GATGACTTACACGGGATTGAATGAACTGATGAACAGGATGATAATGTGTA
TGACTACTTGTGTAA
>rnd-6_family-9925#LTR/ERVL ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
ACACCACCAGTAGATCGCGTAGCCCTCAGATAACTGCGAAGATCTCTCCA
AAATGAGGCTACCCTTGGTTACTCGGGGGAGCTTCCCGGAGGGATAACTG
ACTCAGTTATTTATGTGCANCCTGCGGGCAGTTATCCCTACAATGGGAGT
CATCCAATTAGAAAAGGTGGTACGAAATTTGTCCTGACTTTAGCTGAAGA
TCGATGACATCGCCTCGGCCCTGGAAGGCATTCAGGTCAGCCTCAACTCA
CTGGCCAGGGTTGTTACGATGATAGAATCGCCCTAGACTTCCTCCTTACA
GGCCAAGGCGGAGTCTGTGCAATCGCTAATACATCCTGCTGTACCTGGAT
TAATGCCTCGGGCCAAGNGGAAAGGTCAATACAGAAACTTAAGGAGAAAG
CCACCTGGCTTTCTAAGTAGACCCTGATGGTTTATGGGATTTGTTCAGCT
GGTTGGGTCCGGGACCCTGGGGGCACGGTTGAGGTCAATACTGCAGGTTG
GCCTCATCCTGCTGCTTGGAGTCCTGTTGATAGTAGCCTTAATTAAATGC
TGTATGAGACAAATTGAACGGATTTGGTCCCAGCCTCTGTCGGTCAGATT
AATCAGAGTGGCCAACGGAGTGGCGTACTCATGGGAAAATTCGCCAGAAG
CCAAGACGGTGTAGAAACGAGAAGTGG
>rnd-6_family-416#LINE/CR1 ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
AGGGCTGAAGCCCGCAATGAGTTGAAAAACTGCCAAGGACAACANAAAGT
TTTTTTAAGCTCTATTCAGAGAAGAAGAACGAAGGGATAGGCNCACTGCT
TGGGGCAGACGGTGTAATGTTAACAGATGACGGAGAGAAAGCAGAACTAC
TCAACTCCTATTTTGCTTCCGTGTCTCTATCAAAGAGAATGATCTTCAAA
CTGGAAAGGGCAGAGCAAACACGGTTAAGAGGAACTAAAGCCCAAGATGG
GTGAAGATTAATNAGAATATNACCTAGCTGCTTTAAATGAGTTCAAGTCT
CCGNTCAGANAAACTGCNTCCCAGGATACTGAAAGANCTTAAAAAAAGCT
CCAGATGCAATTGCT
>rnd-6_family-5949#LTR ( Recon Family Size = 21, Final Multiple Alignment Size = 20 )
AGGCCTGTTTCCAATGCTCAGCACACGGGTGCGCGCACGTGCACACGTGT
NCACAACAGCTTGGCGTTNNCCATTNTAAACTCCCGGCGCGGCATACCAC
TGCTCTGAAGTGGGGCCTTTGTNATNAAGGAAATGGCTCTNNTTCTCAGA
GCAAAGAGATATTGGGACACGTCTCGGCAAAAGAGATAAGAATGGTGATG
TATTTGATGCTGGGCCCTCTGTGCCTGTGCACTGTTTTAAATTCCCATAA
CTTACTTGAGACCTCACCAGTGTTTCAATTCAGNCAGTCCCGGCTCCCCA
GNGCTAGCCAATAGTCCATCCATCTCCCTCCNTGCTTACTAGCAACTGGA
GGAACAATTGTATCACATGCTTGGACTGANNAATGAATAAGNGTCCAGGG
GCCATTTGANTGGCAGCCTTCCAACTCTGCAGAAACTATAAAACTGACCA
AAACAAAGACGTTGGTGGAGACTCTGAGAGTCAGGACTCTAGATCCACGT
GTCACCCCCATCACAGCACCAGCCTCTAAGTTCCCTTTTCTGGCTGCGCT
CCGGGGCCTGGATNTCGGACTTTGGTGATAAGAGCTGTGNCAAGTAGAGA
GGAGCGTGGNGAGNTCCTGGCGTCTGAGGCCACCACAAGCTGGGNCCCAC
GTTTGCTGATGCGTATGGTATTCCTGCTANAATAAGTATCCTTTTAGTTA
AAAGCANTAAATCTCTTCTTGTTTAAGTGGCAGGTGGTTGGGATTGTTAC
TTTTGCTTTTGGCAAACTCATNAGAGGAAAAGCGAACCCACGTGTGGTCT
GGAAGGACAANGGGTGAGTNCTAAGATCNGGACATAATCCCTTAGCCAAG
GGT
>rnd-6_family-6127#LTR/ERV1 ( Recon Family Size = 24, Final Multiple Alignment Size = 20 )
TATGGCCACTGCCCTTTCGNTTAAGGCCACTGAGAAAATCGTCGTGGGAT
CCCCTTTAACCATTTTGTACCNCACGCAGTNGAAGCTCTCCTGAACTCTC
ACCACACTCAACATTTCTCAGCCAGCCGCCTCACCTCCTATGAAGTCCTT
TTGCTAACTGTTCTCACGTAACTCTTTTACGTTGTAATAACCTTAACCCT
GCTACTCTTCTCCCCTCCGTCACCGACGAAGTCCCTCACGACTGCTTAAC
GCTGACGGACCACCTCCTGACTCCTCGTGATGATCTACAGGAAACTCCNC
TGGGTAACGCTGATCTCTTATGGTTCACTGATGGTTCCTACTTAAAAGGT
GAGAACGGNAAATATTGTGCTGGGTATGCTATNACAACTCCTTTTGACGT
TGTTGAGGCAGCATCTTTACCTACGGCCAACAGGCTGAATTATACGCTCT
TACNCGGGCTTGTACTTTAGCCAAGGACAAAACTGCCAATATTTATACTG
ATAGTAGATATGCTTTCGGAGTAGCTCATGATTTTGGAATGTTGTGGAAG
CAACGTGGCTTCCTTACTTCCAGTGGAAATAAAATTNAAAATGGCCCCTA
TGTTCAGGAATTATTGGATGCAATACTTTTACCTGCCACTTTAGCTATTA
TTAAGATTCCGGGGCATTCTAAACTTGACTCTCTGGAAGCTAAGGGAAAT
CACCTTGCTGATACTTCCGCAAGGAATGC
>rnd-6_family-3752#LTR/ERVL ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
TATAAGAGTTGATTTACAGCTGGACTGGGANAGCTCTGCTTATCTCCGGG
GATGCCTGGAAGTCTGGCGCTGAACCTTTGGCCAAGATAAGGATGAAATG
CGCTAGCTAGTGATTTATAATGTGCTGTTTAAAGTCCGAAACTCCCCTGG
NGGCACCCNGNACTAGCTTGTCTACATTGTTTACGATATATATGTACTTA
CACAGCCTGGTTTGGCTACGTGACCAGAGGGTATAAAAGTCCCCTCCGGG
AACTCGTGCNTTGGCTTCCCTGAAACCAAGATNCCTCGCACGTATCTTGG
TGGTTCATAATCCGGAGACGAAGCGTGTCCTGTGCGACTGAGAAAGGACC
CTGGGGGGCTGCGCCTGGANGTCTTCGGCCTCTCGATGCTTGCCTGACAC
TTTCTCCTGCTAGTACCCTTTACCTTTATTAAAGCCTTACATGAGTATGC
CCTGTGGAGTCTCGTGAGTNCTTTCAATTATCCGANCNTGTGTAACTT
>rnd-6_family-3039#rRNA ( Recon Family Size = 20, Final Multiple Alignment Size = 20 )
AAATAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCAC
TTTAAATCCTTTCGCGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAG
CCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAA
AAGCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGAGGCGA
GCCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTT
AGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGT
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA
TAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAA
GAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTG
GACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCA
TTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTA
GTTCCGACCATAAACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCCG
GGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGNTTG
CAAAGCTGAAACT
>rnd-6_family-2911#DNA/hAT-Charlie ( Recon Family Size = 22, Final Multiple Alignment Size = 20 )
TTGTTCTGACAGCTAATGTGTATGTTCTTGTGTTTTCTAGAATTTTCTAA
GGTAGTAGGTTTAGGGTATAAACATGCGCGTTTTCAGAGATTAATTCAGT
TTGTTCTCAGTGCTTCTACTGTGCTCTTACTAGCTATCTTTAGTTATACC
TGCTATAATCTCTGTAACCTCATTATTATCCAATAAATCGTNATTTTGAA
ATCCTAGAGTTTTCCTTGNGCCTANGTGGAAACACAANAAGTAAGTACAC
TTTGATTTTGTCTTGTTTTGCAGTAATTATTTTTTGATTTTCAAAAACTT
CTAAATTTTTACATTTTATCTAAAACTTNTAATTTTANAATTTAACAATA
TTTTNTACGAAAATAAAATATATTTATATTATTTCTTATNTTTAAAGATG
GATCATTGGCTTAAAAAGGGAGATTAGAAGACTCGCTTTCTCAACCCACA
GCTGCACCGTCTACATCTAAAGATGCTGAAAAAGATGAAACTGAAACACC
ANAGAGTTCTCTGACTCATGGAAGGGAGGAATCTACTCCAAAGAAACTNG
GCGAAACTNTAAATAAGAAAAAAAGTACGACGAAANCTATTTCTCTCGGC
TTCATAGATGTCAATAATTTACCTTATTGTGTCTTATGCAACAGAACATT
TTCGNATAGTATCATGGTGTCAGTTTAGTTGCGACATCATTTTGAGACCA
ATCATTCAAGTTTAAGGAAAAAGAATTGAATATTTTAAACGTAGACGTGA
TGAGCTCTTTAAANCCAAAAATTGTTTGTTACAGCTTTCAAACTAGAAAT
GAAAAGCCACCGAAGCATCTTACGGGTAAGTTATCAATGCATTGGCTGGA
GAAGCNCACACAATAGCTGAGAGACTAANAAAGCCTTGNACAGCTGACAT
TGCTGAATGCCTACTGGATGAAAAGTCAGTAAAAGAAATAGCAGTACGCC
NCTTTCCAACGATACAGTAACTCGTCGAATTAAANATTTAGCTNCAAACA
CGAAGACTGAGTTAATATCTCGTCCTCAGAACTGTACTTTTGCCTTACAA
ATGGACAAA
>rnd-6_family-496#LTR/ERVL-MaLR ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
ACTCCAGTTCTTCTCCTCTCTGGGCACACGGNAGGNCTACACTTCTCACC
CTCTTGAAGTTAGGCGTGGCCATGTGACTTGCTTTGGCCAATGAAACGTG
AGCGGAAGTGACGTGTCACTTCCGGGTGGAAACTTTAAAAACCGGTGCGA
TTTGCCACCTTT
>rnd-6_family-10788#Unknown ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
GGCCCCTAGGTACATGCTTTTATGTATTTTTAATGGTTNATTTTTCCCAG
AACATTAAAGTAGTTGAAAAAATATTGAAAAATTGAAAAGTAGGTGTATT
AAAACTCACAACATTATTTTAAGTTTAAATATTTTATTTATACCCAAANC
AGAATTTATTATAATTTTACTTTCCTGGCTTTAATGGAAGCAAACTCATC
GATAAGACA
>rnd-6_family-5486#tRNA ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
GGCATTGGTGGTATAGTGGTGAGCATAGCTGCCTTCCAA
>rnd-6_family-6554#DNA/Crypton-H ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
ACCTCACAAGGGCTGCCGAGAAGACTGAAGAGACAACGTCCACAGAGGCT
TAGTGNAGGCCGTGGCCGTAGTGAGCGNTGGCGGCGGTGGTGGTGGTGGT
GATGGTGGCGGTGATGATGATGACGGTGATGATGGTGATGGTGGTGATGA
TGACGGTGATGGTGGTGATGACGATGGTGATGGTGGTGACGGTGATGATG
GCGGTGGTGATACGGTGATGGCGANGGTGATGGTGGTGGNGGTGATGGCA
GTGATGGTGGTGGTGACGNTGGTGATG
>rnd-6_family-426#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
AAAAGCTAATTTTCAGTTGGTTGGCCGAGAACAAAAAAGCGAAGAATACC
TAGTGCAAAATCATATCTCTAATAACTACTGTTGGATTTAGAGCACACAC
ATGCTAAACTTATTTTAAAATATCTTCTTATCAAAGATTTGAGGTTGGAC
CTGAAAAAATTATATCAGAAGTGAAAATAATCATGTGGTCTGACCAGCGT
GGATCACACAAAGTAAGTGTATACTATGTATAAAGTAGATAAACTACGAG
GTCCTGCTGTATAGCACAGGCAACTATATTCAATACCTTGTAATAACCTA
TAATGGAAAAGGATCTGAAAAAGAAATATATATATCTGAATCACTTGGCT
GTACACCTGAAACACAACATTGTCAATCAACTATACTTCAAGTAAAACAA
AACAAAACAAAACAAGTAAGTGTAAAGGGAAGTATAGTTTTATAAATTCA
CCTCTGATATCCAATGGACCAACTGAAAGACAACAGAAANTACAACTTTC
TAGGAGACAGGACATGGCCAGCAAACNAGGCCGTTACCCTCGGTAACGGT
CATACCTGCCAAAAAATATACAGACTAGCCTGCATTCATGAATACATAGG
AATTCTTCATTTATCTGGCATTGTTAGGCAATGAGGTATTGTATGTTAGG
AGAAGTTTTTTTTAAATGACAAATTTAAGAGGAGTTATTTTAACCTTCAC
TCGGTAATTTTTTTCTAAAATTAAGAAATGTATCCACTGGTGTATCTAAT
GTTTCCGTGATAACTCGGGGTCATCAGTTCAATCAACGTTTGCATGAATA
ATGCGAATGGAAACAAGACAGGCATGCTTACTGAAACTGAAAATGACATG
GCACTGGCTGGAGTAACTGATGAGAGAGCAAGAAAAAAACAAAAATGAAA
ACAAACCGTGATCAAGAAACAATCAGTCAAGTTCTGACTTTCTGTACTTA
GTTTCAAAANGAGATACCACAAATCCCAGCGAGAGACTCCAGCATCATTA
GCTGTCTTTCTCCTTTGTTTCCACCTTCCTTTCCTTTTCCTTCTACCCTA
GATTGTTCCAGGAAGTGTTTATAGCTCCTTGCAAGACAAATTCTAATACT
TGCTTTCTCTCACACAAACTTCACAATATGTCCATGTGATAAATGGTGTG
GAGGTAAAAGACAATTCATCACAGGGACATCTCCTATGAAAATAAAATTA
GAAACTAGCTTCTAAACATGCAGAGAGAAGGGCGTGGTGTCAGGCACTAA
TTTCCTTGCGAATTCCTCTCCATTTCTAATAGACGTTCTTCTTTACCAAG
ATCCCTTTTTATTGGTGTCCTATTCCAGACTGCTCCACTCCACCCATCCT
CCACTCCACCCATCCTCATGTGTAAAACACATTCACACTCTTTTGTGACC
CTACTTATTTGCCCATTAAATAATCAATCATAGAACTGTCGGAATTAAAT
ATAGAGTGAAATTAAAATACTGGAGTCACTTGGAGGGTTTAGCAGCTCCA
CCAGAAAATACTGGGCATGGATTTAAAAGAGGCTGCGTGGGACTTGCTCT
TGTCCAAGTTCTTTCTCAAGAAGTATCTGAAATAAGCCTAAATTCAGAGT
TAATCAGACTGGCCTGCTTTCTCAGGTGGACTGGAACTCATTGCTCTTTC
CCCTCAACTCCCTGATGTCAGTGGCACTTTCCGGAGGTGAGGTGGACTTC
TCTGCCTACTGCAGAAGCNCAGTTTCCCCCCGGGCCCACTCCCTGTCTGA
ATCCCACACTNGAGGCCCGATGCCAGCCTTCCCAGAACATTCGTGGTCCC
CTTTCAGTTTTTGACCTGCTCAGATTGAGTCCCTGTAGNCTCTTCCTCAG
CTTGAAACCTGATCTTCCACACCTTTCCCTGACCTCGATGGTTACCTTCC
TACTTTAGGCCTCAGGTGCTTTANCTACAAAATGATATANTTNCCCTTAA
TTCTAAAGTCTTATTTCTAAAGCTCTACAATGTGGTGGCTCCTTGAAAAT
GTTTCTCTTTGCTGGTTTTAATTTTGTAGAGAATTAAAACCCCAGCCACT
CTAAAAGACAGTAAGTTACATTGGATAAGGAAAGTGTGCTTTTGTANTTA
GANTAACAGGGGTGGAAGACGACTTAGTATGTTTTAAGATACTCATGATC
CATTCTCGTGAGAGTCGGGGGAAGAAGGGGAAGAGAGTTAATAAAATACC
GAACGATCGTGACAAATTAAGTTCACCAAGATGTAGNTGATTAGTTACTA
CCTGAATAAGCCACACAAATCCAATTCAAGTTGTCCTTTATTTTTCTAAG
AAGGATCCCAGTGAACTGAGTCCCATGTTCAGTGACTCCACGTTCAATGG
CTTAGTCTTTAAAAACTGTTATGTTGCTGGAAGAAGAAATATTGCCCATC
AGTCCTAATTGATGTTTAGCTATCACGCACATTTGAAATAAATTTATTAC
TTTGCCTGATCTCAGTGTAATACATTCCAAAGTGGCAAAGAGCACACGAA
AAGTTATGGAGTCTCCATCTTCTACACTAAAGTGTGCAATAAATTACGTA
TTATTTGGCCGTGAAATTCACAAGCCATAGAAACCACGCCATTAGCAATG
TATACAGTGGTAAACAGCAGGTAATGAGAATGATATAAAACAAAACAGAC
TGTGTATGTTGGCACTGCTGCCAATAAAGCAATTATTAAATGCATTCATA
TGCATCTACGCTAGGTAAGCTCTTTGAGGGCAATGCTATGAATTCTACAT
ACCTGTCAGGATATTATATATAGACCAGTTTCTATGGCCTTTATTCAAAG
ACGCTGAGAAAGGGTTACTCTGGGTAAATTCAGACCTTTTCTCAATATAG
AATTTGGTCAACATGCATTCTGAACAGCAAAATTTCACAGTGCTTTCAAT
TTTCCTACACTAATTGCCACCTCAGCAAATGCAGGATTAAGTATAATGGA
TTATAAGAANTTAGAAAGGAAAGATGGAAGAGAAGAAGGAAGGTAGAAAA
AAGGTGGGTATGGAATACTTCAACATTNATGTAAAGAGTGGACCTAAAAC
TAACCTGAGGTTACCCTGAGCTATTAGCATATGCTATAGAAACTTAAATG
AAAAAATAAAAAAACCCAGCAAGGGAAACTCAAAGATTCNTNGTTTTTTC
ACTTTACTGCATATACACGTCCATCTTAAACAATCTATGTGCTTATATCC
AATAAGAGAGCATTGTTTCGCAAGGCTATTTGGGTTCTATCAGCATGTAA
AGGTCGGACAACTCAACTTTAGCAGAGTCAGCCTTCAGGTGAATAATTGC
TTCTCTCAGGTTGTGAGCATTTGAATTTTCCAGAAATGTTTCCCAAAAAA
TGAAAACTAAGAGTCCTAGGACAGCGTCCTTTAGAAGTTTTATAGTATCA
AGGTTTTTGGAGGAAGAGTATCCTTGTCGATTATCAACACAATGATTCCA
AGCAGGTCAATTTATGCTGAGAATATTATATAACAGAACCCACTTCACCT
CCATTATACTGACAATGATCTTCCTTACTTCAACCTTGTGCTTCTTAGTA
AAGTTGAAAATACTGAGCCAAGAACAGACAGTGACAATGCCAGAGACTCA
GATGTACCTATAGGTGCCTTCAGACAACATCAGCCACCCAGG
>rnd-6_family-2603#Unknown ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
GTCTTTTTAAATCGGGGTAATGNTTAGAATATTGTTTGTCCTACGTGTAT
ACAATCTGGTTCATTTGTACATTACACACACACATATATATATACACACA
CACACATACACACACACACACACATATGTAATATATTCATGTGCAGATAC
TCTTCCCATGTAAATTATTGCAGAGTGCTCCATTGACCTCCCTTGCTA
>rnd-6_family-7353#DNA/hAT-Charlie ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
GCCCTTGCTCTGCTGCTTTTCTTANAGTAGAAAATATTTCTCTGTACCTG
TGTCTCTATCAAAAGGTGGGAAACGAAAGATAGACCGAGAGGGCCATGCG
TTTCAAGAAAAATGGGAGAGAGCATATTTCTTTGTGGAAGTGAAGAATNT
CTACGTGTTAAAATGCAAACACCCGGCCTCTTTATTGACGCACATTACAA
AACTTCNCAGCCACGGAAGGCA
>rnd-6_family-6560#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
TGCCAATTAAGATAGGGAAGCCCACAAGAGACTCTTACTTCCATCCCAAC
AATGAGAATAAGCTGCATAAATTACAANATTCTTGTTTTNAACANATCAG
CAAACTGAAGATGCAAAGAAACCTAAATGAACTAAATTNTAAAAATGACG
GGCCCNTCNTAGGAGAGAGGAGACCTATGCATGTTTTCATCTCTGTGGGG
TAGCGGGAAGAGAAAAATCTGCCACAGACAGGAAAAGGATAAACCAGCCA
AAATTTTAATTAACTTTTAACGGCCTTGTGGGCAGGCATGATGGATTAGA
ATTCCAAGGAGCCCCAGCCATAGAGCAAGTCTGCATCTACCCGCCGACTC
TTCCTCATGGGTATTTACCGAGTGCNCGGGGGTAGTATGCCGAAGGTTGG
NGGCAGGACAGGAGAGCTGAGAGAAATTCNTCTGAGGCACTCTGAAANTT
CAGTCTCCAACAGGGCGAGATGAAGGCAGGAGAGCTGAGAGAAACCCATC
TGAGGCGCTCCGGACATTCCAGTGCCAGAGACCTACCGAAGGCCGGGAAG
GACAGCAGAGAGAATAAAACCCCTTAGAGGTCACTGAACCTTCATCAGTG
GTGAGGTAGCAGACTCCGAAAGCTGGGGNCAGAGNAGCAGGGAGAAATTT
TTCGAAGCACAGAAAGTCAGGAGCGGGACTGGAGAACACAAAGAAACTCC
CTAGTGACCCAAAAAGCTGTAGCCAGGTTATAAAGCAGAGNGAGATTGCA
TAGTTAGGATGTAAAACATAAGAGATCTCTGNAATCTACAAGCGCTCAGA
TCCCAAGCNCTGCTAAAGGGAAAGTTCTGCCTCGCCCTCATCATCTGAAG
CCAGTGACGAACTAAATCTAACTAAAGCNGCAACAAAGCCCGGACCCAGC
TCAACTACAGACTAGATGGACTNATCCACCACNTCAGCAGCCTGACAAAG
GAAGGGGCATGCTCGTTTCTGGAGGTNAATANTATTTAC
>rnd-6_family-1772#LINE/L2 ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
GTAATTCCACAATGNAAATCTGACTATATCCAGAATCTACCCTTTCTTAT
CACTTCCACTGCTACCACCCTGGTNCAAGCCACCATCATTTCTCGCCTGG
ATTATTACAACAGCCTCCTAACTGGTCTCCCTGCTTCT
>rnd-6_family-9246#LTR/ERVL-MaLR ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
CAGCTGTGGTAGGCAGAATTCCAAAAATGAGCCCTCAAGATTCCATACCC
TAATCCCTGGAACCTGTGAATGTGATGAGCATCACTCCTGCGTGTTACGG
CGTAGCCGACCTTAAAATGATTATCTGAGTGGGCCTGACCTAATCACATG
AGCCCCTTTAAAAGCAGAGGTTTTCTCTGGCTGGTCGCAGAAGAGGAAGT
CAGAGAGATTCGAAGCGTGAGAAGGATTTGATATACCATTGCTGGCTCGG
AGATGGAGGAGGCCATGTGANAAGGAATGTGGGCGGCCTCNAGGAGCTGA
GAGAGGCCCCCCCCACAGCTGACAGCCAGCAAGGAAACGGGGACCTCAGC
CCTACGACNGCAGGGGGCTGGATTCTGAAGTTGGCCAACCACCAAGNGAG
CCNGGGAGCACACTCTTCTCCAGAGCCTCCAGATAGGAACAGAGCCCNGN
CAGCACCTTGATTTCAGTCGTGCTGTACTGCATTGCCTACCCACAGAANT
GCGAGCTAATAAGTGGGTGCTGTTTTAAGCCACTACGTTTGTGGTGATTT
GTTACGCAGCAANAGTAACCAG
>rnd-6_family-8819#LTR/ERV1 ( Recon Family Size = 23, Final Multiple Alignment Size = 19 )
CTAGTGAGAANANTCTCTCTGGTCTCTGCCATCCAGGAGGTNCACNTACC
AGNGTGCACCTGGCGGCCAGTTGAATAGACTGGGGTTCTGGGNAGTCTCT
TTGTACCGGCTGTGCCAGCTCTCAGAGGAGTTTTGTCATTAGGGGTCCAG
TCCATAAGGGGCCTTTGCCATCTCAACCTTCATGGCTTTCAATGAAGGAC
TTTACTTCTTAGANTATCTTTGGGAGTGAGCCTTCGGAATCTNATGGGGG
CTGCATCATCCNTGCNCTCNCTTACGGGACGCCTCTCGCGTCCNTGGTTA
TGCCATGGTCTGGAAAGTTACCTCAGGGTCTTTCCGTAAAGGCTTATTGG
TTCGAGTCGCTATTAAGATCCTACTCATCAATGGCCAGATGATGGACCCT
TTGAATTGGAAAAACTTNTAAATTGGTCAATTTTTAGAAAGCTCTCGTCG
TAAACACTGTTTTACTGGTACCTACGGAAAGACCAAATTAAAAGGTGGAT
ACAAAGAAATATAACGGCTAGCCTTAAGAACTCCCTTAGTTTCAAAAGAA
TAGAAACNAAAAACCTGTTCAGGAAGCCTTATTAAATTTGTGGTCTCNGC
TTCCCCTCAATGGGTCTTACGGGTGCTAATAAAAACATNAGGTTAATTAA
CAAGAGAATGGGAAGAGGTGAGGAGAGTCAAGAGACTCTTCCCAACAAGG
TGGAAATTTTTAAAGGGTTGTTAAAAAATAAGGTAAATAAAGCAAATATT
GAAAGTGGTAGAATAAAGAGGAATCGGAAAGGGAAGAGTCACGGAACTNA
NCNCAGCAGGATGGAAATCTTTAGATGGTTATTAAGAAATGGGATAANTA
AAACGGACATTNATGGGGTCAAAACAACAGGTTTTTAATACAGCANTACC
TANGACGGNGTGAGCCAGAGGGACCCCCCATTNGTNCCCCCGGAGTTANA
AGGCCACCAGACAAGTCTGCTCTGNTTACCCCAGTTTGGANAAAAATTTT
TAAAAGCTGGTCAAAGGAAAAAATTACACTGAGAAACCTGACCAGCAATT
GCTCGGGGCAACANTTAGGCNAATTAATCAAGTTAAAGGTTGACGAAGGG
GCCTGGGTCCCTTGGCTCGACCCCTCACCGGGGAACCCAAAGCCTTTTAC
GCAGGAATGAATAAATGGCCGGGAGATAAAAAGAAAAAGTTTCTGGGACT
CCTTGTAAGACTGAGACTTGTTGGTCTTAATGGACGCTATGGTTAAAAGT
ATAAGAGTTAATAGAATTGAGATGAAAGTTTATAAGAAAATTGGTGTATT
TGAATGGGCTTTATGTAAGATGGTTGCATCTCTTTTGCCTGATTGTANTG
TGGGGATGGACATTGCGTCTCACTGGGGAATGCTTCCCCTGCCTGGTATT
GTAAGACAGGGCATGTAAATCCACCCTTCAGTGCGATGTTNATNAAACAC
GCTAAAGGAAAACGATCGACCGATGTGTTTGCCGTCTGCCTGAGCGCACG
CGATACGAAATAGAAACCGGGGGAGGGGGTGTGTGCTGATGTTCGGGGTC
TAATGGGAGAAACCTTGGAGGGTTTTTGCCCTTAGGGTGCCTTGGTCTGG
GGTTGACTTGTGTGCGCTGAGAACGAGGGCCGTTATTGAAGACCCTGTGC
AGATTTTGGACACCATGC
>rnd-6_family-594#LTR/ERV ( Recon Family Size = 20, Final Multiple Alignment Size = 19 )
CAGTGCCACCTCAGCGGNAACGGTTTGTGCCCCGACAGGATTTATCTTTG
TCTGTGGTGGTTATCATTCCCCTTGGGCCTAGGGATGCCTAGATGGCTGG
CGCATAACCGGGNAACGCCTCTTAGGTTATCTAACCGTGCCCCTAAACAG
TCCACAATCAAACTGAGACACCTCCATGGCCGNCACCTCTCNAGTCCTGA
GCCACGGGTTCGAAGGGANCTACCAGGAGGCATTTTTCATGATTCAGAAT
TCGCTTCCTTTGGCAGGTCCCTACTTCCCTGGCTAGGAGTAAATGCAAAC
GAGGNTATGATCAGGAACCTCTCCTTAACTCTTGAAAACATTGCAGAATC
TGCTGCTAAGGCAATAGCTGCCCAACAAAAATCCTTAGACTCTCTGGCCA
AAGTTGGTTCTTGATAATAGGATAGCCCTTGATTATCTTTTAGCTGAGCA
AGGAGGTGTCTGCGCCGTGGCCAACACCACCTGCTGCACCTGGATTAACA
CTTCTGGGGAAGTTGAAACTCAGTTACATAAGATCACCGAACAAGCCACT
GGCTTAAAAGGGTGACTCCTTCANCGGGGTCTTTCTTTGACTTATTTGAT
TCCGATTGGTTTGGGTCTTGGGGACCNTGGCTCCGAAGTGCACTCCAGAC
ATTGGGAATTATCCTGCTNATNATAATCATAATAGTCTCCCTGGTGCGCT
GTATTCTCTCAAAAGCTTTAAATGCATGTTCGCAGCCGCTAACCACCAAG
CAAATGATCTCCCTAAGACTGGAACGNCAGAAAAGGAACGAAGAGAATGA
CCAACTAAAAAATTGTGAACCTGACGTCATGACCTGTGAATNTCACACAG
AGGATCAACAAAAGCTGTGAGAACTACAGAGCGGTAGCTGAGAGTGGCGC
TAATGCCTTAAATTTTTGATCACATCTCTCAGTTAAGCTGATCAAAAGGG
GGGAATTG
>rnd-6_family-4906#DNA/hAT-Charlie ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
CATGAGACCCANAAGTCCCATGCAACTCACCTGTCTAATTTCAGGATGAA
GAGATTAGAAAGCTNCCTTCGTGTGCTACTTCTCAAATATGTCCAGATAT
TAACAATGTCTGTAAAGCAGTGCCAATTTTCTCATTGNCATTCTTCTATT
CAATAAAGTAGGTAATCTAAGTAAGACAGTACATTTTTCCCGTGGGACTC
AATAAAGCTATTTTCATTTTGAATGGAAAAAAAATACGGCCCGTAANCAT
TTTTATTTTTTTCTGAGTAATCCCTTCATTTCTCA
>rnd-6_family-1858#LINE/CR1 ( Recon Family Size = 27, Final Multiple Alignment Size = 19 )
GAATCTGGAAANCACGTCATATGAGGAACGGTTGAAGGAANTGGGGATGT
TTAGCCTGGGAAAGAATCTNAGGGGACATGAGAATTGTCTTCAAATATTT
GAAGGGCTGTTCTGTAGAAGAGGGAATAGACTTATTCTGTGTGNTTCCAG
GGGTAGAACTAGGACCAACGGGNAGGTTACAGGGAGGCAGATTCGGGTCA
GGTGAGCGCGGGACTTTGCTAACA
>rnd-6_family-1798#DNA/TcMar-Tigger ( Recon Family Size = 19, Final Multiple Alignment Size = 19 )
AGGCAAACAGNCCCGCACATCTAGATAGCNCTTGATGACATCACTGTATC
ACACAAGGTACAACAACTGATGCTCATAATGATGACCTGAGTCATCAAGA
AAAGGTTAAATTATGTCCAGTATNCTCTGTTTAAGAAGGCAGGGAAGTGT
GTAATACATTTTAGAAAGATTTCCATCAAAAAAATATTAAAACTTATAAA
TTGAGCACTTAAGGGGTTAAGNTTCAGTTATCTGAANATTTACGTATACA
AAATANCTCATTTCACTTAACGATGCTTAAGTNANTGAGGCATTACT
>rnd-6_family-1228#DNA/hAT-Charlie ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
AAGCTTTACAAACGTTTAATGTACGGATTAACANTGGTNCGCCCATCCAT
CAGATGTCAGTCAGTACCCAAGGCACTTGGCCCAGGGAAGAGCGGANGNC
AGTGGTACCCGANCTTGATCACTTGCTTTCAGCGTATTGCGACATACTGA
GTATATGTATTAAGTGGATTTACGGATTATANTATCTAGTTTTAACTAAA
CCAANCCTCACAAAATGGACAAGTGCTTTAAGAAGATTCCTGCAAAGAAA
CCGCGGATTGAAGATAATACTCTTGCAATGCAAAGGAACAGAAAAATGGG
GCTGANATGGCCTCTTCGCAAGTGGCTTNCGTCGGCCACATTAGGAAACA
ACGATAATCTAATCAGACCTGACTGAAAATCGGCCAGAAGGTTCATAATN
ATCACAACTATTTGAAATATCTATTTATATCCATTTTTACTAACGATGAT
TGTCCTATGTGTGTATGTATGTTTTGANATACTAGNTAAGCATAGCGGTA
CATGTATATANTTTATAAATAAATAAATACATATATATTGGGTGTGTGCT
CAAAAATTTTTTACTGATGGGGTACATGATCAAAAGAGTTTGGAGACCAC
TGGACTAGAACAATGAGCAAAGGCCACGAA
>rnd-6_family-5538#LINE/L1 ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
CCAGGAAAACTAGACACCATGACCCCAAAGGACGACACCGGNCNCCNTCT
ACACCGCACACAAAACTGACTAAAAGCCACAGTTTTCCACATCAAGCCCT
TCCTCTCCTGGGTCCCCTGAAGACGGACCCCACCCACCCAGCAGTCAGCC
GCACAGGAAGCTTCTCCCCACTTTTCCTCACCTTTTCCTCCCGTGGCGTC
GCCTCCCAGCGGGTCCTGAGGAAACCCAGCTCCCGTCAGCGTGGACGCAG
CCCCGCGTGTCCCGAAGCCGAAGCCCCGGCGGTCCTGAGGAGACNGAGCT
CCCGTCAGCTTGTCNCAGAGCCAAGTCCGCGGGCAGGGCGCACGTGCCCC
GNGGGTCAGAGAGGCGGGCTCGNCGCCCCCTGCGGGCCGTGGGAAAAGTG
CAGGCCGCGCCGCACTCACAAGTCCGGAGGCCTCGCCTGGGAGGCAGTCC
TGCTGAATCCACTAAACTGTGGAAATTCAAACTGAAATGGAGCCAAGTAT
CCCAGNATCTTCTCGAAACNTAGTTAAGGAGCAATTAATTAGAAACCATG
TGCAATGAAACGAATGTAGACACAAACTTTACAACTTANACCGAAATTCA
CTCNAAATTGTCCGCAGGCAAATTGAAATATACGAAACTATAAAAAATTA
TAGAGGATAAAAAGATATCAACACGGCNATGGGTCTCGT
>rnd-6_family-1804#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 19 )
CCAGAAAAATTCTGAAAAAGAANAGTATAAAAGAGAGGACTAGCTCTACC
AGGTTAAANCATATTNTAAGNTGCAGTAATTAAANCANTGTGGCGCTGGT
CATGATAGAATGTGTGAATAGGCGGANCAATGGAANAGANTAAGAAGTCC
AAAATACATGGGAATTTAGTATATGATAAAGGTGGCATTTCAAATCAGTG
GGGAAAAGATGGATTATTCAATAAATGATGTTGGGACAACTGGGTAGCCA
TTTGGGAAAAAATAAAGTTGAATCCATACCATATACTTTACANCGGANTN
AAAGATTTAAATGNAAAAAAATGAAACCATGAAAGTATGCTAGAAGANCT
ATCTTTATCATC
>rnd-6_family-1934#LTR/ERVL-MaLR ( Recon Family Size = 22, Final Multiple Alignment Size = 19 )
TACCTGAAACCCCATTCAAATGATACCATCAGAATATGAAATATATAACA
GACATCATTCATTAACTACCTAGTACCCATTCCCCTNCCCCTCTTCCTNG
CCAANAGAAACANNAACTNTGTTNAGATGGCAATNAATGNGTCAAACGGT
AAATCCTTGNTATCTCAGTCTTCCTNGNAGCAGAGCACTACGTGACTCTA
TAGGGGCCAATGAGACGTAAGGAGATATCTGTTTTGGGATTTCAGGAAAG
TGTTCGTCTGATCAGATCCTTCCCCTTTCTCTCCTTCTTCCTGACTTAAT
AGTGGATATGATGTGCAGCTGCACCTCGCTATTTTGGCCATGAGGGAAAG
GCCAAGAGAATCGCAGAGACATTGGCACTGACATCACTGAGCCACTGAAC
CAACGCCAGCAGCCGCCTACCTCCAGACTTCTTGTTATGAGAAAAATAAA
CCCCTATTTGTTATAGCCACTTTCAGTATGGTTTTCTGCTAACCTGCAGC
TGAAAACATTCCTACTGGATACAGAACTATAATATGAACAAGAGATTTCA
ACAAATTAGAAGGAAAGCAGATGGAGGAGTAACTACACAGAAAAA
>rnd-6_family-3478#DNA/MULE-MuDR ( Recon Family Size = 21, Final Multiple Alignment Size = 19 )
AATTATAATANTGGCTCTTCCTCTTCCCCTTTTCCCTCTCCTTCCCTTCC
TCTTCTCTTCTTCCTTTTCCCTTCCTGAACAATTCAGTCCTAAAGCCATT
AGGTGGGGCAGAGGNAGGTATCCGCGTCGGGGAGGTGATGGAGCATNGTG
GCCCAGAGCAGGGTGCCCAAAGGGTGAGGAAGGTATCTGCAGAGGAGGGG
TGTCNTGCGAGGGTATCGGAGCCCGACTGCGGTGAGGAGGGCGTCCACAC
GANAGGGGCGACCCGGCGGGGGTGTCGGAGCCTGAGCGGGGTGAGNAGGG
CATCCACACGGGTGGACGGCCTAACGTGGGGAGTCAGAGCCANAGCAGGA
TGAGGAGGGCATCCANCGAAGGTACTGGGTATCAGAGCCCAGCAGGTGAG
GGGGACATCCGTGTGGAGGGCAGCCTGGCGTGGCTTGGAGNCCAAGCCGG
AGAAGAGNGAGGAGGGCATNCANGCAGGGGAGCGACGGGGGTGAAGAAGA
GAAATGAGTTGTGCGTA
>rnd-6_family-1740#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
AAGGAAAGAAATTTTTAAATAGTAATTACCCTAGACTTATGATAATAGAN
AAATATACTCCAAAACTCCTAGGAGAAAACTTGCATTCTTTCTCTGTCCC
TTGAAGTTATAAATCTTATCATGTCTTTGAAATGTAAACACAGCCCACAA
TCGCCTGAGACCGAAGGAAAAAAAAAAAGGAGGAAAGAGGCCTTTTTAAA
ATACAAACCGCTGGAAANGCTCCCTCGCCCAAAATCTAGTCCACAGCCTC
CTTAAGATTGCTTG
>rnd-6_family-506#Unknown ( Recon Family Size = 24, Final Multiple Alignment Size = 18 )
CCACAAAGCCCGCAGCTGCTAACGCCGGACCCGCCCCAGCCGTGGGAGCA
CCAGTAATCCGCTCGGATGTCCCGCAGGCGCTGAGTTTACAAAGCCGNTG
GCGGCAGCGTAAATCCGTGGATCGCACAGCGCTGGGANACGGCTCAGATT
TCAGCCCTGCTTCCNAAGTCGCGCGGCCCCTGGGAATCGGCTCAGATTTC
AGCCCCGCCTCCGCATGTGGGCGACCCGCCGGCGCTTGCGCGCTCCCAGA
GCCCGTNGAGGCGGAGCTGCGCCCGCTGTGAGCACGCCGANAATGAGGCT
GCTG
>rnd-6_family-3688#DNA/hAT-Charlie ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
ATGAGATGATTTTAGGTGGTACGCGGGTGAACATTTANAATTTTAATAGT
TACGTATTTATTTTAATGTGTGTTAGAAAAANATAANTAGCACATCANAC
TTGATTTTACAGATATTATTGCTTAGGATGAGGCTAAANTTATTTAAATT
TAAAAGTGAGTCGATTTAAAGAAAAATATTAAATAATAGTACTGGGTGCA
GATAGGCAAAAATCGTGAAGGTGGTATGCGAATGACTGAAGTTTGGGAAA
CAG
>rnd-6_family-2450#LINE/L1 ( Recon Family Size = 22, Final Multiple Alignment Size = 18 )
AAATGAACNTAATAAGAATANCAATTCAATAAAGNAGGACCTCAAAAAAA
AGATGANGTTNTAAACTAGCATGATGAGATGAGAAGGGAGACTGCAGAGC
AAAAGAANACAAGCTGAGACGCACAANACCAATACTGTTANAAATTCAGT
AAGTGAACTACCAGTGTCCTGGGGGCTCNGTCTTGCCCTGGGCAGCAAGA
AACAAAAAGGATTAGACCGAAAATCGAATTACTGGCATGAAGAAAAGATT
GAGAAAATANCAGTGAATGCAANGGAAAAAGACAGAGATTAAAGCAATTA
AAGAAGAATAACACCGGNATGAAAGGCGAAGGCAATCCAACATAAGGATA
ATTGGTGTCCNTGAAGCAGGGACTCCAGAGAAANAGAAGTGTATTCAGAG
ATANAATNNATGAAAGTTTCCCTGAAATGAAGGAAGAACTGAATCTGCAG
ATNAAAAGGACANACCATATNCCNGGAAGATTTGTCCAAACAATTAATAT
CGAGGCATATTCTGGTTAAGTTTTTGACNCTTAAGACTAGAGAAAGAATG
ATTCTCGCAGTCACCTACAAAGAGGGAGAAAGAAGCTGGCCTCAGACTTN
TCCACAGCAGCATTCAATGCCAGAAGACAGTGGAGCAATGTCTACAAAGT
TCCGAAGNAAAGAAAGTGCGACCCAAGAATATTACACCCAGCCAANTTAT
CGTTCAAGCGTAAAGGCAACAGACATTCTCAAACATGNAAAAACTCAGGG
AACANAGCATCCGTGAGCCCTTCTTGAAAAACACTTGACAATGAAACCTA
ACCAACCGAGAGATGAATCAAAATAAAGAANTCAGGAATGAGAAGCTGTG
GTNAAAGGACTGGCAGTGGGCATGATCCATTTCAATGTCGAANTAAAACT
AAAAAACTAAGGGATTATGGTTACAGAACAGATATAAACGTTATAAATCN
TGAGAATGTAAAAATAATGTAAGCAACAAAAGTCAGGAAGGGGGTG
>rnd-6_family-6984#LINE/L1 ( Recon Family Size = 27, Final Multiple Alignment Size = 18 )
GAAAATGGAATCATATAAAATGCTCAATTAAACCAGAGAAGGCAGAAAAA
GAGTGGAAGACAAAAAAGGAACAAAGAACAAGGGCAACAAATAGAAAACA
GTNACAAACATGGTAGATATTAATCCAACCATATCA
>rnd-6_family-1150#LTR/Gypsy ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
GTGACAAGGCCTCGGAGGGAAAGGCTGCCAGGTACACTCAGGGAGGGTCT
GCTAGACGCAGAGTGCACACCTCTTGCCTGCAATTCCCACACCCCGAGGG
GCACCCCAGATCAGCTGAGTCCCCACACCTNCAGGGGNCACAAGNNCNGG
GATAGGGGACGGTNCTGCGACCACTGGCGATGACCAGAGGGGTCACCCCG
ACGCCTTGGCGCTNCCTGAGAGCCCCAGGNACCTTGCACAACCCTGGATG
GGGGAGGGAAGCCCAATGATATGNCTGAGATTGAATTTCCTACCAGCCCG
GCGGGATAGGGACTTAGAGTCAGATTTAANTTGATTTAAAGAAAATAAAG
AAGT
>rnd-6_family-7562#DNA/TcMar-Tigger ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
CTGTTCTGCTACAACACGCGTTTCTTTAACGNGAATTANCTCATATACGA
TTGGTAAACAGGGGAATGATGTCAGTATAATGCGGAAGTCATGTCGGTTC
ATACGCAATTTTCCCCAGCATGTTAATGTTTTGAAGCGATCAAGGGCAAG
CTTTCTCACAATTAAAGAGAANGCCTTAGCAATACATGAAGACCTTAAGG
AAAAAAGCTGAAANTCTGCAGAAGTGCTTCCTTTAGTGCAAGCAGTGGNT
GGTTTAGTGGCTTCAAGAACCCGTCGCTTTCCACAACGTTAAGCTATCTG
GNGAAGCTGCGAGTGCAGATGAAGAAGCTGCGAAGACATTTTCCCGCGTT
AAAACAACGGATTGACGAAGAAGGCTACACCCTGGATCAGATTTTTAATT
TTGACGAAACTGGTCTCCATTAGAAGCGAATGCCTTCAGGACCTACATCT
CGAAGGAAGCACGAGCCCCAGGGTTTAAGGCTGCAAAGAAGAAGTGCTGA
TTGCTAGGTGCAAATGCCCAGTGGAGATTTAACTGTGCTA
>rnd-6_family-1261#LINE/CR1 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
GAGGAAGGCGGCCNCGAGCCAGGAATCAAGGAAGGACTTCCGATCATNCN
GAGAATGGAATGGGCNATCTGAAGTGGTAGTGAGTTCCCCGTCACTGGAG
GTATTCAAGCAGAAGCTGAATGGCCACTTGGCAGGGATGTTACAGGAGAT
TCAAGCATCAGATGGGGGTTGGACTAGATGACTTCTAAGGTCCCTTCCAG
CCCTGAAAATCTCAGATACTATTCCTGCCTCTGNATTAGNATAGANTCAA
GA
>rnd-6_family-8833#DNA/hAT-Charlie ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
GTTCATTAAAGCATAAAAGTGGATGAAAATAGTAACACAAATACTACAAC
TNAGAATAANGTCATAAANNTAAATAGTAAAGATTCTGGTNCCAATGAAG
ATGTGAATCTGTAGGAACTCAGACATGTATGATGATTTCGCACAAGCAGC
CGAAAAAGAAAAGTGTAANTAGTACGATGNTGAATTATCTGAAAATTGGA
TTTTATTGGACCAGCGATCCATTCGCTCCTAGTCCCCAGTGCGTTGTCTG
TTATGAAACTTTGTCAAATAGTGGCATGAAGCCATCGAAGCTTTCACGTC
ATTTTCAAACAAAGCGCAGTGACTTCTTTGTAAAACCANTCGAGTGTTTT
TTTCCAGAGCAAGCGCAAAATAATGCTTTCCGGTATAAAATTGATGAATT
TTNTTCCGCTAAAGGCAGGAAGANGACCAAAACTACAGAGGCATCATTCA
AAGTTGCACTCCTCNTAGCNAAAAACAGGTACAANTCACACTACTGCTGA
GAAGCTTATAAAACCAGCTNCAAAATTAACGATANATATTATGCTCGGAG
AGAAAGCAGAACGAGCTNCTGGCAAAATTCCTTTATCAAATGGCANTGTT
AGNCGTTATATANTATCAATGGCATGCATNATGGGAA
>rnd-6_family-8543#DNA/TcMar-Tc2 ( Recon Family Size = 19, Final Multiple Alignment Size = 18 )
GGCAGTCGTGACGTAGTTGTCATTGCCTGNGCATGCGCGAACTTGGTCAT
AGCTGTTCATATTGTCGTCACTTCAGTTGAGTTATGTGCACTGTTGGCAC
TACATGTGTTGAGTTTAATGNCCATTTAAAATGTCTTCGAAAAGATTATA
CTATGATTCGGCATTGAAATAAAAAGTTATGTACACGCGAAGACGCGGAA
ACAGAGCGGCAGGCAAAAGCAGCTAAGTGATGTTGAAGCAATGACCATTC
TTCTATTTTTCTTGCAAAGCAACAACCAAATGCTTTATGGGANCTAAGAA
AGGAAGATATCCANAAGTAGATGAAGCTGTGTTATGTACTTGAGATNCGT
GAAAAGATTGCCTGTCACGCGCCAAGCAGAGCAACCGAAGGCAGGAGAAA
TTGCCAAATCCCTCGGAATAGATGAAAAATTTCAAAACAATGGGAGGCTG
GTGTGACTGATTCATACGTCGANGAGACTGTTGTTAAAGCATTGAACATG
AGTTCGTCAGAANCTTTCGGCTTTGAACAGAAGCCGCTTAACTTCCCGAC
ATGTGATTCAATTGAGGAAAANGATGAAACTATGANTTTAGTCAAATAGC
GAATGNTGATAAAATCNNGCGTNCTTTAACATGCCTCGAAATNATGCCGT
CGNTNCCAAAGGCGCTAAAGAAATTAANATCGTAAGCATGGGTTACCAAA
ACAGATATCACTGTGATGNTATGCGTAGCTACCGACGGCCAAAAGNTGCC
ANCANACTTA
>rnd-6_family-2692#DNA/hAT-Tip100 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AGTGGCAGCTCCAGAATTTCTNCGNAGGAGGGGCTTAGGGGCGGCAATCT
GGTTGGAAGGNGGCTNGGGGACTTGTTTGAAGCTGCAAGTCCACGTNTTT
AGCTTAGATTGCGTGTTTATTTGGGGTGGCTTGAGGGCTGACGGANATTA
CGGGANGGCTAAAGNCCCTCCGAACACCTTGGCGCCCCCACCAGAACCGG
NCCCAAGC
>rnd-6_family-1794#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AACAGAAATGCTGGATNAAGTATAACAATGAAAAAAATATATATCTAAAT
ACCTAAATACATATATATATATATATATGTCTTTGAGGTTTAAATAAAGA
GAGGAAATCCTCTGGCGCCGGAAATANAGAAGGAACTCGNAGCCGGNATN
TTAAGTGCACGAGCTAATGCCCCGACGGCCNAGGATATGCGTTCCTAACG
GACAGGGGCTGNAGTTTTGATGCCGGTGTCAAGACAGAAGACGCGNCCTT
GGACCTGTGNAAGGCGGGAGTCGGAACTGAAACTCCTGCNTAAAGCTGGG
ACCCTGGAAGGGCCGCNCCTTCCATGAAANGGACAGTAGGCTGAGAGAAG
CGGCAAGAAANCTTGNTTCTTTCAGGTTCGAGCGGGGGAAAAACANATCT
CCTATGAGAAATTGAAACCCAACTATGCCNCGTACAGGTGTAGAATCTCG
AATTTTATATTACTTGCATGGAATCCCAAAAAGAGAAATTAATATAAAAA
CTGGGCATNTCGGACCCGAAANTCCCGAGATCCCCGGAAAAATCAAATGT
AAGAGTTCTCATCTGAATGCTTGTCACGANTCTTGCAGTACGCANAGGGA
TGCCCCACAGAGTAATNTTAACTAGCCGAAGATAAGCTCACAATTAAAAA
ATTGCAANCCACAGAAGGGCAAGTCAGGAGACATAACTNGGAGAATTAGA
CCCCAAGAACCTGAAATANCAGAGCAATCTGCAAAGAGACAATAAAATGA
TTAAAGAGATGAAAAAAGGANTAGAAACATTGAAAAAGAACAGGACACTA
TNAAAAAAGAATAAGCAGATTTGAAAAAGAACCAAATAGAACTTCTAAAA
ATGAAAAATATAGAAATTNAAAATTCAGTGGACGGGTTAAANAGCAGATT
AGACACAGCTGAAGAGAGAATTAGTGAACTGGAAGATAGANCTGAGGANA
TTACCCGGAATGCAGTACAGAAATCTAAA
>rnd-6_family-4512#LINE/CR1 ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
CACAGNAAGAGCTCAATAGAAATTACCTGGCTATTGCTTGCTGACAATTT
CATCTCTCAGAAGGCAGAGGAAGCAACGAGGGGAACTGCTACTCTGGACT
TAATTCTGACCAAAAGGAAGAACTGGTTGGCAANGTGGAAGTGACAGGAA
CCTTGGGAGAAAACGACTACGTCATCTTAGAGTTTGTAATAGTNAGAGAA
ATGGTAGGACAGAAACGGTTAGATGTGTTCCCCAGATTT
>rnd-6_family-6135#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
GCANAGAGACTAATGCTGAGCCCCTGATACGGCACGATTCCTTGAGGAGA
CCAACTGGCCGCTTGGTGGCGAGTCGACTACACTGGGCTCTTTCCATCCT
CGAAGGGCTAGGGTTTGTCTTCNCGGNAATAGATACCNATTCTGAGTGTG
GTTCGCTTTCCTGNCTGCCAGCTTCTTGGTAGCCCGGTACTTACAGAATG
CCTGGTGCGCAGGCATGGAAATCCNCACACAGCTCCGACCACTTCGCATG
AAGGAGGGCGGGTGTGGTCCCATAACCATCATAGAACGCTGGACGCCTTA
TAAGGCGCGGTTAAAGTGACACCTCAGAGGNAATCTTGGAAAGNATGATA
TGCCACCCTTCAGAATGCNGTATGTGCGCTGAATCAGAGATCTCTGTAGA
GTCTGTGTCCNTAGAGGAAAATACACCCCACGGGTCTGGGAACCAGGGGT
GGAAGTAGGANTAGTCCCATTCACCGTCGCTCCTAATGGCCTACTTTGGA
GAGTTGTGCTTCCCGTCCCCGCAACTCTGGGCTCTGCAGGGTTGGAGGTC
CTGGTCCCCAAAGGGGGCGCACTCTTGCCGGGGGNCACAGCAAGGGTCCC
GTTGAACTANAAGTTAGTGTCGCCCGGGAATTTCGGACTCCTTGTGTCCA
NGACCAGCAGGCAAGAAGAGGAGTCACCATCTTGGCAGGGGTAATTGACC
CTGATCANCAGGAGGTAGGGCTGCTNTTACACAGTGGGAG
>rnd-6_family-2534#SINE/MIR ( Recon Family Size = 27, Final Multiple Alignment Size = 18 )
GGTGGAGAAGGGAGCGCCGGNCTGGGAGTCAGGANACCTGGGTCCAGCCT
CCGATGCTNCTAACTCGCTGTGTGACTTCGGGCAAGTCACTTCCCCTCTC
TGGGCCTCGGTTCCGC
>rnd-6_family-15954#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 18 )
AAATGTCTGTGGGGCTCGCTACGAGTAGTATGGGCCCAGGTGAGTGCCCC
AGGCATTCCTAGCCGANAGCATCACTATCAATAGGCTGAG
>rnd-6_family-4136#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 18 )
TGTTGCAGCAAAAATAGAAATGAGGTTTTTCCTCTCCTGANAACAAGGAA
AATAAAGGGAACAGTGAACAGGCTAGAGAAGAAACATAAACTGGCCTGAA
AGAGTTAATCAATCCTAGTTTTACTTTAACTGTTACTAATCTGTAGCGTC
TGTAACTAGATTTGTCCTTCACAAAGCTAACCTNTCACTCCCTAACNCTA
TGTGAATTACATCCTGCACCTGGTTTTACCCCCTACACTCCCTGTAAATT
ACATCCTGCCCCTATCACTCCCTAACCCTGTGTGAATTACATCCTGCACC
TGGTATTTACACTCCCTACACTCCCTTGTAGCAAATCACCCCTTGTAGCN
NTTTGCATTTCAGAAAGGAGGTCGCGGGCCGATAACCCAGAGACGAACGG
ACCCAATTACCGGGCTGCCTGACGCCAGCNGTGACTGTTTTGAAATAATG
CAAGAAGAAGAATGCAAGACCTTCACTACTTTGATCCTTATCACCTACCC
CGGACTGCGAGCCCCACNTATAAGACCTCCTCTGATTCCCGGGG
>rnd-6_family-2836#DNA/TcMar-Tigger ( Recon Family Size = 21, Final Multiple Alignment Size = 18 )
TCTGGGACTGAGGACGTAGGAGTCAACAACTCGAATCATAAAATCAGAAA
GGCATTGAACATTTGGATGGAGAACCAGACACAGGGGGAAAAATCCTTTN
ACATGCATATTATCTGCAACAAAGCAAAACGAATTTACGAGCATCTCGTT
GAAACTGCAGGGGAGGGAGACCCTGAAAAGTTTCTANTGAGCAAGGGATG
GTAAATGGAAATTAATTGTACAGTACCCATTATTACTAATTTAAGATGTG
TAAAATGTCATTGATATTTTCTTATTTAGCGTGCTGTCTTATTTTTANAG
ATGATACAAAGNTTTATAAGGGCTGCCTTTAACTCCCCCATAACCTTATT
TTTTCCCTAAAGTCTTAAGTTCCTCAAACTGAAANNTCTC
>rnd-6_family-494#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TCCCTGTGTTAAGGAANCANCCACACNTAGANGCCTTNAAAGGACAATCT
ATTCAGCGAGGTTCCCATTGTTTGGCGACGGTCAACCTTCGCAGCGCCAA
TACNGCAGGGACTTAGGTTTGCTGCTAACNAGGCTAGGTGACCCTGCATA
CAGAAGCAGGCNTTTCCCTTTGGAAGCTTGGATCCCGGTTTCTCAGGGGC
CGCTTGCAAGACCCTGCTATTGCCCAGCATCTGTCCTCTGCCCCTACGCC
CGGGTAGGAAGCGAGTATTTTAGCCTGAGAAGCAGGGCTCTTGCAACTCT
GGAGGAGAGCTAATCCTGCAGCCCACGTTCGTCCTGGGAAACCGCAAGGC
GACCCTTGGCCTCAGCGTAGTGGCGAAATGGCCGCCGGACAGGTCTTGCC
TGCCGCGGTTTCCGTGAGTTCTCCACCGTCTTCGGGCTTAAATGGAGAGC
GAGGAGAGCTGTCGGCTCTCACAGAACTCTGGCCTCCGCACTGTTTGCCA
TGCAGCTGCGCTNAAGNCCACACGTCTCCTCCCGACCTGCTGAGAAACAG
GCATCCGTGCAGGCCCTCTGTTAACACTTCCTGGCGTGCAGANTCCAAGG
CGACACGCTGTCCTCTTCCTTGGAAACCTACGTTGCCACAGCTTGCCAAC
GCTCACGAAGGCAGTCCGAGCCCGTCTCATGTGCTGGGCCACTTGCATTC
AGTGAGGAAAAGCCACCTGCATTGAGGTGAACACTCTGCTCAGCGTTCTC
TCCGGGAGCTCACACTTGCCCCCTCTCTAGGTTAAGCAGGATGTCGAGGT
GAGGGCCAACCTGAGCAAAGAGCACAATTGCTCACNTTGCANTGNTAGTC
GTCGTAAGAGGAATTGCCATCCACG
>rnd-6_family-99#rRNA ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
ACTAAGGAGTANACAGGCTACAGCTGGTCCTAANGCACCTTGGGCTACCC
ATCCTGAACACNNCCATCCAGAAAGAACTAGGGCTTAGTCANTTTAGTGC
ACTCCNCGNAGTGAGGTTTTTGGGGAAAGGAAAGAAACACGTGNAAACAC
ACACACANACTCCCNCACTCACAGACATATGCAGGAAAAAAAAAAAAGAT
CCCAGGCACTCACCCACATCCTTNGGGCCAGTTGTTCCTCCCAGCAGCTG
TNAGGTGTCTCGAATTCGTCCCGGGANACATCACTCGCCTGCTCCTGGAG
CCTTTCCTCTGNAGAACAGCCCGAGCGCATTGCTCTCTCCTTTGATGCAN
CCGGCGCAACTGCCAGCGCCCNGCCGTAGGAGAGCTGGCCCCTTCACCCA
ANCCCCTCCATCAGGAAATCTCCTCTTTGAACACCATGGGGGACGCCAGG
GCCGGGGCCAGGCCTGGTGCGTGGGTGGGTGGAGTGTGGGGTTTCCCAGG
AAGGCAAACATGGAGCCCACAGGGTGCGCTATGTGGCTTCAGGTGTGTGG
NGGGTAGGTGCGGGTCCTGATGGAGGGGCAGGGAGAGGATGGGCTGGGAT
GCGCTGAGCGTCAGGGGCGGCTCAGAGAATGGCGGAATCAGGCCCGAGGN
GCTGCTGCCGCGACCACTCTTCCCAGAGGAAGCCCGATCTCGCGGNATCT
CGGGAGATCTACGGGGGCNGGCAGGGGAGTCCTGGGATGAGAAACACCTG
GGTGCCCCGGGTGCCGGAGGCCCCTCNTCCCAGACTCNTCCNTAAGGAGT
CTGGCTCACGCCACCTATCAAGCAAACCCCAATCCTCCTCGAGCCCTCCA
CCCCACTCAGAGTCACAGTGCAGCGGCGCCTCGNCCCAGGGGCCCGGCCA
GGTGTGGGGAAAGGGCTCTGGCCCAAAGGCTGTGCAGGGGCAGGACTGCC
GAGGCCAGAACGGGGGAGCGAACTGCGCATATGCAGCTGCAAATCTATAG
CCTTCCGGGAGCCTCAGGGGCCCAGGGGCAGCGACGCGGGCTTCCGGCNA
GGAACCCTGGGGCCCCAGTCCGACGTCTGCCAAGGTCCAAGGCCGCAGCA
ACCCCANTGTGCATATTCCATTTCAAAGTCAGAAAATAAGNNGTNTCAGA
CCAGCAGAGGACCTGAATGGGAGCCCGCCTGATAGTACCTGGTGCTGTCC
ACCCTTGGCCATCCTCCTCT
>rnd-6_family-94#LTR/ERV1 ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
TCCTTCTTCCTGACACTACTGGACGTCCATTCCATCTAGAAACCCTAAAC
TAAGGATTNTTAGGAATCCTCCGGAAGCCGCTGACTNCGGAAGCGGACAG
CTTCCGCCCAAGACGATGGAACAGTATTAATTTTCTGATTNTTCAACGCT
CTTTTCTGTNCCTTTGCTCTACTACTNATCTTGCCTATTAATACACTTTG
ACACCCTNTAGGACNCTAAGTATGNTCTCCCTTATCTTCATCCTATTATT
TTTGACCCCTATGGCCCTCTTCTGCCACTTAAGAGAAAGACAAAACTCTC
TCATACGTTTTCCCCAGANCATAGNTGCTGCTCTGAATCTAACTGTGGAC
CTGTATCCTCCACCTGACCCTGCTGACAAAAATTTAATAGCTGTTCCTTT
AAACTTCTCAGAAGACAGATTCCTTTTAACAGGCCCCTTCTGGTNCTTAA
GTTTCCCTCACATCATTAATCCCAACCTTCAGTCTTATAAAAATTGGACT
TTGACCTCACGTCAACAAAATGCTTCCGCTGAGGTCATTACAACCCTATC
AGCAAGACNTAGCCAGTAAGAAGCGCCAACATTGGAGCTATCCTCGCCGC
GATAGTCAGTTTGTTCTCTTCAGAGNCACTTCAGCCTGCTTTGCGAAACT
GTTTANTTCCACTCGAAAAATCTGCCCGCCTCGAGGGACACAAAATTGGC
TCACCCCTGTTGTGATAAACGATACTTATGCTCCCAATACAGTCTGCGCT
CCGCTAGGATACTATTTCTTACGTGGACATCAGGCNTACACCNATCTNCC
GCACACTAACTATCCTGTGTACTCAGGGTAATTGTTAGAGACTTTCAGAT
ATTTAAAATTACCANCCCTCCAGTGGATCATGTTTCATCNAAAAAATTAC
CCAGANACCTCCAAAATGAGGCAAACGCGGATTATTCTGGAAAACTCCCA
GGAGGGATAACTGATTCNCTCTTCATGCATACTATGTGAGCTGCGATTCC
CACAGTGGGAATAATACAACTGGNAAAGNTNGTCCAAAACTTGTCTTCGA
CCCTAGCAGAAGTCATTAAATAACACAANTTCTGCTCTGGAGGTCAAACA
AGTCTAAATCCATTAGCCGGAGTTGTTATGGACAATCACGCAGCCCTTGA
TTTCCTCTTGNCTAGCCAAGGGGAAGTTTGCGCTATAGCAAACACTTCTT
GCTGCGCCTGTGTCACTACGAGGGAATAANCAGCCTGTGACTAGGCTAAA
AGAAAAGATCACCTGGCTCTCTAAAACAGACCCAGCTGGACTGGGATGTT
TTCATTGCCTGGGNTTTATAATCTAGGCCCTTGTTTCANGGCCTATTAAA
AAGACTAATAATCATTTTGTTTCTGATAACTGCCTGTGTTACAGTTGGCT
GATGTATCCTGTNCAGAGTCTTAAATGCTACTNNGCAGCCATTGTCACAT
CAGATGANTCAACAACTCATCCATGACAGAAGAAGAGGAAAGACTAACTC
TAGTCCAACTACAGACGACATTCTCTAGACAACCTCCTGATCGGCAGAAT
CTTGGCAATGGTGAAGATCTGGGTANCACGGATTAATGTCCTGCAGCCTG
ACTTCANCTGCCCTTGGCCGNAAGG
>rnd-6_family-208#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
TATGGCTGTTAGCATAACTGACGCCATCTTGGGCCCNTACAGTTCCTCCT
GTCCTTCCGCTGACCCTACCCAGGACTGTACTGTGCGGTAAATCACTTCT
CTGTCGTCAAGGGCTTTGTAGTTAATAGATATTGTTTAATAATCATTAGG
ACCAGGTGGCCTCTATGCTCTGTTAGTCCCCAAACAATGATGAAGACCTT
CGCTGACGTATTCCCGGCGCCCACGAGACTAGTTACCCATTCATAAATCT
TGACTTAGGAATGCACGTCCTGTTTCCAAGCACCTACCCCCATACCCTAG
GTTAACTATAAAATTGTCCCAGTGGCCCCTCGGCGGTGCGGAGTGCAGCT
GCGAATGCTTCCGGATCGTTGTCCGCCGATCCCGATCCCACCCTGTGAGT
AAGTTACCCTATAATAAACTGATCCATTGATTATATGGAGCTGCCTGCCT
CGTTTTTCGGTCTCAAGATGCCTTCTCAGTTCGGTGGGCACTTTTCGTTC
CCTCCGTCCTCCAA
>rnd-6_family-5781#Simple_repeat ( Recon Family Size = 21, Final Multiple Alignment Size = 17 )
CAGTTACATATGTGTATATATATACACACATACATATATGTATATATACA
TATGTATGTATATACTGATACTTATATATACTTTCGTGAGAATCCTT
>rnd-6_family-659#LINE/L1 ( Recon Family Size = 20, Final Multiple Alignment Size = 17 )
TTATTTCCGAAAAAAGATCTGAAGCAAATATGGCAAAATGTTAACATCTG
TTAACGANTGTGCAAGATACACGGGTGTCTCTTTATTTTCTCGTATTTCT
GTGTTCTGTATGTTTGAAATATTTCATAATTAAAAACA
>rnd-6_family-493#DNA/hAT-Charlie ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
GCCCCAGTCGCATCCTATACCAATGAAAATGTCTGGGGGTAGAAGCCAGA
CATCAAAATTTCCCAGGTGGTTCCAATGTGCAGCNAAGTTTGAGAACCAC
TGCCAT
>rnd-6_family-5927#LINE/L2 ( Recon Family Size = 21, Final Multiple Alignment Size = 17 )
ATCTTTCATCAAGTCCTGTCGATTCTACCTCCTAAATATCTTTCGAATCC
ATCTNCTTCTCTCCATCTCCACCGCCNCCACCCGGTCTAAGCCACCATCA
TCTCNTNCCTGGGCAAACGCAACAGCCTCCTAACTGGTCTCCCATATCCA
CTCNNCCTCCCTCCAATTTGTTGTCCACGCGGTGATCTTTTAGAACNAGN
AGTTTACCTGNTCATGTCTGGTACCCCC
>rnd-6_family-114#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
GCTTCTCAACCTTGGCTGCACAGTGGAATCACCTGGGAGCTTTTAAAAAT
GCCTCAGCCACACCCCCAGACCAATTACCTCAGCATCCG
>rnd-6_family-5461#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
GTTTTGGAGGTTCACTGAGATGCCCAAGTGGACTCACTTGACAGAACCAG
GTAAACCGCGTTGCCGGAGAAGTGTACCCCAACGGGCTACTTAAGCCCGG
GCACTCTTTTCTTGGCTTACGGAGTGAATCCCAAGTGCGATAGAACTTTA
ACTTTNCTGACTCTGTTTCTCTAGTTTTTCATTTTTGTTTTTACTGATTT
TCTGTTTCTGGTTTTGGTGGCAGCAATGATTGGGAATTTGGTTTTATGGT
CTGACCATTTGGTGATCTCTGTAAATGGATTAATGGTATGAGGAGATCTA
TTCTCTGTTGGGTGAGAGACGACAGAGAATCTGGTTTGTTAGTCTTTTTT
GTTTTGTGTTTGTTTGTCTATTTTGAGCTCAAATCAATTAAGAATTTCGT
GCCCACTGGGAAGGAGAACGGCTCTTTGAGATCTGGACTGGTGAGTTTTT
GTTTCTGTGTTTACTTTTGACCCGTGGCTAAAGTTGTAGAACGGAAGCCC
TNTCCGTGTGTCTNTATGTCTGTAATTCAGAAAGGCCTTTACNTCTCATT
ACGTGAGTGTGAATATTTTCCCGTATCTGGGTATTAATAANTTAGAGTTA
TAAAGTCTCTAAATTAAAGGAGCTCCGTTCTGATTGGTTTATANAGACAT
ANAAGTATTTATATAAATNTAATGANCCCAAAATTCACAGAAAAAAAGAA
ACTGAACTTCTAATACTTTAAATGTGTTGGACTTAAAAAAAAATCCTCTT
ACAGAAACTGCTAACTCAGAAACATTTTAAGAATCCAAGTTCACATAATT
AAGGTGAATCTTT
>rnd-6_family-1514#LTR/ERVL-MaLR ( Recon Family Size = 24, Final Multiple Alignment Size = 17 )
TCACCAAAAATCTNCTTCCTTTCCTCCTGGGCACACAGCTAGACTACATT
TCCCAGCCTCCCTTGCAGTTAGGTTNGCCATGTGACTGATCCGTAGCCAA
TGGAACTGGGATGTCACTTCCAGGCCTGGCCCATAAAAACCTCCCGCATG
ATCCTCCATGCTCTCTCTTTCCGTCTGCCGGNTGGATGCAGAGCAGANCG
AGGNCNCNGNGGTGGCAGANCCATAGGATGGAAGGAA
>rnd-6_family-1624#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
AAAANACATTTTCAGACAAAAACTGAGTTTACCATCATAGACCTCGCTAA
AGGAANTTCTAAAGGATATACTTCAGGAAGGAAGAAAATGATCCCAGGAG
GAAATCTGAAATGCAAGAAGGAATGGTGAGCAAAGAAGTTGTAAACACGT
AGATAAATCAGTGTAAAATAATACTAACAACGTCTAATTTGNGGGGCAAA
ANAACAAGACAGGACTAAAATACTGGATNACAATATCTATAAGTTGGGAG
GAGGGCGATNAGAGTTAAAGCATTCTAAGGTCTCTGNATTGTTTGGNAGG
AGAGTANAGATAATGATTAACCTAATTTGACGTAGNTAAATATGCTANAA
TTTCAAGGGTAAACACTAAAGGATAAATTAAATCAGTAGAGAAAAATTGA
AATAAAAATCAAGGTAAGAGAGGAAGAAAATGAGAAGCATGGAAAAAGCA
GGACAAATAGAAAGCATAAAAAAATGGTAGAAATAAATNCAAATATATCA
GTAGTCACAGTGATGTAAATGGATCAGTTTCTGGAAAAAGACATATTGTC
AGATTTCATAGAAATAAAATATAGTTCTATGCTTTTTACAAGAGACACAA
CTAAANCAT
>rnd-6_family-630#DNA/TcMar-Tc1 ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
TTGGTAAAAATAAAAATCACACACACATACATGCACGCACGCACACGTGC
ACACGTGTGTGTGTGTGTGTGTGTGTATGTATACTGGGTATTAANTTCTA

>rnd-6_family-8230#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TGTATACAAGCCCCTGTGTCCCTGTCCTTTGAAGTAAAAGGCTTTTGCTT
TAGTCTCCCAGGCCTCCCCTGAGTCTCAAAAGGCTGGCTCAAGAGTTAAT
GATTAGGAAATGTGAAGATGTAGAAACAAAGAATAGCTGTTGGGCCGGGA
AACTGGTAACAATTTAGACTATAAACCNGCCACATAGCAGAGTCACCGAA
CTCCCAGTTCCCTGAAAGATACAGATAAAGGCCTGACACACATTC
>rnd-6_family-707#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
GGTTAAATAAATTATGTATCACCACAAGACTGAATATTATGCAGCCATTA
AAAATCATGTTTTCGAAGAATATTTAATGACAGGGAAAATGCTCACAATA
TAATGTTAAGTGGAAGAAAGATGTAAAACTGCTTACAATATGACC
>rnd-6_family-7521#LTR/ERVL ( Recon Family Size = 28, Final Multiple Alignment Size = 17 )
TAAGTCTGCCCTCNGGCCGNTNTTGACTGGGCGTACTCGGCGGGAACCNN
TAGAACTGCCCGAGCCCGCACAGGTTGTNAACTTGAGTATAGGATACCTN
GTGGACAAAAAGAGATTACCACTTTAATTAAAGCTGGAGCGCTGGTACCA
ACGNATTCTCTGTACGNTAGCCCTGTGTGGCCCGNGAAAAAGGCGGATGG
CTCGTAGGGGCTAACGGTAGACTATNAAGGCTTNAATAAAGTAGTGCCGC
CTACAGCATCAGCAGTCCCTGNTACGGTTTCAACCNCGAAAAANATACAG
CAGGCTAAAAAAGACCGGNACTCAGGGGCTGANCTTGCAAATGCTTTTTT
CTCAATCTGGAAAAGAGCCAACAGCAGTTTGCCTTCACGTGGGAAGGATC
CCAATTTACGTTTACTGTATCGCCACAGGTTTATTTGAATTCACCAGCTT
ACGGTCACGATTTGGTTAGAAGGGATTTGGACTTGACGCAGGTCTCGAGT
GTAATAATACGCTATACTGATGATATCATGATAATATCGGAAACCGAAGA
GCAGGCAAGGACTGATTTAAATGCAGTGGCGACACACGTGACCAACAGAG
GCTGGTTAATAAATCCAGCAAAGGTCCCAGGGCCCGCCCAACGGTNAAAT
TCTTAGGAATAACCTGGGCAGGAGCCACCCGCGACATTCCACAGGCGACT
AAAAATAAACTGCTGTCGCCGCCNACCCCTAGAACTAAAGCAAGGAGCAA
GCCAGCATTCGGGTGGTTTACCTGGATTTTGGAGAATACATCTTCCACAT
CTGGGAATACCGCTAGCTCCCATCTATAAGACTACCCGAAAGAAAGCTGT
ATCTGAGTGGGGACCTGAGCGAGAGCAGCCTGCGTCTGAACTGCAAAAGG
CGGCGGCTCTCTCAAGACTTACGGGGCTTTACGGCCCCCACTCAGATATG
ATTTTGGAAGTATCTGCNACCCGCACTCCGCAGACTGGAGCTTATGGCAA
AAGCCCGGGAGCGCCGCCCAGCGGTGACCGCTGGGATTTCGGACCAGAAA
ATTCCCAGATGCCACGTCTGGTACACGTCGTTTGAGAGACAATTAGTAGC
CTGGGCATTAACTGAAACTGCCCCNATGACCGAAGGACATAAAATAATCN
TGAAACCTGAAATACCCATAATGTCNTGGGTGATGTCGGAGAAACGCTCT
AATGAGGAAGGCGGTGCCCAGAAGNGCTCCATGATAAAACGGAAATGGTT
TATNCGGGAGCGTGCTGCCGGGGGAATGCAGGGAGGTACTCATTGNATTC
ACGAGCAGGTAGCCTCTTTTCCTCTAGGACCGACTTCGGAGCCGCCTGAG
GAGCTGCTGGATCCTACTGNCACGTGGGCGGTGCCCTATGAACGGCTCTC
NACTGACCAACAAAGAGCTGCTTGGCTTACGGACGGCGGTTCCAAGGTGG
ACGGACAGCATCCTGTTTGGAAGGCGNCCACACTAAGACCAGCGGTGGAG
ACTGACCGAAGGAGTCAAGAACAAATCAGCTCAGTGGGCTGGATTGCATG
CTGCTTTCCTNGCAGTGATGGAAGAATTGAGCGATGGTAAAAGCCCGAGT
TTGGGTTTTTACCGACTCATGGGCGGCGGCCAGTGGCCTGGCCGTATGGT
CAGGCAGANGGGCAATGGAAACTGGACTATTAAAGGGATGCCCGCATGGG
GCGCGGCCCTATGGAAATCACTATGGGAATTTAAGGGGCGCGTTAAAGTA
GGACACGTCGATGCCCATCAGAACTCTTCCCGGNTCGGAAGGTGATTGGA
ACNANCAAGCGGATATCTTGGTGCGCTCGCTTGAGGCGGCCACCTGGGTC
CATGAAATGAGTGGGCACGGGGGGGCTGCAGCAATGCAGAGATGGGCTGA
ATCTAGACATATTCCTCTCGCACCCTCAGAGGCACAAAATGCCAACAAGA
ACTGTTCTGTCCGCCAACAAGAGACAGAGACTGCAGATGGCTNTGNGGCA
GATTCCCCGGGGGNAAGGCCCCGNNCATAGCTGGCAAGTGGATTANACTG
GACCATGCCGGTAGCCCCGGGGGCTACGAATGGGTCCTGACAGGAANAGA
CACTTACTCTGGACTGGGCTTTGCATACCCGGTGGTAGATGCAAATGCTC
AAAATACTATAAAAGGACTGGAACAGAAGATACTGTAC
>rnd-6_family-805#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAAACCCCTAACAAGACTGATGAGAGAGAAAAACAAATTACCAATATCAG
GAATGAAAAAGGNGACATCACTACAGATCCTACAGACATTNAAAGGATAA
TAAGGGGATATTATGAACAATTTATGCCAATAAATTTGAAAACTTAGATA
AGATGGAAAAATTCCTCGAAAATA
>rnd-6_family-2902#LINE/L1 ( Recon Family Size = 19, Final Multiple Alignment Size = 17 )
CAAAAATAACTTGAAATTTTTTTTCAGACAAAGACCAAGNAAGTTTACCA
CCAACAGATCCTCACTAAAGGAACTTCTAAAAGATATACTTCAGAAAGAA
AGAAAATNATCCCAGAAGGAAGGTCTGAGATGCAAGAAGAAATGGTGAGC
AAAGAAATGGTAAACATGTGGGTAAATCCAAACAAACACTGACCGTATAA
AACAATAATAATGAATGTCTAATTTGTGGGACAGAAAAGGAGAGAAGGCT
AAACATGACTTA
>rnd-6_family-7352#DNA/hAT-Charlie ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
CATACTTTGTGAAATGGGGCACAACGCGAAAATTACTTNTACCACAGAGG
TTTGCTGGTTATTCNGTGNCAAAGTACTTAAAAAGTTGTNAANNTTAAAG
ACGAATTANATTTTTCTTTTACAAAAAGACNNGTGCTCCGAGTTCGCTGC
TTTTCTGTGATGACAAGTGGCTGTCAGAGTATGCTACCTAGCAGATATTT
TGAAAAAATAAACACACTTAATCTGTCTCTTCAAGGTAAAGATGATATTT
TAACAATAAGTAAAATAGCTGCTTTNAAAAGAAACTCGTGCTATGGAGAG
AGCATTTGAAAATGGATATTTGGAAATGTTTCCATCGTTATGTGATTTTA
TTTGTTGCTGAAAACGATATGTGTCACGTATAAAAACTCTCANATCTGCA
CACTTTAANAACTTGCAAACAAAGACCTTAACGATCTTCCAAATTGTCAA
AAAGAGTTTCAGTGGATTTGAACTCATTTATTAAGAATATAAAAATNCAA
CACCTTCCGATTAGTTTGCAAGAACAATTATCGACATNAGGGANAGATGG
AAATTTACTAGTTGAATTTCAGCAAAAACCTTCGCATAATTGATGGAAAT
GACTGAAAAATGAGTATCATGATTTAGGTACAAGCCAACATGATACGCTT
CTTCCATTTTTAGATGTGCTCTTTGTGAGGTATCTTTTCAGCTACGNCAG
CCGTTAAAACCAAGTATCGAAATAAACTGAGC
>rnd-6_family-301#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 17 )
GAGAACCTCCTCTCTTTCCTCTCTCCCTGTTTCTAGCCAGGTGTGGGNAT
ANGATCTAGGCTCGGCCAGTCAGATGCTCCCGCCCGGGACTTTGAAGTCT
AGGAAGTGACAAAGGCGCAGGGACGGCTGAGAAATTATCTCGGCGATGGC
AGCAGTGGGGCCATCGGGTACCGGTGGCGGCGTCCTAACCGCACGTTCCT
GTGGCGTGACCTTGGCTGTGTTTTCCTGCCGCCCGGCCTCCCTTGGTTCC
TGCCCATTTTCCAAGCCTGGTTCTCCAGCCTTCCCGTCGATTGT
>rnd-6_family-1960#LINE/CR1 ( Recon Family Size = 25, Final Multiple Alignment Size = 17 )
CAGGATAGAAGAGAACTGCCTGGCTTAANAGCAGCNCATGTGAAAAAGAC
CTTGATTTGATTGTAAACTCAATATGAGCCAACAGTGTGATGNGGCTGCC
AAAAGAGNTAATNCGATCTTAGGCTGCATTAATAGAAGTATAGTACCAGA
ACAAGAGAAANGATGGTCCTGCCCTTCTCTGCGCTGGTCAGANCGCGTCT
GGAGCACTGTGTTCAGTTCTGGACATCNCATTTAATAAGGATACATGACA
AAGTGTAAGGTGTTCNGAGGCGAGTAACTAGGNTGGTGCAAGGATTCGGN
AGCCACATNATGTGAGGAACACTTG
>rnd-6_family-13936#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TTATCTCTGGACCCTTTNACTTAAAGATTTATGTTAACTCCTGCTAAAGG
TGGGGGTTGGAGGGTTTTGAGCAAGGACACTCCTGCTAAAGGTGGGTGCA
CGGGTTTTGAGCAAGGACCTGGAGCAGCTCTGGCT
>rnd-6_family-2817#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAGGGGTCCAGAATANGCCACNGCGGCATAAAAAGTTATTTTGAGCNGAA
GGCATTTGAGTTCCTGAAATCCCTTATCTGCCTAAAAGCAGAGCCTCCCA
AAGAAT
>rnd-6_family-2341#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 17 )
TTTGTATATGAACATACTAAGGGCTACTTACTAACATAGTGACTGAGTTA
NCATTCTAACTAAAATTAACGTGTTGCTAGGGTTTACTGAGGACTCTAAT
TCAGTATTCTGCTAAGAAATCTGGCTGCTAGCTCTTGGCAACATTGCGAA
GCGCCTGCATGCAGATAGTTGGAATTCCCGCAATTTTGGGAAGGATACTT
TGTTATCAGGCATCATCAGTGTTGTCTTGAGTTGGTCGTNGTTTTCAATT
GCTGTATTCTTGCTTTTTAATTATAAATTAATGTTAATTAGCTTCATCGT
TACCGATTTAGTTTGCCGTGGGTCGTTTGGTTAACCCTACAGTGTGTAGT
GATGCATATTTGCATTTTGATTTGNAATTTTCCAATAACTAGACTTTAAG
ATATTTTGCATTGCGGTTCAAATATGAATCATCCATATCCCTANTGCTAA
AGCATGTGTACGTAATCACTCTCAANCCTGCTCGTACGGTGACGCTTGTC
TATGACTTTGNATATATGCTTAAACGCTTGCAACATACTATCAAGGTAAG
TAGTAAAATTACTGGGTTATTTTTAAGTTTATAGGGCATTGTTTTATAAT
ATAAGCGTATAATAAGCTCATACTTATCTTATAAAAATAATAAGCGATTC
GTANATGCGTTCCCGAGTATTTATTACCTAGGTATTTATTATCTAAATAT
TTTCCCGCGNGAAAGCGGGAACAGGTGGGA
>rnd-6_family-1758#LINE/CR1 ( Recon Family Size = 23, Final Multiple Alignment Size = 17 )
GGGAGACTTGATAGCTATCTTCAAATATTTGAAGGNCTGTCATGNGGAAG
AGGGATTAGGCTTGTTCTGTGCGGCCCCAAGGGACAGAACTAGGACCAAT
GGGTGGAAGTTACAGGGAGGCAGATTTCAGCATGTAAGAGAACTTTCTAA
CAGAGCTGCCCAAGACGGAATGGGCNGCCTCAGAAGGNAGCGTGTCCCAG
ACGCTGGCAGCGTTGAGCGAAGTGAGNGACGACTTANTGGAGTTGCTGTA
GGGAGAATCTANTCTCTGGCCGGTTATCCTGGACGANCTTTTAAGAGTCC
TTTGGCAGCCCTGAGATT
>rnd-6_family-1198#LTR/ERVL ( Recon Family Size = 25, Final Multiple Alignment Size = 17 )
AGGGCGAGGGATGAGGAACCTTTGATTCCCGGATGGCTACCTGGTCACCC
ATGGTATGAAACNGCAGCTGCGCTGCGNTCAGTTACTAAAGGTAAAAGTT
ACCAACGGAATTTAGAAATGGTAGCACCCAACTCCCGGGGAGTTGGCTCA
CTGGATACATAAGGAAATGCAAAATAATAAGNAACAAGCTAAATATACAA
TCCCTTGGTTATTGTTATCTGTAATAGCTAAAACGAAATTAAAGGATGTG
CTGGGNCGGACCCTGACGCTGGGCCAAGCTCAGATTTCGGTNAGTCTGAG
CTNCGGCCACTAGCCTCAGGGCCGCCCAGAGAGGGAAAAATTATGCTGGG
ACAACAGANAGTACCTCTANGGCCTCTGGTCACCAAGAAAGTAGTCCGTG
TAGGGGGAGGGCAAAACCAAGAAACTACTGAAACCAGGGGATATAGTGTG
AAGGAGCTGTCTCGTTTTGTGGATCGGTATCATCAGCTTCCTGAAGAACC
TTTACTAAAATGGATTGTGAGAGTGACTAACTTAGGGGCNGTGTCTTTGG
NTTTGAACGCTGCAGAGTAGAAGAGCATGTTTGAGTTGATGCAGGACCCA
CAGCTCACTACTGAACAATCACAGATGGCTATACATGATCCAGACACACA
GNAGGTTATTCCCGAGGGGACAGCTAGCCTGGTGGACTGGATAAAAGCCA
CTGTGAAGTTTNTTTACCCTCGGAAGGNGGGATTGCCCANCTCCCCCTAT
AAATGCCAAGTGGAACACCCCAGATGAAGCAGCTGATATGCTTCATATGC
AAGCCACGCCGGATTGGCTTTGATGACCGGGATATTCACCTACTGAATAT
GCCCGTTACCCAGATCATGGTAAATGCTGTGATTAAGGGGACCCTTGTTG
CACGGGCACCCCATGTAACTTTACTGCTGCAAAACCGAGCAACAGTTCGA
GAAGCCTTATCAGATTTGCTATCTCAGCTTCCCTTAGTGACACTAAGAAC
ATTGGAGTAATTAAGAAAACGGGGAGAGACCAAAGGGGAGAGTCAAGGGA
CTCGTCCCAGCAGGGTGGAAATCTTCAGATGGCTGTTAAAAAGTGGGATG
AATAAAGCGGACACTGATGGGGTTGAAAC
>rnd-6_family-13588#LTR/ERV1 ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
AAAAGTTATTGTGTTAGCCATACTTTTGCCCCGATGTTCAGGATGGAAAG
AAAATTNTCTAGTGAAGTTGTCACAGAGTATAACTACTCATGACGCGTAT
CACTGCTTGCTTTAAGTCTGCTGCTAAAAGCACATGTACAATGCTTGTGT
GACAATTGGGTATAAGTGATAAAATGTATAGCCTATAAAGTGTTTCCCCA
TTAGCATACCTCTGNGCTTGTTCACGATGTCTGATTAGTTTTCCCCCAAC
GTGGATAACTAGGCAAATATAAAGGAGGCCTAGCACCGAGGGACATGACT
GGACCCGGGGCAGGCAGCTGAGCCACCCCGGCATAAGGGACAAATATTTT
GATCATCAGTGCTTTCTATTGAAAGATTTGCAATCAAAAGGG
>rnd-6_family-8725#LINE/L2 ( Recon Family Size = 25, Final Multiple Alignment Size = 17 )
TTCTGTTTTGCTCCGCCTTCTCATTTTCCCTTTCTTTTCACATGNGAGAG
CATTTGTTTCCCGCCTGTCTCTCCCGCCAGACTGNGGACTCCTGAGGGCA
GGACCTGGTCTAANGGCTCTGGCACCGCTGAGNTGCTCAGTACGTGTTTG
CGAATGAATGAATGAATGAACGAATGAATGAATATG
>rnd-6_family-3792#DNA/MULE-MuDR ( Recon Family Size = 18, Final Multiple Alignment Size = 17 )
TAATTCACGGAAATGTTACTATAGTGGGTCTAAAATTTACCACTTCTAGG
TATTTTCGCTGTAAGCNTCTTTGCCATAAGCATCTTTGCCGCAAGCATTT
TCGCCGCGTAACTAATTGGCCGTAAGGCAATTTTGCCGTGAAAGATAAAA
TAACTGGTTGACAGTTTGGTTTGACACACAATACAAAAAGCTGACAGATG
ACGATGATTTGCCCCAAGAGTTGGTTTCTTATTTTGAAACACACTACATT
GGAGGAGAAAGAGGCCGAGGGCCTCGAAGGCGCAGAGTTGAACCCACATT
TCCCATAGAACTTTGGAACGTCTATCAACGGACATGTGACAATATGCCAA
GAACANACAACAGTGTAGAAGGCTTTCACAACGCAACACAAAGCTCAGTT
ACAAATATGCATCCTAGTATTTGGAAACTGATACCTCTCTTAATGAAGGA
AGAAATTTTAGTGAAAAAGAAAAAGTGCGATGCCGAACGAGGAGACGAAT
CAACAAGCAAAAAAAAAAAAAAAAAAAANGTATAAAATACTATGAACGAA
AGACTTGGAAGACAAGTGCTTAGGTACAACCCACAAAATAAAATCAGTTA
TTTGCGCAGTATTGCCATGAATCTACACACATTTTAAATGTATTCAAATA
TTTTGTATTTCGCAATAAAGTCTTTNAANTTTAGTATTAATTTTTCATGT
TTCACTATGTCCTTTTTAATGTCCCTCTTTTATTTTTCGTTATTTTATCT
TTTACGGCAAAATTGCCTTACGGCCAATTAGTTATGCGGCGAAAATGTTT
GCGGCGAAAATGCTTACGGCAAAGATGCTTACGGCAAAAAT
>rnd-6_family-7404#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ACTTGGAGGCCAAAATTATGTTTCCATAAAACGGGGATACTCACTTGTGG
ATATGAAGTTCTGGAGCTACTCGTTTCCCTTAGGGTGTTGTTCTTAACCT
GAAAACTGGACTGCATCCCGAAGTTTTTTGAGTTCCCTCCAATATCTGGC
TACGACTCTCCCCA
>rnd-6_family-18461#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AAAATGTCCCAAACCTGGTCTGGGACAGAACTTTTTTGTATGATGTAATT
CACAACCTCCTTCTGGGAAGAAATTAGCATTCCTGATAAAATGCTTAAGC
AATTTTCTGATAAACTTTAATGGGATTAAGACCTNTTCTGGGAACTAGTT
ATCCACCCACTCAGCTGACTGTCAGTCAAGAGTCTAATGATCTTTAACCA
GACACTCTTTTTNTTATATCTAGTCTAACGATGATTATCTAACCATTCTC
TTTTCCTATAAAATGTTCCCACCAAGAGTGAATCTTTGAATCGGCCTATT
AGGTCTCTTTCCTTGCAGCAAGATTGNAATAAAACTTCGACACNTGCTCA
TAACTAAATTGCCT
>rnd-6_family-4617#DNA/hAT-Charlie ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AATCCATTTAGGGAGAGGTGGGTGGAATTACATGGCTTCTCTCAGGGTCA
GGACTTCTTAACTGGAGGTTTTTGAACGGGCTTAGGAGGGTCTGAGAACC
TCTGAAATCGCATGCAAAATTTTACGTANGTGTGTGCGTGCATTTTCTGG
GGAGAAGGTCCACGGCTTTCATCAGATTCTCCGAGAGCTCTATGACCTAA
AGTCAAGGGTCCCTGCCTANAGTNATTCTTGAAGNTTNTTGTAAAGGTAG
AGATCTTACCGANTGAGAA
>rnd-6_family-101#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 16 )
AGGAGCCATTTTTGTGATCTCAGGCTACCTTGCTGACGCTGGCGCTGGCG
GGCGCCATTTTGGAATCCTCCCTCTAGCCTGTTAGCGCCGGTGGGCACGC
CCCACTGAGAGCTCTGCCCACCCCTGCGCCTCAGCTGGGCCTCGCAGCCA
GCCGAGCGACAGCCCCGCCCACCAGCGCATGCAGCAGCCGCAGGCGGGCC
TCGCAGCCAGTCCGGGGCCAGCCCTGCCCACCAGCGTGCTGCAGCAGCTG
CACAGNCAGGCCTCGCAGCCAGCCNAGNGAACAGCCCCGCCCACCAGCAC
GCCCAACAGTAGCTACGGCCCTGCCACAAAAGGAGAGTA
>rnd-6_family-5512#LINE/L1 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
CCCCCGCAAGTCCTTGGCTGAGGGCTGGGCTGCGCATGTACAGGGCGAGA
CTACNCGAGGCTTACCAGAGAGCGGCTGCTACGGGGTTGAGAGCGGAACA
GAGATACTAGAGGAGCAGTGCAGGACCCTTGGAGTTCCGGCCCAGCCAGA
GTGGAGAGACCTCATTAACACCTTGTTAATATCCTAGGCATCCAGCTGAG
ACACCAGAAAGGCCGCGCCTTAGGAGTAAGGACCACGCCTAGAGTAAGGC
CTACTCTATAGACCCGCCCTAACAAAGCCTAAAACCAAGCCCTAACAAGA
ATCTGCAGAGGGGANAGTTTGGAGGTTGAGTCCCGCCAAGTTAGAGGGGC
TTGGGAAACACCTTGGGCTTTCCAANATTCCTCCCTAGCAAAGCGTAAAA
CCAAGCCTACACAAGTTCAAGGTAATTGAACGGCCTGCTAGNACAAGAGT
NAACTATTT
>rnd-6_family-10164#DNA/hAT-Tip100 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
TTTGGGGCACCTAGTTGTTTATCCATCGGGCATTNTGGGCAGAGTGCCCG
GGGCCTACGAGCTTTTCAGGGGCTNACAGAAAGAATGTTTGAGACCTGGA
AGAAAATNTTGGCTCCGAAATACGAAAAGAAAACTNCAAAATNAAAATTG
TTTAANAAATGTAACATGCCAACTTCATTNATTGTTAAATTTAGTATTCA
TAAAAATTTCATTACATTTGAAAACAATTTGTAGGTTAGATTTTTCTCAC
TTCGCAAGAATTCCCGAGTATGCACGGTGACTNCCGAGAAACCACAGTCA
ATCGTAAATGACTTGTAGTCAAATAATTTCAAAAGCAAAATTATAAAAAT
CCTTTCAAAATATTTTNGCGGCGAAAAATTATATTTAATGTGGGACGTGG
GTGCATTATGTTTAATACAGGGAGTGTGTTATGATTTAAT
>rnd-6_family-2956#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GGACACCGGCGCTGGCAAGCGCCATTTTGGAATCCTCCCTCTAGCCTATT
AGTGCCGGGGGCTTACCNGCCCACCAGCGGGCCAGCACCGGCCCCGANCT
CCCCAGGCCCCANGGCCAGCCANNTGGGAGCCGGCCCCGCCCACCAGCGG
GCCGGCACCAGCCCCGCGCCACCCCGGGCCGCGCAGACAGCCGCGCAGGG
ACANGGCCTGCCCCAGCCCCAAGCTGCCCCAGGCCACACAGNCAGCGTAG
CATCACGGNCCGCCCACCAGCGGGCCGGCACCAGCCCCGCGTCCCCCGGG
CCGCGCAGCCAACCGCGCGGGAAGCCTACCCCGCCCTCCAGCGGGCCCGC
AGCACCACATGAGGCACGGCCTCGCAGCCAACCGGGCCGGGGGCCAGCCC
CGCCTACCAGCGCGCCCACAGTAGTCGGCCCTGCC
>rnd-6_family-3811#Simple_repeat ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GGNAAGGACCATAGGGTCCTGCTCCGTTTCA
>rnd-6_family-10617#SINE/MIR ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
GCAGCATAGTGGAAAAATCACGGACTTTGGAGTCAGAGAGACATGGGTTC
AAATCCTGGCTGTAGTTTCTAAGCGAGTCATGTAAACAAGAATACACCTT
AATTTCCTCATTTANAATGGAGNTGGGNGGAGTTATAAGGCACCACCTNA
TNGGGCCATTGNGAGGAAAAGTCAGANAATATGTACAAAG
>rnd-6_family-5200#LTR/ERVL ( Recon Family Size = 21, Final Multiple Alignment Size = 16 )
AATATGGCCTCATTTGTAGTAACTNTGACGGTTNATTTCATGTGTCNACT
TGGTTGGACTACAGTGCCAGTTGTTTGGTCAAACANTANTCTAGATGTTG
CTGTATTTTGTAGATGTGGTCAGCTCGATTTAAGTAAAGGAGATTACTCT
CGATAATNTGGGTGGGCTCATCCAATCAGTTGAAAGCCTTAAGAGCAGAG
CTGAGGTTTCCCGGAGAAGAAGAAATTCTGCCNTGGACNGCAGCATCAGC
TCCTGCCCGGGTTTCCAGCCTGCTGGCCTGCCCTATGGATTTCAGACTTG
CCTAGCCAGNCCCCACAATCGCATAAGCCAATTCCTTANAATAAATTCCT
NAACACATACACGTATCTCCTACTCGTTCTGTTTCTCTGGTCAACCCTGA
CTGATACAGTAACTAA
>rnd-6_family-1920#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CCACCACTCGCCTTGTACGTGCAGACATCTTTGGTGAACTTTATGTACAA
TGCCAATATATCATTTCCCTTAAAGATAGCGATTGGTGCAGAACAGACTG
GTCAGACGACCTGGGGAGATACTGGGCCGCACCTAATGGAAGTTCTTAGC
TTAAATACTTACTTATGACCTTATTAATGTTACTAGCTATATTACTTGTA
TTCTGCCTGTTTTACAAGATTATTGTTTCTTGCATTACCAAATGTGTGAC
TGAGCCTCCGATAAAANTAATGATGACTAGGCGACTTGAAACGATTGACC
AAATATATAGTTCTATAAGATCAATGATTGTAATAGTGTAACTCTAGATA
TGGGAAGAAGCAACAAGAGGGAACCATTTCCTGGACCATAACAGACTAGT
AAGACAGGCGGTCCAGAGGCTTTTGGCTACTGTTAACAGGGCCTAGTCCA
GTAACAGCACGTTGAGTGGCCTATCAACGAAATCCTCGCCTGACCTGGGA
ATGAGCATTCCTAGCGCCGTGGGACAAATTGGTCACGAAATGCCTCCCAA
ACCTTGGTCGAAATTAAGACCGAAAGGGAGGGGATTGTAAAATAAAGAAT
GTCA
>rnd-6_family-5717#DNA/TcMar-Tigger ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
TCTAGTCAAAAACAGAAGCCACCATTCTCATTNTTAGTACAGTCTGTTCT
GCTACTGCGCGTTTCTGTAACGCGAATTAGCTCATGGTAACTGGTAAATA
GGGGAATGACGTCAGTGCAATGCGGAAGTCGCGCTGGTTCGTACGCGATT
TTTCCCAGCCTATGTCTTTGCACCACCGAGTAACAGCAGCTGAACGCAAA
GTACACNAACACAGCTGAANACAGCAAGCCGCGGAGGATACAGNACGTAC
GCGGTGCCCATTCGCCCCACATTCTTCCTCTTGGCTCAGTCTGGCCACGC
GCTCCGTCTTGGAAGTGCTTACTGCGTGTTCTCCCGATCTTTGTGCATTT
CGCCCTCGCCTCCATAACTCAGCAGCCTCAACCCTTCCTTACGCCCCCTT
CCATCAAGCTACCTTCATCTTTGTTTTTTAATTAAGTCAACTGTAGTATT
TNTTTATCGTAGGAATTTAATATGTCTTTTNAACTGTGCTAGTATTTTTA
TTNGGGTTGTTATTTTTGTTAGTGCTCTGGTTACAAAATTTGCATAGGTT
TTGAGT
>rnd-6_family-11762#DNA/hAT-Tip100 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
AACGTCAGGAGAAATGACAAAAGANGCTGGTCTTACACTGCCAGAAGAAA
TCGAAAGGGCAGCGTTTGAATGCTTTGATCATTTTCACCAAGAACTGGAC
ACTCGTNNTAAAGCAATGGATCAAATAATGTCAATGTTCGCTATCATTCA
GCCATTTTCTCTGATTTTTGNAGAAGAAAAACTTCGGAAGTTTTACTAAA
NATAATAGAAATTTATGACGAATTTTCTGGTGAAGATATTTTAGTGATTT
TTCGACTGCGGAGACATTTGAAAGCCACTAGAATCGATAACCAAGACACA
AAGACATGGACAGTATTNCAATTTCTGGAATTTATTGTGAAATGGGATTT
TTATGAATCTCTGNCAAACTTATCNTTACGTTTAAGACTTTTCCTAACTA
TTTATATATCTGTTGCTTCACGTGAAAGAAACTTTTCGAAATTAAAATTA
TAAGAAGTGTTNTTCGATCAACTACGAGGGAAGANAGATGGACAAATCTG
GCTATACTGTCNATCTGAACATGAATATGCGAAGATCAATNTTGACAAGT
CATTGACAAATTTGCAGAAGTTAAAGCTCGAAAANAGAAACTGTAATGTT
ATTATTCATTACTGCGACAGACCAATATGTAGGTATAATTTTTTTCCCTT
TTTCAAAAAATACATTAGTGTANTNAAAAATATCATTACATTTTTCCTTT
TTATTGAAAGTTATTTTGTATNTTANTCATTTATTTTTACTGGCATGATT
ATACATACAAAGTTCAATAAAAGAAAATCTTCACTGTGTTTNTTTTCTGG
CATTATATTATTATTCGTTTCATTTCATGATTATTACTGAAAATAATTTT
GTCATAAGAGGAGGGGATGTTAAAAAATGATCCGCTCCAGGTGTCNAATA
TG
>rnd-6_family-6866#Satellite ( Recon Family Size = 21, Final Multiple Alignment Size = 16 )
TCTCTCCAGCGTGAATCTTCTGGTGCGTNATGAGGTCGGAGCTGTGGATG
AAGGCTTTCCCACANTCGCTGCACTCANAGGGCTTCTCTCCAGCGTGAAT
CTTCTGGTGCTCAGTGAGNNCGGAGCTTTGGNTAAAGGCTTTCCCACATT
CGCTGCACTCGTAAGGCCTCTCTCCAGCGTGAACTCTCTGGTGCTGAACG
AGTGTGTCTGCAGCTGAAGGCTTTCCCGCNTTCNCCGCACTTATGATGNC
TTTTTTCCACTGTGAAAGGCAGCCTCACACTCAGTACCGTTGTTTGGCTT
CTCCCCAGTGCGAGTGACCTGTTGNTGGAAAAATCCCGAGCTGNCTAAGA
AGTCCTTCCCAACCTCCCTACAGGTAAAGGGTTTCCCTGACACGTGGACT
GTGCAGCTCTTCACAAACAAGTCCTCGTCCGCATCNCTTCTGATGGGTNT
CTCTCCANTGTGTTGCTTCTGGTACTGNTGAAGGTTNGCACTGAAATAGA
ATCGTTTCCCACACGCGTACGGTTTCTGCCCGGGGCGTGTTCCCTGGTGC
TCAGCCAAGTGCAAAATGTCTCTCAAGATCGGGCCACACATCTCACAGGG
ATGGGCCTTCTGGGNAGACGGACCTGCCTTNGGAGTCCTGATCTGTGACA
CTCCTTACAGAAATGCTCTGCTCAGAAGGTGCCTCCTCATCCTCTNCTCC
ATGCCAACAACCTGAAAGCAGAGAAATGCTGGTGAAGTACACGTTGACTT
TGGTGAGAGGGGGCAACNCCATCACAAATGTATGTCTGACACATCAAAGA
ATNAGTCCATGGGACTGTTTTCAGGANAAGGGAGTTGGGGTCAGNTTGAG
GAAGCGGCCGCTGTGCAGCACTGGGCCTCTAAAGGTCACAGGATGGNGNA
GGCCTCACCAGGCGAAGGACACGANNATGGTGGAGTGGCACAAGGAGAAG
AGGCANGTCACTTCTGCAAACGGCTTTCAGCAGGATCNTATCTGCTGGCG
ACATGAGATGCTGTGCAGAAGTCTTGTCCAGGCCCAGGAAAATCCGACTG
NAANAAAGTAGCNGGTGCTTAAGGATTATAGACACGTGCACACTTCANGA
CACAATGGTACAGGCCAATGTTGNAAAGCACTGNGGANGGAANAGTGTGA
GGAATNAGTGAGGTACGNAGTCCAGAGAGGTGGGGANTAGCCCTAGCTGG
AGTCAGAATAAAAAGTGACAAGTAGTAGAAATGANAAGTCGGCAAAGTGT
TAAGAATGGGGAAGNANAGGCAGAAATGAGGTGTGGCCGCCACTGTGATT
GGCACCAAAACGCTAGTCAGAGAACAGGTTCCTGGTATGATTTGNACACG
GCCCTGACGTCACGCCCTCCCCCAGNTGCCATTCATCGGGGCCAGGCCAC
GTATGAGCCCTCTTGCTGTGGNTGGAGTCATGTCCANCCTGTGAAGCACA
GGGCTCTTCCTCTAACCCCATCTGAGCAGCTACGCGGGACCTGGANGATN
CAAATCCTAAGGGAAAGACAGGACAGGTNAGTAGCCAGTACTGGCCCAGA
CAACTCAGCAATAGANCACAAGAAAGAAAATTAAATCTTACAAAAAG
>rnd-6_family-2388#LINE/L2 ( Recon Family Size = 29, Final Multiple Alignment Size = 16 )
CTCACCTGTAACAGGGCTGGCTCCTCGGGCCTGGTGTGAGGATTAAATGA
GCTCATGTATCNTAGAAACACTTCGCACAGTGCCTGGCACANAGCAGGTG
CTCAATAAATGCAGCTGCAGTGATAAATATCTGCTGATTGGTTCAGG
>rnd-6_family-12751#LTR/ERV1 ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
GGACTGGTTGCTTATTTCTCTAAACAATTAGATCAAACTGCTAAGGGATG
GCCTCCTTGCCTACGGGCAGTAGCAGCTACTACAACCCTGCTAAAAGAGG
CTGAAAAGTTAACGTTTGGTCAGCCAATCACTATATGGACTCCACACCAG
GTTCAGGCTTTAAGTAAGTTCTAAGGGAACAGAATGGCTATCCCCCGGAA
GNTCGATTCAAGTTCAGGCTATGCTTTTAGACAACCCAGTGGCTACCATA
AAAANCTGTCACANGCTAAATCCTGCCACCCTGCTACCCACAGAAACGGG
GCCCCTGGAGCATGACTGTGTAGAAACCATAGACACGATCTATTCCAGCC
GCCCCTGACCTAGGAAGTGAGCCTCTCCCAAACGCCGAAGAGGAATGGTT
CACAGACGGGAGAGTTTTATGAGAGAGAGAAAAAGGCTGGCGGGATACGC
AGTGACCTCCCAGACCCAAGTCATAGAGGCAAGAAGCCTTACCCCCAGGG
ACTTCTGCCCAAAAGGCCGAGCTGATAGCCCTCACCTGGGCCTTAGAGCT
CGGGACAGGGAAGATCTTAAATGTTTACACAGACTCCCGGTATGCGTATG
CCATCCTACANGCACACGGGGCTATTTGGAAGGAAAGGGGTATGCTTACT
GCGGAGAATAAGCAGGTGAAACGTGGCTTAAGCATATTGAGGCTCCTAGA
AGCAGTGCAGCTTCCAAAAAAGTGTCAGCGATTCACTGTAGGGGTCGCCA
AAAGGGGGATGCAGAGGTAATAAAGGGAAACAACAAGGCGGACGCAACTG
CCAAAAGGGCGGCCCTAGAACCAGTAACTTGGCAACTACCCCTCATACCT
NGGAGGCCAGATCCATCCAATTACTCCCCAATCTACACAAAGGAAGAATT
AGACAAAGCCCGGAAACGGGGCTTCAATAGAGATCTAGGAGGCCATGGGT
GGCTAGTTAATGAACATGGGCAATACTTCTTTCCCCAAACTGCAGCTTGT
CAAGCCATCAGGGAGGCTCATCAAGGAACTCACTATGGGAGGGAAGCCCT
ATATAATTGGTTAGTTGAGGTCATGGTAACTCCCGGCATGAAAAGTATAA
TCAGTCGGATAGTTGAGACNTGCCCCATCTGCACAATGAACAACCCCAAC
ACCAGACCCCCCAGAGGCCCCCAGATAAGGCCCATTCAGACCAGAGGGAC
ATATCCTGGGGAAGACTGGCAGACTGATTTCACTGTCATGCCGAGAGCAC
CGGGCAATTTCAGGTATCTCTTGGTGCTAGTGGACACGTTTTCGGGTGGG
TAGAAGCGTTCCCCGCTAGAACTGAAACGGCAGCCGAAGTGGCTAAAGCA
CTACTAAAAGAGATAATCCCCAGGTTTGGGCTCCCAGGATCCCTACAAAG
TGATAATGGCCCAGCATTCGTGTCTCAAGTGACAAAGGGGATAACGAGTG
CCCTGGGCATAAAATGGACCTTGCACTCAGCCTGGAGACCCCAATCATCG
GGGAAAGTAGAGAGATCCAATCAGACCTTAAAACGAACCTTAGCCGAGCT
ATGCCAGGAGACTCAAGAAAATTGGATTAAGTTNCTTCCAATTGCCCTGC
TCTGCATGCGGTTAGCCCCAAGGGATAAGTTAAAGTTAAGTGCATTTGAA
NTCATGTACGGTAGACCCATTCCCAAGCCCAAGAGAAGGGACACATTA
>rnd-6_family-3932#LINE/L2 ( Recon Family Size = 21, Final Multiple Alignment Size = 16 )
TCTNTTCATTCTTCAGGTCTCAGCTCAAATGTCACCTCCTCAGGGAAGCC
CTCCCTGACCTCTCTGAGCAGGCCCCTGCCACCCCTCTTGCACCCTCCGC
CCTNTTCCATGGTATCTCTCCNTCTAGAAANTNTCATTTATTTGGCAACT
TGTTCATTATTTTTTGCTTTATTATTATTAATTCGTCNCCNTGAGCTANG
ATCGTCTTGCTGTATCCCCAATGCCTAGGGCAGTGCCTGGACCCGAGGGA
TGACATATTTGTTGAATGAATGAATGAATGAGG
>rnd-6_family-4433#LTR/ERV1 ( Recon Family Size = 31, Final Multiple Alignment Size = 16 )
AAAACACTTTCTCCTGATAGACTAAAGACTATCCGAACGTATCCTAGACC
CCTAACAAACGACAATTGAGGTTTCTGTTTAACTGGATATCGCAGACAAT
GGGTACCAAATTTTTCTGAGATTGCAACGCTCTTTATGAATTGACTAAGT
CCTCAGTAAGAGACCCTCTCCTCTGGGAACCCAAACGTGAACAGGCTTTC
TGTAACCTGAANAAGGCTCTTCAACAACCTCCTTCCCTAGACATCCCTAA
CTACNAAAAGCCCTTTTGTCTATTTGTGCATGAGCGATCTGGACAAGCCC
TTGGGGTTTTAACTCAACTTCACGGGAACAATCAAAAACCCATCGCTTAC
TATAGCCTCACCCTTGACCCNGTTGCAAAGGCTTANCCCCCTTGTCTTAG
GGCAATAGCTGCCGCTGCAAAACTTGTTGATGCTTCTGCTGAACTAGTTC
TAGGCTCCCCGCTTGATCTCATGGNTCCTCATGCAGTACAGACGTTACTA
CTGACTGAGAACACACGACACTTTTCAGCCAGTCGATTAACCTCTTANGA
GACTCTATTACTCTCTCCGTCTCACGTTACTATTCACCACNGCNAACACC
CTGAATCCTGCCACCCCTGCCAGAAGGGGGAGCCTCACTGATTATCTTAC
TTAGGGAACTTTCTGTACCTCGCTCAGATCCGGTAGAGACTCCTATTGAG
AACCTCGACCTAATGTTATTTGTTGATGGATCANACCTCAAAANTGAAAC
TGGAGGTTATCAAGCAGGATATGNTATCACTAATCTAAACTCTCCTTTAG
AATATANANTCCTCTACCCGAGATAAAATCAGCTCGGATGGCNAAACTNA
TTGCGCTTACNAGAGCTTGTCAACTNGCCAAAGACCGGAGAGTAAACATA
TATACGANAGCAGGTATGCTTTTGGAGTAGTACATGACTTTNGGATGCTT
TGGAAACAAAGGGGGTTTCTCACCTCTGCTGGAACCNCCATCAAAAATGG
ACAACAAGTTAAGGAACTTTTAGATGCACTCCTACTTCCTAGAGAGGTGG
CTATCGTAAAGGTTGAGGCCCACGCAAAAAGAGATAATACGGAATAAGGG
AAATGCTCTAGCAGATCATTNTGCCAAACAGGCAGCCTTAACCAAGGTTA
TGATCCTANNTAAACCCTCAAAGGATAAATCCCTGGAGGGATTCAAAGAG
GCCATTATAAAATATCA
>rnd-6_family-2539#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
AGAAAAAAGTGATAGTATTCACGCAATGGAATACTACACAGCAGTTAAAA
TAAATGAACTAGAGTCATCAATGTGNATAAATCTCANAAACATAATGTTA
AGCGAAAAAAGCAAACTGCAGATGATATACAGGTATGATACCATTTATAC
AAAGTTTAAAAACATGCAAAACAATACTGTATATTGTTTANGGATACATG
CACATGTAGAAAAAAGTATAAAGANTAAAGGAATGAGANACGCCATACTC
AGGATAGTGGTTACTTC
>rnd-6_family-8320#LINE/L2 ( Recon Family Size = 23, Final Multiple Alignment Size = 16 )
TCTCTGTCTTTTCCCCACTGGANGGTAAACTCCACGAAGGCAGTATCTGG
CCCTTTCATTTACCATTGCAGCCCCAGTGCCTGGAACACTGTCTTCTAAG
ACCTCAACAAATATTTGTTGAATGAATAAATGAATATANTCAGTAAATTC
TTTNAGTGCTGGCCAGGAAACTAGCA
>rnd-6_family-3066#LINE/CR1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AACCAAAGNTATTTAGTCTGGAGAACANATTAGGGAGATTGTTCCCTATG
ATTAGGTCTTTAAAGGATATCACGGGAAGAGGGAGCAGGGGCTCTGNGCG
GTNCCAGGNGGTAAAGCTAGGACCAATGGGTGGAAGCCACAGGGAGGCAA
ATTTCAGCTTAACGNAAGGAAGAANTTTCTAATAGAACTGTCCAGAAGTG
GAATGGGCTGTCTCTGGAGGTAGCGAGCTCCCTGTCACTGGAGGTATTCA
AGCAAGGGCCGGAGGCACTCGGTAAGTGTTGCGAGAAGCGATTCATGACG
TCAGATGGGTGTGGTGGTGGTAGGGANGTTGGACCTGACAGACCTTTGAG
GTCACCTCCAACTATGACTCTACAAATCTGTCATCCTGA
>rnd-6_family-284#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GGATTCCCCAAGCCGCACACAGATCCGTCAACAAAANGCGGAAGCCTTAC
TGGCTCAAGGGGCTTAAGCACAACCTCTGACCAAACACTGGCTGAACAAT
AAGCTACTCTGACCCAGGGACGACTCCTAGGAAGCCAGGCTTAAAAATAA
AATCACANTCATCCCTGGNGGTCTGGAAGACTGTGTGCATGCCCAAGGCT
GCACCCTCTCAGGAGCGATCAGAGNAGGAACNTCNGAGCTACTGGTCCCT
GGCTGAATGAGCGGGGCGAAACATGTAAACTCCCTGAACTGTGANAGCAG
CCTCCAAGCCACACGTACATCCAATGGTAAAGGGTAAAAATCTAACTGGC
TAGGAGGCTTAAGCGCAACCTTTGACCAATAAGTGGCTNATGCTGACCCA
GGGGCGANCCCTAGGTAGCCAGGCTAAAAGATAAAAACAAGGG
>rnd-6_family-6533#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 16 )
TTAAATCCATCAAGGTTGTCCAAATGAGGGAAAAACTCAGTNATGGTTCC
AGAAAAAGAAAACTGGATCGGGATGGAAAAAGACATTTCCACANAGTTGG
GGCAGCNGGCGAAAGCTGAAGTGGGCCTGTGNATNGGATTATAATGTGGA
AACCATGATTATCCCTCATTTNGGGGTTATGTCCTGGTTCCCTGGGAGAN
TGGCCCTGTTTTGGCTAAAACACACTGCAGTATTTGGTGTGAAGTGGAAA
ACTTTGTACTGCTATTTAAAGTTTANACATTTGAAATTTACTGGAAAATA
AATTACTTTTCAAAACAACCATGTCAGTACCATGCCAGAAAATCAGAGAA
GACATCAAACTTTGCTANAGAGGCCAAGACTTACCCAGACCAAGTTCAAC
CAAAGCGGTGATGCTAATCNCTTGTAGGAGTCCACATGGTATTAAGAGGC
ACCGTGGGAAGATTATATTAGGAGCCACTATGTCTTGGGCGCTGTGGATG
ACCTGGATGTAGTGGAAAACAGTGGGATTTTTGAATTCCAGTTTTCCACA
T
>rnd-6_family-276#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AGGCTGCCCTGGAGCACTCGGGTCTGCCCCGGTGAGGACNGGGCGCGGAG
GTGGCACGACTGCCTGGGTCGCGGGAGCCCCGGCGGCGACAGGTGCGCGG
GGAAGCCGGCGGCCACGGGCGCGAGAGATCCGGCCCTAGTGAGGGGCCTT
TCCTGGCGCCGCAGCTAAGGCACGAGAGGGCCGGCCCTGGTGGGGGCCTT
TCCTAGCGCCTGGCGGGCAGCGTGNGAGGGCCAGCCCTGAGGAGGCTTTT
TTAGTGCCTGGCGGCCGGCGCGCGAGGGCCAGCCCTGGTGAGCGGGGACC
TTTCTTANTGCTGNTGGCAGGCGCGAGAAGGCCAGCCCCGGTAGGGACTT
TTCCTAGCGCCTGGCGGCAGGCACGTGTGTGACAGCCTCAGCAGGGGCTT
TTCACAGTGTCCAGCAGCCACGGGCGCATGAGATCCAGCCCTAGTGGGGG
CCTTTCAGCGCCCGCCGGCAGGCACGAGAGGNACGGCCCTGGTGGGGGCT
TTTCCTGGCGCCTGGCAGCAGGCACGTGAGGGCCAGCCCTGGTGGGGGCC
TCTCCTAGTGCCCGGNGAGGCGGGGGCCGGCACGTGGGGAGAGAGAGGCT
GCAATGGTGG
>rnd-6_family-7347#DNA/hAT-Charlie ( Recon Family Size = 20, Final Multiple Alignment Size = 16 )
TGGAGATATTGATCCCCTCAGCCCTCGGGGTGGCCAGGTGGGGGCCCTCA
GCTCCGGCCGCAGCAGCCTCTTCTGCTTACCCCAGTGTGCCGTACAAATA
TNATCATTTTCTGTGTGTCCATGACGTGGAAAAGGTTGGGAAGCA
>rnd-6_family-2953#DNA/hAT-Tip100 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GTGTACCAAGGGCGGGGCGNGGGGGAGGTCTGCCCCGGGTGCAGGCAATA
AGGGGGTCTGTAGAGAATTTAAAAACAATAATAAAACGACTAAAAGTCGG
TCTGCTTTTTATTATCACCATGCGCTGGCAATTCTAAACAATGTCAGTGA
TAAAATACTCCTTCCTGAAAAAATCTTTTGTTGGTCTAAGTTCTAAACAA
TTGCTGCGGTTACTGTTGAGTTTTAATAATGTGTATATGAGCTTCAAATT
AGCACATTTNNATGACCTATCCTATGATAANTCTGTTCTACGTGGAAGTT
AATTCGGAGAACTCCCGGTTTCACAGCCAGTCTGAGACACGCGGATTCAG
CCACACACGTCTGTTTCGGAGTAAGTTCCTAACGGTTCGGAACCGTTCAA
GCTCACTCCTATGTCGAATCTCTGTAGNACTACANACTCCTGCGTNTAAA
CNGTAGANTCAAAATAAGCAGTGATAGCATGGTGATTGCAAANATGNAGA
AACAGAACNTGCGNTANTTCNATTCTGTCATTTGTNNATGTCAGGAGAAA
TGACAGAAGAGGCTGGTCNTACACTAACAGAAGAANTCAAGAGGGCAGTG
NCTGAGTGNCTTGATCGTTNTCACCAAGAGCTGGNCGCTCGATNCATAAA
GCAACGNGTCAAGCAAT
>rnd-6_family-8651#LINE/L2 ( Recon Family Size = 19, Final Multiple Alignment Size = 16 )
CTGTCATCCCCCTCGCTTAAAAACGTCCNATGGCTTCCNATTATANTNAN
AATNAAATCCTAAATCCTTTACACATTCTATGAAGCCCAGTATGATCTGN
CTTCTNTCTATTGCTCTGGACTTCATCTATTCGCTTTCTTCANTATACTC
CAGCCACAGTGNCTTTCTTTCGGTTCCCGAAACATCCAAGCTCNTTCCCA
CCTCAGGGCCTTTATGCCGGATGTTTCCTTTCCACAGATGTTCGCACGGC
TGACTCCTTCTTGCCATTTAGATCTCAGCTCAGGTCACCTCCTCAGAGAG
GCCTTTCTGACCACCGATCTAAAGNAACTCACCAATCGCTCTATCNCATA
GC
>rnd-6_family-373#LINE/L1 ( Recon Family Size = 23, Final Multiple Alignment Size = 16 )
GAATGTTTANTNATATGGGAAATGTTCACAANATGTNNTNAGTAGAATAA
GTAGTTTATAAAATAATATGTANCGTATGATCCAGCTTTTGTATTAAATA
CATAGAAAAAAGACTGGAAGGATACATTGAAGGTGGTTATCTCCGGGTCG
GGATGATAGAGGTTTAGCATTTTTTCTTTTGTGCTTTTCTGTATTTTCCA
AATTTTCTNCAATAAGCACGCATTACTTTTGTAATACAGGTAAGGAAAAC
ANATTTTTAAAAAAAAAGCATTGNTCTA
>rnd-6_family-5440#LINE/L2 ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
GGCCCNAAATCGAACTCCTTGCCTTTCCCCCCCCCCATGCCATCTGTTCC
TCTTCCTGTGTTCCCCGTCTCGGTAACGGCACCGCCATCCACCCAGTTGC
TCAAGCCAGAAACCTGGAGTCATCCTTGACTCCTCCCCGTCTCCCTCCAT
CCGCATCCAGTCACCCAGTCCTGGAAGNACACATTAGCTCATTTAAACCA
CGCAAGGC
>rnd-6_family-1932#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
CTTACATTTGGTGCCGAAACCCGGGAGGGGTACCAAGCCCCGCGGGTTAC
CGCGCGGGCCGCTCCTCCCCTCCCCCAGGAGACAACCAGGGAACCTCTAC
TCATCCACCCGATCCGGCAGAAAACGGGGTAAGTCCCCCTCCCTTGTTCC
CTCCGACCCCCAGAGTCCCTGCCCACCGGACTCCCTGTCCCTAATCGCGG
CCGCGTCAGGGACTCCTCCGTCCTCTCTCCGGGCCTCGGGCAACTGTGGA
GACGTCCCAATTGCCTGACCGCTCTCCGACCCGCCGGGCCTCGGGCGATT
GTGGAGACGTCCCAATCGCCTGACCGCCCTCCGACCTGCCGTGAATTGGA
GACTGAGACCAGGGACGCCTCTCTCCCTCTCCATTCACTCAGGGACAGAC
TGGGGGTCATGGGAACCTCACAATCGAAACCAGATCCTAAGACGCCCCTG
GGGTGTCTCCTAGCCAATTTTACAGCCCTCGGTTTCTCCCAAGATCTCCG
TCGCCGACGGCTTATTTTCTATTCCACTGTGGCCTGGCCACAATATCCTC
TAGACAATCAATCCAAATGGCCTCCTGAAGGGACTTTCGATTTTAACATC
CTCCGTGATCTAGATAATTACTGCCGCAGGACGGGCAAATGGTCCGAGGT
CCCCTATGTCCAGGCCTTCTGGTATTTGCGCTCCCGCCCTTCCCTCTGCG
TCGATTGTTCCACTTCCCAGATCCTTCTTGCCAAACAGACATCTCCTACA
TCCAAGCCCCTAATTTCCTTTGACGATGACCCCTCTCCACTAGCCGACCC
GCCCGAATCTCTCGCCTCTCCCCCCTCCAGAGCTCCTCTCCAACCTCCAC
CCTACCCTGAGGCGGTCCCTCCTCCTCCCGAACCCGCTCCGGCCCCTCCA
ACCGCTCCCCCGCCTCCCTCGACGGTTTCTCCTCCCACGCCCCTTGCTTC
GCCAATTAGTGCACATACACGCTCTCACGACTCCCAAGATCCAAATCTCC
TCTGCCCTCTGAGGGAGGTAGCAGGAGCGGAAGGATTAGTTAGAGTTCAT
GTTCCCTTTTCCCTCCAAGATCTCTCTCAAATAGAAAAGCGATTAGGCTC
CTTTTCTGCCGACTCTTCCCGCTACATCAAAGAATTTCGCTNCCTCTCTC
AAGCTTACGATCTAACCTGGCACGATATCTTTGTGATCCTATCTTCTACT
CTGACCCCTGACGAGAGGGAAAGAATTCAAACTGCTGCCCGAAACCATGC
AGATCAGGTTCACCTTACCGACAACTCCATGCCTGTCGGAGCGACTGCCG
TACCTGGCACCGATCCAGGCTGGACTTATCAGGATGGCCAAGATGGCCGC
CGTAAACGCGACCTCATGATCCAATGCCTCCTGGCTGGCATGCAGGCTGC
CGCTCATAAGGTAGTCAATTTTGAAAAACTAAAAGAGATAACCCAAGAAC
CTAACGAAAATCCAGCTATCTTTCTCAATCGCCTTACAGAGGCCTTAACT
CTCTACACCCGGCTGGACCCCGACACCCCGGCAGGGGCAGCGGTCCTAGC
CACCCATTTTATCACCCAATCAGCCCCGGACATCCGAAAGAAATTAAAAC
GGGCAGAAGACGGCCCTCAAACCCCTATTCGAGATCTGGTAAAGATGGCC
TTTAAAGTCTATAACGGCCGTGAGGATTTGGCAGAATCCAGCCGACAGGC
TCGGATGCACCAGAAGGTGGCCCTCCAAACCCAAGCTCTTGTAGCCGCCC
TAAGGCCGGCCATCTCCCATGGATCACAGCATCCACGGGGTCCGCAAAAG
GCAACCCCGCCGGGGGCCTGCTTCAAATGCGGAAAAGAAGGCCACTGGGC
TCGCCAATGTCCCAATCCCCGACCTCCTTCTAAGCCCTGTCCCAGCTGCG
GGCTAACGGGCCACTGGAAGAGTGACTGCCCTACGACTGGCCCTCCCTCA
GCGTCTCCACGCGGGGGGCAGGCCGACCCAACGGCATTACCACTCGAACT
GCTGGGATTGGCTGACGACTGACGGCGCCCGGACTCGAAGACCCCCATCA
CCCTCGCCGAGCCCAGGGTAACGCTACAGGTAGCGGGGTAAGTCCATCTC
ATTTCTGGTGGACACGGGGGCTACCTATTCGGTCCTGCCTACTTATTCCG
GGCCAGTTTCTCCTTCCCAGATCTCGGTCATGGGTATTGATGGCAAACCA
TCCTTCCCACTCCAGACCGGTCCACTCCCATGTCATATCGAAGGACTCCC
TTTTACTCATTCCTTCTTAGTCATACCATCCTGCCCAGTTCCCTTGCTAG
GCCGAGATGTCCTTTTCCACTTAGGGGCCTCCCTCCAGCTGGTTAGACTT
GACCCTAAGGTCCCCTCCTCCCAACTCCTGCTTCCTCTTCTCGGCCTGTC
TCTAGAACCCTCCCCCTCCTATCCCCCTCTTCCAATCACACCGAACCCAA
TCAATCCCCAAGTCTGGGATACTTCTAAGCCCATAATAGCAACACACCAT
TCCCCCGTCCTCATCCGCCTAAAGGACCCCTCCAAATTTCCATCAAGGCC
CCAATTTCCCATCTCTGAGACTCA
>rnd-6_family-1193#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
AGGGCATCTTATGACCCCCCACCCAACAGAAGAAGGCGACCCAGACCCGG
CGTTTCCCGACCCCCAACCTAGCAACAGAAGGCGGCCCAGGTAGGCTCAT
TCCTCCCCCGGACCGAACGGGAGTCCCTCCGACAACACCACATGAGCCCA
GTAGCACCGGCAAGGGGGACGATCGGGAGCCCCGCTAACAACAAGCGGCC
NGGGGAAGCNTTCTCCTTCCCCGCGGGCCTGAGACTCCCCTTCCCCACCG
AGAGACACCAGGGTGCCGGGCGGCACTGGCAAGAGGAACCTCGCCACAAC
AAGCGGCCAGCCCGGGAAGCNTCTTTGTCCCCACAGGCCNGAGACTCCCC
TCCCCCACCGAGAGACACGGCAGCCCGGCCTAGGGAAGCCCCTTCTACCC
CCTCAGGCAGCACCAGCAGGGACCAGTGGGAGCCCCAGCGGCACCAGATA
AACCA
>rnd-6_family-3596#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 16 )
TTCTGTGTTTTTTTTCTCTTTTTCGTTTTTGGTTCAAGGTAGATTTTATT
CCTCTTTTTTGTATTTACAGATATAAGCATGGAAATAATTTATTCATATA
AATACATGTATGTGNAGGGAATAATTTTTTTTCTGTTTTACTTTT
>rnd-6_family-898#LINE/L2 ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
ATATCTCTNNTGAGNTGACTGAAACACAACTCAAATTCAATACATCCAAA
ACCAAACCTANGATCTCCTCCTTGAGATCTGGTTCTCTNCCAGCGTCCTC
GTCTCTCAGTGAATGGCATNCCATCCACCCAGTTGCNCAAGCCAGAAACC
CGGGAGTCATCCTTGACAATCCCTCTCCCTCACATCCAATCCATCACCAA
GTCCTGTTTTACCTNCTAAAAGTTTCTTAGTCCATCCACATCTTTNCAAT
GACACTGCCAGCCACCACCCTTGTCTACTTTGCTGTCATCTCTCATTTTA
TCTATTACAG
>rnd-6_family-697#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 16 )
GGGAGTGAAGCGTAAGCAAAGCTCCCAATTTTATTTTAATCGCTCAAAGG
AAAGACTGACAGCTACTGTTTCAAATACCAGAAATTATAATGGNTTTCAT
ATTTTAGTAACACTGAGCTTTTGGCAGAGAAAAGAANAAAACATAGCTTG
TTTAAGTTTAGTTATATCCGAAGTNACTAACAATAAGTACNATTTCTAAN
TATTATNTCTTCCTGTCAGTTATGTTTTGTCTTCTTATAATTATCTAAAA
CATGTTTCACGATTNTTGACACAACAAACAGTAAAGGTTTACATTTCAGA
TGGGTAAAAACAGCATNAAAACAGTTTGACAGTAAGGAGTTCTTATTTCT
TTCTCTAGAATGGCAGCACAAGAAATCTGTCACTTAAGTGAGCAGAATCA
AGTTTNATCTTATCGGGGACTTGTCTCAACCTGATTTGTGAGCAAATAGT
TCTTTGTTTAGCCCCTGGGTTGTAAATATTCTGNATCCTTAGCTTCTCTT
ATCAGCAAAGAAAAGCAATTTACAGCATAGTGCCTGAATAAACAAAATAT
TTTTAGGTCCAAGTGATTTNCTTCANAGTTTCCCTTTAATTAAAGCTGAT
TCCCTTCTTAAAGGGAGACTCATATTTCTGATCTCATATTTTCCTTTCTC
GAAGAGGGNCTTGTATTATTCTGTTTCCACAGA
>rnd-6_family-1569#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
ATAATTCCAGCAGGCCTGGAATTGGCCTGAGCTGTTTTGCTAAAGCACCT
GCACGGCACTGACCCCTGGTCAAGGCATGAAACGTACTGATTAATAGTGC
TGCTTTGTAACCATGGGTCCGAGGAGTTTCGGGGCGGTTTGTACCAGCTT
GTCAGCATTGTTTATTGATAACAGTGAGATTGATGATTTGCACCTGGTCT
CGGTGAGACCCCTAGAGGGCTCTGCCACTGGGGCTGGTTACGTAGCAAGA
ATATGCCTACGCGACCAGCAGGGTCCGCTGAGACTCCATTTTGGGCTCCC
TGATCCAAGAGAGAAAGCGCGTCCGGTAGGNCCCTNCAGAGGGGAGGACA
ACTGGAGCTCGCACCTGGCCTCTCCGGACCTTGCTGTGAGGCAGCCTTTG
GCTGTGATGACTNTCCGTACTTTAACGCTGTTGCTATATTGTATCCTTTT
CCTGCAATGAACTGTAGATTTGTAAGCATTGTCATTTTGGGTCCTGTGAG
TCTTCTTCAGCAATCGAACCCTAACTGCCACCATTA
>rnd-6_family-1766#DNA/hAT-Charlie ( Recon Family Size = 20, Final Multiple Alignment Size = 15 )
GCAGCCCGCAGACGTGTTTTGTTGGCCTACACAATGTTTTAAAAANTTGA
GCCAACATTTAAAAATTGGGAGATTTCACATAAAATGTCCAGATTTCCAA
CTTCTCTTGAAGAGTCGGAAGATCTGGGGATT
>rnd-6_family-14843#DNA/hAT-Tip100 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
GATGTGCAGGTTGTGCACTGCACAACTCCAGGAGGCGCCATTCACNTCGT
AGTCATCGTAGATTTNTATGNTTATTACGACAGTTTTCCAGCAGATGGCA
GNAAAGTGTCTCGAGGAAGGGGCGTCTTCTAATTTGCACAAAGCTGCCA
>rnd-6_family-4454#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CTGGGCTCTGAGAGAAGAATGAAATGTCTGTTCTTGTCTCTGACTGTTTC
NGATCGAACTCGACCTCGGTCAAGGGTTGTGGAGGGTGTCAGAAGTCATG
CACGGTTTCCTCCTGCCCTCCCATCTGGGAAGGGTGATGCTGGCCCTACT
CTGCCTGGGCAGCCCCAGTTCCAGCACGGGCCCAGACAGGAGGGCACTCA
GTGGACATGTGTGGATTTATACAGGACTGGGTGCAGCGACCTGCCAGCCC
CCTGCCTTCTTGAGGGCTGGTGGGGCCCTCCTGGCACTGGAGGCATCCTT
TGTCCCATCTGAGTGGGCGTGAATAGATGATCAAGTCTCAGGCAGGACAG
CCCTCGACCTCTGACTATCCAGGCAGGCATCTGTGGTCCTCTAGCTCAGT
CCAGCCTGGGCATTGTCANGCCCTCATGTACAGTTACGGAGCTGACCATG
ATGCCGGGCAATTCAAGAGCTACCTGGGCAGTGTAGACATTCCTTTGAGA
AGTTTCAACCACCAACATGCATGTGGCTGAGAAAAAGGCCTCCCGCTCAC
GGCCTCATAGGCTGCCAAGAGAGGTAATAATCCTCTAGACATTGGAGTGT
GGCCCTGACGCAACACCCATGCAGCAGACCATGGCCCTGCAATCCTCTGT
CCTTTCGGTCGTTAGAAATTTTGACATGCATATTCATTAAGAATCAAAGN
TATGGGAGCAACTGGACCTCCCAGTGTGAGGTTCACACTGNNACTGCCAT
TGTCTTGGAGAGCCATATGCATCCATGTGGCCTCTGGAAAGCCTGCCAAC
TATGGGTTCCATGGCATGGAATAATTCTCGAGCCTCCCGTTACTTCATTG
CACAAGAGTTTCCTTACCACCCTAGCATTTGGTTTCTTCCTCTTAGTAAA
GGAGAGAGAAGAAACTGGAAAAGGAGCAGTATTGTTTTTCAGGGATGGGT
AATTAATATGGCCAGGGAGATGGCATAACTCAAGGGCTCCCACCTCTCAG
GGGCAGGAATGAGGTCTGTGTGTCTTCTNAGGGCACATGGGCTGTTCTGG
GCCAGCCTCTGAGATGTGAGGACCTGATGCCCAAGGCAGGAGACTTGAGT
TTACCAACAACAATGATCCTGCCTTTTCAGCAAGTGAAAGAACTTTTTGC
AGTCTTGGGAGGGAAGAGCACTGGATGAGTAGCTGCAGNCCCTAAGTGGG
CTGCAGGACCCTAAGTGAACCCCTTCCTTCCTTTTGTGCCAGATTCTGTG
CTGTGCANTGAGCTNTCATTGACATAGAATCTGCTGCTTTCTCCCAGCCA
GCATCTGTTCTCATGCCCAAGTCAGTACCTCAGTTTTCCTTTGGGAATTA
CATNTCACCTGCTTCCAGTCCAAA
>rnd-6_family-1475#LTR/ERVL-MaLR ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
ATTGTTTTTGCCTGCCCAGCATCCATTCCCCCTTCTTCTGGTAACAGCAC
CTTGNTTTCCTTTGGGGGAATTCATCCTTCCTCACTCTCAGTCCGCGTGG
TTCGGGTGGGGCGACCCCGGCTCTGGGGATGGACACGTGACCCTGGCCCG
GCCAATCAGCATGTCCCATTCTCCTGGCCCCGTGATTGTTCAGGGGTGGG
CACGTGACCCCGNCCAGTCCAGTGAGAGNCA
>rnd-6_family-2182#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
GTAATNGGAGGATTTCCAGGTTCCCGTAGGATAATGGCGGCCACCTAANT
CCGAATCTCTCCACAAGATCAACGAGAAGAGCAAATAAAACCACCCATAA
CCCACGCCTACAGCATAACTAGGAGCATAGAGAATACTATGAACTTCAAN
TTACATNTAAGTAGGAAATAAAAACCCAAATCAGCAGAGCCAACTCCGGA
GCTCACGCCGGAGCGGAAAGTCAAGCGGGGACTACGAGGAAAAGAGGAGA
GAAGTGCAGGATGGGGTCCTAGTAGTGGCGGAACACAGATAAATCACCCC
CAGAAAGAGGGTCCCACCCTGAGTGGGGAAATACTGAGAACAGGTCTGAG
ATCTGGAGGNTCAGAGCACTGGCTACTGAAGAATCAAAAGGAAGGGCTTG
AAAAGTATGCGNGACCAGAGGCGGCAGTCTTGGGAAGGCACTGNTTCTGA
GGGGATGGAAGATACTTGGAAGGAGAGGCATCCCTTGGAGGCTTGGTGGT
AAAGAAGGAAGNAACGGGTGGAAATTAAGGCAAAAATA
>rnd-6_family-391#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TATAAATGGATGTATAGATTATGTGATCTGGCTTTCAGTAAAGGAACCCT
TGCAAAACGGGCAAAGAAAACCAGATTGGAGATAACGCTAATGATATAAA
CCTTGCCACTGCCAGAAAACAGCGAGCTGACCCTGCTCTGCCACTTGGCT
AGACTCCGCACCAGCCACTTCACACCCCAAAATGTGTTCTGATCAGACGG
GAGAGCAGCAGCTGAGTGAGCGAGAAGGATCCCGCTTTTCAACAGAAACT
TGTGCTTTAGAGAGAGCACTTTGAAAACGGATGTTTGGAAAATGTTTCCG
TCGTCNCGTGATTTTGTTGCTGAAAACGATGTGACTGTATAAAAGCTCTT
GTATCTGCACANTTTTAAAACTTGGAAACAGAACTGTTAAAACTCATTTT
TTNAAACGAGCCTTTCAGTGGATTTTGAACCNACTTGTTAAAAATATAAA
AACGCAACACCTCATTAGTTCGCAAGAANAACTGATTGACATCAGGGAAG
ATGAAAATTTACTAGCCGAATTTCAACAAAAACCTTTGCATAATTGGTGG
ATGGGACTGAAAAATNAGTATCATGATTTAGTNAGCACAGCAAATGTCAT
TCTTCCATTTGGATCTNTGTATCTTGTGAGGTATCTTTTTCAGTTATGNC
AGCCACTAAAACCAAGTATCGAAATAACGTTAAACTAGANTCCAACCTTT
ACTGATCACAAAGTGTTACGAAGTCAAGAATTTTTAAAAAGCATATTCAA
TCACACTGTTCTCACCAAAAATTATTTTAATTATTAATAAATAAAATTAT
ATATACGANTTACTTTCAAATATATCCCATCCTTTTAAATTTCTACTTTG
TATANGTTTTATAATATACATAGCATAGTAGTACACGTATATATACATTA
ATTAAATANAACGTATTGGGGGTTNGCGTGCTGACNTTTTTCTGCACAAA
NAATGTGAAGGTATGNAATTAAAA
>rnd-6_family-754#LTR/Gypsy ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TATTTGAAAANTTATNAATGTGCTTTTCTCTTTTGCCTTTCTGAATACAT
GACCTTCGCCTANCTGGCCCGAGGCATCCATCTCCGCCTGGGGAGAGACT
AGGATGGAGGTTTGACGCAGAAAGACGAAAGAAAAANGNTGTAATATTNA
NCTTCTGACACGCAAAATAGGATTATGCAGCAAGACAATAGCCTTGCAAG
CCAGGCTATTGTCTTGAGAGAGAATTTTCCAAATTCCTTTATTTCTCCCC
T
>rnd-6_family-3230#LTR/ERV1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TGGCTTCTCCAGCTGGCTCTCCTGTGGACTTGATGGTTTATTGCGACCGG
ATTACAACTAGTTATACTAATCATTGTTTTAATTTGTTCTTTGTTTCCAA
ATTGTTTATGCTTTGTGTCTCCCTGCTGCACTATGNCTTTGTCAATGTTA
CTAGCTACATTACTTATATCCTGTCTATTTTATAAGATTGTTGTCTCTTA
CANTACCCAGTGTGTAACCAGGCCTCCAACAAAACTNATGATGGCTAAAC
ATCTTGAGGAAATAGATCACATTTATGACTCTTATAGAATAATTGTAATA
GTGCGATTCTAGGTATGGGAAGAAGCAACAAGGGAAAACGTTTCCTGGAT
CATAATAGACTAGTAAGACAGAGGATCCAGAGAATCTTTAGTTATCAACA
GGGCCTAATCCAAAAATTAGCACCTGGAGTGGCATATCAACAAGAATCTT
CGCCTGATCTGGGATGAGCCTCCCAGCGCCGTGGGACAAAATTGGTCATG
AAATGCCTCCCAAATATTGGTCGAATTTCTGACCAAGAGGGGGATCTGAG
AAATGGAATATTTCCTGCCATCAGTCATCAGCGATTGNAGC
>rnd-6_family-1070#LINE/L1 ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
AATTGTGATACTNAACTTTTATTGAAGTAAAGCACACTAAATCAAACCAA
TTACAAAGATACATGTGTCACACCAAGAAAACATTTTCAGTTATGCTGAC
AGCCCAAAATGCTTTCAATTTTTCAAAGACAGTTTTAATGACATGGGAAA
AATGCTCACGACGTTAAAATGAAAAAAGCAGGATACAAAACCGTATATGC
AGTATGANCTCAACTATGAAATAATTTTAAAATNTATACATTGAAAAAAA
AGACTGGAAGAAAATACGCCAAACATTAACTGCAGCTATCTCTGTATGGT
NGGAGAACGAGATACTNNATTTTTTACTTTTTCGAAATTTTCAAATTTTC
CAAGAAATTANTATTTATAAATCAGAAAACTAGTGAAAAAAANTAAAACT
TAAATGTTAAACTGCTTCACAACTACCAATGGATTATTAAGGAAGTACTA
GGTGAGTAAACTGGCTTTGAGGCATGGCTACATGGACTCTTTCACCTCAG
TGAAAAAAAATGTCCAAGAAAATTTTACTGCAAATTCATAACAGCTTTGT
ATTATTAATGTTGGAAGCTTTAGTTAAGTCCTACCCNCAGAAANTTCAGT
AGCTAACATCTAATCTTAATATACAGAAAATGCCAACTTTTCATCAAAAA
TTTAATGCTATCNTAATTGCCTTAATTGTTCTTGCTCTCAGAGGCTGGTC

>rnd-6_family-3942#rRNA ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
CTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTAC
GAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTGGGGT
TTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGG
CGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTC
TTCCTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCAC
TAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTT
ACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTACGAGAG
GAACCGCAGGTTCAGACATTTGGTGTATGTGCTTGGCTGAGGAGCCAATG
GGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAA
T
>rnd-6_family-8075#LINE/L2 ( Recon Family Size = 21, Final Multiple Alignment Size = 15 )
CCACCNNATCTATACACCCACCAGCATCCATACCCACATANACTTACTNT
CTTNACTTGNTACTATGGATGCAAGTCTATGCTCTAATCAAGGCCAGCCC
TCCCCTTGTGCACTAGATCCCGTCTCCTCTCACCTACTCAAGGACATTGC
TTCAGCAATTCTTCCTTCTCTCTTCTANATCATCAATTTTTCTTCTCTAT
TGNATCATTTCCATCAGCANACAAACATGCTNTTATTTCTCCCATTTTAA
CTGTCCCTTGACCAACTTCCTCTAGCTATCGCNGCAAAACTCCTTGAATG
AGTTGTCTGAACTTCCTGTCTCCAATTCCACCCTCCCGTTCNCTCTTAAC
CGCTCCCATCATGCCACCAAAACTCTTATCAAGNTCACCGANGATATCTA
CGTTGTNAAATCCAATGGACANTTCTCAGTCCTCATCCGGAACGATCTAA
GTATCCCT
>rnd-6_family-365#LINE/L2 ( Recon Family Size = 27, Final Multiple Alignment Size = 15 )
AGCCAGTCTATCAGCAAGTCCTATNGNNTCTGCCTCCAAAACANCCAAAT
CTGTCTCCATTTTCTCTTCATCGCCACCGCTCCTANTCNAAGCCACTCAN
TTCTCCCCTGAATNACTGCCATAGTNTCTTAACTGGTCTCCTGGCTTTTC
CTTCTCGATCCATTCTCCACACAGCAGCCAGATTNATTTCCTAAAATCAG
ATCACATAACTCCCTTGCTTAAAATTCTTCAATGGATTTCCGTTGCACTT
AAAATAAAATCCAAAGTCTTTACTGTTGCATGTAGGCCCTGNATGACCTG
GACTTCTATTCCTTTCCAGNCTCGACTTAGGCCACTCTTCCTTTCCTCGT
TGAGCTCCAGCCACACTGNCTTNTTTAGGTTCCTAGAACCCTNTGGATCC
TGT
>rnd-6_family-2502#LTR/ERVL ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
GAGACCTCCTGTGTGAGAACTTAGAGCATTGGCNGGGGAAAGTTCAGGAA
CCNGAGANCTGGAGTATGGNNTTNTGGGGATGGGTCCGGATGANCCTNAG
CACCCCGANCCNCCAAATTCCNCTGNNCCNCCCTNGCCAGCAGGNGGCAN
CCCCTCCTTNCCATGTCTGGTGAGGCTGAGCGTTGCCCCACTTGGAGTCC
TTGNGGTANTTGNCACATNAGGGGNTGTCCGTTCNCCNCGCAGACAACCT
NCNCTACCGCTCCNAACCTACAAACCCCAGAACAAGCCTTAGGGAGATNA
GATACAGTCCCAACGTGTCACGGCTGNAATACTTATATANGAAAAAGTTG
CAAGATTTTGCTAATNTACAGTAGAAATCTGGAGAAATATGTGTGGAATA
GATTCTAATGGTGCTAGACCANGGAGGAAGGAANATAATTTTAGGTCGGG
CTGAATTTATCGATATGGGTGCACTTACCAGAGATTCTGGATTCAATATG
AGCTTGAGAATCGGGGCTCTAACAGTNTGCTCGGTTGGTTGACTGAAACC
TGAGNCTCTTAAATGAAATAAAGTCATGATCCAGAAATTCCTTGGTATAA
TATTGAGGAAGGAATCCAAAGACTTAGGAGTGGATTTATCATGTATGANC
NACTCACTCATCCCCTAATTATATATCCTGGGAGGGCCCGGAGAACACTG
TCTNTACCAAGCAGCTGAGAACCGCGTTGGTGAGGACCCATAACTGGAGC
AGCGGCAACCCAGAGNAGCTCTGTGNTGANTGTCTTCAGTAAACCGGGNA
NGAAGGTGNGANATNCTGCCATTGAAATG
>rnd-6_family-11076#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
CCAGGAGACCTTTAGCCAAATTCCCCTTCGGCCGGCCTCTAACACTTTAC
ANTTAATANTTTTTTTCCTTTTTCTTGGGGAAACGAATGGAATTAACAAA
TTGTGACTATTAAACAAGTCACACCGAGATCTGTGNGCGCCTTTCCCAGA
GATAAATTNTACATATTGCAGCAAACGAAACATGTAATGCTTGCAAAGTT
CCCGTGAGAAGTCTCTGTCCAAAAANTGTGCCAGCTTGCTGATTATAGNG
TCGTTACGNCAAGAACATCCGCGCCTCAGATGAGATNACGGGGTCGTGCC
GGATCTTCNCTGCNGATCGCTTCCACCCCAGAGNANCTAGGAGGGGGTCG
GAACACTTTCCTTCCCCGAAGCCACAGTCTTCCAGTGTCTGTAGCTGCCC
AAATNTNCCCACAGAACCAAAGCGAGGCAGGAGGTTTCCANGAACGTCCT
CCGACACCTGGGAAAAAAGAAATCTCACNNGCAGAGGACCGAAACAGTAT
GGGTAATGCCTAAATATCGTGTAATATTGTTCCAAGTAGAGAATCGAAAG
AGGCAGGAGAGAAACTCTTTGATGCTCAAGTCTCTTGGTGTCCTGAAACT
TCTGTCTCATTGCTTANCTTAAAGAACCAAAATTAGGCCCGNTTCCCTAG
CA
>rnd-6_family-6327#LTR/ERVL-MaLR ( Recon Family Size = 25, Final Multiple Alignment Size = 15 )
AATAAAGNTTCTGGGAAGTGTTTCTTATACTTATGTTNTCCTGATAAAGG
GACAACGGTGATGGCGCCACCCCTNCTCTTCTCTTTTACCTCTCTTCTTT
CTACCTTGGATGCGANCATGGAGCANTAGCAGCCATCTTGCGACCATGAG
GGAAAGGCCAAGAGAATCACAGAGACACCGTTGAACTGAACCAACGCCAG
CAGCCGCCTACCTCTAGACTTNTTGTTATGTGAGAAAAATAAACATCGTT
TGAGTCACTGTTAATCGAATTTTCGATTACTTCAA
>rnd-6_family-2080#DNA/TcMar-Tigger ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
AGCCTGCAGAACGTCTCCCCGGTTAATATTTTCNCAGTAGAACGCCTCTT
GGTTTTTAATACCCAAACTCGTAGAATATACGTATCTCTCAATACAACGT
TTTTTGGCTGATGTTTATATAGGAAAAATNTATATTTACGTCCCCAAAAC
TCAATACAACATTTTNAACAAAACGACGTGTAGGAAAAGTCTCGAGTTAC
ATTCCAAATACAATTGGTAAATCGGTAGANCGTCAGAGTCGCGGTAGATA
TTTTGAAAAGCGTGCCAGTGTCAATCAGGGAGTGTGCTNCTGGAGATGTT
GCCAGGCGCTAAGGAGTGNCATGACGTTACAGTACACAAAGCAACCGTTT
GTTAACAACCATATAATTGGTGATCGGGAAGNNATGTTTTAAGCATTTTA
CATCCTAACATGGTACTTGGCGTTACTTGTGCACATACGGGTATTTTTNT
GCGCTTTAGGGTTTTGNGTTGACATGTGATNCATCGAAATTTTTCCCATT
TNAAATAACGGGAAATAGGCTCCCGNTTAGCGTTTTCGCGCAGAACGTTA
NTTTTCAGGAACGGATTACTGACGTTAAGCGGGAGATATCTGGTATTATT
A
>rnd-6_family-10831#DNA/hAT-Charlie ( Recon Family Size = 19, Final Multiple Alignment Size = 15 )
GGCCAGTGGTTTTCAGACTGTGTTCCGTGGAGCCCTAGGGTTCCAGGGAN
GTCTCGAGGTGCCCGGAAGGGAGGGGNCAAGTGGGAAGGGGGGCCCCGGG
CCCCCCATCTCGGTTTCAANCAGNTCCGCTTTTATCTGTTTTATATATTG
GGGTTTCCTCATAAGATTTCATTTGAAAAAGGTTCTCTGACTTTTAAAAA
GTTTGAAAACCACTGCTCTAGATCAAATTTCTGNGCTATGGCNAGNATNT
CAGATCT
>rnd-6_family-5090#LINE/CR1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TATTAATGATTTGCAAAGGAGGACACAAATCATGCTAATGAAATTTGCAG
ATGACGCTAAATTGGGAGGCGTTGCAAACACCAGTGAGGACAGACAAAAT
GGACCTGAAGNGGTTAGAAATATGGGCAGGAAACGGAATGAGATTCAACT
TGGAGAAATGCAGNTAATACATCTGGGGGAAANTAATCCGAAACACAGNT
ATTCAATGGGCGGGGAACGTACCTGGAAAGCAGTAACGCCGAGAGACCTN
GGGGTGACGGTGGATAGCAAATTAGATATGANCTCGCAATGTAATAC
>rnd-6_family-7803#Unknown ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
CAGGGTTAACTCAGGGCTCAGACTGGACAGAGCCCACTCTCCATCCCCCT
GTACGTGAGTTACAGGAGCCCCAGGAACTGAGGAGGGGGTCCCTGAGGGG
AGGCACAAGATAGAAGATGCTAGGCATTAACATGGCTGCATTCATGTTAA
ACGTGCCTGAANTNCANTCACACGAGATGGTTTTGTCCTGTATGTACATC
GGCACCTTCAGTCTGAACTGCAGATCTTTGGCTTCACCANCTCCACTGAG
AGCATTAGCTTCACCTGCTGTGGACCGTCTCCTATAGGATTTCCAGAACC
ACAAAGCATCGAAGCTTCACAGGACCCAGGGTCTGTGCGCTAGCGTCCGG
GTGGCCCTCANAGCAGAGCTGCCCAGCTGCCCGTCAGAACCCATTTCCCT
TTTTCCTGTTCACGGCTACCCTGCACCTCCCAGCGACCTTCCCACCCCTT
ACAGCTGGGGCGCAGTGTCTCGTGTTACCAAGGGGAAGGGGTGGAGGGGT
GGTGAGGGCCTTGGCCAGCCTGCATCCTAGGACGGAGGGCATGANGCCCA
NATGGTCACCCCACCCTGCTGGTTAGAGCCCTCACCTGGAAGCAGGGAGG
AGAAACAAGGGGGACAGAGCCTGGGCCCTGACACCCACCTGCCCTGGACT
CTCACAAGAAGGGGACAGAGACATCTTGAGCTTCAGCCCANTTTTGGGAG
ACACTTTGTTCCAGCAACAAACCTTTGCCCTAAAAGCCAAGGTGCTTTAC
AAACCCCTCCCCAGCTGTCACAGAAAGTCAGGCTTNATCTCATCACACTT
TTCTCAAACCCCAGCTCACGNTGAGACCACCGCTCAGGTGATGGTGCTTC
AGAGCAGCCCCTTTAAAAGATCCCTGGAGTTCAGCTCTCCCAGCCCTGCC
TTCAGTTTAAGGGAGAAGTTTCCTTGACAACCTTGACAAACCTGCTCAGT
TTCCTTGACAACCAAGCTTCGCAATCTCCCGAACTCTTCTCCTTCAAACA
TTCCTATTCTAGGCTGGATGAGCCTAAAGTGACAGTGCTGTCATCACGTG
CCAGAAAGCGATTCCTCCAAGCCCGTAGTTATTGGTTACATGATGCTATT
GATGATGAAATCCCAGAAGAGCCAGCTTTGCAACGTAACCACTTCTGGAC
TCGGCACTGGGTCCCTTTCCACGGACAGAGTGGAGTGGCTGTTTCCACGG
GCCCCGTGGTGGAAGAGCTCACTTTCTGATGAAGCCAGGCCTTGATCCTT
TCCAGGTGACTCCAGGGTCCTCATTCTCCCCAGACCCCCCCACCCACATG
GCTGCTGTCTGTGCCAGTCTATACGGGACCTTGGTAATCTCCTAAAATGA
GGGTTATTTTATACACAG
>rnd-6_family-7126#LINE/L1 ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
ATGCAAAATATTGGAAGGGGGTTCCGATTCCTGCCAAGATGGCGAACTAG
CATGGGCTGCCTGGCTCCTTCCCCAAAATCAACCCTGGAGAAACTATAGA
AGCGAGGGAAACTGGANTCCAGAAACTAACAATAACAANAATGAGAAACC
CCCGGGGAGACAAGGCATAAGTCTTGAGCTGGTATGAGTGTCAGTGGGAG
GCGAGCGGCTGCAGCCTGAATGGAGGGCTGCGGGAGGCGGGTGAGAGATG
GGTTGGAGAAATG
>rnd-6_family-2501#LTR/ERVL ( Recon Family Size = 31, Final Multiple Alignment Size = 15 )
TTCCTTTCTGCTTNAGTTAACCAGAGTNGGTTTCTGTTGCTTGCAACCAA
AAATCTTGATNNATATAGAAATCGGTACGAGGAGTGGTTGCAGGCAACAG
ACTCTNAGGGAAATGAGGGGAATNTGGGATTGGTTATCTGGCCTAGTTGG
AGCTGAGGGCAAAGAAAATCCACTCAGTATTGAGGGATGAGAATTTGNCA
TACCATGACGTGCAGTGGCAAAACAGCTAATTAAATTATNACANATTGTC
ACCTGGGAATGAAGTACCATTGAAGAGGTNGCTGCTNTGAGAGAACAGTG
TNAAAGCGCATGAGGAATGTNCAAACTGTGAGGGTGGGTTGACTNTTTCC
AGCTGTGCTAGAGAGCTTAAAGAAAAAGACAAGCTCAGATTTTTANGTTC
GTAGCTCAAGGCACAGGTTAGAAAGGTCCAGGGAGTTTCTATGANTGNCT
AAAAGAATCTCTTACTCTTTCTGAGCCANGGGGCTGA
>rnd-6_family-7247#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GTGGCTGAACCACACTGACTCCATTTTGTCAGCTCCATCTTAGGCCCACA
GTCCTACCCCCTCCCCTTTCTGCGTGACTGAGCTTTAGCCTACTCACAAG
GAATGCGCCCAAGCCAGATAAGTTCCCTATCAACTTTTACCCTTGCCTTC
ATCTGATATGAAAACTGGAAGAATGCCTTTTGCTGACGCAGATGGTTAAT
GGTCATGAGACCCCCGGGGGGAGGAAAAACCCCCGGTCCCATCGGTGCGG
ATGTGCTTCTCCCTTAGTAGTCAGATTCTATTTTTAGCTTTGGCCCCTTT
AAATCCCCCTGTACCCCTTTCGGCGGCGCGGAGTGCAGCTGCGAATGCCT
CCGGATCACCGTCCGCCCGATCCTGCCCGTATGTAAGTTACCCACAATAA
ACTTCATAATTGCACTTTATGGAGTTGCCCGCTTCGTTTTTCGGTCTCAA
AGTTCCTTCTCAGTTCGGAGGATATTATTCAATATCCCCGCC
>rnd-6_family-1305#snRNA ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
ATGTGAGGGTGGTCTGGCTGCGACATCTGTCACCCCACTGATCGCCAGGG
TTGACGCGGCTGATCTGGNTGGCCGGNGAGGTGTCCCCTTCTCTCTCACT
GCTCCACGTACATCCCTCCCGAAGCTGNAAGCTCAGCGGAAGAGGATGAC
CTTCCCAGATAGGAGAGGACAGTTCTTCGGTCAAGGGTATACGAGNAGCT
GCGCTCCCCTGCTAGANCCTCCAAACAAGCTCTCAGGGTCCATTCGTAGG
AGAATGTAGGNTAGTCAAGCTTCCAAGGCTC
>rnd-6_family-355#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GCACATGTCAGAGATTTGGGTCCTCACAGGGCCCCTACGTACAAGCTTCG
GAAGAATCAACAGCAGCTTCANTTCCGGAATTACTGAAGGTAGTCTCCAG
CTGGAACAGGTAAAGAANGTGGGAGNCTCCCTAGGANACAGTTTCTTAGG
CCTAAGCAATTCCATAACAAGGGACTTGTCAACTAGNNACCGCGGCACAA
GACTGAAAATGCCTNCTCANAGTTCTACATAAGGAAGTGCTTCANTAGAC
AGAACCTATAATCGGTTCAAAACTGCGGTGCCAGGGACGGGGGTCAAGGG
GTAAATGGAAATTAAGAAGTTTTGAATACGCTGGATGGGAAAGAAAGATA
CCTCAAANAAGACNTGGTGATTGGGCTGCCACCATCGCAAATTTCTAAAC
TCCCGAAGGCACAATATCTCAAGTGCCACTTTCTGAGTGACAGAACNNAG
GTAGANTTCTCTCCAGATACGGTAAATCCATGCCCAAAGAAGATTAACCT
NTTAAGGGATTCTCCCAGTCGAGTTTAAATATTGAGTCTCGGACAAACTG
GCATCGGTCCACTGGCATCCTGTGAAGCTAAAACAAAATTTTCCGCATTT
CCTTCTCTCAANCACCATCGGGTTTCTGCCATGGCCTTTGGCAACACTAA
GTTCTGGGTTTTGGGAANATAATTTTGCCTGGGATGACTTAGGGCTGTGT
NTTAGCTTGTTTTCTACGTTTNGTAGGTGCGAGCAGTGCTGTGATAATAT
CTTGTATNTCCTATTGANCCTTTGAACTCTTTAAAGAGTGAGGAATGAGA
TTTGATNTGGAACTAATTCAACTCTCGAGGNCCTGAAGGAACCTGCATTC
TAGTGATGGAAAGCNCAGGCTGCAGCTGCTGAGGGAACACGGCTCCAATT
GATCTGGCCGAGACGGAGCACGTTAGAACTGAGGAGAATACGAAAAAGGC
TTCAATTTCTTTGGATTTAATTCACAAGGNCAAAANATTTAACTTTGGAC
TTCAATTACTTCTAATTATTCAGAGTCCGAACTTCAACTTTCAAGGGAAT
TTAATCTTGGATCTATTTTCTCCCTAGAAATTTGATANTGAAAGGGAGTT
TATATTTANATNTGGGGCATATTTTACTACTGAAAATTAACGTGTCTTTA
AGTTTCTTGCACACTTATGAGCCGTATTGGGCGGTGTACTTGAACATAAT
TTGAACTGGGAAAATAGGNAGNNAAATTTAACCTGGNTGCCGTGGCCTTA
GAATTAATTTAATTANTGACCCATTATTCAGTGGGGAACNATCTACGCTG
CCATCTGCAGCCNCAGGAGGGTCCTTAATGAAGGAGCGNTGGGNATGGGG
GAGAGCTTTATGAAGATAGAATCAAACCACCCTAATGGGCTGCCACTCTC
CTCCTCCAATGAGATAATCATTCTGGTGTTGACCATATATTTAGGTTTAA
GCCAAAGGAGTTAAGAGAACCAGAGTCTTGGAAATGTTGATTGGAAAGCA
TCCTTTACCTTGGTTCCTGTTTCCTGTTTCCAAGGGAAGAGACATCAATC
AGTAACCTCTTGGCTTCTCTCCCCCTGTCTTATTTTTTCCTCGCTAAGGC
AGATAGAATGAATTATCAGATTGGTGTGACAGGGA
>rnd-6_family-900#LINE/L2 ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
CCTCCAGTTTCCCTCCATCTCCCCGAGTCTTCCACAGGCCCTCTTGACCA
GCTGCTCCCTAATCAGCATTCTNAACTTCTTTTGCTCTAACNGAAACCTG
GCTCTNCCCCGAGGGCNCTGCTTCCCCTGCAGCCCTCTACGTGAAGGCTG
CTCGTTTTCTTGTCCATACCTTAGGGCCAGGAGGTGGGGTAGGCGTCCTC
CTTGCTCCCCANTGCTACTTCCGGACCATTTCTTCCTTCCTCTTCAAAAA
CCNCAGCTCTTTGAGGCTCACATCATGTCGATNCATCACTCANTCCTGNT
NATTGCTGTCACGTACNGACCCCCGGGTCACTAGCCTC
>rnd-6_family-4998#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GTGGTTTTCAAACTGGNATACCTGTACCCTGGGCACACAAAGACTTTCCG
NGGGGTATGCGGGTATGGATAGTTTTAAGGNAATCAACTTCCAGATCCTC
AATTTCCGCATGTATCCTTCCTAAAATNAGATNTGCCTGATGAGCTCCTT
NCGGTCNGCCGNTTCTCCTTTCTCGCTTTCCCTTTCACAATCGTCCGTCT
TTCAAAAGAAAAGCTTNCCTCTCACCCATCTNAAATCTTACTGTGGTGCN
TTGCCTCGGGATGTAAAAACTCAGGGCACCAAACAAAGAGACTATCAGAG
AATNTCTCCCGAGGAGAGTCCCGTGAGAGCAAAACAGAGAAAGCTTCGGT
AAAAANTACCGAAGGGGCAACACCTTATTTCGTCCAGGTGACAGACTCAT
GGTAAGGCTCCGCGCCTTGTGGTTTCTCTGTCTACTTNNCTATCTANCTA
TCCACCTATCTATCTTAAAATTAGAATTCAGAAGTGAGATGTTGTCACGT
GGACGCGTATTAACACATTTGTTTGAATTTNAAAATGAAGTCAGACTTTT
TCTCAGAGNAGGTTAATTTGGCTGATTGGTTTGACAGTGAGGACTGGCTT
TGCCAATTAGGTTACATGGCAGACATTTTCCGTAAATTGAGTGAGCTAAA
TCTGCAGCTCCAAGGTTTTGACGAAAATATATTTAAAGCACATATNCAAT
ATNCAATACGCTGGAAATTACATCCTTTGCAATATTTAAGTGTTAACTTA
AATATGCAAGGCGGTGCATAGTTTTTAAAAGTCTTAGGAGATAAGTATGT
AAAAAATTTCAAAAAATCACTGCTG
>rnd-6_family-1676#LTR/ERV1 ( Recon Family Size = 17, Final Multiple Alignment Size = 15 )
TCATATTTGGTGCCGAAACCCGGGAATCGGGCATTCAAGGTAAACCGTGG
GCTTCGCCCAGCTGCGGCTTGAGGTCCCTGACTTTCGCTCTTGCTTTCTT
TCTCACTCTCCGCTTCGCTTTCTTTTCAAGACCCGCAGGGCATAACCTCT
GTCCGCTCGCAGCGTTATGGCTNCCGCGACAACATTGAGGGTGGCAGGGG
GATTCCCCAGGCCGCGCAGATTCAAATAACGCTTGGGTGACAGCTGACGC
CGTCCTTTGGGACATGGTGGAAACGTGATTTCCGACCGTGCAGGAGCCCA
AGGGGTTCTCTCTCTCTCTCTCGCTCTCNCTCTCTCACTGCCCCGTATGG
AACCCTCCACTACGCTTTTCCTTCCCACNTTACTCGCACAANAAGGTCTC
TTTCTCACTTCGTATCTCTGTGCCCTTTTAGGGAAGGATTTCCTGGACAT
CATTCCTAAACTGCGTCCCCGCCACTGCCAAACCCAGTGCTGCCTGTGTC
AGACAAAATCGTCAGACNCTTCCCAATTCTATCTTAGCTGCCAGACAGGG
CAAAGGATTTGGGGTTCTTCTGCTGTCTAGTCTCTCACCTCACTCGACGC
CCAGAAATTTACTATGAGAATTTCTCCACCTCCCGGCCCTCGGGCCTTGA
ACCCCGTGCCATCTTCCATAGCGCCCAACTCCAATTCCTCCAAGGGTTCC
TCTTTGCGTCTATCGGACCCCCTTCACTCCAGGCCTTGGCAGCCCACACA
CTGCTACGGACAGCCTATCGGGCTGGCCGCTACCCAGAAGCCCGAATTAT
AAACTTTGTAGATGCTCAGTCGTGAGGAATACACCCCAGCATAGGAAGAC
TTATCATAGGACATAAGCTCTATAGACAAGGGATCCCTCCTAAGGAAAGT
CCTGGCAACTGGTCTGCACTGGTTCAAATGTCCTCCCCTGGCCGCGTTGG
GGGAGACGNCTTGCGCAAGTTACCACGGAAGACCAGAGACGTCTGGTCAG
AAATCGATGGGAGAGTAGAGGACGCTCGAAACCCCATCAGGTTCGAAGGG
AATTTGGGGGACGCCCTGAACCCCTTCAGGTTAAAGCCTCCTGGTAAATG
TTTCCGGGACGCCGGATTCCATTTCTAGGAGCGCTCTCTCGTTCTCGNTT
GCAGGTTACTCAACATGGGAGGATCCCCCTCCAAGCCAGAAGAGACACCT
CTGGAGTGTATCCTTAAGAATTGGAAATTTTTTTTAAATAGAAGGGCTAA
GAAAGGAAAAACTTAAGTTCTACTGTAACGGTGCCTGGCCTTTGTATAAG
TTGGGGAATGGAGAAAAATGGCCTGAAAACGGGTCTCTAAATTACAATAC
CGTTCTGCAATTGGATCTTTATTGCCGCAGGATGGGAAAGTGGACTGAGG
TTCCCTATATTCAGGCTTTCATGGTCCTTTACCAAAATCCCGCCCTATAC
GGCTCTTGTAATTCAAAACCTGGGGAACCAGAGAACTCTCCTGACATTCT
AGACGATCCCCCTTCTAAGCTCTCCCANCTCTCAGGGGGGAAACCTAGCT
CCTCCTNCTGACAGTATCCCTACTTCTCCGGAGCCACCTACTTCTCTCGN
TCCCTCTGACCGACCCCAAACTCCGCCTCCCTATGTCCCTCCGTACCCTC
CGTTACCCCAAGAGAGGCTAGTCCTTCTGGGGTAACTCGCAGTGGAGCTT
CCTATCGCCCAGGATCAGGGAAANTACGCCCTCTTAGGGAAGTGGCANAC
GGCGAANGNACAATCAAGAGTACATGCGCCCTTCTCTTTAACCGACTTAG
CCCAATGCAAACAGAAACTGGGCCGATTTTCTGAAGACCCTAGTAAGTTC
GTCGAAGAGTTTCATGATTTAACTTGGAAGGATGTCCAAGTAATCCTATC
TACCTGCTGTACCCCTGAGGAAAAACAGAGAATCTGGACAGCAGCCCAGG
GGCACGCCGACCAGCTTGCCAGAGACCAACCCGAACATTTGCTACGGGTG
GAGATGCAGTCCCAAATCAGGAACNCNCTTGGAATTACAATAAATTCTAG
GCAGGGACAGAGGCCAGGAANCATATGATTCANTGTNTATTAGAAGGNAT
GAGAAAGTGTATCAATAAAGCCAGTCAATTATGAAAAGGTNAAAGAAGTG
ACCCAAGAGGAATGAAGAAAATCCNGCNCTCTTTCAAGGCAGCTTGTGGA
GGCTTTTAGAAAGTATACNAACGTAGATCCCTCCACTCCCGAGGGTCAGT
CCCTNCTGGGACAACGCATTTCATCAGCCAGTCCGCCCCTGATATTAGGC
GGAAACTCCAAAAGTTACAGTTGGCCCACAAACCCCCATGCCCCAACTCC
TAGATGTGGCCTTTGGGGTATTTAATAACNGAGATCAAGCTGAGGAAGAN
GAGAGAACCCGACATGAGAAAAGACAGGCCAAGGCTCACGCNAAACTGAT
AGCTGTTGCTGTCAGCCGTGCCTTGCAACCTCAGGACAACCCAAGGGGGN
CAAGAAAGTCCAACCATCAGTCTGGAGGTAAGACCAACAAGGGGGAATGC
TTCAAATGTAAGTCAACTGGCCACTGGGCCCGTGANTGCCAGAAGGAGCC
CCCCGGGCCATGCCCAGTCTGCAAACAGACAGGTCATTGGAAGAGGGACT
GCCCTCAGTCCCAAAGGGGAAGGGGGNCTCTCGCTCCTNAGATGGCCATG
CTGGACAACTGAGGCGGCCCGGGGATCCTGGCGGCTCCCCCCAACGAGAT
GTCCATCTCCGTCGAGGAGCCCCAGGTGGTCCTTGACGTGGCGGGTAAGA
AGATCGATTTTTTAATCGATACGGGAGCCACTCGCTCTGTCTTAATTTCT
CACGCTGGACCTCTTTCCTCTAAAAGCTGTANTGTGACTGGTGTCGACGG
AAAGCCTCGCGCCCGTTACTTCNCTGGGCCCCTCACTTGCCAATTTGAAC
AGTGGTCGNTTTCACATGCCTTTTTGGTTGTNCCTGAGTGTCCTACCCCA
CTACTGGGGAGAGACCTTCTGAGCTCCCTCGGGGCNATACTCGGGTTAGG
AGGCCCCGAGCAGCCCCTTATCTTGACTCTGGCTAAGACAGACCAACGCG
GAAGAGCAAGGNCCTATTCCCAGCCATATTCTACAAGCAGTGGACCTTCA
GCATGGGACAAAGGAATCCCTGGAAGGGCCATAAATGCCCAACCTGTAAG
AATTAGCCTTAGGCCAGAAGCTGCCTACCCTAACAAGAGA
>rnd-6_family-277#LINE/L2 ( Recon Family Size = 20, Final Multiple Alignment Size = 15 )
ACAGCAATTGGCTTCCCATGTGACCCAGGCCCCAGCACCACCCTCACCTC
ATTTCCCAGTGTCCCCACCATTGGCTGCTCTAGCCACAGTGGCCNCCAGC
CCTCCCTATAACTTGCCGGNCACGACCCCAGGGCACCTTGACGCTTGCTC
CTCTCTGCCTGGAACGCTCTCCTTCGNTNTCCACAGGCCGGCTCCTCACC
TCCTTCAGGTCTTNGCTCAAATGTCACCTTCTCGGGGAGGCCTTCCCCGA
CCACCCTNTTTAAGTTGCAGCCCTCCACACCCCAGCTTCAGNCCCCACCC
CTTCTTAGTTTTTTTCTCTGTGCTATTTACCAGCACCCTAACATANAATG
TATTTCGCTTGTTTATCTTATTTGTTGCCCACCTCTCGCCCACCGGAACG
CAAGCTCCATGAAGNCAGATTGTTCACCGCCGCGTCCCCAGC
>rnd-6_family-3074#LTR/ERVL-MaLR ( Recon Family Size = 18, Final Multiple Alignment Size = 15 )
AAGATGTGATTACCTTAGGGCAAAGATCAGATTAAGGGTGTNGCCTTCCC
ACCTATTGTTTCAGATGGCTTCAAGGTAGCCGCCATTAGTTGAGAGAGAG
GCGTGGGAGTGACGAGGANAGAAANAAANCAGCTTGAGAACTATGTCTAG
GAAAGAACTTGAGTGTGGTTACTGGCACATGGAACTGACTAGAAGCAAAT
AGATCAGAAAT
>rnd-6_family-6073#DNA/hAT-Charlie ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
TACCTAGGCCCCTGGGTGGCCTTCAGGGNCCGNGAACCTCCNGAAATTGT
ACGCAAATTTGCGTATNTGCGGTATGTGCATTTTTCTGGGAGAGGTGCCA
CAGCTTTCATCGGATTCTCAAAGGGNTCCATGACCCCCCGAAAATTNCGG
NATGCATATCTATNAGCACAGTGCAGA
>rnd-6_family-3897#LTR/ERVL ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
GGAAAGGGTTAACTCAGCAGGCCTGGGTTGCTCAAACCCTGCACGTTCCC
AAGAAGGGCCTGTCTTCAGGACTGGCCCTTGGCCAGCTCCTGGG
>rnd-6_family-4783#Unknown ( Recon Family Size = 16, Final Multiple Alignment Size = 15 )
AGCACAAACTAAGGTACAGGTGCTCTTGGGAATACATGAAGACCCTCCAA
AGGGTACGTCCTTTGGTGTAAGTCATTTTAGGAGCCTCACATGACGAGTC
CTCAACTTCCACAAGCGCTCGCTCATACAGCTGTCCTGTCTGAGCACATG
GACGAGGGATGCTGCCTGTTCTCCCTCTTGCTTCGCTTGCACANTCACCC
TTCTCCCACCTCNCAAAAGAAAGNCACAACTACTCACCCGTCCCGAGTCT
TNCCACNGTGCGCTGNCTCAGGGCATTGAAAACCTNCNTGGNGCACTGAA
AGGACAGTCCAAACGCTAGTATAGATGTTGAGAAAAGGGTGACTAATGAC
TGGGCAAATCGACTAGTTTCCAATTCTCTGCTTTCAACNAAATTGAAGGA
GAATCTATTCTAGTCGTCAGCCGATAGGCTATTAAAAATGATTTTATCNA
TATGATTTTTGGCATATAACCCAGAAGGNGTTTAAAAAACTGAGCGGCAC
TGCTACAACAAAACTCCCTCCGTTCCTTTNTACTTATTTATGTGAACAAG
GTTTCTCCAGGNCTACNTATATAAAATAAACACAAGAATAGAACTGATGC
TGAACCCTGNCTCATTCTAGCGATAAGTAATATTCATCCACGGATACGTG
AATTAATTGGGGAAAAAGCTCCATCGTCTCATTAAGAGNTGCATTTTCAG
TANTTTATNTTTTATGNTTCTAATAGTTATNAAATTTTNTAATAGCGTTT
GTTTTGATCAATTGTGTACTAATAACAATTGTAATGATAACTCAATCCAG
AATAAGATTTTTTAACACTTAGAACNTTATGGTCACAGGAAATTTTAAAA
ATAANTTCAATTTATATACATATTTTGGTTGCAGAAAAGTATGATAGGGT
GATCANAAAAGACTTTCAAGCATAAAAATATATTAGGATAAAATTCTGTA
GGGGAAGCGGAATGGAAATATGAATTCAAGGAGGAAAAAGAAATGAAATA
ATTTCCAACTGTTAAAGAAGAGCTTCATGTATTTTTAAAAATGATTACGG
TGGGTATCAAATCGCTATGGTATTTANATTCTACTGGATACATTTTAAAA
GCGATACAACAGTTTTATTTTTAAATGTCAATATTTACGACACCGGAAAT
TACATCCTTTGCAACTATTTAAACTATGATGAAAAATTTTAGATGCTACT
TTAAAATGTGAGGGGCACACATATTTTCCAAAANAATTTTTGGGGTCCAC
AAGCAAAAAATTTGGAG